Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr Chemical_master_Chemical.Examples.SimpleReactionsWithJunction.conf.json loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo): time 0.001348/0.001348, allocations: 80.92 kB / 19.18 MB, free: 2.516 MB / 14.72 MB " [Timeout remaining time 180] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo): time 0.0015/0.0015, allocations: 162.9 kB / 22.46 MB, free: 5.375 MB / 14.72 MB " [Timeout remaining time 180] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo): time 1.517/1.517, allocations: 177.1 MB / 202.8 MB, free: 9.172 MB / 190.1 MB " [Timeout remaining time 178] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/package.mo): time 0.1299/0.1299, allocations: 17.45 MB / 276.6 MB, free: 15.21 MB / 270.1 MB " [Timeout remaining time 180] Using package Chemical with version 2.0.1 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/package.mo) Using package Modelica with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo) Using package Complex with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo) Using package ModelicaServices with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo) Running command: translateModel(Chemical.Examples.SimpleReactionsWithJunction,tolerance=1e-06,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Chemical_master_Chemical.Examples.SimpleReactionsWithJunction") translateModel(Chemical.Examples.SimpleReactionsWithJunction,tolerance=1e-06,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Chemical_master_Chemical.Examples.SimpleReactionsWithJunction") [Timeout 660] "Notification: Performance of FrontEnd - loaded program: time 2.034e-06/2.034e-06, allocations: 0 / 412.1 MB, free: 4.301 MB / 334.1 MB Notification: Performance of FrontEnd - Absyn->SCode: time 3.223e-05/3.426e-05, allocations: 2.281 kB / 412.1 MB, free: 4.297 MB / 334.1 MB [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Processes.mo:1084:7-1084:40:writable] Warning: An inner declaration for outer component dropOfCommons could not be found and was automatically generated. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Processes.mo:1084:7-1084:40:writable] Notification: The diagnostics message for the missing inner is: Your model is using an outer \"dropOfCommons\" component but an inner \"dropOfCommons\" component is not defined. Use Chemical.DropOfCommons in your model to specify system properties. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1731:7-1731:66:writable] Warning: An inner declaration for outer component system could not be found and was automatically generated. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1731:7-1731:66:writable] Notification: The diagnostics message for the missing inner is: Your model is using an outer \"system\" component but an inner \"system\" component is not defined. For simulation drag Modelica.Fluid.System into your model to specify system properties. Notification: Performance of NFInst.instantiate(Chemical.Examples.SimpleReactionsWithJunction): time 0.4367/0.4367, allocations: 41.66 MB / 453.7 MB, free: 13.75 MB / 366.1 MB Notification: Performance of NFInst.instExpressions: time 0.01965/0.4564, allocations: 12.97 MB / 466.7 MB, free: 11.71 MB / 366.1 MB Notification: Performance of NFInst.updateImplicitVariability: time 0.004562/0.4609, allocations: 149.5 kB / 466.9 MB, free: 11.64 MB / 366.1 MB Notification: Performance of NFTyping.typeComponents: time 0.006731/0.4677, allocations: 2.592 MB / 469.5 MB, free: 10.71 MB / 366.1 MB Notification: Performance of NFTyping.typeBindings: time 0.008727/0.4764, allocations: 2.849 MB / 472.3 MB, free: 8.816 MB / 366.1 MB Notification: Performance of NFTyping.typeClassSections: time 0.01036/0.4867, allocations: 4.872 MB / 477.2 MB, free: 5.156 MB / 366.1 MB [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1332:3-1332:55:writable] Warning: Parameter r.nextProducts[1].data.MM has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1333:3-1333:87:writable] Warning: Parameter r.nextProducts[1].data.Hf has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1334:3-1334:81:writable] Warning: Parameter r.nextProducts[1].data.H0 has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1336:3-1336:82:writable] Warning: Parameter r.nextProducts[1].data.alow has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 7)) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1337:3-1337:79:writable] Warning: Parameter r.nextProducts[1].data.blow has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 3)) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1338:3-1338:84:writable] Warning: Parameter r.nextProducts[1].data.ahigh