Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr Bodylight_Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.conf.json loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo): time 0.001884/0.001884, allocations: 80.44 kB / 19.17 MB, free: 0.7422 MB / 13.93 MB " [Timeout remaining time 180] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo): time 0.002085/0.002085, allocations: 169.9 kB / 22.45 MB, free: 2.102 MB / 18.57 MB " [Timeout remaining time 180] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo): time 1.635/1.635, allocations: 177.1 MB / 202.8 MB, free: 5.746 MB / 186.7 MB " [Timeout remaining time 178] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/package.mo): time 0.09579/0.09579, allocations: 12.75 MB / 271.9 MB, free: 0.4961 MB / 250.7 MB " [Timeout remaining time 180] Using package Bodylight with version 1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/package.mo) Using package Modelica with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo) Using package Complex with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo) Using package ModelicaServices with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo) Running command: translateModel(Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC,tolerance=1e-14,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Bodylight_Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC") translateModel(Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC,tolerance=1e-14,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Bodylight_Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC") [Timeout 660] "Notification: Performance of FrontEnd - loaded program: time 2.404e-06/2.404e-06, allocations: 0 / 403.1 MB, free: 8.078 MB / 330.7 MB Notification: Performance of FrontEnd - Absyn->SCode: time 3.08e-05/3.32e-05, allocations: 9.234 kB / 403.1 MB, free: 8.07 MB / 330.7 MB Notification: Performance of NFInst.instantiate(Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC): time 0.01944/0.01948, allocations: 5.268 MB / 408.4 MB, free: 2.777 MB / 330.7 MB Notification: Performance of NFInst.instExpressions: time 0.2108/0.2302, allocations: 5.587 MB / 414 MB, free: 15.22 MB / 330.7 MB Notification: Performance of NFInst.updateImplicitVariability: time 0.0006382/0.2309, allocations: 44.81 kB / 414 MB, free: 15.22 MB / 330.7 MB Notification: Performance of NFTyping.typeComponents: time 0.0004023/0.2313, allocations: 190.7 kB / 414.2 MB, free: 15.16 MB / 330.7 MB [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.OxyRHm.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.OxyRHm.Utilities.readReal' contains a call to impure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.OxyRHm.Utilities.UnitConversions.findUnit'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.DeoxyRHm.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.DeoxyRHm.Utilities.readReal' contains a call to impure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.DeoxyRHm.Utilities.UnitConversions.findUnit'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.OxyTHm.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.OxyTHm.Utilities.readReal' contains a call to impure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.OxyTHm.Utilities.UnitConversions.findUnit'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.DeoxyTHm.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.DeoxyTHm.Utilities.readReal' contains a call to impure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.DeoxyTHm.Utilities.UnitConversions.findUnit'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.oxygen_unbound.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.oxygen_unbound.Utilities.readReal' contains a call to impure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.oxygen_unbound.Utilities.UnitConversions.findUnit'. Notification: Performance of NFTyping.typeBindings: time 0.003011/0.2343, allocations: 1.022 MB / 415.2 MB, free: 14.85 MB / 330.7 MB [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.OxyRHm.