Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr Chemical_master_Chemical.Examples.debug.EnzymeKinetics2_.conf.json
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo): time 0.001844/0.001844, allocations: 79.86 kB / 19.18 MB, free: 2.527 MB / 14.72 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo): time 0.002686/0.002686, allocations: 165.6 kB / 22.46 MB, free: 5.359 MB / 14.72 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo): time 1.528/1.528, allocations: 177.1 MB / 202.8 MB, free: 9.172 MB / 190.1 MB
"
[Timeout remaining time 178]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/package.mo): time 0.1415/0.1415, allocations: 17.46 MB / 276.6 MB, free: 15.21 MB / 270.1 MB
"
[Timeout remaining time 180]
Using package Chemical with version 2.0.1 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/package.mo)
Using package Modelica with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo)
Using package Complex with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo)
Using package ModelicaServices with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo)
Running command: translateModel(Chemical.Examples.debug.EnzymeKinetics2_,tolerance=1e-06,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Chemical_master_Chemical.Examples.debug.EnzymeKinetics2_")
translateModel(Chemical.Examples.debug.EnzymeKinetics2_,tolerance=1e-06,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Chemical_master_Chemical.Examples.debug.EnzymeKinetics2_") [Timeout 660]
"Notification: Performance of FrontEnd - loaded program: time 1.192e-06/1.192e-06, allocations: 0 / 412.1 MB, free: 4.293 MB / 334.1 MB
Notification: Performance of FrontEnd - Absyn->SCode: time 1.974e-05/2.093e-05, allocations: 2.281 kB / 412.1 MB, free: 4.289 MB / 334.1 MB
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Boundaries.mo:1343:7-1343:66:writable] Warning: An inner declaration for outer component system could not be found and was automatically generated.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Boundaries.mo:1343:7-1343:66:writable] Notification: The diagnostics message for the missing inner is: 
Your model is using an outer \"system\" component but
an inner \"system\" component is not defined.
For simulation drag Modelica.Fluid.System into your model
to specify system properties.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Boundaries.mo:1361:7-1361:76:writable] Warning: An inner declaration for outer component dropOfCommons could not be found and was automatically generated.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Boundaries.mo:1361:7-1361:76:writable] Notification: The diagnostics message for the missing inner is: 
Your model is using an outer \"dropOfCommons\" component but
an inner \"dropOfCommons\" component is not defined.
Use Chemical.DropOfCommons in your model
to specify system properties.
Notification: Performance of NFInst.instantiate(Chemical.Examples.debug.EnzymeKinetics2_): time 0.04278/0.0428, allocations: 32 MB / 444.1 MB, free: 4.395 MB / 366.1 MB
Notification: Performance of NFInst.instExpressions: time 0.1948/0.2376, allocations: 10.11 MB / 454.2 MB, free: 31.4 MB / 366.1 MB
Notification: Performance of NFInst.updateImplicitVariability: time 0.00188/0.2395, allocations: 84.66 kB / 454.3 MB, free: 31.4 MB / 366.1 MB
Notification: Performance of NFTyping.typeComponents: time 0.004359/0.2439, allocations: 1.934 MB / 456.2 MB, free: 31.17 MB / 366.1 MB
Notification: Performance of NFTyping.typeBindings: time 0.00371/0.2476, allocations: 1.551 MB / 457.8 MB, free: 30.58 MB / 366.1 MB
Notification: Performance of NFTyping.typeClassSections: time 0.007437/0.255, allocations: 4.085 MB / 461.9 MB, free: 29.13 MB / 366.1 MB
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1332:3-1332:55:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.MM has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1333:3-1333:87:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.Hf has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1334:3-1334:81:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.H0 has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1336:3-1336:82:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.alow has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 7)) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1337:3-1337:79:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.blow has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 3)) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1338:3-1338:84:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.ahigh has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 7)) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1339:3-1339:81:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.bhigh has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 3)) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1341:3-1342:83:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.z has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1344:3-1344:89:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.phase has no value, and is fixed during initialization (fixed=true), using available start value (start=Chemical.Interfaces.Phase.Gas) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1347:3-1347:140:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.VmBase has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1348:3-1348:137:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.VmExcess has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value.