has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 7)) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1339:3-1339:81:writable] Warning: Parameter r.nextProducts[1].data.bhigh has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 3)) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1341:3-1342:83:writable] Warning: Parameter r.nextProducts[1].data.z has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1344:3-1344:89:writable] Warning: Parameter r.nextProducts[1].data.phase has no value, and is fixed during initialization (fixed=true), using available start value (start=Chemical.Interfaces.Phase.Gas) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1347:3-1347:140:writable] Warning: Parameter r.nextProducts[1].data.VmBase has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1348:3-1348:137:writable] Warning: Parameter r.nextProducts[1].data.VmExcess has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1332:3-1332:55:writable] Warning: Parameter r1.nextProducts[1].data.MM has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1333:3-1333:87:writable] Warning: Parameter r1.nextProducts[1].data.Hf has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1334:3-1334:81:writable] Warning: Parameter r1.nextProducts[1].data.H0 has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1336:3-1336:82:writable] Warning: Parameter r1.nextProducts[1].data.alow has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 7)) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1337:3-1337:79:writable] Warning: Parameter r1.nextProducts[1].data.blow has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 3)) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1338:3-1338:84:writable] Warning: Parameter r1.nextProducts[1].data.ahigh has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 7)) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1339:3-1339:81:writable] Warning: Parameter r1.nextProducts[1].data.bhigh has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 3)) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1341:3-1342:83:writable] Warning: Parameter r1.nextProducts[1].data.z has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1344:3-1344:89:writable] Warning: Parameter r1.nextProducts[1].data.phase has no value, and is fixed during initialization (fixed=true), using available start value (start=Chemical.Interfaces.Phase.Gas) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1347:3-1347:140:writable] Warning: Parameter r1.nextProducts[1].data.VmBase has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1348:3-1348:137:writable] Warning: Parameter r1.nextProducts[1].data.VmExcess has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1332:3-1332:55:writable] Warning: Parameter r_ref.nextProducts[1].data.MM has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1333:3-1333:87:writable] Warning: Parameter r_ref.nextProducts[1].data.Hf has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1334:3-1334:81:writable] Warning: Parameter r_ref.nextProducts[1].data.H0 has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1336:3-1336:82:writable] Warning: Parameter r_ref.nextProducts[1].data.alow has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 7)) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1337:3-1337:79:writable] Warning: Parameter r_ref.nextProducts[1].data.blow has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 3)) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1338:3-1338:84:writable] Warning: Parameter r_ref.nextProducts[1].data.ahigh has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 7)) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1339:3-1339:81:writable] Warning: Parameter r_ref.nextProducts[1].data.bhigh has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 3)) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1341:3-1342:83:writable] Warning: Parameter r_ref.nextProducts[1].data.z has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1344:3-1344:89:writable] Warning: Parameter r_ref.nextProducts[1].data.phase has no value, and is fixed during initialization (fixed=true), using available start value (start=Chemical.Interfaces.Phase.Gas) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1347:3-1347:140:writable] Warning: Parameter r_ref.nextProducts[1].data.VmBase has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1348:3-1348:137:writable] Warning: Parameter r_ref.nextProducts[1].data.VmExcess has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. Notification: Performance of NFFlatten.flatten: time 0.01017/0.4969, allocations: 7.514 MB / 484.7 MB, free: 0.6836 MB / 366.1 MB