Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr Pharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_2C_Ibuprofen.conf.json
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo): time 0.001365/0.001365, allocations: 81.92 kB / 19.87 MB, free: 4.621 MB / 18.57 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo): time 0.001517/0.001517, allocations: 173.7 kB / 23.28 MB, free: 1.223 MB / 18.57 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo): time 0.9688/0.9688, allocations: 177.1 MB / 203.7 MB, free: 5.5 MB / 186.7 MB
"
[Timeout remaining time 179]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/package.mo", uses=false) [Timeout 180]
"[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/Examples/package.order:0:0-0:0:readonly] Warning: The package.order file does not list all .mo files and directories (containing package.mo) present in its directory.
Missing names are:
	Paracetamol_Experiment
Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/package.mo): time 1.548/1.548, allocations: 273.5 MB / 0.5212 GB, free: 14.66 MB / 458.7 MB
"
[Timeout remaining time 178]
Using package Pharmacolibrary with version 25.09 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/package.mo)
Using package Modelica with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo)
Using package Complex with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo)
Using package ModelicaServices with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo)
Running command: translateModel(Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_2C_Ibuprofen,tolerance=1e-06,outputFormat="empty",numberOfIntervals=86400,variableFilter="",fileNamePrefix="Pharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_2C_Ibuprofen")
translateModel(Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_2C_Ibuprofen,tolerance=1e-06,outputFormat="empty",numberOfIntervals=86400,variableFilter="",fileNamePrefix="Pharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_2C_Ibuprofen") [Timeout 660]
"Notification: Performance of FrontEnd - loaded program: time 2.083e-06/2.083e-06, allocations: 1.422 kB / 0.6479 GB, free: 38.09 MB / 0.5262 GB
Notification: Performance of FrontEnd - Absyn->SCode: time 1.643e-05/1.851e-05, allocations: 3.812 kB / 0.6479 GB, free: 38.09 MB / 0.5262 GB
Notification: Performance of NFInst.instantiate(Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_2C_Ibuprofen): time 0.00372/0.003739, allocations: 4.27 MB / 0.6521 GB, free: 35.29 MB / 0.5262 GB
Notification: Performance of NFInst.instExpressions: time 0.00133/0.005069, allocations: 1.172 MB / 0.6532 GB, free: 34.52 MB / 0.5262 GB
Notification: Performance of NFInst.updateImplicitVariability: time 0.0001383/0.005207, allocations: 4.156 kB / 0.6532 GB, free: 34.52 MB / 0.5262 GB
Notification: Performance of NFTyping.typeComponents: time 0.0003623/0.005569, allocations: 152.6 kB / 0.6534 GB, free: 34.46 MB / 0.5262 GB
Notification: Performance of NFTyping.typeBindings: time 0.0002292/0.005798, allocations: 182.5 kB / 0.6535 GB, free: 34.36 MB / 0.5262 GB
Notification: Performance of NFTyping.typeClassSections: time 0.0004069/0.006205, allocations: 204.4 kB / 0.6537 GB, free: 34.26 MB / 0.5262 GB
Notification: Performance of NFFlatten.flatten: time 0.0003808/0.006586, allocations: 0.5763 MB / 0.6543 GB, free: 33.95 MB / 0.5262 GB
Notification: Performance of NFFlatten.resolveConnections: time 0.0001504/0.006736, allocations: 99.86 kB / 0.6544 GB, free: 33.89 MB / 0.5262 GB
Notification: Performance of NFEvalConstants.evaluate: time 0.0002773/0.007014, allocations: 300.9 kB / 0.6547 GB, free: 33.77 MB / 0.5262 GB
