Pharmacolibrary test using OpenModelica

Total Frontend Backend SimCode Templates Compilation Simulation Verification
90 70 70 70 70 70 69 0

Test started: 2026-08-29 15:42:34
Total time taken: 0:14:42
System info: ryzen-5950x-1: AMD Ryzen 9 5950X 16-Core Processor, 63 GB RAM, Ubuntu 26.04.1 LTS

OpenModelica Version: OMCompiler v1.28.0-dev.498+g0a491ef158
OpenModelicaLibraryTesting Changes

CommitDateAuthorSummary
b5363912026-08-28 21:36:43 +0200Martin SjölundRun master, cvode, gbode and ida as one job (#342)

Tested Library: Pharmacolibrary 25.09

{
 "path": "Pharmacolibrary",
 "support": "fullSupport",
 "uses": {
  "Modelica": "4.0.0"
 },
 "version": "25.9.0",
 "zipfile": "https://github.com/creative-connections/Pharmacolibrary/archive/de5fc7280ddaefacbac29ec6e89daea657dd2bbc.zip"
}

BuildModel time limit: 660s
Simulation time limit: 480s
Default tolerance: 1e-06
Default number of intervals: 2500
Optimization level: Tool default

Flags:
setCommandLineOptions("-d=nogen");
setCommandLineOptions("-d=initialization");
setCommandLineOptions("-d=backenddaeinfo");
setCommandLineOptions("-d=discreteinfo");
setCommandLineOptions("-d=stateselection");
setCommandLineOptions("-d=execstat");
setMatchingAlgorithm("PFPlusExt");
setIndexReductionMethod("dynamicStateSelection");
Config:
{
 "library": "Pharmacolibrary"
}

Links are provided if getErrorString() or the simulation generates output. The links are coded with red if there were errors, yellow if there were warnings, and normal links if there are only notifications.