Notification: Performance of NFFlatten.resolveConnections: time 0.002437/0.4994, allocations: 1.684 MB / 486.4 MB, free: 15.66 MB / 382.1 MB Notification: Performance of NFEvalConstants.evaluate: time 0.007151/0.5065, allocations: 4.556 MB / 490.9 MB, free: 12.81 MB / 382.1 MB Notification: Performance of NFSimplifyModel.simplify: time 0.00487/0.5114, allocations: 3.523 MB / 494.5 MB, free: 10.82 MB / 382.1 MB Notification: Performance of NFPackage.collectConstants: time 0.0008835/0.5123, allocations: 0.7427 MB / 495.2 MB, free: 10.82 MB / 382.1 MB Notification: Performance of NFFlatten.collectFunctions: time 0.007194/0.5195, allocations: 2.554 MB / 497.7 MB, free: 10.01 MB / 382.1 MB Notification: Performance of NFScalarize.scalarize: time 0.00225/0.5217, allocations: 2.461 MB / 0.4885 GB, free: 8.234 MB / 382.1 MB Notification: Performance of NFVerifyModel.verify: time 0.00392/0.5256, allocations: 2.578 MB / 0.491 GB, free: 6.832 MB / 382.1 MB Notification: Performance of NFConvertDAE.convert: time 0.01725/0.5429, allocations: 12.19 MB / 0.5029 GB, free: 13.68 MB / 398.1 MB Notification: Performance of FrontEnd - DAE generated: time 5.28e-06/0.5429, allocations: 4 kB / 0.5029 GB, free: 13.67 MB / 398.1 MB Notification: Performance of FrontEnd: time 1.603e-06/0.5429, allocations: 4 kB / 0.5029 GB, free: 13.67 MB / 398.1 MB Notification: Performance of Transformations before backend: time 0.0003071/0.5432, allocations: 0 / 0.5029 GB, free: 13.67 MB / 398.1 MB Notification: Model statistics after passing the front-end and creating the data structures used by the back-end: * Number of equations: 2093 * Number of variables: 2093 Notification: Performance of Generate backend data structure: time 0.01896/0.5622, allocations: 8.83 MB / 0.5115 GB, free: 4.758 MB / 398.1 MB Notification: Performance of prepare preOptimizeDAE: time 4.897e-05/0.5622, allocations: 8.031 kB / 0.5116 GB, free: 4.75 MB / 398.1 MB Notification: Performance of preOpt normalInlineFunction (simulation): time 0.006793/0.569, allocations: 1.998 MB / 0.5135 GB, free: 2.746 MB / 398.1 MB Notification: Performance of preOpt evaluateParameters (simulation): time 0.007263/0.5763, allocations: 3.898 MB / 0.5173 GB, free: 14.77 MB / 414.1 MB Notification: Performance of preOpt simplifyIfEquations (simulation): time 0.00102/0.5773, allocations: 1.11 MB / 0.5184 GB, free: 13.53 MB / 414.1 MB Notification: Performance of preOpt expandDerOperator (simulation): time 0.001222/0.5785, allocations: 0.6487 MB / 0.519 GB, free: 12.88 MB / 414.1 MB Notification: Performance of preOpt clockPartitioning (simulation): time 0.03564/0.6141, allocations: 22.51 MB / 0.541 GB, free: 6.289 MB / 430.1 MB Notification: Performance of preOpt findStateOrder (simulation): time 0.0001054/0.6142, allocations: 4.125 kB / 0.541 GB, free: 6.285 MB / 430.1 MB Notification: Performance of preOpt replaceEdgeChange (simulation): time 0.0006107/0.6149, allocations: 272.1 kB / 0.5413 GB, free: 6.02 MB / 430.1 MB Notification: Performance of preOpt inlineArrayEqn (simulation): time 0.001003/0.6159, allocations: 0.8345 MB / 0.5421 GB, free: 5.18 MB / 430.1 MB Notification: Performance of preOpt removeEqualRHS (simulation): time 0.04759/0.6635, allocations: 37.29 MB / 0.5785 GB, free: 15.85 MB / 478.1 MB Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.08071/0.7442, allocations: 44.57 MB / 0.622 GB, free: 3.094 MB / 0.4982 GB Notification: Performance of preOpt comSubExp (simulation): time 0.2374/0.9815, allocations: 6.949 MB / 0.6288 GB, free: 166.8 MB / 0.4982 GB Notification: Performance of preOpt resolveLoops (simulation): time 0.00995/0.9915, allocations: 5.921 MB / 0.6346 GB, free: 163.9 MB / 0.4982 GB Notification: Performance of preOpt evalFunc (simulation): time 0.04004/1.032, allocations: 29.32 MB / 0.6632 GB, free: 146.8 MB / 0.4982 GB Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 4.779e-05/1.032, allocations: 61.56 kB / 0.6633 GB, free: 146.8 MB / 0.4982 GB Notification: Performance of pre-optimization done (n=440): time 6.933e-06/1.032, allocations: 2.688 kB / 0.6633 GB, free: 146.8 MB / 0.4982 GB Error: Internal error IndexReduction.pantelidesIndexReduction failed! System is structurally singular and cannot be handled because the number of unassigned equations is larger than the number of states. Use -d=bltdump to get more information. Error: Internal error Transformation Module PFPlusExt index Reduction Method Pantelides failed! " [Timeout remaining time 659] [Calling sys.exit(0), Time elapsed: 3.570460759103298] Failed to read output from testmodel.py, exit status != 0: 1.0903963260352612 1.100701793 0.555534204 Calling exit ...