Pharmacolibrary test using OpenModelica

Total Frontend Backend SimCode Templates Compilation Simulation Verification
90 71 71 71 71 71 69 0

Test started: 2026-09-30 13:10:05
Total time taken: 0:08:37
System info: ryzen-9950x: AMD Ryzen 9 9950X3D 16-Core Processor, 124 GB RAM, Ubuntu 26.04.1 LTS

OpenModelica Version: v1.28.0-dev.1108+g3e44702452.cmake
OpenModelicaLibraryTesting Changes

CommitDateAuthorSummary
56c8fde2026-09-30 09:49:19 +0200Martin SjölundFix the solvers stage calling solvers()

Tested Library: Pharmacolibrary 25.09

{
 "path": "Pharmacolibrary",
 "sha": "de5fc7280ddaefacbac29ec6e89daea657dd2bbc",
 "support": "fullSupport",
 "uses": {
  "Modelica": "4.0.0"
 },
 "version": "25.9.0",
 "zipfile": "https://github.com/creative-connections/Pharmacolibrary/archive/de5fc7280ddaefacbac29ec6e89daea657dd2bbc.zip"
}

BuildModel time limit: 660s
Simulation time limit: 240s
Default tolerance: 1e-06
Default number of intervals: 2500
Optimization level: Tool default

Flags:
setCommandLineOptions("-d=nogen");
setCommandLineOptions("-d=initialization");
setCommandLineOptions("-d=backenddaeinfo");
setCommandLineOptions("-d=discreteinfo");
setCommandLineOptions("-d=stateselection");
setCommandLineOptions("-d=execstat");
setMatchingAlgorithm("PFPlusExt");
setIndexReductionMethod("dynamicStateSelection");
Config:
{
 "library": "Pharmacolibrary"
}

Links are provided if getErrorString() or the simulation generates output. The links are coded with red if there were errors, yellow if there were warnings, and normal links if there are only notifications.