Notification: Performance of NFSimplifyModel.simplify: time 0.0002772/0.007291, allocations: 193 kB / 0.6549 GB, free: 33.71 MB / 0.5262 GB
Notification: Performance of NFPackage.collectConstants: time 5.162e-05/0.007343, allocations: 38.16 kB / 0.6549 GB, free: 33.71 MB / 0.5262 GB
Notification: Performance of NFFlatten.collectFunctions: time 0.0001963/0.007539, allocations: 184.4 kB / 0.6551 GB, free: 33.66 MB / 0.5262 GB
Notification: Performance of NFScalarize.scalarize: time 6.948e-05/0.007608, allocations: 107.9 kB / 0.6552 GB, free: 33.59 MB / 0.5262 GB
Notification: Performance of NFVerifyModel.verify: time 0.0001434/0.007752, allocations: 176.8 kB / 0.6554 GB, free: 33.52 MB / 0.5262 GB
Notification: Performance of NFConvertDAE.convert: time 0.0005163/0.008268, allocations: 0.4982 MB / 0.6558 GB, free: 33.29 MB / 0.5262 GB
Notification: Performance of FrontEnd - DAE generated: time 2.305e-06/0.00827, allocations: 0 / 0.6558 GB, free: 33.29 MB / 0.5262 GB
Notification: Performance of FrontEnd: time 8.52e-07/0.008271, allocations: 0.5625 kB / 0.6558 GB, free: 33.29 MB / 0.5262 GB
Notification: Performance of Transformations before backend: time 6.462e-06/0.008278, allocations: 1.375 kB / 0.6558 GB, free: 33.29 MB / 0.5262 GB
Notification: Model statistics after passing the front-end and creating the data structures used by the back-end:
 * Number of equations: 81
 * Number of variables: 81
Notification: Performance of Generate backend data structure: time 0.000852/0.00913, allocations: 0.9936 MB / 0.6568 GB, free: 32.45 MB / 0.5262 GB
Notification: Performance of prepare preOptimizeDAE: time 3.26e-05/0.009162, allocations: 8.562 kB / 0.6568 GB, free: 32.45 MB / 0.5262 GB
Notification: Performance of preOpt normalInlineFunction (simulation): time 0.0002277/0.00939, allocations: 147.8 kB / 0.657 GB, free: 32.39 MB / 0.5262 GB
Notification: Performance of preOpt evaluateParameters (simulation): time 0.0002168/0.009607, allocations: 281.6 kB / 0.6572 GB, free: 32.16 MB / 0.5262 GB
Notification: Performance of preOpt simplifyIfEquations (simulation): time 1.9e-05/0.009626, allocations: 23 kB / 0.6573 GB, free: 32.15 MB / 0.5262 GB
Notification: Performance of preOpt expandDerOperator (simulation): time 4.235e-05/0.009668, allocations: 53.7 kB / 0.6573 GB, free: 32.13 MB / 0.5262 GB
Notification: Performance of preOpt clockPartitioning (simulation): time 0.0003063/0.009974, allocations: 423.2 kB / 0.6577 GB, free: 31.85 MB / 0.5262 GB
Notification: Performance of preOpt findStateOrder (simulation): time 1.598e-05/0.00999, allocations: 1.5 kB / 0.6577 GB, free: 31.85 MB / 0.5262 GB
Notification: Performance of preOpt replaceEdgeChange (simulation): time 2.082e-05/0.01001, allocations: 17.16 kB / 0.6577 GB, free: 31.84 MB / 0.5262 GB
Notification: Performance of preOpt inlineArrayEqn (simulation): time 8.095e-06/0.01002, allocations: 8.25 kB / 0.6577 GB, free: 31.84 MB / 0.5262 GB
Notification: Performance of preOpt removeEqualRHS (simulation): time 0.0001945/0.01021, allocations: 294.6 kB / 0.658 GB, free: 31.66 MB / 0.5262 GB
Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.000843/0.01106, allocations: 0.9552 MB / 0.6589 GB, free: 31 MB / 0.5262 GB
Notification: Performance of preOpt comSubExp (simulation): time 0.0002676/0.01132, allocations: 323.4 kB / 0.6593 GB, free: 30.77 MB / 0.5262 GB
Notification: Performance of preOpt resolveLoops (simulation): time 0.0001072/0.01143, allocations: 223.1 kB / 0.6595 GB, free: 30.58 MB / 0.5262 GB
Notification: Performance of preOpt evalFunc (simulation): time 1.95e-05/0.01145, allocations: 11.61 kB / 0.6595 GB, free: 30.58 MB / 0.5262 GB
Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 0.0002401/0.01169, allocations: 0.5056 MB / 0.66 GB, free: 30.15 MB / 0.5262 GB
