Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr Bodylight_Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.conf.json loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo): time 0.002311/0.002311, allocations: 80.44 kB / 19.17 MB, free: 0.7422 MB / 13.93 MB " [Timeout remaining time 180] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo): time 0.002719/0.002719, allocations: 169.9 kB / 22.45 MB, free: 2.105 MB / 18.57 MB " [Timeout remaining time 180] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo): time 1.649/1.649, allocations: 177.1 MB / 202.8 MB, free: 5.539 MB / 186.7 MB " [Timeout remaining time 178] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/package.mo): time 0.09407/0.09407, allocations: 12.74 MB / 271.9 MB, free: 364 kB / 250.7 MB " [Timeout remaining time 180] Using package Bodylight with version 1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/package.mo) Using package Modelica with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo) Using package Complex with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo) Using package ModelicaServices with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo) Running command: translateModel(Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC,tolerance=1e-14,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Bodylight_Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC") translateModel(Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC,tolerance=1e-14,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Bodylight_Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC") [Timeout 660] "Notification: Performance of FrontEnd - loaded program: time 2.995e-06/2.995e-06, allocations: 0 / 403.1 MB, free: 8.086 MB / 330.7 MB Notification: Performance of FrontEnd - Absyn->SCode: time 4.462e-05/4.762e-05, allocations: 14.22 kB / 403.1 MB, free: 8.07 MB / 330.7 MB Notification: Performance of NFInst.instantiate(Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC): time 0.2046/0.2047, allocations: 9.338 MB / 412.5 MB, free: 15.27 MB / 330.7 MB Notification: Performance of NFInst.instExpressions: time 0.01957/0.2242, allocations: 11.02 MB / 423.5 MB, free: 10.52 MB / 330.7 MB Notification: Performance of NFInst.updateImplicitVariability: time 0.002214/0.2265, allocations: 102.9 kB / 423.6 MB, free: 10.46 MB / 330.7 MB Notification: Performance of NFTyping.typeComponents: time 0.001135/0.2276, allocations: 408.4 kB / 424 MB, free: 10.2 MB / 330.7 MB [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T0.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T0.Utilities.readReal' contains a call to impure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T0.Utilities.UnitConversions.findUnit'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T1.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T1.Utilities.readReal' contains a call to impure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T1.Utilities.UnitConversions.findUnit'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R1.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R1.Utilities.readReal' contains a call to impure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R1.Utilities.UnitConversions.findUnit'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T2.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T2.Utilities.readReal' contains a call to impure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T2.Utilities.UnitConversions.findUnit'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R2.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R2.Utilities.readReal' contains a call to impure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R2.Utilities.UnitConversions.findUnit'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T3.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T3.Utilities.readReal' contains a call to impure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T3.Utilities.UnitConversions.findUnit'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R3.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R3.Utilities.readReal' contains a call to impure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R3.Utilities.UnitConversions.findUnit'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T4.