Pharmacolibrary test using OpenModelica

Total Frontend Backend SimCode Templates Compilation Simulation Verification
90 70 70 70 70 70 69 0

Test started: 2026-09-02 14:43:34
Total time taken: 0:14:19
System info: ryzen-5950x-2: AMD Ryzen 9 5950X 16-Core Processor, 63 GB RAM, Ubuntu 26.04.1 LTS

OpenModelica Version: OMCompiler v1.28.0-dev.562+g5c0a3ff588
OpenModelicaLibraryTesting Changes

CommitDateAuthorSummary
1e915f22026-09-02 11:38:48 +0200Martin SjölundBuild omc for x86-64-v3, not -march=native

Tested Library: Pharmacolibrary 25.09

{
 "path": "Pharmacolibrary",
 "support": "fullSupport",
 "uses": {
  "Modelica": "4.0.0"
 },
 "version": "25.9.0",
 "zipfile": "https://github.com/creative-connections/Pharmacolibrary/archive/de5fc7280ddaefacbac29ec6e89daea657dd2bbc.zip"
}

BuildModel time limit: 660s
Simulation time limit: 240s
Default tolerance: 1e-06
Default number of intervals: 2500
Optimization level: Tool default

Flags:
setCommandLineOptions("-d=nogen");
setCommandLineOptions("-d=initialization");
setCommandLineOptions("-d=backenddaeinfo");
setCommandLineOptions("-d=discreteinfo");
setCommandLineOptions("-d=stateselection");
setCommandLineOptions("-d=execstat");
setMatchingAlgorithm("PFPlusExt");
setIndexReductionMethod("dynamicStateSelection");
Config:
{
 "library": "Pharmacolibrary"
}

Links are provided if getErrorString() or the simulation generates output. The links are coded with red if there were errors, yellow if there were warnings, and normal links if there are only notifications.

