Pharmacolibrary test using OpenModelica

Total	Frontend	Backend	SimCode	Templates	Compilation	Simulation	Verification
90	71	71	71	71	71	71	0

Test started: 2026-10-06 20:34:19
Total time taken: 0:03:31
System info: ryzen-9950x: AMD Ryzen 9 9950X3D 16-Core Processor, 124 GB RAM, Ubuntu 26.04.1 LTS

OpenModelica Version: v1.28.0-dev.1298+g017c65039a.rust
OpenModelicaLibraryTesting Changes

Commit	Date	Author	Summary
626032b	2026-10-06 15:05:47 +0200	Martin Sjölund	Stop createTables from hanging on table locks (#369)

Tested Library: Pharmacolibrary 25.09

{
 "path": "Pharmacolibrary",
 "sha": "de5fc7280ddaefacbac29ec6e89daea657dd2bbc",
 "support": "fullSupport",
 "uses": {
  "Modelica": "4.0.0"
 },
 "version": "25.9.0",
 "zipfile": "https://github.com/creative-connections/Pharmacolibrary/archive/de5fc7280ddaefacbac29ec6e89daea657dd2bbc.zip"
}

BuildModel time limit: 660s
Simulation time limit: 240s
Default tolerance: 1e-06
Default number of intervals: 2500
Optimization level: Tool default

Flags:

setCommandLineOptions("--simCodeTarget=wasm-jit")
setCommandLineOptions("-d=nogen");
setCommandLineOptions("-d=initialization");
setCommandLineOptions("-d=backenddaeinfo");
setCommandLineOptions("-d=discreteinfo");
setCommandLineOptions("-d=stateselection");
setCommandLineOptions("-d=execstat");
setMatchingAlgorithm("PFPlusExt");
setIndexReductionMethod("dynamicStateSelection");

Config:

{
 "library": "Pharmacolibrary"
}

Links are provided if getErrorString() or the simulation generates output. The links are coded with red if there were errors, yellow if there were warnings, and normal links if there are only notifications.