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T4.Utilities.readReal' contains a call to impure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T4.Utilities.UnitConversions.findUnit'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R4.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R4.Utilities.readReal' contains a call to impure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R4.Utilities.UnitConversions.findUnit'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R0.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R0.Utilities.readReal' contains a call to impure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R0.Utilities.UnitConversions.findUnit'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.oxygen_unbound.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.oxygen_unbound.Utilities.readReal' contains a call to impure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.oxygen_unbound.Utilities.UnitConversions.findUnit'. Notification: Performance of NFTyping.typeBindings: time 0.008116/0.2357, allocations: 2.196 MB / 426.2 MB, free: 9.004 MB / 330.7 MB [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T0.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T0.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T1.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T1.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R1.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R1.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T2.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T2.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R2.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R2.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T3.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T3.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R3.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R3.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T4.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T4.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R4.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R4.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R0.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R0.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.oxygen_unbound.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.oxygen_unbound.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'. Notification: Performance of NFTyping.typeClassSections: time 0.006791/0.2425, allocations: 2.028 MB / 428.2 MB, free: 8.02 MB / 330.7 MB Notification: Performance of NFFlatten.flatten: time 0.004666/0.2472, allocations: 2.871 MB / 431.1 MB, free: 6.609 MB / 330.7 MB Notification: Performance of NFFlatten.resolveConnections: time 0.0008604/0.248, allocations: 384 kB / 431.5 MB, free: 6.383 MB / 330.7 MB Notification: Performance of NFEvalConstants.evaluate: time 0.002404/0.2504, allocations: 1.374 MB / 432.8 MB, free: 5.891 MB / 330.7 MB Notification: Performance of NFSimplifyModel.simplify: time 0.001957/0.2524, allocations: 1.177 MB / 434 MB, free: 5.305 MB / 330.7 MB Notification: Performance of NFPackage.collectConstants: time 0.0003701/0.2528, allocations: 146 kB / 434.2 MB, free: 5.305 MB / 330.7 MB Notification: Performance of NFFlatten.collectFunctions: time 0.0006415/0.2534, allocations: 156.1 kB / 434.3 MB, free: 5.305 MB / 330.7 MB Notification: Performance of NFScalarize.scalarize: time 0.0005625/0.254, allocations: 0.5469 MB / 434.9 MB, free: 4.883 MB / 330.7 MB Notification: Performance of NFVerifyModel.verify: time 0.001081/0.255, allocations: 0.7129 MB / 435.6 MB, free: 4.52 MB / 330.7 MB Notification: Performance of NFConvertDAE.convert: time 0.002591/0.2576, allocations: 2.435 MB / 438 MB, free: 2.941 MB / 330.7 MB Notification: Performance of FrontEnd - DAE generated: time 4.819e-06/0.2576, allocations: 0 / 438 MB, free: 2.941 MB / 330.7 MB Notification: Performance of FrontEnd: time 1.583e-06/0.2576, allocations: 1.312 kB / 438 MB, free: 2.941 MB / 330.7 MB Notification: Performance of Transformations before backend: time 2.562e-05/0.2577, allocations: 0 / 438 MB, free: 2.941 MB / 330.7 MB Notification: Model statistics after passing the front-end and creating the data structures used by the back-end: * Number of equations: 287 * Number of variables: 287 Notification: Performance of Generate backend data structure: time 0.006027/0.2637, allocations: 2.562 MB / 440.6 MB, free: 1.164 MB / 330.7 MB Notification: Performance of prepare preOptimizeDAE: time 4.473e-05/0.2637, allocations: 14.48 kB / 440.6 MB, free: 1.16 MB / 330.7 MB Notification: Performance of preOpt normalInlineFunction (simulation): time 0.001612/0.2653, allocations: 326.6 kB / 440.9 MB, free: 1.008 MB / 330.7 MB Notification: Performance of preOpt evaluateParameters (simulation): time 0.002975/0.2683, allocations: 1.335 MB / 442.2 MB, free: 88 kB / 330.7 MB Notification: Performance of preOpt simplifyIfEquations (simulation): time 7.417e-05/0.2684, allocations: 90.2 kB / 442.3 MB, free: 44 kB / 330.7 MB Notification: Performance of preOpt expandDerOperator (simulation): time 0.0002026/0.2686, allocations: 119.7 kB / 442.4 MB, free: 4 kB / 330.7 MB Notification: Performance of preOpt clockPartitioning (simulation): time 0.002829/0.2714, allocations: 1.298 MB / 443.7 MB, free: 15.22 MB / 346.7 MB Notification: Performance of preOpt findStateOrder (simulation): time 3.221e-05/0.2715, allocations: 9.344 kB / 443.7 MB, free: 15.21 MB / 346.7 MB Notification: Performance of preOpt replaceEdgeChange (simulation): time 0.0001159/0.2716, allocations: 44.62 kB / 443.8 MB, free: 15.18 MB / 346.7 MB Notification: Performance of preOpt inlineArrayEqn (simulation): time 2.752e-05/0.2716, allocations: 27.03 kB / 443.8 MB, free: 15.18 MB / 346.7 MB Notification: Performance of preOpt removeEqualRHS (simulation): time 0.002074/0.2737, allocations: 1.058 MB / 444.9 MB, free: 14.18 MB / 346.7 MB Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.009654/0.2833, allocations: 3.701 MB / 448.6 MB, free: 10.42 MB / 346.7 MB Notification: Performance of preOpt comSubExp (simulation): time 0.001554/0.2849, allocations: 0.8876 MB / 449.5 MB, free: 9.512 MB / 346.7 MB Notification: Performance of preOpt resolveLoops (simulation): time 0.0009788/0.2859, allocations: 0.5853 MB / 450 MB, free: 8.922 MB / 346.7 MB Notification: Performance of preOpt evalFunc (simulation): time 8.316e-05/0.2859, allocations: 16.94 kB / 450.1 MB, free: 8.906 MB / 346.7 MB Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 4.603e-05/0.286, allocations: 47.48 kB / 450.1 MB, free: 8.852 MB / 346.7 MB Notification: Performance of pre-optimization done (n=98): time 3.326e-06/0.286, allocations: 4 kB / 450.1 MB, free: 8.848 MB / 346.7 MB Notification: Performance of matching and sorting (n=161): time 0.08091/0.3669, allocations: 15.32 MB / 465.4 MB, free: 9.492 MB / 362.7 MB Notification: Performance of inlineWhenForInitialization (initialization): time 9.172e-05/0.367, allocations: 98.42 kB / 465.5 MB, free: 9.379 MB / 362.7 MB Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.002843/0.3698, allocations: 1.682 MB / 467.2 MB, free: 7.656 MB / 362.7 MB Notification: Performance of collectPreVariables (initialization): time 0.000309/0.3701, allocations: 57.7 kB / 467.3 MB, free: 7.594 MB / 362.7 MB Notification: Performance of collectInitialEqns (initialization): time 0.0008939/0.371, allocations: 0.9109 MB / 468.2 MB, free: 6.672 MB / 362.7 MB Notification: Performance of collectInitialBindings (initialization): time 0.0007132/0.3718, allocations: 0.5499 MB / 468.7 MB, free: 6.117 MB / 362.7 MB Notification: Performance of simplifyInitialFunctions (initialization): time 0.0006691/0.3724, allocations: 343.4 kB / 469.1 MB, free: 5.777 MB / 362.7 MB Notification: Performance of setup shared object (initialization): time 0.0001691/0.3726, allocations: 305.1 kB / 469.4 MB, free: 5.477 MB / 362.7 MB Notification: Performance of preBalanceInitialSystem (initialization): time 0.002014/0.3746, allocations: 1.066 MB / 470.4 MB, free: 4.41 MB / 362.7 MB Notification: Performance of partitionIndependentBlocks (initialization): time 0.002425/0.377, allocations: 1.472 MB / 471.9 MB, free: 2.777 MB / 362.7 MB Notification: Performance of analyzeInitialSystem (initialization): time 0.004868/0.3819, allocations: 2.711 MB / 474.6 MB, free: 15.9 MB / 378.7 MB Notification: Performance of solveInitialSystemEqSystem (initialization): time 1.799e-05/0.3819, allocations: 4 kB / 474.6 MB, free: 15.9 MB / 378.7 MB Notification: Performance of matching and sorting (n=236) (initialization): time 0.02044/0.4024, allocations: 5.397 MB / 480 MB, free: 10.48 MB / 378.7 MB Notification: Performance of prepare postOptimizeDAE: time 4.271e-05/0.4024, allocations: 12 kB / 480 MB, free: 10.47 MB / 378.7 MB Notification: Performance of postOpt simplifyComplexFunction (initialization): time 3.06e-05/0.4024, allocations: 12 kB / 480 MB, free: 10.46 MB / 378.7 MB Notification: Performance of postOpt tearingSystem (initialization): time 0.02005/0.4225, allocations: 3.612 MB / 483.6 MB, free: 6.84 MB / 378.7 MB Notification: Performance of postOpt solveSimpleEquations (initialization): time 0.001123/0.4236, allocations: 235.6 kB / 483.9 MB, free: 6.609 MB / 378.7 MB Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 0.04366/0.4673, allocations: 19.9 MB / 0.492 GB, free: 2.5 MB / 394.7 MB Notification: Performance of postOpt simplifyAllExpressions (initialization): time 0.002349/0.4696, allocations: 99.84 kB / 0.4921 GB, free: 2.402 MB / 394.7 MB Notification: Performance of postOpt collapseArrayExpressions (initialization): time 0.0002175/0.4698, allocations: 75.98 kB / 0.4921 GB, free: 2.328 MB / 394.7 MB Notification: Model statistics after passing the back-end for initialization: * Number of independent subsystems: 52 * Number of states: 0 () * Number of discrete variables: 0 () * Number of discrete states: 0 () * Number of clocked states: 0 () * Top-level inputs: 0 Notification: Strong component statistics for initialization (120): * Single equations (assignments): 118 * Array equations: 0 * Algorithm blocks: 0 * Record equations: 0 * When equations: 0 * If-equations: 0 * Equation systems (not torn): 0 * Torn equation systems: 2 * Mixed (continuous/discrete) equation systems: 0 Notification: Torn system details for strict tearing set: * Linear torn systems (#iteration vars, #inner vars, density): 1 system {(3,56,100.0%)} * Non-linear torn systems (#iteration vars, #inner vars): 1 system {(10,49)} Notification: Performance of prepare postOptimizeDAE: time 0.0009363/0.4708, allocations: 437.3 kB / 0.4926 GB, free: 1.891 MB / 394.7 MB Notification: Performance of postOpt lateInlineFunction (simulation): time 0.0004247/0.4712, allocations: 222.5 kB / 0.4928 GB, free: 1.672 MB / 394.7 MB Notification: Performance of postOpt wrapFunctionCalls (simulation): time 0.0007497/0.4719, allocations: 333.8 kB / 0.4931 GB, free: 1.344 MB / 394.7 MB Notification: Performance of postOpt inlineArrayEqn (simulation): time 1.581e-05/0.472, allocations: 16 kB / 0.4931 GB, free: 1.328 MB / 394.7 MB Notification: Performance of postOpt constantLinearSystem (simulation): time 4.471e-05/0.472, allocations: 12 kB / 0.4931 GB, free: 1.316 MB / 394.7 MB Notification: Performance of postOpt simplifysemiLinear (simulation): time 1.484e-05/0.472, allocations: 7.969 kB / 0.4931 GB, free: 1.309 MB / 394.7 MB Notification: Performance of postOpt removeSimpleEquations (simulation): time 0.003404/0.4754, allocations: 1.637 MB / 0.4947 GB, free: 15.63 MB / 410.7 MB Notification: Performance of postOpt simplifyComplexFunction (simulation): time 7.103e-06/0.4754, allocations: 0 / 0.4947 GB, free: 15.63 MB / 410.7 MB Notification: Performance of postOpt solveSimpleEquations (simulation): time 0.0004889/0.4759, allocations: 104 kB / 0.4948 GB, free: 15.53 MB / 410.7 MB Notification: Performance of postOpt tearingSystem (simulation): time 0.0259/0.5018, allocations: 3.445 MB / 0.4982 GB, free: 12.08 MB / 410.7 MB Notification: Performance of postOpt inputDerivativesUsed (simulation): time 0.0003932/0.5022, allocations: 31.92 kB / 0.4982 GB, free: 12.05 MB / 410.7 MB Notification: Performance of postOpt calculateStrongComponentJacobians (simulation): time 0.06011/0.5623, allocations: 19.93 MB / 0.5177 GB, free: 7.895 MB / 426.7 MB Notification: Performance of postOpt calculateStateSetsJacobians (simulation): time 7.554e-06/0.5623, allocations: 3.984 kB / 0.5177 GB, free: 7.891 MB / 426.7 MB Notification: Performance of postOpt symbolicJacobian (simulation): time 0.02288/0.5852, allocations: 6.826 MB / 0.5243 GB, free: 1.027 MB / 426.7 MB Notification: Performance of postOpt removeConstants (simulation): time 0.001776/0.587, allocations: 464.2 kB / 0.5248 