Notification: Performance of pre-optimization done (n=52): time 1.824e-06/0.01169, allocations: 0.7188 kB / 0.66 GB, free: 30.15 MB / 0.5262 GB
Notification: Performance of matching and sorting (n=55): time 0.001206/0.0129, allocations: 1.655 MB / 0.6616 GB, free: 28.95 MB / 0.5262 GB
Notification: Performance of inlineWhenForInitialization (initialization): time 6.059e-05/0.01296, allocations: 354.7 kB / 0.6619 GB, free: 28.54 MB / 0.5262 GB
Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.0002076/0.01317, allocations: 428.3 kB / 0.6623 GB, free: 28.28 MB / 0.5262 GB
Notification: Performance of collectPreVariables (initialization): time 2.592e-05/0.01319, allocations: 41.77 kB / 0.6624 GB, free: 28.24 MB / 0.5262 GB
Notification: Performance of collectInitialEqns (initialization): time 9.383e-05/0.01329, allocations: 280.3 kB / 0.6626 GB, free: 28.01 MB / 0.5262 GB
Notification: Performance of collectInitialBindings (initialization): time 7.433e-05/0.01336, allocations: 178.9 kB / 0.6628 GB, free: 27.87 MB / 0.5262 GB
Notification: Performance of simplifyInitialFunctions (initialization): time 9.717e-05/0.01346, allocations: 113.9 kB / 0.6629 GB, free: 27.8 MB / 0.5262 GB
Notification: Performance of setup shared object (initialization): time 7.616e-05/0.01353, allocations: 0.549 MB / 0.6635 GB, free: 27.28 MB / 0.5262 GB
Notification: Performance of preBalanceInitialSystem (initialization): time 0.0001842/0.01372, allocations: 267.2 kB / 0.6637 GB, free: 27.06 MB / 0.5262 GB
Notification: Performance of partitionIndependentBlocks (initialization): time 0.000196/0.01391, allocations: 445.6 kB / 0.6641 GB, free: 26.61 MB / 0.5262 GB
Notification: Performance of analyzeInitialSystem (initialization): time 0.0003938/0.01431, allocations: 0.89 MB / 0.665 GB, free: 25.78 MB / 0.5262 GB
Notification: Performance of solveInitialSystemEqSystem (initialization): time 3.206e-06/0.01431, allocations: 1.406 kB / 0.665 GB, free: 25.78 MB / 0.5262 GB
Notification: Performance of matching and sorting (n=79) (initialization): time 0.0005387/0.01485, allocations: 0.8117 MB / 0.6658 GB, free: 25.23 MB / 0.5262 GB
Notification: Performance of prepare postOptimizeDAE: time 4.607e-05/0.0149, allocations: 184.1 kB / 0.666 GB, free: 25.03 MB / 0.5262 GB
Notification: Performance of postOpt simplifyComplexFunction (initialization): time 6.813e-06/0.0149, allocations: 2.844 kB / 0.666 GB, free: 25.03 MB / 0.5262 GB
Notification: Performance of postOpt tearingSystem (initialization): time 1.402e-05/0.01492, allocations: 10.62 kB / 0.666 GB, free: 25.03 MB / 0.5262 GB
Notification: Performance of postOpt solveSimpleEquations (initialization): time 0.0002901/0.01521, allocations: 120.7 kB / 0.6661 GB, free: 25.02 MB / 0.5262 GB
Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 7.014e-06/0.01521, allocations: 7.031 kB / 0.6661 GB, free: 25.02 MB / 0.5262 GB
Notification: Performance of postOpt simplifyAllExpressions (initialization): time 0.0001494/0.01536, allocations: 24.08 kB / 0.6661 GB, free: 25.01 MB / 0.5262 GB
Notification: Performance of postOpt collapseArrayExpressions (initialization): time 6.617e-05/0.01543, allocations: 62.81 kB / 0.6662 GB, free: 25 MB / 0.5262 GB
Warning: Assuming fixed start value for the following 14 variables:
         central.AUC:VARIABLE(unit = \"kg.s/m3\" fixed = true )  \"area under curve\" type: Real
         periodicDose.TotalCumulativeMass:VARIABLE(min = -1e-12 unit = \"kg\" fixed = true )  \"Total dose adminitrated by this source\" type: Real
         periodicDose.absorptionLumen.AUC:VARIABLE(unit = \"kg.s/m3\" fixed = true )  \"area under curve\" type: Real