Model	Simulate	Total buildModel	Parsing	Frontend	Backend	SimCode	Templates	Compile	Total Execution
Pharmacolibrary.DevModels.PKOneCompartmentModelPeriodic (sim)	0.13	0.05	0.92	0.01	0.01	0.01	0.01	0.02	1.78
Pharmacolibrary.DevModels.PKTwoCompartmentModel (sim)	0.01	0.07	0.93	0.01	0.01	0.01	0.01	0.03	1.55
Pharmacolibrary.DevModels.PKTwoCompartmentModelComparison (sim)	0.04	0.08	0.94	0.01	0.02	0.01	0.01	0.04	1.66
Pharmacolibrary.DevModels.PKTwoCompartmentModelOral (sim)	0.01	0.06	0.93	0.01	0.01	0.01	0.01	0.02	1.55
Pharmacolibrary.DevModels.PKWholeBodyModel	0.00	0.03	0.94	0.03	0.00	0.00	0.00	0.00	1.56
Pharmacolibrary.DevModels.Palivizumab.PKTwoCompartmentPalivizumab (sim)	0.01	0.07	0.89	0.01	0.01	0.01	0.01	0.02	1.56
Pharmacolibrary.DevModels.Palivizumab.ViralInfectionDynamics1 (sim)	0.00	0.04	0.94	0.01	0.01	0.01	0.01	0.01	1.62
Pharmacolibrary.DevModels.Palivizumab.ViralInfectionDynamics2 (sim)	0.01	0.10	0.94	0.03	0.01	0.01	0.01	0.03	1.65
Pharmacolibrary.DevModels.Paracetamol.AcetaminophenEquations (sim)	0.00	0.05	0.91	0.01	0.01	0.01	0.01	0.03	1.60
Pharmacolibrary.DevModels.Paracetamol.ParacetamolComponents	0.00	0.03	0.96	0.03	0.00	0.00	0.00	0.00	1.61
Pharmacolibrary.DevModels.Paracetamol.ParacetamolEquations2 (sim)	0.01	0.03	0.91	0.01	0.01	0.00	0.00	0.01	1.56
Pharmacolibrary.DevModels.Remdesivir.ComponentRemdesivirPK	0.00	0.04	0.90	0.04	0.00	0.00	0.00	0.00	1.48
Pharmacolibrary.DevModels.Remdesivir.ComponentRemdesivirPKPD	0.00	0.06	0.93	0.06	0.00	0.00	0.00	0.00	1.63
Pharmacolibrary.DevModels.Remdesivir.Eq10RemdesivirPK (sim)	0.08	0.05	0.93	0.01	0.01	0.01	0.01	0.02	1.64
Pharmacolibrary.DevModels.SingleCompartment.GentamicinePK	0.00	0.03	0.91	0.03	0.00	0.00	0.00	0.00	1.53
Pharmacolibrary.DevModels.SingleCompartment.LithiumPK	0.00	0.04	1.01	0.04	0.00	0.00	0.00	0.00	1.65
Pharmacolibrary.DevModels.SingleCompartment.PBPKModel	0.00	0.05	0.94	0.05	0.00	0.00	0.00	0.00	1.51
Pharmacolibrary.DevModels.SingleCompartment.ParacetamolPK	0.00	0.03	0.88	0.03	0.00	0.00	0.00	0.00	1.49
Pharmacolibrary.DevModels.SingleCompartment.RemdesivirPK	0.00	0.04	0.90	0.04	0.00	0.00	0.00	0.00	1.52
Pharmacolibrary.DevModels.SingleCompartment.TheopyllinePK	0.00	0.03	0.94	0.03	0.00	0.00	0.00	0.00	1.54
Pharmacolibrary.DevModels.SingleDoseArteryTissuePeripheral	0.00	0.03	0.87	0.03	0.00	0.00	0.00	0.00	1.51
Pharmacolibrary.DevModels.SingleDoseArteryTissuePeripheralElimination	0.00	0.04	0.86	0.04	0.00	0.00	0.00	0.00	1.54
Pharmacolibrary.DevModels.SingleDoseArteryTissueVenous	0.00	0.07	0.94	0.07	0.00	0.00	0.00	0.00	1.60
Pharmacolibrary.DevModels.SingleDoseDiffusion (sim)	0.97	0.07	0.88	0.01	0.01	0.01	0.01	0.03	2.55