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.OxyRHm.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.DeoxyRHm.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.DeoxyRHm.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.OxyTHm.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.OxyTHm.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.DeoxyTHm.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.DeoxyTHm.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.oxygen_unbound.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.oxygen_unbound.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'. Notification: Performance of NFTyping.typeClassSections: time 0.003722/0.238, allocations: 1.032 MB / 416.3 MB, free: 14.73 MB / 330.7 MB Notification: Performance of NFFlatten.flatten: time 0.003878/0.2419, allocations: 3.246 MB / 419.5 MB, free: 13.32 MB / 330.7 MB Notification: Performance of NFFlatten.resolveConnections: time 0.001/0.2429, allocations: 0.5656 MB / 420.1 MB, free: 13.06 MB / 330.7 MB Notification: Performance of NFEvalConstants.evaluate: time 0.003313/0.2462, allocations: 1.634 MB / 421.7 MB, free: 12.55 MB / 330.7 MB Notification: Performance of NFSimplifyModel.simplify: time 0.002824/0.249, allocations: 1.449 MB / 423.2 MB, free: 12.16 MB / 330.7 MB Notification: Performance of NFPackage.collectConstants: time 0.0007648/0.2498, allocations: 166.9 kB / 423.3 MB, free: 12.16 MB / 330.7 MB Notification: Performance of NFFlatten.collectFunctions: time 0.0008908/0.2507, allocations: 181.8 kB / 423.5 MB, free: 12.16 MB / 330.7 MB Notification: Performance of NFScalarize.scalarize: time 0.0007418/0.2514, allocations: 0.6729 MB / 424.2 MB, free: 11.85 MB / 330.7 MB Notification: Performance of NFVerifyModel.verify: time 0.001763/0.2532, allocations: 0.8625 MB / 425 MB, free: 11.55 MB / 330.7 MB Notification: Performance of NFConvertDAE.convert: time 0.004569/0.2577, allocations: 3.221 MB / 428.2 MB, free: 10.65 MB / 330.7 MB Notification: Performance of FrontEnd - DAE generated: time 5.811e-06/0.2578, allocations: 0 / 428.2 MB, free: 10.65 MB / 330.7 MB Notification: Performance of FrontEnd: time 1.684e-06/0.2578, allocations: 0 / 428.2 MB, free: 10.65 MB / 330.7 MB Notification: Performance of Transformations before backend: time 0.0001228/0.2579, allocations: 4.312 kB / 428.3 MB, free: 10.65 MB / 330.7 MB Notification: Model statistics after passing the front-end and creating the data structures used by the back-end: * Number of equations: 387 * Number of variables: 387 Notification: Performance of Generate backend data structure: time 0.008642/0.2665, allocations: 3.466 MB / 431.7 MB, free: 8.422 MB / 330.7 MB Notification: Performance of prepare preOptimizeDAE: time 4.767e-05/0.2666, allocations: 13.17 kB / 431.7 MB, free: 8.418 MB / 330.7 MB Notification: Performance of preOpt normalInlineFunction (simulation): time 0.001357/0.2679, allocations: 391.3 kB / 432.1 MB, free: 8.223 MB / 330.7 MB Notification: Performance of preOpt evaluateParameters (simulation): time 0.003959/0.2719, allocations: 1.782 MB / 433.9 MB, free: 7.145 MB / 330.7 MB Notification: Performance of preOpt simplifyIfEquations (simulation): time 0.000111/0.272, allocations: 121.8 kB / 434 MB, free: 7.09 MB / 330.7 MB Notification: Performance of preOpt expandDerOperator (simulation): time 0.0002986/0.2723, allocations: 163.8 kB / 434.2 MB, free: 7.035 MB / 330.7 MB Notification: Performance of preOpt clockPartitioning (simulation): time 0.003265/0.2756, allocations: 2.221 MB / 436.4 MB, free: 5.762 MB / 330.7 MB Notification: Performance of preOpt findStateOrder (simulation): time 3.249e-05/0.2756, allocations: 0 / 436.4 MB, free: 5.762 MB / 330.7 MB Notification: Performance