Notification: Performance of NFFlatten.flatten: time 0.005237/0.2603, allocations: 3.632 MB / 465.5 MB, free: 27.34 MB / 366.1 MB
Notification: Performance of NFFlatten.resolveConnections: time 0.0009011/0.2612, allocations: 0.5552 MB / 466 MB, free: 27.07 MB / 366.1 MB
Notification: Performance of NFEvalConstants.evaluate: time 0.002514/0.2637, allocations: 2.051 MB / 468.1 MB, free: 26.18 MB / 366.1 MB
Notification: Performance of NFSimplifyModel.simplify: time 0.002155/0.2658, allocations: 1.631 MB / 469.7 MB, free: 25.64 MB / 366.1 MB
Notification: Performance of NFPackage.collectConstants: time 0.0004149/0.2662, allocations: 314.4 kB / 470 MB, free: 25.64 MB / 366.1 MB
Notification: Performance of NFFlatten.collectFunctions: time 0.004626/0.2709, allocations: 2.057 MB / 472.1 MB, free: 24.93 MB / 366.1 MB
Notification: Performance of NFScalarize.scalarize: time 0.0006739/0.2715, allocations: 1.094 MB / 473.2 MB, free: 24.14 MB / 366.1 MB
Notification: Performance of NFVerifyModel.verify: time 0.001332/0.2729, allocations: 1.153 MB / 474.3 MB, free: 23.53 MB / 366.1 MB
Notification: Performance of NFConvertDAE.convert: time 0.007313/0.2802, allocations: 6.27 MB / 480.6 MB, free: 19.25 MB / 366.1 MB
Notification: Performance of FrontEnd - DAE generated: time 3.987e-06/0.2802, allocations: 0 / 480.6 MB, free: 19.25 MB / 366.1 MB
Notification: Performance of FrontEnd: time 1.543e-06/0.2802, allocations: 0 / 480.6 MB, free: 19.25 MB / 366.1 MB
Notification: Performance of Transformations before backend: time 9.608e-05/0.2803, allocations: 0 / 480.6 MB, free: 19.25 MB / 366.1 MB
Notification: Model statistics after passing the front-end and creating the data structures used by the back-end:
 * Number of equations: 960
 * Number of variables: 960
Notification: Performance of Generate backend data structure: time 0.007427/0.2877, allocations: 4.333 MB / 484.9 MB, free: 15.45 MB / 366.1 MB
Notification: Performance of prepare preOptimizeDAE: time 3.613e-05/0.2878, allocations: 12.03 kB / 484.9 MB, free: 15.44 MB / 366.1 MB
Notification: Performance of preOpt normalInlineFunction (simulation): time 0.002419/0.2902, allocations: 0.9025 MB / 485.9 MB, free: 14.54 MB / 366.1 MB
Notification: Performance of preOpt evaluateParameters (simulation): time 0.002446/0.2926, allocations: 1.98 MB / 487.8 MB, free: 12.52 MB / 366.1 MB
Notification: Performance of preOpt simplifyIfEquations (simulation): time 0.0003021/0.2929, allocations: 0.4994 MB / 488.3 MB, free: 11.96 MB / 366.1 MB
Notification: Performance of preOpt expandDerOperator (simulation): time 0.0003316/0.2933, allocations: 296.3 kB / 488.6 MB, free: 11.67 MB / 366.1 MB
Notification: Performance of preOpt clockPartitioning (simulation): time 0.009673/0.3029, allocations: 11.94 MB / 0.4888 GB, free: 15.69 MB / 382.1 MB
Notification: Performance of preOpt findStateOrder (simulation): time 5.085e-05/0.303, allocations: 192 / 0.4888 GB, free: 15.69 MB / 382.1 MB
Notification: Performance of preOpt replaceEdgeChange (simulation): time 0.0002756/0.3033, allocations: 120.3 kB / 0.4889 GB, free: 15.57 MB / 382.1 MB
Notification: Performance of preOpt inlineArrayEqn (simulation): time 0.0005602/0.3038, allocations: 470.7 kB / 0.4894 GB, free: 15.12 MB / 382.1 MB
Notification: Performance of preOpt removeEqualRHS (simulation): time 0.02546/0.3293, allocations: 21.05 MB / 0.5099 GB, free: 10.06 MB / 398.1 MB
Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.03628/0.3656, allocations: 20.63 MB / 0.5301 GB, free: 5.367 MB / 414.1 MB
Notification: Performance of preOpt comSubExp (simulation): time 0.004765/0.3703, allocations: 2.713 MB / 0.5327 GB, free: 2.648 MB / 414.1 MB
Notification: Performance of preOpt resolveLoops (simulation): time 0.003649/0.374, allocations: 2.262 MB / 0.535 GB, free: 396 kB / 414.1 MB
Notification: Performance of preOpt evalFunc (simulation): time 0.02107/0.395, allocations: 12.77 MB / 0.5474 GB, free: 3.578 MB / 430.1 MB
Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 4.659e-05/0.3951, allocations: 43.88 kB / 0.5475 GB, free: 3.527 MB / 430.1 MB
Notification: Performance of pre-optimization done (n=188): time 3.837e-06/0.3951, allocations: 0 / 0.5475 GB, free: 3.527 MB / 430.1 MB
Error: Internal error It is not possible to select continuous time states because Number of Equations 58 greater than number of States 57 to select from.
Error: Internal error Selection of DummyDerivatives failed due to negative system rank of -1!
           There are 31 unassigned equations and 30 potential states.
Error: Internal error - IndexReduction.selectDummyDerivatives2new failed!
Error: Internal error - IndexReduction.processComps4New failed!
Error: Internal error - IndexReduction.dynamicStateSelectionWork failed!
"
[Timeout remaining time 660]
[Calling sys.exit(0), Time elapsed: 2.961125284433365]
Failed to read output from testmodel.py, exit status != 0:
0.44678061455488205 0.462421528 0.178903269
Calling exit ...
<OMPython.OMCSessionZMQ object at 0x7f3a7be9d1e0>