Pharmacolibrary.DevModels.SingleDoseIAFloxuridine	0.00	0.03	0.93	0.03	0.00	0.00	0.00	0.00	1.58
Pharmacolibrary.DevModels.SingleDoseIVAmiodarone	0.00	0.04	0.96	0.04	0.00	0.00	0.00	0.00	1.63
Pharmacolibrary.DevModels.SingleDoseIVAmiodaroneEquations	0.00	0.03	0.97	0.03	0.00	0.00	0.00	0.00	1.63
Pharmacolibrary.DevModels.SingleDoseIntravenousWholeBody (sim)	3.55	0.18	0.91	0.03	0.05	0.02	0.01	0.06	5.28
Pharmacolibrary.DevModels.SingleDoseLumen (sim)	0.97	0.08	0.89	0.01	0.02	0.01	0.01	0.04	2.63
Pharmacolibrary.DevModels.SingleDoseVeinsGutSpleenPortalVeinLiver (sim)	1.21	0.08	0.91	0.01	0.02	0.01	0.01	0.03	2.85
Pharmacolibrary.DevModels.Systems.PKOneCompartmentEquations (sim)	0.06	0.04	0.90	0.01	0.01	0.01	0.01	0.01	1.56
Pharmacolibrary.Drugs.B_BloodAndBloodFormingOrgans.B01A_AntithromboticAgents.B01AB05_Enoxaparin.Enoxaparin (sim)	0.11	0.08	0.93	0.01	0.02	0.01	0.01	0.03	1.77
Pharmacolibrary.Drugs.C_CardiovascularSystem.C01A_CardiacGlycosides.C01AA05_Digoxin.Digoxin_1 (sim)	0.16	0.08	1.00	0.01	0.01	0.01	0.01	0.03	1.90
Pharmacolibrary.Drugs.C_CardiovascularSystem.C01A_CardiacGlycosides.C01AA05_Digoxin.Digoxin_IV (sim)	0.13	0.07	0.92	0.01	0.01	0.01	0.01	0.03	1.73
Pharmacolibrary.Drugs.J_AntiinfectivesForSystemicUse.J05A_DirectActingAntivirals.J05AB16_Remdesivir.Remdesivir_2C_metabolites (sim)	1.79	0.12	0.95	0.02	0.03	0.01	0.01	0.06	3.47
Pharmacolibrary.Drugs.J_AntiinfectivesForSystemicUse.J06B_Immunoglobulins.J06BD01_Palivizumab.Palivizumab_IM (sim)	0.23	0.07	1.03	0.01	0.02	0.01	0.01	0.03	1.98
Pharmacolibrary.Drugs.J_AntiinfectivesForSystemicUse.J06B_Immunoglobulins.J06BD08_Nirsevimab.Nirsevimab_IM (sim)	0.60	0.07	0.95	0.01	0.01	0.01	0.01	0.03	2.22
Pharmacolibrary.Drugs.L_AntineoplasticAndImmunomodulatingAgents.L01B_Antimetabolites.L01BC02_Fluorouracil.Fluorouracil_1C (sim)	0.11	0.05	0.93	0.01	0.01	0.01	0.01	0.02	1.64
Pharmacolibrary.Drugs.M_MusculoSkeletalSystem.M01A_AntiinflammatoryAndAntirheumaticProductsNonStero.M01AE01_Ibuprofen.Ibuprofen (sim)	0.13	0.06	0.95	0.01	0.01	0.01	0.01	0.03	1.70
Pharmacolibrary.Drugs.N_NervousSystem.N02A_Opioids.N02AB03_Fentanyl.Fentanyl_3C (sim)	0.14	0.07	0.88	0.01	0.02	0.01	0.01	0.03	1.66
Pharmacolibrary.Drugs.N_NervousSystem.N02B_OtherAnalgesicsAndAntipyretics.N02BE01_Paracetamol.Comparison_healthy_SMA	0.00	0.32	0.93	0.32	0.00	0.00	0.00	0.00	1.87
Pharmacolibrary.Drugs.N_NervousSystem.N02B_OtherAnalgesicsAndAntipyretics.N02BE01_Paracetamol.Paracetamol_SMA (sim)	0.12	0.06	0.92	0.01	0.01	0.01	0.01	0.03	1.76
Pharmacolibrary.Drugs.N_NervousSystem.N02B_OtherAnalgesicsAndAntipyretics.N02BE01_Paracetamol.Paracetamol_healthy	0.00	0.32	0.91	0.32	0.00	0.00	0.00	0.00	1.86