of preOpt replaceEdgeChange (simulation): time 0.0001293/0.2757, allocations: 65.06 kB / 436.5 MB, free: 5.711 MB / 330.7 MB Notification: Performance of preOpt inlineArrayEqn (simulation): time 6.17e-05/0.2758, allocations: 65.38 kB / 436.5 MB, free: 5.699 MB / 330.7 MB Notification: Performance of preOpt removeEqualRHS (simulation): time 0.002748/0.2785, allocations: 2.013 MB / 438.5 MB, free: 4.352 MB / 330.7 MB Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.01257/0.2911, allocations: 6.603 MB / 445.1 MB, free: 13.61 MB / 346.7 MB Notification: Performance of preOpt comSubExp (simulation): time 0.002647/0.2937, allocations: 1.558 MB / 446.7 MB, free: 11.98 MB / 346.7 MB Notification: Performance of preOpt resolveLoops (simulation): time 0.001533/0.2953, allocations: 0.922 MB / 447.6 MB, free: 11.03 MB / 346.7 MB Notification: Performance of preOpt evalFunc (simulation): time 8.243e-05/0.2954, allocations: 16.94 kB / 447.6 MB, free: 11.02 MB / 346.7 MB Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 5.295e-05/0.2954, allocations: 51.5 kB / 447.7 MB, free: 10.95 MB / 346.7 MB Notification: Performance of pre-optimization done (n=118): time 3.506e-06/0.2954, allocations: 3.938 kB / 447.7 MB, free: 10.95 MB / 346.7 MB Notification: Performance of matching and sorting (n=183): time 0.1103/0.4057, allocations: 28.78 MB / 476.5 MB, free: 14.09 MB / 378.7 MB Notification: Performance of inlineWhenForInitialization (initialization): time 0.0002223/0.406, allocations: 257.3 kB / 476.7 MB, free: 13.79 MB / 378.7 MB Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.004321/0.4103, allocations: 2.351 MB / 479.1 MB, free: 11.41 MB / 378.7 MB Notification: Performance of collectPreVariables (initialization): time 0.0004735/0.4108, allocations: 61.7 kB / 479.1 MB, free: 11.34 MB / 378.7 MB Notification: Performance of collectInitialEqns (initialization): time 0.00117/0.4119, allocations: 1.091 MB / 480.2 MB, free: 10.24 MB / 378.7 MB Notification: Performance of collectInitialBindings (initialization): time 0.001352/0.4133, allocations: 0.6429 MB / 480.9 MB, free: 9.59 MB / 378.7 MB Notification: Performance of simplifyInitialFunctions (initialization): time 0.0009038/0.4142, allocations: 448.2 kB / 481.3 MB, free: 9.145 MB / 378.7 MB Notification: Performance of setup shared object (initialization): time 0.0001707/0.4144, allocations: 305.1 kB / 481.6 MB, free: 8.844 MB / 378.7 MB Notification: Performance of preBalanceInitialSystem (initialization): time 0.003196/0.4176, allocations: 1.733 MB / 483.3 MB, free: 7.105 MB / 378.7 MB Notification: Performance of partitionIndependentBlocks (initialization): time 0.003839/0.4214, allocations: 2.382 MB / 485.7 MB, free: 4.438 MB / 378.7 MB Notification: Performance of analyzeInitialSystem (initialization): time 0.007742/0.4291, allocations: 4.262 MB / 490 MB, free: 15.9 MB / 394.7 MB Notification: Performance of solveInitialSystemEqSystem (initialization): time 3.093e-05/0.4292, allocations: 12 kB / 490 MB, free: 15.89 MB / 394.7 MB Notification: Performance of matching and sorting (n=291) (initialization): time 0.03487/0.464, allocations: 8.601 MB / 498.6 MB, free: 7.266 MB / 394.7 MB Notification: Performance of prepare postOptimizeDAE: time 5.141e-05/0.4641, allocations: 18.97 kB / 498.6 MB, free: 7.25 MB / 394.7 MB Notification: Performance of postOpt simplifyComplexFunction (initialization): time 5.868e-05/0.4641, allocations: 20 kB / 498.6 MB, free: 7.23 MB / 394.7 MB Notification: Performance of postOpt tearingSystem (initialization): time 0.02794/0.4921, allocations: 5.256 MB / 0.4921 GB, free: 1.961 MB / 394.7 MB Notification: Performance of postOpt solveSimpleEquations (initialization): time 0.002809/0.4949, allocations: 451.3 kB / 0.4925 GB, free: 1.52 MB / 394.7 MB Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 0.05949/0.5544, allocations: 24.71 MB / 0.5166 