         periodicDose.variableDose.TotalCumulativeMass:VARIABLE(min = -1e-12 unit = \"kg\" fixed = true )  \"Total dose adminitrated by this source\" type: Real
         peripheral.AUC:VARIABLE(unit = \"kg.s/m3\" fixed = true )  \"area under curve\" type: Real
         peripheral.Cmin:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true )  type: Real
         peripheral.Cmax:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true )  type: Real
         periodicDose.absorptionLumen.Cmin:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true )  type: Real
         periodicDose.absorptionLumen.Cmax:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true )  type: Real
         central.Cmin:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true )  type: Real
         central.Cmax:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true )  type: Real
         peripheral.rising:DISCRETE(fixed = true protected = true )  type: Boolean
         periodicDose.absorptionLumen.rising:DISCRETE(fixed = true protected = true )  type: Boolean
         central.rising:DISCRETE(fixed = true protected = true )  type: Boolean
Notification: Model statistics after passing the back-end for initialization:
 * Number of independent subsystems: 16
 * Number of states: 0 ()
 * Number of discrete variables: 31 ($PRE.peripheral.Cmin,peripheral.Cmin,$PRE.peripheral.Cmax,peripheral.Cmax,$PRE.periodicDose.absorptionLumen.Cmin,periodicDose.absorptionLumen.Cmin,$PRE.periodicDose.absorptionLumen.Cmax,periodicDose.absorptionLumen.Cmax,$PRE.central.Cmin,central.Cmin,$PRE.central.Cmax,central.Cmax,$PRE.peripheral.rising,$PRE.periodicDose.pulse.count,$PRE.periodicDose.pulse.T_start,$PRE.periodicDose.absorptionLumen.rising,$PRE.central.rising,CYP2C19.status,SLC22A2.status,peripheral.rising,periodicDose.pulse.count,periodicDose.pulse.T_start,periodicDose.absorptionLumen.rising,central.rising,$whenCondition6,$whenCondition5,$whenCondition4,$whenCondition3,$whenCondition2,$whenCondition1,$whenCondition7)
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for initialization (73):
 * Single equations (assignments): 67
 * Array equations: 0
 * Algorithm blocks: 6
 * Record equations: 0
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 0
 * Mixed (continuous/discrete) equation systems: 0
Notification: Performance of prepare postOptimizeDAE: time 0.0002187/0.01565, allocations: 410.8 kB / 0.6666 GB, free: 24.63 MB / 0.5262 GB
Notification: Performance of postOpt lateInlineFunction (simulation): time 0.0001313/0.01578, allocations: 123.9 kB / 0.6667 GB, free: 24.59 MB / 0.5262 GB
Notification: Performance of postOpt wrapFunctionCalls (simulation): time 5.553e-05/0.01584, allocations: 56.66 kB / 0.6668 GB, free: 24.55 MB / 0.5262 GB
Notification: Performance of postOpt inlineArrayEqn (simulation): time 4.608e-06/0.01584, allocations: 7.531 kB / 0.6668 GB, free: 24.55 MB / 0.5262 GB
Notification: Performance of postOpt constantLinearSystem (simulation): time 4.639e-06/0.01584, allocations: 0 / 0.6668 GB, free: 24.55 MB / 0.5262 GB
Notification: Performance of postOpt simplifysemiLinear (simulation): time 6.402e-06/0.01585, allocations: 4.984 kB / 0.6668 GB, free: 24.55 MB / 0.5262 GB
Notification: Performance of postOpt removeSimpleEquations (simulation): time 0.0007974/0.01665, allocations: 1.132 MB / 0.6679 GB, free: 23.78 MB / 0.5262 GB
Notification: Performance of postOpt simplifyComplexFunction (simulation): time 2.124e-06/0.01665, allocations: 5.375 kB / 0.6679 GB, free: 23.77 MB / 0.5262 GB
Notification: Performance of postOpt solveSimpleEquations (simulation): time 0.0002097/0.01686, allocations: 81.84 kB / 0.668 GB, free: 23.77 MB / 0.5262 GB