Pharmacolibrary.Drugs.N_NervousSystem.N02B_OtherAnalgesicsAndAntipyretics.N02BE01_Paracetamol.Paracetamol_healthy_oral (sim)	0.13	0.06	0.84	0.01	0.01	0.01	0.01	0.03	1.70
Pharmacolibrary.Drugs.N_NervousSystem.N02B_OtherAnalgesicsAndAntipyretics.N02BE01_Paracetamol.Paracetamol_metabolites (sim)	0.05	0.11	0.84	0.03	0.04	0.01	0.01	0.04	1.58
Pharmacolibrary.Drugs.N_NervousSystem.N05A_Antipsychotics.N05AN01_Lithium.Lithium (sim)	0.14	0.11	0.90	0.01	0.01	0.01	0.01	0.07	1.72
Pharmacolibrary.Drugs.N_NervousSystem.N05C_HypnoticsAndSedatives.N05CD08_Midazolam.Midazolam_2C (sim)	0.11	0.08	0.90	0.01	0.02	0.01	0.01	0.03	1.70
Pharmacolibrary.Drugs.N_NervousSystem.N06B_PsychostimulantsAgentsUsedForAdhdAndNootropics.N06BC01_Caffeine.Caffeine (sim)	0.23	0.08	0.88	0.01	0.02	0.01	0.01	0.04	1.74
Pharmacolibrary.Drugs.Z_Unclassified.J06B_ProbableImmunoglobulins.DZIF10c.DZIF10c_1C (sim)	0.02	0.10	0.89	0.03	0.01	0.01	0.01	0.04	1.66
Pharmacolibrary.Drugs.Z_Unclassified.J06B_ProbableImmunoglobulins.MHAA459A.MHAA459A_2C (sim)	0.24	0.07	0.95	0.01	0.01	0.01	0.01	0.03	1.87
Pharmacolibrary.Examples.PBPK_OralDoseGUTWholeBody (sim)	0.03	0.17	0.92	0.03	0.05	0.01	0.01	0.06	1.84
Pharmacolibrary.Examples.PBPK_SingleDoseVenousArteryTissue (sim)	0.01	0.06	0.89	0.01	0.01	0.01	0.01	0.02	1.62
Pharmacolibrary.Examples.PKOneCompartmentModel (sim)	0.14	0.06	5.13	0.01	0.01	0.01	0.01	0.03	6.02
Pharmacolibrary.Examples.PKOneCompartmentModelPeriodic (sim)	0.11	0.06	5.12	0.01	0.01	0.01	0.01	0.02	5.97
Pharmacolibrary.Examples.PKOneCompartmentSimplestModel (sim)	0.00	0.05	5.37	0.01	0.01	0.01	0.00	0.02	6.09
Pharmacolibrary.Examples.PKPD_Midazolam (sim)	0.07	0.09	1.39	0.01	0.02	0.01	0.01	0.05	2.21
Pharmacolibrary.Examples.PKPD_integration.PKPD_HemodynamicsMeurs_flatNorm (sim)	0.07	0.95	0.96	0.40	0.15	0.03	0.03	0.34	2.72
Pharmacolibrary.Examples.PKPG_1C_Gentamicin (sim)	0.37	0.07	0.83	0.01	0.01	0.01	0.01	0.03	1.96
Pharmacolibrary.Examples.PKPG_1C_GentamicineEquation (sim)	0.00	0.06	0.83	0.01	0.01	0.01	0.01	0.03	1.61
Pharmacolibrary.Examples.PKThreeCompartmentModel (sim)	0.01	0.06	4.44	0.01	0.01	0.01	0.01	0.03	5.07
Pharmacolibrary.Examples.PKTwoCompartmentModel (sim)	0.01	0.06	4.89	0.01	0.01	0.01	0.01	0.03	5.54
Pharmacolibrary.Examples.PK_1C_Digoxin (sim)	0.10	0.06	0.88	0.02	0.01	0.01	0.01	0.02	1.70
Pharmacolibrary.Examples.PK_1C_Gentamicin (sim)	0.18	0.05	5.10	0.01	0.01	0.01	0.01	0.03	6.01
Pharmacolibrary.Examples.PK_1C_GentamicinEquations (sim)	0.00	0.04	5.30	0.01	0.01	0.01	0.01	0.02	6.00
Pharmacolibrary.Examples.PK_1C_GentamicinEquations2 (sim)	0.01	0.05	0.84	0.01	0.01	0.01	0.01	0.02	1.52