GB, free: 8.605 MB / 426.7 MB Notification: Performance of postOpt simplifyAllExpressions (initialization): time 0.00308/0.5575, allocations: 255.5 kB / 0.5169 GB, free: 8.355 MB / 426.7 MB Notification: Performance of postOpt collapseArrayExpressions (initialization): time 0.0002734/0.5577, allocations: 88 kB / 0.517 GB, free: 8.27 MB / 426.7 MB Notification: Model statistics after passing the back-end for initialization: * Number of independent subsystems: 89 * Number of states: 0 () * Number of discrete variables: 0 () * Number of discrete states: 0 () * Number of clocked states: 0 () * Top-level inputs: 0 Notification: Strong component statistics for initialization (205): * Single equations (assignments): 203 * Array equations: 0 * Algorithm blocks: 0 * Record equations: 0 * When equations: 0 * If-equations: 0 * Equation systems (not torn): 0 * Torn equation systems: 2 * Mixed (continuous/discrete) equation systems: 0 Notification: Torn system details for strict tearing set: * Linear torn systems (#iteration vars, #inner vars, density): 1 system {(8,36,34.4%)} * Non-linear torn systems (#iteration vars, #inner vars): 1 system {(10,34)} Notification: Performance of prepare postOptimizeDAE: time 0.002157/0.5599, allocations: 0.8715 MB / 0.5178 GB, free: 7.387 MB / 426.7 MB Notification: Performance of postOpt lateInlineFunction (simulation): time 0.0007144/0.5606, allocations: 254.2 kB / 0.5181 GB, free: 7.137 MB / 426.7 MB Notification: Performance of postOpt wrapFunctionCalls (simulation): time 0.001216/0.5618, allocations: 424.6 kB / 0.5185 GB, free: 6.715 MB / 426.7 MB Notification: Performance of postOpt inlineArrayEqn (simulation): time 2.447e-05/0.5619, allocations: 20 kB / 0.5185 GB, free: 6.695 MB / 426.7 MB Notification: Performance of postOpt constantLinearSystem (simulation): time 3.333e-05/0.5619, allocations: 8 kB / 0.5185 GB, free: 6.688 MB / 426.7 MB Notification: Performance of postOpt simplifysemiLinear (simulation): time 1.937e-05/0.5619, allocations: 11.95 kB / 0.5185 GB, free: 6.676 MB / 426.7 MB Notification: Performance of postOpt removeSimpleEquations (simulation): time 0.03489/0.5968, allocations: 11.71 MB / 0.5299 GB, free: 10.71 MB / 442.7 MB Notification: Performance of postOpt simplifyComplexFunction (simulation): time 4.19e-05/0.5968, allocations: 16 kB / 0.53 GB, free: 10.69 MB / 442.7 MB Notification: Performance of postOpt solveSimpleEquations (simulation): time 0.000947/0.5978, allocations: 235.6 kB / 0.5302 GB, free: 10.46 MB / 442.7 MB Notification: Performance of postOpt tearingSystem (simulation): time 0.01912/0.6169, allocations: 4.994 MB / 0.5351 GB, free: 5.453 MB / 442.7 MB Notification: Performance of postOpt inputDerivativesUsed (simulation): time 0.0004514/0.6174, allocations: 55.98 kB / 0.5351 GB, free: 5.398 MB / 442.7 MB Notification: Performance of postOpt calculateStrongComponentJacobians (simulation): time 0.05092/0.6683, allocations: 23.71 MB / 0.5583 GB, free: 13.46 MB / 474.7 MB Notification: Performance of postOpt calculateStateSetsJacobians (simulation): time 2.794e-05/0.6683, allocations: 23.88 kB / 0.5583 GB, free: 13.44 MB / 474.7 MB Notification: Performance of postOpt symbolicJacobian (simulation): time 0.02855/0.6969, allocations: 10.76 MB / 0.5688 GB, free: 2.441 MB / 474.7 MB Notification: Performance of postOpt removeConstants (simulation): time 0.002496/0.6994, allocations: 0.625 MB / 0.5694 GB, free: 1.816 MB / 474.7 MB Notification: Performance of postOpt simplifyTimeIndepFuncCalls (simulation): time 0.000825/0.7002, allocations: 59.98 kB / 0.5695 GB, free: 1.758 MB / 474.7 MB Notification: Performance of postOpt simplifyAllExpressions (simulation): time 0.002786/0.703, allocations: 215.6 kB / 0.5697 GB, free: 1.547 MB / 474.7 MB Notification: Performance of postOpt findZeroCrossings (simulation): time 0.000954/0.7039, allocations: 272 kB / 0.5699 GB, free: 