ModelVerifiedSimulateTotal buildModelParsingFrontendBackendSimCodeTemplatesCompileTotal Execution
Pharmacolibrary.DevModels.PKOneCompartmentModelPeriodic (sim) 0.092.395.730.010.010.010.022.359.10
Pharmacolibrary.DevModels.PKTwoCompartmentModel (sim) 0.032.385.610.010.020.010.022.338.70
Pharmacolibrary.DevModels.PKTwoCompartmentModelComparison (sim) 0.042.455.660.010.030.010.032.378.84
Pharmacolibrary.DevModels.PKTwoCompartmentModelOral (sim) 0.032.355.690.010.020.010.022.308.78
Pharmacolibrary.DevModels.PKWholeBodyModel 0.000.025.700.020.000.000.000.006.34
Pharmacolibrary.DevModels.Palivizumab.PKTwoCompartmentPalivizumab (sim) 0.032.345.720.010.020.010.022.298.79
Pharmacolibrary.DevModels.Palivizumab.ViralInfectionDynamics1 (sim) 0.022.225.620.000.010.000.012.208.52
Pharmacolibrary.DevModels.Palivizumab.ViralInfectionDynamics2 0.000.055.610.050.000.000.000.006.31
Pharmacolibrary.DevModels.Paracetamol.AcetaminophenEquations (sim) 0.022.225.690.010.010.000.012.198.55
Pharmacolibrary.DevModels.Paracetamol.ParacetamolComponents 0.000.025.720.020.000.000.000.006.37
Pharmacolibrary.DevModels.Paracetamol.ParacetamolEquations2 (sim) 0.032.235.650.000.000.000.012.208.55
Pharmacolibrary.DevModels.Remdesivir.ComponentRemdesivirPK 0.000.025.710.020.000.000.000.006.37
Pharmacolibrary.DevModels.Remdesivir.ComponentRemdesivirPKPD 0.000.025.660.020.000.000.000.006.31
Pharmacolibrary.DevModels.Remdesivir.Eq10RemdesivirPK (sim) 0.072.345.650.010.010.000.022.308.81
Pharmacolibrary.DevModels.SingleCompartment.GentamicinePK 0.000.025.590.020.000.000.000.006.26
Pharmacolibrary.DevModels.SingleCompartment.LithiumPK 0.000.035.640.030.000.000.000.006.31
Pharmacolibrary.DevModels.SingleCompartment.PBPKModel 0.000.025.790.020.000.000.000.006.47
Pharmacolibrary.DevModels.SingleCompartment.ParacetamolPK 0.000.025.710.020.000.000.000.006.38
Pharmacolibrary.DevModels.SingleCompartment.RemdesivirPK 0.000.025.750.020.000.000.000.006.37
Pharmacolibrary.DevModels.SingleCompartment.TheopyllinePK 0.000.025.700.020.000.000.000.006.33
Pharmacolibrary.DevModels.SingleDoseArteryTissuePeripheral 0.000.025.770.020.000.000.000.006.39
Pharmacolibrary.DevModels.SingleDoseArteryTissuePeripheralElimination 0.000.035.710.030.000.000.000.006.35
Pharmacolibrary.DevModels.SingleDoseArteryTissueVenous 0.000.045.710.040.000.000.000.006.43
Pharmacolibrary.DevModels.SingleDoseDiffusion (sim) 0.822.345.880.010.020.010.022.2911.20
Pharmacolibrary.DevModels.SingleDoseIAFloxuridine 0.000.035.890.030.000.000.000.006.59
Pharmacolibrary.DevModels.SingleDoseIVAmiodarone 0.000.025.740.020.000.000.000.006.41
Pharmacolibrary.DevModels.SingleDoseIVAmiodaroneEquations 0.000.025.760.020.000.000.000.006.47
Pharmacolibrary.DevModels.SingleDoseIntravenousWholeBody (sim) 0.043.205.750.030.070.020.063.029.74
Pharmacolibrary.DevModels.SingleDoseLumen (sim) 0.812.265.820.010.020.010.022.2010.89
Pharmacolibrary.DevModels.SingleDoseVeinsGutSpleenPortalVeinLiver (sim) 0.942.625.740.010.030.010.032.5511.90
Pharmacolibrary.DevModels.Systems.PKOneCompartmentEquations (sim) 0.082.026.170.010.010.000.022.008.96
Pharmacolibrary.Drugs.B_BloodAndBloodFormingOrgans.B01A_AntithromboticAgents.B01AB05_Enoxaparin.Enoxaparin (sim) 0.082.275.750.010.010.000.022.228.99
