Environment - simulationEnvironment:
startTime=0
stopTime=86400
tolerance=1e-06
numberOfIntervals=500
stepSize=172.8
Regular simulation (gbode: the generic bi-rate ODE solver, with the radauIIA3 method): ./Pharmacolibrary_Pharmacolibrary.Examples.PK_Caffeine.PK_population_Caffeine -abortSlowSimulation -alarm=240  -lv LOG_STATS -s gbode -gbm=radauIIA3
LOG_STDOUT        | warning | Numerical Jacobians without coloring are currently not supported by GBODE. Colored numerical Jacobian will be used.
LOG_SUCCESS       | info    | The initialization finished successfully without homotopy method.
LOG_ASSERT        | info    | [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/Interfaces/PartialCompartment.mo:9:3-9:108:writable]
|                 | |       | The following assertion has been violated at time 654.621946
|                 | |       | ((green_tee_drinker.periodicDose.absorptionLumen.C >= -1e-9)) --> "Variable violating min constraint: -1e-9 <= green_tee_drinker.periodicDose.absorptionLumen.C, has value: -1.24803e-08"
LOG_ASSERT        | info    | [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/Interfaces/PartialCompartment.mo:18:3-18:49:writable]
|                 | |       | The following assertion has been violated at time 654.621946
|                 | |       | ((green_tee_drinker.periodicDose.absorptionLumen.M >= -1e-12)) --> "Variable violating min constraint: -1e-12 <= green_tee_drinker.periodicDose.absorptionLumen.M, has value: -1.24803e-08"
LOG_ASSERT        | info    | [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/Interfaces/PartialCompartment.mo:21:3-21:56:writable]
|                 | |       | The following assertion has been violated at time 654.621946
|                 | |       | ((green_tee_drinker.periodicDose.absorptionLumen.Cmin >= -1e-9)) --> "Variable violating min constraint: -1e-9 <= green_tee_drinker.periodicDose.absorptionLumen.Cmin, has value: -1.24803e-08"
LOG_ASSERT        | info    | [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/Interfaces/PartialDrugSource.mo:6:9-6:96:writable]
|                 | |       | The following assertion has been violated at time 654.621946
|                 | |       | ((green_tee_drinker.periodicDose.variableDose.TotalCumulativeMass >= -1e-12)) --> "Variable violating min constraint: -1e-12 <= green_tee_drinker.periodicDose.variableDose.TotalCumulativeMass, has value: -1.21669e-08"
LOG_ASSERT        | info    | [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/Interfaces/PartialCompartment.mo:9:3-9:108:writable]
|                 | |       | The following assertion has been violated at time 654.621946
|                 | |       | ((black_tea_drinker.periodicDose.absorptionLumen.C >= -1e-9)) --> "Variable violating min constraint: -1e-9 <= black_tea_drinker.periodicDose.absorptionLumen.C, has value: -1.89095e-08"
LOG_ASSERT        | info    | [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/Interfaces/PartialCompartment.mo:18:3-18:49:writable]
|                 | |       | The following assertion has been violated at time 654.621946
|                 | |       | ((black_tea_drinker.periodicDose.absorptionLumen.M >= -1e-12)) --> "Variable violating min constraint: -1e-12 <= black_tea_drinker.periodicDose.absorptionLumen.M, has value: -1.89095e-08"
LOG_ASSERT        | info    | [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/Interfaces/PartialCompartment.mo:21:3-21:56:writable]
|                 | |       | The following assertion has been violated at time 654.621946
|                 | |       | ((black_tea_drinker.periodicDose.absorptionLumen.Cmin >= -1e-9)) --> "Variable violating min constraint: -1e-9 <= black_tea_drinker.periodicDose.absorptionLumen.Cmin, has value: -1.89095e-08"
LOG_ASSERT        | info    | [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/Interfaces/PartialDrugSource.mo:6:9-6:96:writable]
|                 | |       | The following assertion has been violated at time 654.621946
|                 | |       | ((black_tea_drinker.periodicDose.variableDose.TotalCumulativeMass >= -1e-12)) --> "Variable violating min constraint: -1e-12 <= black_tea_drinker.periodicDose.variableDose.TotalCumulativeMass, has value: -1.84346e-08"