ModelVerifiedSimulateTotal buildModelParsingFrontendBackendSimCodeTemplatesCompileTotal Execution
Pharmacolibrary.DevModels.PKOneCompartmentModelPeriodic (sim) 0.122.205.660.010.010.000.022.168.58
Pharmacolibrary.DevModels.PKTwoCompartmentModel (sim) 0.032.235.740.010.010.010.022.188.63
Pharmacolibrary.DevModels.PKTwoCompartmentModelComparison (sim) 0.052.485.710.010.030.010.022.418.93
Pharmacolibrary.DevModels.PKTwoCompartmentModelOral (sim) 0.042.325.770.010.020.010.022.278.73
Pharmacolibrary.DevModels.PKWholeBodyModel 0.000.025.640.020.000.000.000.006.35
Pharmacolibrary.DevModels.Palivizumab.PKTwoCompartmentPalivizumab (sim) 0.032.245.750.010.020.010.022.198.62
Pharmacolibrary.DevModels.Palivizumab.ViralInfectionDynamics1 (sim) 0.022.115.770.000.000.000.012.088.51
Pharmacolibrary.DevModels.Palivizumab.ViralInfectionDynamics2 0.000.055.710.050.000.000.000.006.42
Pharmacolibrary.DevModels.Paracetamol.AcetaminophenEquations (sim) 0.022.095.700.010.010.000.012.068.42
Pharmacolibrary.DevModels.Paracetamol.ParacetamolComponents 0.000.025.780.020.000.000.000.006.50
Pharmacolibrary.DevModels.Paracetamol.ParacetamolEquations2 (sim) 0.032.075.840.010.010.000.022.038.56
Pharmacolibrary.DevModels.Remdesivir.ComponentRemdesivirPK 0.000.025.830.020.000.000.000.006.48
Pharmacolibrary.DevModels.Remdesivir.ComponentRemdesivirPKPD 0.000.025.730.020.000.000.000.006.40
Pharmacolibrary.DevModels.Remdesivir.Eq10RemdesivirPK (sim) 0.072.345.730.010.010.000.022.308.72
Pharmacolibrary.DevModels.SingleCompartment.GentamicinePK 0.000.025.610.020.000.000.000.006.30
Pharmacolibrary.DevModels.SingleCompartment.LithiumPK 0.000.025.810.020.000.000.000.006.49
Pharmacolibrary.DevModels.SingleCompartment.PBPKModel 0.000.035.730.030.000.000.000.006.42
Pharmacolibrary.DevModels.SingleCompartment.ParacetamolPK 0.000.025.630.020.000.000.000.006.25
Pharmacolibrary.DevModels.SingleCompartment.RemdesivirPK 0.000.025.870.020.000.000.000.006.64
Pharmacolibrary.DevModels.SingleCompartment.TheopyllinePK 0.000.025.680.020.000.000.000.006.31
Pharmacolibrary.DevModels.SingleDoseArteryTissuePeripheral 0.000.025.780.020.000.000.000.006.49
Pharmacolibrary.DevModels.SingleDoseArteryTissuePeripheralElimination 0.000.025.800.020.000.000.000.006.52
Pharmacolibrary.DevModels.SingleDoseArteryTissueVenous 0.000.025.920.020.000.000.000.006.59
Pharmacolibrary.DevModels.SingleDoseDiffusion (sim) 0.912.445.660.010.020.010.022.399.66
Pharmacolibrary.DevModels.SingleDoseIAFloxuridine 0.000.025.790.020.000.000.000.006.43
Pharmacolibrary.DevModels.SingleDoseIVAmiodarone 0.000.025.690.020.000.000.000.006.38
Pharmacolibrary.DevModels.SingleDoseIVAmiodaroneEquations 0.000.025.710.020.000.000.000.006.34
Pharmacolibrary.DevModels.SingleDoseIntravenousWholeBody (sim) 0.043.035.710.020.080.020.062.849.35
Pharmacolibrary.DevModels.SingleDoseLumen (sim) 0.802.495.820.010.020.010.022.439.71
Pharmacolibrary.DevModels.SingleDoseVeinsGutSpleenPortalVeinLiver (sim) 1.252.715.990.010.030.010.032.6310.57
Pharmacolibrary.DevModels.Systems.PKOneCompartmentEquations (sim) 0.052.125.770.010.010.000.012.098.57
Pharmacolibrary.Drugs.B_BloodAndBloodFormingOrgans.B01A_AntithromboticAgents.B01AB05_Enoxaparin.Enoxaparin (sim) 0.202.285.760.010.010.000.022.248.84