ModelVerifiedSimulateTotal buildModelParsingFrontendBackendSimCodeTemplatesCompileTotal Execution
Pharmacolibrary.DevModels.PKOneCompartmentModelPeriodic (sim) 0.161.103.270.010.010.000.021.065.40
Pharmacolibrary.DevModels.PKTwoCompartmentModel (sim) 0.011.053.380.010.010.000.021.015.19
Pharmacolibrary.DevModels.PKTwoCompartmentModelComparison (sim) 0.031.213.220.010.010.010.021.165.15
Pharmacolibrary.DevModels.PKTwoCompartmentModelOral (sim) 0.021.023.350.010.010.000.010.995.07
Pharmacolibrary.DevModels.PKWholeBodyModel 0.000.013.410.010.000.000.000.004.07
Pharmacolibrary.DevModels.Palivizumab.PKTwoCompartmentPalivizumab (sim) 0.021.043.320.010.010.010.020.995.03
Pharmacolibrary.DevModels.Palivizumab.ViralInfectionDynamics1 (sim) 0.010.873.440.000.000.000.010.855.02
Pharmacolibrary.DevModels.Palivizumab.ViralInfectionDynamics2 (sim) 0.011.313.320.100.010.000.191.015.34
Pharmacolibrary.DevModels.Paracetamol.AcetaminophenEquations (sim) 0.000.963.270.000.000.000.010.944.79
Pharmacolibrary.DevModels.Paracetamol.ParacetamolComponents 0.000.023.180.020.000.000.000.003.89
Pharmacolibrary.DevModels.Paracetamol.ParacetamolEquations2 (sim) 0.011.003.180.010.010.000.010.974.84
Pharmacolibrary.DevModels.Remdesivir.ComponentRemdesivirPK 0.000.023.190.020.000.000.000.003.87
Pharmacolibrary.DevModels.Remdesivir.ComponentRemdesivirPKPD 0.000.023.190.020.000.000.000.003.77
Pharmacolibrary.DevModels.Remdesivir.Eq10RemdesivirPK (sim) 0.071.083.170.010.010.010.031.025.03
Pharmacolibrary.DevModels.SingleCompartment.GentamicinePK 0.000.013.300.010.000.000.000.003.89
Pharmacolibrary.DevModels.SingleCompartment.LithiumPK 0.000.023.400.020.000.000.000.004.02
Pharmacolibrary.DevModels.SingleCompartment.PBPKModel 0.000.023.350.020.000.000.000.004.01
Pharmacolibrary.DevModels.SingleCompartment.ParacetamolPK 0.000.023.280.020.000.000.000.003.86
Pharmacolibrary.DevModels.SingleCompartment.RemdesivirPK 0.000.033.370.030.000.000.000.004.04
Pharmacolibrary.DevModels.SingleCompartment.TheopyllinePK 0.000.023.430.020.000.000.000.004.09
Pharmacolibrary.DevModels.SingleDoseArteryTissuePeripheral 0.000.013.360.010.000.000.000.003.94
Pharmacolibrary.DevModels.SingleDoseArteryTissuePeripheralElimination 0.000.023.330.020.000.000.000.003.95
Pharmacolibrary.DevModels.SingleDoseArteryTissueVenous 0.000.013.390.010.000.000.000.004.00
Pharmacolibrary.DevModels.SingleDoseDiffusion (sim) 0.831.093.420.010.010.010.021.047.91
Pharmacolibrary.DevModels.SingleDoseIAFloxuridine 0.000.023.240.020.000.000.000.003.84
Pharmacolibrary.DevModels.SingleDoseIVAmiodarone 0.000.013.410.010.000.000.000.003.98
Pharmacolibrary.DevModels.SingleDoseIVAmiodaroneEquations 0.000.023.340.020.000.000.000.004.06
Pharmacolibrary.DevModels.SingleDoseIntravenousWholeBody (sim) 2.521.513.430.020.040.010.031.4115.71
Pharmacolibrary.DevModels.SingleDoseLumen (sim) 0.801.073.310.010.010.000.021.037.74
Pharmacolibrary.DevModels.SingleDoseVeinsGutSpleenPortalVeinLiver (sim) 1.001.323.200.010.010.000.021.278.36
Pharmacolibrary.DevModels.Systems.PKOneCompartmentEquations (sim) 0.050.863.410.000.000.000.010.845.04
Pharmacolibrary.Drugs.B_BloodAndBloodFormingOrgans.B01A_AntithromboticAgents.B01AB05_Enoxaparin.Enoxaparin (sim) 0.130.973.150.010.010.010.020.935.20