GB, free: 0.5703 MB / 426.7 MB Notification: Performance of postOpt simplifyTimeIndepFuncCalls (simulation): time 0.0003582/0.5873, allocations: 24 kB / 0.5248 GB, free: 0.5469 MB / 426.7 MB Notification: Performance of postOpt simplifyAllExpressions (simulation): time 0.001457/0.5888, allocations: 64.02 kB / 0.5249 GB, free: 496 kB / 426.7 MB Notification: Performance of postOpt findZeroCrossings (simulation): time 0.0007153/0.5895, allocations: 153.9 kB / 0.525 GB, free: 340 kB / 426.7 MB Notification: Performance of postOpt collapseArrayExpressions (simulation): time 0.0001214/0.5896, allocations: 39.98 kB / 0.5251 GB, free: 300 kB / 426.7 MB Notification: Performance of sorting global known variables: time 0.001883/0.5915, allocations: 1.104 MB / 0.5261 GB, free: 15.16 MB / 442.7 MB Notification: Performance of sort global known variables: time 1.2e-07/0.5915, allocations: 0 / 0.5261 GB, free: 15.16 MB / 442.7 MB Notification: Performance of remove unused functions: time 0.003021/0.5945, allocations: 0.918 MB / 0.527 GB, free: 14.25 MB / 442.7 MB Notification: Model statistics after passing the back-end for simulation: * Number of independent subsystems: 2 * Number of states: 1 (hemoglobinConservationLaw.state[1]) * Number of discrete variables: 0 () * Number of discrete states: 0 () * Number of clocked states: 0 () * Top-level inputs: 0 Notification: Strong component statistics for simulation (45): * Single equations (assignments): 43 * Array equations: 0 * Algorithm blocks: 0 * Record equations: 0 * When equations: 0 * If-equations: 0 * Equation systems (not torn): 0 * Torn equation systems: 2 * Mixed (continuous/discrete) equation systems: 0 Notification: Torn system details for strict tearing set: * Linear torn systems (#iteration vars, #inner vars, density): 1 system {(6,53,86.1%)} * Non-linear torn systems (#iteration vars, #inner vars): 1 system {(10,49)} Notification: Performance of Backend phase and start with SimCode phase: time 0.0003027/0.5948, allocations: 123.1 kB / 0.5271 GB, free: 14.12 MB / 442.7 MB Notification: Performance of simCode: created initialization part: time 0.01004/0.6049, allocations: 3.73 MB / 0.5308 GB, free: 10.36 MB / 442.7 MB Notification: Performance of simCode: created event and clocks part: time 4.429e-06/0.6049, allocations: 0 / 0.5308 GB, free: 10.36 MB / 442.7 MB Notification: Performance of simCode: created simulation system equations: time 0.008944/0.6138, allocations: 2.497 MB / 0.5332 GB, free: 7.836 MB / 442.7 MB Notification: Performance of simCode: created of all other equations (e.g. parameter, nominal, assert, etc): time 0.00293/0.6168, allocations: 366.1 kB / 0.5336 GB, free: 7.48 MB / 442.7 MB Notification: Performance of simCode: created linear, non-linear and system jacobian parts: time 0.008575/0.6253, allocations: 3.924 MB / 0.5374 GB, free: 3.535 MB / 442.7 MB Notification: Performance of simCode: some other stuff during SimCode phase: time 0.001382/0.6267, allocations: 1.032 MB / 0.5384 GB, free: 2.465 MB / 442.7 MB Notification: Performance of simCode: alias equations: time 0.0007941/0.6275, allocations: 181.4 kB / 0.5386 GB, free: 2.281 MB / 442.7 MB Notification: Performance of simCode: all other stuff during SimCode phase: time 0.0002596/0.6278, allocations: 88.48 kB / 0.5387 GB, free: 2.195 MB / 442.7 MB Notification: Performance of SimCode: time 1.423e-06/0.6278, allocations: 0 / 0.5387 GB, free: 2.195 MB / 442.7 MB Notification: Performance of Templates: time 0.2907/0.9185, allocations: 67.16 MB / 0.6043 GB, free: 160.9 MB / 490.7 MB " [Timeout remaining time 659] make -j1 -f Bodylight_Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.makefile [Timeout 660] (rm -f Bodylight_Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.pipe ; mkfifo Bodylight_Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.pipe ; head -c 1048576 < Bodylight_Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.pipe >> ../files/Bodylight_Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.sim & ./Bodylight_Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC -abortSlowSimulation -alarm=240 -lv LOG_STATS > Bodylight_Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.pipe 2>&1) [Timeout 240] [Calling os._exit(0), Time elapsed: 9.355331623926759]