Pharmacolibrary.Drugs.C_CardiovascularSystem.C01A_CardiacGlycosides.C01AA05_Digoxin.Digoxin_1 (sim) 0.142.345.720.010.020.010.032.288.79
Pharmacolibrary.Drugs.C_CardiovascularSystem.C01A_CardiacGlycosides.C01AA05_Digoxin.Digoxin_IV (sim) 0.132.355.700.010.010.010.022.308.77
Pharmacolibrary.Drugs.J_AntiinfectivesForSystemicUse.J05A_DirectActingAntivirals.J05AB16_Remdesivir.Remdesivir_2C_metabolites (sim) 1.942.605.710.020.040.010.032.5010.84
Pharmacolibrary.Drugs.J_AntiinfectivesForSystemicUse.J06B_Immunoglobulins.J06BD01_Palivizumab.Palivizumab_IM (sim) 0.282.355.630.010.020.010.032.298.83
Pharmacolibrary.Drugs.J_AntiinfectivesForSystemicUse.J06B_Immunoglobulins.J06BD08_Nirsevimab.Nirsevimab_IM (sim) 0.662.295.800.010.020.010.022.239.36
Pharmacolibrary.Drugs.L_AntineoplasticAndImmunomodulatingAgents.L01B_Antimetabolites.L01BC02_Fluorouracil.Fluorouracil_1C (sim) 0.142.195.670.010.010.000.022.158.61
Pharmacolibrary.Drugs.M_MusculoSkeletalSystem.M01A_AntiinflammatoryAndAntirheumaticProductsNonStero.M01AE01_Ibuprofen.Ibuprofen (sim) 0.162.335.740.010.020.010.022.288.83
Pharmacolibrary.Drugs.N_NervousSystem.N02A_Opioids.N02AB03_Fentanyl.Fentanyl_3C (sim) 0.142.415.650.010.020.010.022.358.77
Pharmacolibrary.Drugs.N_NervousSystem.N02B_OtherAnalgesicsAndAntipyretics.N02BE01_Paracetamol.Comparison_healthy_SMA 0.000.635.860.630.000.000.000.007.11
Pharmacolibrary.Drugs.N_NervousSystem.N02B_OtherAnalgesicsAndAntipyretics.N02BE01_Paracetamol.Paracetamol_SMA (sim) 0.122.275.720.010.010.000.022.238.72
Pharmacolibrary.Drugs.N_NervousSystem.N02B_OtherAnalgesicsAndAntipyretics.N02BE01_Paracetamol.Paracetamol_healthy 0.000.615.620.610.000.000.000.006.93
Pharmacolibrary.Drugs.N_NervousSystem.N02B_OtherAnalgesicsAndAntipyretics.N02BE01_Paracetamol.Paracetamol_healthy_oral (sim) 0.152.235.730.010.020.010.022.188.71
Pharmacolibrary.Drugs.N_NervousSystem.N02B_OtherAnalgesicsAndAntipyretics.N02BE01_Paracetamol.Paracetamol_metabolites (sim) 0.072.385.590.010.020.010.022.328.62
Pharmacolibrary.Drugs.N_NervousSystem.N05A_Antipsychotics.N05AN01_Lithium.Lithium (sim) 0.162.305.670.010.020.010.022.258.75
Pharmacolibrary.Drugs.N_NervousSystem.N05C_HypnoticsAndSedatives.N05CD08_Midazolam.Midazolam_2C (sim) 0.142.425.730.010.030.010.032.348.93
Pharmacolibrary.Drugs.N_NervousSystem.N06B_PsychostimulantsAgentsUsedForAdhdAndNootropics.N06BC01_Caffeine.Caffeine (sim) 0.232.315.670.010.020.010.032.248.82
Pharmacolibrary.Drugs.Z_Unclassified.J06B_ProbableImmunoglobulins.DZIF10c.DZIF10c_1C (sim) 0.042.415.720.010.020.010.032.358.76
Pharmacolibrary.Drugs.Z_Unclassified.J06B_ProbableImmunoglobulins.MHAA459A.MHAA459A_2C (sim) 0.292.355.680.010.020.010.022.308.94
Pharmacolibrary.Examples.PBPK_OralDoseGUTWholeBody (sim) 0.073.428.400.060.090.020.063.1912.59
Pharmacolibrary.Examples.PBPK_SingleDoseVenousArteryTissue (sim) 0.032.298.450.010.020.010.022.2411.39
Pharmacolibrary.Examples.PKOneCompartmentModel (sim) 0.192.985.890.010.010.010.022.939.74
Pharmacolibrary.Examples.PKOneCompartmentModelPeriodic (sim) 0.172.7910.570.010.020.010.032.7314.18
Pharmacolibrary.Examples.PKOneCompartmentSimplestModel (sim) 0.032.519.240.010.010.000.022.4712.49
Pharmacolibrary.Examples.PKPD_Midazolam (sim) 0.123.178.330.010.020.010.033.1012.46