Notification: Performance of postOpt tearingSystem (simulation): time 2.926e-06/0.01686, allocations: 1.438 kB / 0.668 GB, free: 23.77 MB / 0.5262 GB
Notification: Performance of postOpt inputDerivativesUsed (simulation): time 2.476e-05/0.01689, allocations: 19.69 kB / 0.668 GB, free: 23.76 MB / 0.5262 GB
Notification: Performance of postOpt calculateStrongComponentJacobians (simulation): time 3.257e-06/0.01689, allocations: 2.844 kB / 0.668 GB, free: 23.76 MB / 0.5262 GB
Notification: Performance of postOpt calculateStateSetsJacobians (simulation): time 1.172e-06/0.01689, allocations: 0.5312 kB / 0.668 GB, free: 23.76 MB / 0.5262 GB
Notification: Performance of postOpt symbolicJacobian (simulation): time 0.0006945/0.01759, allocations: 1.176 MB / 0.6691 GB, free: 22.93 MB / 0.5262 GB
Notification: Performance of postOpt removeConstants (simulation): time 0.0001046/0.01769, allocations: 87.95 kB / 0.6692 GB, free: 22.89 MB / 0.5262 GB
Notification: Performance of postOpt simplifyTimeIndepFuncCalls (simulation): time 5.159e-05/0.01774, allocations: 17.84 kB / 0.6692 GB, free: 22.88 MB / 0.5262 GB
Notification: Performance of postOpt simplifyAllExpressions (simulation): time 0.0001216/0.01786, allocations: 18.75 kB / 0.6693 GB, free: 22.88 MB / 0.5262 GB
Notification: Performance of postOpt findZeroCrossings (simulation): time 7.463e-05/0.01794, allocations: 50.19 kB / 0.6693 GB, free: 22.86 MB / 0.5262 GB
Notification: Performance of postOpt collapseArrayExpressions (simulation): time 6.09e-05/0.018, allocations: 53.52 kB / 0.6693 GB, free: 22.86 MB / 0.5262 GB
Notification: Performance of sorting global known variables: time 0.0001181/0.01812, allocations: 266.4 kB / 0.6696 GB, free: 22.7 MB / 0.5262 GB
Notification: Performance of sort global known variables: time 8.1e-08/0.01812, allocations: 0.6562 kB / 0.6696 GB, free: 22.7 MB / 0.5262 GB
Notification: Performance of remove unused functions: time 0.0003299/0.01845, allocations: 140.1 kB / 0.6697 GB, free: 22.69 MB / 0.5262 GB
Notification: Model statistics after passing the back-end for simulation:
 * Number of independent subsystems: 1
 * Number of states: 9 (central.C,central.AUC,elim.MExc,periodicDose.TotalCumulativeMass,periodicDose.absorptionLumen.C,periodicDose.absorptionLumen.AUC,periodicDose.variableDose.TotalCumulativeMass,peripheral.C,peripheral.AUC)
 * Number of discrete variables: 20 ($whenCondition7,$whenCondition1,$whenCondition2,$whenCondition3,$whenCondition4,$whenCondition5,$whenCondition6,central.Cmax,central.Cmin,central.rising,periodicDose.absorptionLumen.Cmax,periodicDose.absorptionLumen.Cmin,periodicDose.absorptionLumen.rising,periodicDose.pulse.T_start,periodicDose.pulse.count,peripheral.Cmax,peripheral.Cmin,peripheral.rising,SLC22A2.status,CYP2C19.status)
 * Number of discrete states: 18 (periodicDose.pulse.count,CYP2C19.status,SLC22A2.status,peripheral.Cmin,$whenCondition6,peripheral.Cmax,$whenCondition5,peripheral.rising,periodicDose.absorptionLumen.Cmin,$whenCondition4,periodicDose.absorptionLumen.Cmax,$whenCondition3,periodicDose.absorptionLumen.rising,central.Cmin,$whenCondition2,central.Cmax,$whenCondition1,central.rising)
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for simulation (44):
 * Single equations (assignments): 37
 * Array equations: 0
 * Algorithm blocks: 5
 * Record equations: 0
 * When equations: 2
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 0
 * Mixed (continuous/discrete) equation systems: 0
Notification: Performance of Backend phase and start with SimCode phase: time 0.0001946/0.01864, allocations: 181.2 kB / 0.6699 GB, free: 22.57 MB / 0.5262 GB
Notification: Performance of simCode: created initialization part: time 0.0004134/0.01906, allocations: 0.9098 MB / 0.6708 GB, free: 21.79 MB / 0.5262 GB