Pharmacolibrary.Drugs.C_CardiovascularSystem.C01A_CardiacGlycosides.C01AA05_Digoxin.Digoxin_1 (sim) 0.140.953.190.010.020.010.040.885.23
Pharmacolibrary.Drugs.C_CardiovascularSystem.C01A_CardiacGlycosides.C01AA05_Digoxin.Digoxin_IV (sim) 0.190.953.090.010.010.000.020.915.07
Pharmacolibrary.Drugs.J_AntiinfectivesForSystemicUse.J05A_DirectActingAntivirals.J05AB16_Remdesivir.Remdesivir_2C_metabolites (sim) 2.011.313.170.010.020.010.021.2510.99
Pharmacolibrary.Drugs.J_AntiinfectivesForSystemicUse.J06B_Immunoglobulins.J06BD01_Palivizumab.Palivizumab_IM (sim) 0.311.083.040.010.010.000.021.045.59
Pharmacolibrary.Drugs.J_AntiinfectivesForSystemicUse.J06B_Immunoglobulins.J06BD08_Nirsevimab.Nirsevimab_IM (sim) 0.761.133.080.010.010.000.021.097.03
Pharmacolibrary.Drugs.L_AntineoplasticAndImmunomodulatingAgents.L01B_Antimetabolites.L01BC02_Fluorouracil.Fluorouracil_1C (sim) 0.140.913.100.010.010.000.010.885.03
Pharmacolibrary.Drugs.M_MusculoSkeletalSystem.M01A_AntiinflammatoryAndAntirheumaticProductsNonStero.M01AE01_Ibuprofen.Ibuprofen (sim) 0.191.033.100.010.010.000.020.995.32
Pharmacolibrary.Drugs.N_NervousSystem.N02A_Opioids.N02AB03_Fentanyl.Fentanyl_3C (sim) 0.150.993.080.010.010.000.010.965.10
Pharmacolibrary.Drugs.N_NervousSystem.N02B_OtherAnalgesicsAndAntipyretics.N02BE01_Paracetamol.Comparison_healthy_SMA 0.000.453.030.450.000.000.000.004.11
Pharmacolibrary.Drugs.N_NervousSystem.N02B_OtherAnalgesicsAndAntipyretics.N02BE01_Paracetamol.Paracetamol_SMA (sim) 0.141.083.110.010.010.000.021.055.24
Pharmacolibrary.Drugs.N_NervousSystem.N02B_OtherAnalgesicsAndAntipyretics.N02BE01_Paracetamol.Paracetamol_healthy 0.000.463.100.460.000.000.000.004.07
Pharmacolibrary.Drugs.N_NervousSystem.N02B_OtherAnalgesicsAndAntipyretics.N02BE01_Paracetamol.Paracetamol_healthy_oral (sim) 0.171.023.120.010.010.000.020.995.28
Pharmacolibrary.Drugs.N_NervousSystem.N02B_OtherAnalgesicsAndAntipyretics.N02BE01_Paracetamol.Paracetamol_metabolites (sim) 0.061.182.990.010.010.000.021.144.98
Pharmacolibrary.Drugs.N_NervousSystem.N05A_Antipsychotics.N05AN01_Lithium.Lithium (sim) 0.181.023.060.010.010.010.030.955.19
Pharmacolibrary.Drugs.N_NervousSystem.N05C_HypnoticsAndSedatives.N05CD08_Midazolam.Midazolam_2C (sim) 0.150.993.160.010.010.000.010.965.18
Pharmacolibrary.Drugs.N_NervousSystem.N06B_PsychostimulantsAgentsUsedForAdhdAndNootropics.N06BC01_Caffeine.Caffeine (sim) 0.271.033.130.010.010.010.020.995.66
Pharmacolibrary.Drugs.Z_Unclassified.J06B_ProbableImmunoglobulins.DZIF10c.DZIF10c_1C (sim) 0.031.093.120.010.010.010.021.054.89
Pharmacolibrary.Drugs.Z_Unclassified.J06B_ProbableImmunoglobulins.MHAA459A.MHAA459A_2C (sim) 0.221.033.250.010.010.010.030.975.52
Pharmacolibrary.Examples.PBPK_OralDoseGUTWholeBody (sim) 0.031.592.950.020.040.010.041.495.21
Pharmacolibrary.Examples.PBPK_SingleDoseVenousArteryTissue (sim) 0.021.073.020.010.010.000.011.044.72
Pharmacolibrary.Examples.PKOneCompartmentModel (sim) 0.171.003.110.010.010.000.010.985.15
Pharmacolibrary.Examples.PKOneCompartmentModelPeriodic (sim) 0.140.892.980.010.010.000.010.864.90
Pharmacolibrary.Examples.PKOneCompartmentSimplestModel (sim) 0.010.982.920.000.000.000.010.964.46
Pharmacolibrary.Examples.PKPD_Midazolam (sim) 0.091.113.010.010.010.010.021.075.04