Pharmacolibrary.Examples.PKPD_integration.PKPD_HemodynamicsMeurs_flatNorm (sim) 21.907.385.991.220.280.060.425.4136.46
Pharmacolibrary.Examples.PKPG_1C_Gentamicin (sim) 0.353.1310.350.010.020.010.033.0614.69
Pharmacolibrary.Examples.PKPG_1C_GentamicineEquation (sim) 0.022.148.430.010.010.000.022.1011.28
Pharmacolibrary.Examples.PKThreeCompartmentModel (sim) 0.042.767.780.010.020.010.032.6911.22
Pharmacolibrary.Examples.PKTwoCompartmentModel (sim) 0.052.8010.430.020.020.010.042.7213.95
Pharmacolibrary.Examples.PK_1C_Digoxin (sim) 0.122.258.420.010.020.010.022.1911.43
Pharmacolibrary.Examples.PK_1C_Gentamicin (sim) 0.183.016.060.010.020.010.022.959.85
Pharmacolibrary.Examples.PK_1C_GentamicinEquations (sim) 0.032.378.470.010.010.000.022.3311.54
Pharmacolibrary.Examples.PK_1C_GentamicinEquations2 (sim) 0.022.095.810.010.010.000.012.068.46
Pharmacolibrary.Examples.PK_1C_GentamicineSimple (sim) 0.032.408.810.010.010.000.022.3611.90
Pharmacolibrary.Examples.PK_1C_Lithium2 (sim) 0.172.385.960.010.020.010.022.339.13
Pharmacolibrary.Examples.PK_1C_LithiumCarbonate (sim) 1.062.8110.480.020.030.010.042.7215.08
Pharmacolibrary.Examples.PK_2C_IVMidazolam (sim) 0.092.778.020.020.020.010.032.6911.69
Pharmacolibrary.Examples.PK_3C_FentanylIV (sim) 0.052.807.690.010.020.010.032.7311.18
Pharmacolibrary.Examples.PK_Caffeine.PK_population_Caffeine (sim) 0.032.665.990.020.040.010.042.549.31
Pharmacolibrary.Examples.PK_Lithium.PGx_experiment (sim) 0.033.245.720.030.090.030.073.019.53
Pharmacolibrary.Examples.PK_Lithium.PK_1C_Lithium (sim) 0.172.345.910.010.020.010.022.299.03
Pharmacolibrary.Examples.PK_Lithium.PK_1C_Lithium_CI (sim) 0.262.715.700.020.040.010.042.609.24
Pharmacolibrary.Examples.Paracetamol_Experiment (sim) 0.052.685.780.020.040.010.042.589.12
Pharmacolibrary.Examples.Pharmacogenomics.PKPG_2C_generic (sim) 1.394.385.730.060.600.060.113.5412.13
Pharmacolibrary.Examples.Pharmacogenomics.PKPG_Gentamicin_Experiment (sim) 0.052.807.400.020.060.020.052.6510.83
Pharmacolibrary.Examples.Pharmacogenomics.PKPG_Lithium_Experiment (sim) 0.783.058.610.030.080.020.062.8613.07
Pharmacolibrary.Examples.Pharmacogenomics.PK_2C_generic (sim) 0.123.615.990.040.130.040.093.3210.35
Pharmacolibrary.Examples.Pharmacogenomics.PK_2C_single (sim) 0.032.315.970.010.020.010.032.248.92
Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_1C_Gentamicin (sim) 0.262.348.440.010.020.010.022.2911.72
Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_1C_Lithium (sim) 2.642.466.550.010.020.010.022.4012.42
Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_2C_Ibuprofen (sim) 0.302.537.270.010.020.010.032.4710.89
Pharmacolibrary.Examples.Pharmacogenomics.Patient_PK_2C_Ibuprofen (sim) 0.172.416.000.010.020.010.032.349.18
Pharmacolibrary.Pharmacogenomics.PGx.GenotypePhenotypeComponent 0.000.025.760.020.000.000.000.006.50
Pharmacolibrary.Pharmacokinetic.Models.PBPK_whole_body (sim) 0.043.845.670.070.180.030.093.4710.15
Pharmacolibrary.Pharmacokinetic.Models.PK_1C (sim) 0.122.235.720.010.010.000.022.198.66
Pharmacolibrary.Pharmacokinetic.Models.PK_2C (sim) 0.132.335.710.010.010.010.022.288.78
Pharmacolibrary.Pharmacokinetic.Models.PK_2C_enteral (sim) 0.162.375.660.020.030.010.032.288.84
Pharmacolibrary.Pharmacokinetic.Models.PK_3C_enteral (sim) 0.172.405.700.010.020.010.022.348.84