Pharmacolibrary.Drugs.C_CardiovascularSystem.C01A_CardiacGlycosides.C01AA05_Digoxin.Digoxin_1 (sim) 0.092.355.800.020.030.010.042.269.21
Pharmacolibrary.Drugs.C_CardiovascularSystem.C01A_CardiacGlycosides.C01AA05_Digoxin.Digoxin_IV (sim) 0.102.245.680.010.030.010.032.169.07
Pharmacolibrary.Drugs.J_AntiinfectivesForSystemicUse.J05A_DirectActingAntivirals.J05AB16_Remdesivir.Remdesivir_2C_metabolites (sim) 1.232.625.650.020.040.010.042.5115.04
Pharmacolibrary.Drugs.J_AntiinfectivesForSystemicUse.J06B_Immunoglobulins.J06BD01_Palivizumab.Palivizumab_IM (sim) 0.182.375.760.010.020.010.022.329.73
Pharmacolibrary.Drugs.J_AntiinfectivesForSystemicUse.J06B_Immunoglobulins.J06BD08_Nirsevimab.Nirsevimab_IM (sim) 0.432.575.680.010.030.010.032.4910.80
Pharmacolibrary.Drugs.L_AntineoplasticAndImmunomodulatingAgents.L01B_Antimetabolites.L01BC02_Fluorouracil.Fluorouracil_1C (sim) 0.092.265.690.010.010.010.032.218.99
Pharmacolibrary.Drugs.M_MusculoSkeletalSystem.M01A_AntiinflammatoryAndAntirheumaticProductsNonStero.M01AE01_Ibuprofen.Ibuprofen (sim) 0.122.315.780.010.020.010.032.259.25
Pharmacolibrary.Drugs.N_NervousSystem.N02A_Opioids.N02AB03_Fentanyl.Fentanyl_3C (sim) 0.112.395.770.010.020.010.022.339.24
Pharmacolibrary.Drugs.N_NervousSystem.N02B_OtherAnalgesicsAndAntipyretics.N02BE01_Paracetamol.Comparison_healthy_SMA 0.000.775.700.770.000.000.000.007.14
Pharmacolibrary.Drugs.N_NervousSystem.N02B_OtherAnalgesicsAndAntipyretics.N02BE01_Paracetamol.Paracetamol_SMA (sim) 0.092.255.780.010.010.010.022.219.03
Pharmacolibrary.Drugs.N_NervousSystem.N02B_OtherAnalgesicsAndAntipyretics.N02BE01_Paracetamol.Paracetamol_healthy 0.000.585.710.580.000.000.000.006.99
Pharmacolibrary.Drugs.N_NervousSystem.N02B_OtherAnalgesicsAndAntipyretics.N02BE01_Paracetamol.Paracetamol_healthy_oral (sim) 0.112.365.740.010.030.010.032.289.21
Pharmacolibrary.Drugs.N_NervousSystem.N02B_OtherAnalgesicsAndAntipyretics.N02BE01_Paracetamol.Paracetamol_metabolites (sim) 0.062.415.640.010.030.010.032.338.95
Pharmacolibrary.Drugs.N_NervousSystem.N05A_Antipsychotics.N05AN01_Lithium.Lithium (sim) 0.112.315.730.010.020.010.022.269.14
Pharmacolibrary.Drugs.N_NervousSystem.N05C_HypnoticsAndSedatives.N05CD08_Midazolam.Midazolam_2C (sim) 0.092.265.740.010.020.010.022.219.04
Pharmacolibrary.Drugs.N_NervousSystem.N06B_PsychostimulantsAgentsUsedForAdhdAndNootropics.N06BC01_Caffeine.Caffeine (sim) 0.272.255.640.010.020.010.022.199.36
Pharmacolibrary.Drugs.Z_Unclassified.J06B_ProbableImmunoglobulins.DZIF10c.DZIF10c_1C (sim) 0.062.335.660.010.020.010.022.278.77
Pharmacolibrary.Drugs.Z_Unclassified.J06B_ProbableImmunoglobulins.MHAA459A.MHAA459A_2C (sim) 0.142.465.680.010.030.010.032.389.36
Pharmacolibrary.Examples.PBPK_OralDoseGUTWholeBody (sim) 0.053.455.910.030.090.020.063.2310.16
Pharmacolibrary.Examples.PBPK_SingleDoseVenousArteryTissue (sim) 0.032.525.990.010.020.010.022.469.34
Pharmacolibrary.Examples.PKOneCompartmentModel (sim) 0.102.567.100.010.020.010.032.4910.95
Pharmacolibrary.Examples.PKOneCompartmentModelPeriodic (sim) 0.092.486.140.010.010.010.022.439.67
Pharmacolibrary.Examples.PKOneCompartmentSimplestModel (sim) 0.032.378.440.010.010.010.022.3311.63
Pharmacolibrary.Examples.PKPD_Midazolam (sim) 0.082.638.120.010.020.010.032.5511.80