LOG_ASSERT        | info    | [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/Interfaces/PartialCompartment.mo:9:3-9:108:writable]
|                 | |       | The following assertion has been violated at time 654.621946
|                 | |       | ((coffee_drinker.periodicDose.absorptionLumen.C >= -1e-9)) --> "Variable violating min constraint: -1e-9 <= coffee_drinker.periodicDose.absorptionLumen.C, has value: -3.59281e-08"
LOG_ASSERT        | info    | [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/Interfaces/PartialCompartment.mo:18:3-18:49:writable]
|                 | |       | The following assertion has been violated at time 654.621946
|                 | |       | ((coffee_drinker.periodicDose.absorptionLumen.M >= -1e-12)) --> "Variable violating min constraint: -1e-12 <= coffee_drinker.periodicDose.absorptionLumen.M, has value: -3.59281e-08"
LOG_ASSERT        | info    | [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/Interfaces/PartialCompartment.mo:21:3-21:56:writable]
|                 | |       | The following assertion has been violated at time 654.621946
|                 | |       | ((coffee_drinker.periodicDose.absorptionLumen.Cmin >= -1e-9)) --> "Variable violating min constraint: -1e-9 <= coffee_drinker.periodicDose.absorptionLumen.Cmin, has value: -3.59281e-08"
LOG_ASSERT        | info    | [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/Interfaces/PartialDrugSource.mo:6:9-6:96:writable]
|                 | |       | The following assertion has been violated at time 654.621946
|                 | |       | ((coffee_drinker.periodicDose.variableDose.TotalCumulativeMass >= -1e-12)) --> "Variable violating min constraint: -1e-12 <= coffee_drinker.periodicDose.variableDose.TotalCumulativeMass, has value: -3.50258e-08"
LOG_ASSERT        | info    | [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/Interfaces/PartialCompartment.mo:18:3-18:49:writable]
|                 | |       | The following assertion has been violated at time 660.000000
|                 | |       | ((green_tee_drinker.central.M >= -1e-12)) --> "Variable violating min constraint: -1e-12 <= green_tee_drinker.central.M, has value: -1.24541e-11"
LOG_ASSERT        | info    | [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/Interfaces/PartialDrugSource.mo:6:9-6:96:writable]
|                 | |       | The following assertion has been violated at time 660.000000
|                 | |       | ((green_tee_drinker.periodicDose.TotalCumulativeMass >= -1e-12)) --> "Variable violating min constraint: -1e-12 <= green_tee_drinker.periodicDose.TotalCumulativeMass, has value: -1.21799e-11"
LOG_ASSERT        | info    | [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/Interfaces/PartialCompartment.mo:18:3-18:49:writable]
|                 | |       | The following assertion has been violated at time 660.000000
|                 | |       | ((black_tea_drinker.central.M >= -1e-12)) --> "Variable violating min constraint: -1e-12 <= black_tea_drinker.central.M, has value: -1.88698e-11"
LOG_ASSERT        | info    | [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/Interfaces/PartialDrugSource.mo:6:9-6:96:writable]
|                 | |       | The following assertion has been violated at time 660.000000
|                 | |       | ((black_tea_drinker.periodicDose.TotalCumulativeMass >= -1e-12)) --> "Variable violating min constraint: -1e-12 <= black_tea_drinker.periodicDose.TotalCumulativeMass, has value: -1.84545e-11"
LOG_ASSERT        | info    | [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/Interfaces/PartialCompartment.mo:9:3-9:108:writable]
|                 | |       | The following assertion has been violated at time 660.000000
|                 | |       | ((coffee_drinker.central.C >= -1e-9)) --> "Variable violating min constraint: -1e-9 <= coffee_drinker.central.C, has value: -1.02436e-09"
LOG_ASSERT        | info    | [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/Interfaces/PartialCompartment.mo:18:3-18:49:writable]
|                 | |       | The following assertion has been violated at time 660.000000