1.281 MB / 474.7 MB Notification: Performance of postOpt collapseArrayExpressions (simulation): time 0.0001857/0.7041, allocations: 64 kB / 0.57 GB, free: 1.219 MB / 474.7 MB Notification: Performance of sorting global known variables: time 0.003251/0.7074, allocations: 1.579 MB / 0.5715 GB, free: 15.62 MB / 490.7 MB Notification: Performance of sort global known variables: time 8e-08/0.7074, allocations: 0 / 0.5715 GB, free: 15.62 MB / 490.7 MB Notification: Performance of remove unused functions: time 0.005553/0.7129, allocations: 1.004 MB / 0.5725 GB, free: 14.62 MB / 490.7 MB Notification: Model statistics after passing the back-end for simulation: * Number of independent subsystems: 72 * Number of states: 7 (totalHb.state[1],T0_in_T.state[3],T0_in_T.state[2],T0_in_T.state[1],R0_in_R.state[3],R0_in_R.state[2],R0_in_R.state[1]) * Number of discrete variables: 0 () * Number of discrete states: 0 () * Number of clocked states: 0 () * Top-level inputs: 0 Notification: Strong component statistics for simulation (111): * Single equations (assignments): 109 * Array equations: 0 * Algorithm blocks: 0 * Record equations: 0 * When equations: 0 * If-equations: 0 * Equation systems (not torn): 0 * Torn equation systems: 2 * Mixed (continuous/discrete) equation systems: 0 Notification: Torn system details for strict tearing set: * Linear torn systems (#iteration vars, #inner vars, density): 1 system {(8,36,34.4%)} * Non-linear torn systems (#iteration vars, #inner vars): 1 system {(10,34)} Notification: Performance of Backend phase and start with SimCode phase: time 0.000529/0.7134, allocations: 179.6 kB / 0.5727 GB, free: 14.44 MB / 490.7 MB Notification: Performance of simCode: created initialization part: time 0.01348/0.7269, allocations: 5.337 MB / 0.5779 GB, free: 9.066 MB / 490.7 MB Notification: Performance of simCode: created event and clocks part: time 1.942e-05/0.7269, allocations: 192 / 0.5779 GB, free: 9.066 MB / 490.7 MB Notification: Performance of simCode: created simulation system equations: time 0.009776/0.7367, allocations: 3.281 MB / 0.5811 GB, free: 5.762 MB / 490.7 MB Notification: Performance of simCode: created of all other equations (e.g. parameter, nominal, assert, etc): time 0.00407/0.7408, allocations: 0.5551 MB / 0.5816 GB, free: 5.215 MB / 490.7 MB Notification: Performance of simCode: created linear, non-linear and system jacobian parts: time 0.2339/0.9747, allocations: 6.226 MB / 0.5877 GB, free: 161.6 MB / 490.7 MB Notification: Performance of simCode: some other stuff during SimCode phase: time 0.002881/0.9776, allocations: 1.553 MB / 0.5892 GB, free: 161.4 MB / 490.7 MB Notification: Performance of simCode: alias equations: time 0.001432/0.979, allocations: 0.5036 MB / 0.5897 GB, free: 161.4 MB / 490.7 MB Notification: Performance of simCode: all other stuff during SimCode phase: time 0.0003702/0.9794, allocations: 133 kB / 0.5899 GB, free: 161.4 MB / 490.7 MB Notification: Performance of SimCode: time 1.012e-06/0.9794, allocations: 1.25 kB / 0.5899 GB, free: 161.4 MB / 490.7 MB Notification: Performance of Templates: time 0.09545/1.075, allocations: 76.1 MB / 0.6642 GB, free: 104.6 MB / 490.7 MB " [Timeout remaining time 659] make -j1 -f Bodylight_Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.makefile [Timeout 660] (rm -f Bodylight_Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.pipe ; mkfifo Bodylight_Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.pipe ; head -c 1048576 < Bodylight_Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.pipe >> ../files/Bodylight_Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.sim & ./Bodylight_Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC -abortSlowSimulation -alarm=240 -lv LOG_STATS > Bodylight_Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.pipe 2>&1) [Timeout 240] [Calling os._exit(0), Time elapsed: 9.356847485061735]