Pharmacolibrary.Examples.PK_1C_GentamicineSimple (sim)	0.00	0.04	5.34	0.01	0.01	0.01	0.00	0.02	6.02
Pharmacolibrary.Examples.PK_1C_Lithium2 (sim)	0.15	0.06	0.83	0.01	0.01	0.01	0.01	0.03	1.75
Pharmacolibrary.Examples.PK_1C_LithiumCarbonate (sim)	1.20	0.05	4.89	0.01	0.01	0.01	0.00	0.02	6.76
Pharmacolibrary.Examples.PK_2C_IVMidazolam (sim)	0.07	0.08	4.66	0.01	0.01	0.01	0.01	0.04	5.42
Pharmacolibrary.Examples.PK_3C_FentanylIV (sim)	0.01	0.06	4.24	0.01	0.01	0.01	0.01	0.03	4.84
Pharmacolibrary.Examples.PK_Caffeine.PK_population_Caffeine (sim)	0.00	0.14	0.83	0.03	0.03	0.01	0.01	0.06	1.60
Pharmacolibrary.Examples.PK_Lithium.PGx_experiment (sim)	0.00	0.20	0.85	0.04	0.05	0.02	0.01	0.09	1.76
Pharmacolibrary.Examples.PK_Lithium.PK_1C_Lithium (sim)	0.15	0.06	0.84	0.01	0.01	0.01	0.01	0.03	1.71
Pharmacolibrary.Examples.PK_Lithium.PK_1C_Lithium_CI (sim)	0.22	0.12	0.91	0.02	0.03	0.01	0.01	0.06	1.88
Pharmacolibrary.Examples.Paracetamol_Experiment (sim)	0.03	0.11	0.98	0.02	0.02	0.01	0.01	0.05	1.75
Pharmacolibrary.Examples.Pharmacogenomics.PKPG_2C_generic (sim)	1.10	0.30	0.83	0.04	0.07	0.02	0.01	0.15	2.91
Pharmacolibrary.Examples.Pharmacogenomics.PKPG_Gentamicin_Experiment (sim)	0.02	0.12	0.83	0.02	0.03	0.01	0.01	0.05	1.78
Pharmacolibrary.Examples.Pharmacogenomics.PKPG_Lithium_Experiment (sim)	0.79	0.16	0.83	0.03	0.04	0.02	0.01	0.07	2.45
Pharmacolibrary.Examples.Pharmacogenomics.PK_2C_generic (sim)	0.07	0.25	1.03	0.04	0.06	0.02	0.01	0.11	1.96
Pharmacolibrary.Examples.Pharmacogenomics.PK_2C_single (sim)	0.01	0.07	0.84	0.01	0.01	0.01	0.01	0.03	1.56
Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_1C_Gentamicin (sim)	0.21	0.06	0.85	0.01	0.01	0.01	0.01	0.03	1.84
Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_1C_Lithium (sim)	2.66	0.07	0.90	0.01	0.01	0.01	0.01	0.03	4.33
Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_2C_Ibuprofen (sim)	0.27	0.08	0.84	0.01	0.02	0.01	0.01	0.03	1.83
Pharmacolibrary.Examples.Pharmacogenomics.Patient_PK_2C_Ibuprofen (sim)	0.15	0.07	0.95	0.01	0.01	0.01	0.01	0.03	1.75
Pharmacolibrary.Pharmacogenomics.PGx.GenotypePhenotypeComponent	0.00	0.03	0.94	0.03	0.00	0.00	0.00	0.00	1.61
Pharmacolibrary.Pharmacokinetic.Models.PBPK_whole_body (sim)	0.00	0.28	0.92	0.05	0.08	0.02	0.01	0.11	1.82
Pharmacolibrary.Pharmacokinetic.Models.PK_1C (sim)	0.11	0.06	0.94	0.01	0.01	0.01	0.01	0.03	1.70
Pharmacolibrary.Pharmacokinetic.Models.PK_2C (sim)	0.12	0.07	0.97	0.01	0.02	0.01	0.01	0.03	1.79
Pharmacolibrary.Pharmacokinetic.Models.PK_2C_enteral (sim)	0.14	0.07	0.96	0.01	0.02	0.01	0.01	0.03	1.79
Pharmacolibrary.Pharmacokinetic.Models.PK_3C_enteral (sim)	0.15	0.08	0.91	0.01	0.02	0.01	0.01	0.04	1.80