|                 | |       | ((coffee_drinker.central.M >= -1e-12)) --> "Variable violating min constraint: -1e-12 <= coffee_drinker.central.M, has value: -3.58526e-11"
LOG_ASSERT        | info    | [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/Interfaces/PartialDrugSource.mo:6:9-6:96:writable]
|                 | |       | The following assertion has been violated at time 660.000000
|                 | |       | ((coffee_drinker.periodicDose.TotalCumulativeMass >= -1e-12)) --> "Variable violating min constraint: -1e-12 <= coffee_drinker.periodicDose.TotalCumulativeMass, has value: -3.50635e-11"
LOG_ASSERT        | info    | [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/Interfaces/PartialCompartment.mo:9:3-9:108:writable]
|                 | |       | The following assertion has been violated at time 660.630311
|                 | |       | ((green_tee_drinker.central.C >= -1e-9)) --> "Variable violating min constraint: -1e-9 <= green_tee_drinker.central.C, has value: -1.19458e-09"
LOG_ASSERT        | info    | [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/Interfaces/PartialCompartment.mo:21:3-21:56:writable]
|                 | |       | The following assertion has been violated at time 660.630311
|                 | |       | ((green_tee_drinker.central.Cmin >= -1e-9)) --> "Variable violating min constraint: -1e-9 <= green_tee_drinker.central.Cmin, has value: -1.19458e-09"
LOG_ASSERT        | info    | [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/Interfaces/PartialCompartment.mo:9:3-9:108:writable]
|                 | |       | The following assertion has been violated at time 660.630311
|                 | |       | ((black_tea_drinker.central.C >= -1e-9)) --> "Variable violating min constraint: -1e-9 <= black_tea_drinker.central.C, has value: -1.80997e-09"
LOG_ASSERT        | info    | [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/Interfaces/PartialCompartment.mo:21:3-21:56:writable]
|                 | |       | The following assertion has been violated at time 660.630311
|                 | |       | ((black_tea_drinker.central.Cmin >= -1e-9)) --> "Variable violating min constraint: -1e-9 <= black_tea_drinker.central.Cmin, has value: -1.80997e-09"
LOG_ASSERT        | info    | [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/Interfaces/PartialCompartment.mo:21:3-21:56:writable]
|                 | |       | The following assertion has been violated at time 660.630311
|                 | |       | ((coffee_drinker.central.Cmin >= -1e-9)) --> "Variable violating min constraint: -1e-9 <= coffee_drinker.central.Cmin, has value: -3.43894e-09"
LOG_STATS         | info    | gbode (single-rate integration): radauIIA3
LOG_STATS         | info    | ### STATISTICS ###
|                 | |       | | timer
|                 | |       | | |   0.00211818s          reading init.xml
|                 | |       | | |  0.000222288s          reading info.xml
|                 | |       | | |  0.000103354s [  6.9%] pre-initialization
|                 | |       | | |   4.6688e-05s [  3.1%] initialization
|                 | |       | | |    6.042e-06s [  0.4%] steps
|                 | |       | | |            0s [  0.0%] solver (excl. callbacks)
|                 | |       | | |            0s [  0.0%] creating output-file
|                 | |       | | |   3.6561e-05s [  2.4%] event-handling
|                 | |       | | |   2.7801e-05s [  1.8%] overhead
|                 | |       | | |   0.00128287s [ 85.3%] simulation
|                 | |       | | |   0.00150332s [100.0%] total
|                 | |       | | events
|                 | |       | | |    13 state events
|                 | |       | | |     0 time events
|                 | |       | | solver: gbode
|                 | |       | | |    99 steps taken
|                 | |       | | |   385 calls of functionODE
|                 | |       | | |    14 evaluations of jacobian
|                 | |       | | |     2 error test failures
|                 | |       | | |     0 convergence test failures
|                 | |       | | | 8.238e-06s time of jacobian evaluation
LOG_SUCCESS       | info    | The simulation finished successfully.