Pharmacolibrary.Examples.PKPD_integration.PKPD_HemodynamicsMeurs_flatNorm (sim) 11.847.605.771.290.310.060.185.7763.13
Pharmacolibrary.Examples.PKPG_1C_Gentamicin (sim) 0.312.496.110.010.020.010.032.4210.48
Pharmacolibrary.Examples.PKPG_1C_GentamicineEquation (sim) 0.022.346.000.010.010.000.022.309.05
Pharmacolibrary.Examples.PKThreeCompartmentModel (sim) 0.032.646.210.010.020.010.022.599.65
Pharmacolibrary.Examples.PKTwoCompartmentModel (sim) 0.032.456.470.010.020.010.022.409.69
Pharmacolibrary.Examples.PK_1C_Digoxin (sim) 0.092.425.920.010.010.010.022.389.36
Pharmacolibrary.Examples.PK_1C_Gentamicin (sim) 0.112.636.040.010.020.010.022.579.87
Pharmacolibrary.Examples.PK_1C_GentamicinEquations (sim) 0.022.407.750.010.010.000.022.3710.97
Pharmacolibrary.Examples.PK_1C_GentamicinEquations2 (sim) 0.022.155.990.010.010.000.012.138.87
Pharmacolibrary.Examples.PK_1C_GentamicineSimple (sim) 0.032.378.180.010.010.010.022.3311.36
Pharmacolibrary.Examples.PK_1C_Lithium2 (sim) 0.112.355.910.010.020.010.022.299.35
Pharmacolibrary.Examples.PK_1C_LithiumCarbonate (sim) 0.632.526.120.010.010.010.022.4712.67
Pharmacolibrary.Examples.PK_2C_IVMidazolam (sim) 0.072.606.020.010.030.010.032.529.61
Pharmacolibrary.Examples.PK_3C_FentanylIV (sim) 0.032.627.590.010.020.010.022.5611.01
Pharmacolibrary.Examples.PK_Caffeine.PK_population_Caffeine (sim) 0.032.755.720.020.050.010.042.639.24
Pharmacolibrary.Examples.PK_Lithium.PGx_experiment (sim) 0.033.515.810.040.100.030.073.2710.10
Pharmacolibrary.Examples.PK_Lithium.PK_1C_Lithium (sim) 0.112.395.840.010.030.010.032.329.33
Pharmacolibrary.Examples.PK_Lithium.PK_1C_Lithium_CI (sim) 0.182.795.820.020.040.010.042.6810.06
Pharmacolibrary.Examples.Paracetamol_Experiment (sim) 0.042.695.690.020.040.010.042.589.18
Pharmacolibrary.Examples.Pharmacogenomics.PKPG_2C_generic (sim) 0.854.405.920.050.200.050.383.7115.80
Pharmacolibrary.Examples.Pharmacogenomics.PKPG_Gentamicin_Experiment (sim) 0.042.995.890.020.070.020.052.839.67
Pharmacolibrary.Examples.Pharmacogenomics.PKPG_Lithium_Experiment (sim) 0.593.195.940.030.090.030.062.9912.50
Pharmacolibrary.Examples.Pharmacogenomics.PK_2C_generic (sim) 0.063.716.110.050.140.040.093.4010.75
Pharmacolibrary.Examples.Pharmacogenomics.PK_2C_single (sim) 0.032.426.020.010.020.010.022.369.20
Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_1C_Gentamicin (sim) 0.172.485.920.010.030.010.032.409.90
Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_1C_Lithium (sim) 1.632.585.800.010.020.010.022.5217.48
Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_2C_Ibuprofen (sim) 0.202.625.970.020.040.010.042.5110.25
Pharmacolibrary.Examples.Pharmacogenomics.Patient_PK_2C_Ibuprofen (sim) 0.122.435.900.010.020.010.032.369.56
Pharmacolibrary.Pharmacogenomics.PGx.GenotypePhenotypeComponent 0.000.025.730.020.000.000.000.006.40
Pharmacolibrary.Pharmacokinetic.Models.PBPK_whole_body (sim) 0.044.045.800.040.290.030.093.5910.57
Pharmacolibrary.Pharmacokinetic.Models.PK_1C (sim) 0.092.315.930.010.010.000.022.269.28
Pharmacolibrary.Pharmacokinetic.Models.PK_2C (sim) 0.102.395.730.010.020.010.022.349.20
Pharmacolibrary.Pharmacokinetic.Models.PK_2C_enteral (sim) 0.122.385.760.020.030.010.032.299.35
Pharmacolibrary.Pharmacokinetic.Models.PK_3C_enteral (sim) 0.182.415.660.010.020.010.032.349.36