Notification: Performance of simCode: created event and clocks part: time 1.954e-06/0.01906, allocations: 1.406 kB / 0.6708 GB, free: 21.79 MB / 0.5262 GB
Notification: Performance of simCode: created simulation system equations: time 0.0002091/0.01927, allocations: 0.5648 MB / 0.6714 GB, free: 21.28 MB / 0.5262 GB
Notification: Performance of simCode: created of all other equations (e.g. parameter, nominal, assert, etc): time 0.0004217/0.01969, allocations: 143.9 kB / 0.6715 GB, free: 21.24 MB / 0.5262 GB
Notification: Performance of simCode: created linear, non-linear and system jacobian parts: time 0.001765/0.02145, allocations: 1.362 MB / 0.6728 GB, free: 20.34 MB / 0.5262 GB
Notification: Performance of simCode: some other stuff during SimCode phase: time 6.828e-05/0.02152, allocations: 129 kB / 0.6729 GB, free: 20.27 MB / 0.5262 GB
Notification: Performance of simCode: alias equations: time 0.0001288/0.02165, allocations: 52.14 kB / 0.673 GB, free: 20.26 MB / 0.5262 GB
Notification: Performance of simCode: all other stuff during SimCode phase: time 0.0002596/0.02191, allocations: 227 kB / 0.6732 GB, free: 20.18 MB / 0.5262 GB
Notification: Performance of SimCode: time 9.92e-07/0.02191, allocations: 0 / 0.6732 GB, free: 20.18 MB / 0.5262 GB
Notification: Performance of Templates: time 0.01042/0.03233, allocations: 8.779 MB / 0.6818 GB, free: 18.23 MB / 0.5262 GB
"
[Timeout remaining time 660]
make -j1 -f Pharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_2C_Ibuprofen.makefile [Timeout 660]
(rm -f Pharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_2C_Ibuprofen.pipe ; mkfifo Pharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_2C_Ibuprofen.pipe ; head -c 1048576 < Pharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_2C_Ibuprofen.pipe >> ../files/Pharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_2C_Ibuprofen.sim & (cd run_cvode && ../Pharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_2C_Ibuprofen -abortSlowSimulation -alarm=240  -lv LOG_STATS -inputPath=.. -s cvode) > Pharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_2C_Ibuprofen.pipe 2>&1) [Timeout 240]
(rm -f Pharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_2C_Ibuprofen_gbode.pipe ; mkfifo Pharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_2C_Ibuprofen_gbode.pipe ; head -c 1048576 < Pharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_2C_Ibuprofen_gbode.pipe >> /var/lib/jenkins/ws/OpenModelicaLibraryTestingWork/OpenModelicaLibraryTesting/files/Pharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_2C_Ibuprofen_gbode.sim & (cd run_gbode && ../Pharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_2C_Ibuprofen -abortSlowSimulation -alarm=240  -lv LOG_STATS -inputPath=.. -s gbode -gbm=radauIIA3) > Pharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_2C_Ibuprofen_gbode.pipe 2>&1) [Timeout 240]
(rm -f Pharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_2C_Ibuprofen_ida.pipe ; mkfifo Pharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_2C_Ibuprofen_ida.pipe ; head -c 1048576 < Pharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_2C_Ibuprofen_ida.pipe >> /var/lib/jenkins/ws/OpenModelicaLibraryTestingWork/OpenModelicaLibraryTesting/files/Pharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_2C_Ibuprofen_ida.sim & (cd run_ida && ../Pharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_2C_Ibuprofen -abortSlowSimulation -alarm=240  -lv LOG_STATS -inputPath=.. -s ida) > Pharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_2C_Ibuprofen_ida.pipe 2>&1) [Timeout 240]
[Calling sys.exit(0), Time elapsed: 5.3708237879909575]