Pharmacolibrary.Examples.PKPD_integration.PKPD_HemodynamicsMeurs_flatNorm (sim) 15.963.892.890.400.300.030.093.0744.23
Pharmacolibrary.Examples.PKPG_1C_Gentamicin (sim) 0.341.003.050.010.010.000.010.975.66
Pharmacolibrary.Examples.PKPG_1C_GentamicineEquation (sim) 0.010.882.970.010.000.000.010.864.50
Pharmacolibrary.Examples.PKThreeCompartmentModel (sim) 0.011.012.910.010.010.000.020.974.51
Pharmacolibrary.Examples.PKTwoCompartmentModel (sim) 0.010.943.030.010.010.000.010.914.57
Pharmacolibrary.Examples.PK_1C_Digoxin (sim) 0.140.882.990.000.010.000.010.854.91
Pharmacolibrary.Examples.PK_1C_Gentamicin (sim) 0.200.973.030.010.010.000.010.945.14
Pharmacolibrary.Examples.PK_1C_GentamicinEquations (sim) 0.000.853.050.000.000.000.010.834.46
Pharmacolibrary.Examples.PK_1C_GentamicinEquations2 (sim) 0.000.923.020.000.000.000.010.904.55
Pharmacolibrary.Examples.PK_1C_GentamicineSimple (sim) 0.011.012.880.010.010.000.010.994.47
Pharmacolibrary.Examples.PK_1C_Lithium2 (sim) 0.190.923.050.010.010.000.010.895.11
Pharmacolibrary.Examples.PK_1C_LithiumCarbonate (sim) 1.360.853.070.010.010.000.010.828.50
Pharmacolibrary.Examples.PK_2C_IVMidazolam (sim) 0.081.082.920.010.010.010.021.044.82
Pharmacolibrary.Examples.PK_3C_FentanylIV (sim) 0.020.922.930.010.010.010.020.884.47
Pharmacolibrary.Examples.PK_Caffeine.PK_population_Caffeine (sim) 0.011.282.950.010.020.010.031.214.84
Pharmacolibrary.Examples.PK_Lithium.PGx_experiment (sim) 0.011.803.000.020.040.020.061.665.42
Pharmacolibrary.Examples.PK_Lithium.PK_1C_Lithium (sim) 0.170.912.960.010.010.010.020.874.99
Pharmacolibrary.Examples.PK_Lithium.PK_1C_Lithium_CI (sim) 0.261.222.930.010.020.010.021.165.46
Pharmacolibrary.Examples.Paracetamol_Experiment (sim) 0.031.292.930.030.030.010.021.204.88
Pharmacolibrary.Examples.Pharmacogenomics.PKPG_2C_generic (sim) 0.912.083.010.020.060.020.061.928.51
Pharmacolibrary.Examples.Pharmacogenomics.PKPG_Gentamicin_Experiment (sim) 0.021.443.030.020.020.010.031.365.11
Pharmacolibrary.Examples.Pharmacogenomics.PKPG_Lithium_Experiment (sim) 0.661.512.920.020.030.010.031.426.95
Pharmacolibrary.Examples.Pharmacogenomics.PK_2C_generic (sim) 0.041.932.930.030.050.020.051.795.61
Pharmacolibrary.Examples.Pharmacogenomics.PK_2C_single (sim) 0.011.122.890.010.010.000.021.084.61
Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_1C_Gentamicin (sim) 0.231.053.010.010.010.000.011.015.32
Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_1C_Lithium (sim) 2.501.123.070.010.010.000.021.0912.24
Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_2C_Ibuprofen (sim) 0.271.143.030.010.010.000.021.105.56
Pharmacolibrary.Examples.Pharmacogenomics.Patient_PK_2C_Ibuprofen (sim) 0.200.973.090.010.010.000.020.935.16
Pharmacolibrary.Pharmacogenomics.PGx.GenotypePhenotypeComponent 0.000.023.150.020.000.000.000.003.72
Pharmacolibrary.Pharmacokinetic.Models.PBPK_whole_body (sim) 0.011.853.180.020.070.020.061.695.67
Pharmacolibrary.Pharmacokinetic.Models.PK_1C (sim) 0.190.983.050.010.010.010.020.935.08
Pharmacolibrary.Pharmacokinetic.Models.PK_2C (sim) 0.160.943.140.010.010.000.010.915.11
Pharmacolibrary.Pharmacokinetic.Models.PK_2C_enteral (sim) 0.011.003.080.010.010.010.020.955.03
Pharmacolibrary.Pharmacokinetic.Models.PK_3C_enteral (sim) 0.011.063.200.010.010.010.021.015.25