Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr Chemical_master_Chemical.Examples.debug.EnzymeKinetics3.conf.json loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo): time 0.000766/0.000766, allocations: 80.44 kB / 19.17 MB, free: 0.7422 MB / 13.93 MB " [Timeout remaining time 180] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo): time 0.000735/0.000735, allocations: 170.3 kB / 22.46 MB, free: 2.105 MB / 18.57 MB " [Timeout remaining time 180] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo): time 0.8418/0.8418, allocations: 177.2 MB / 202.8 MB, free: 5.746 MB / 186.7 MB " [Timeout remaining time 179] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/package.mo): time 0.08312/0.08312, allocations: 17.45 MB / 276.6 MB, free: 11.78 MB / 266.7 MB " [Timeout remaining time 180] Using package Chemical with version 2.0.1 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/package.mo) Using package Modelica with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo) Using package Complex with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo) Using package ModelicaServices with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo) Running command: "" <> buildModelFMU(Chemical.Examples.debug.EnzymeKinetics3,fileNamePrefix="Chemical_master_Chemical_Examples_debug_EnzymeKinetics3",fmuType="me",version="2.0",platforms={"static"}) "" <> buildModelFMU(Chemical.Examples.debug.EnzymeKinetics3,fileNamePrefix="Chemical_master_Chemical_Examples_debug_EnzymeKinetics3",fmuType="me",version="2.0",platforms={"static"}) [Timeout 660] "Notification: Performance of FrontEnd - loaded program: time 1.863e-06/1.863e-06, allocations: 0 / 411.6 MB, free: 248 kB / 378.7 MB Notification: Performance of FrontEnd - Absyn->SCode: time 2.01e-05/2.196e-05, allocations: 2.281 kB / 411.6 MB, free: 244 kB / 378.7 MB [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1586:5-1586:64:writable] Warning: An inner declaration for outer component system could not be found and was automatically generated. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1586:5-1586:64:writable] Notification: The diagnostics message for the missing inner is: Your model is using an outer \"system\" component but an inner \"system\" component is not defined. For simulation drag Modelica.Fluid.System into your model to specify system properties. Notification: Performance of NFInst.instantiate(Chemical.Examples.debug.EnzymeKinetics3): time 0.2937/0.2937, allocations: 34.96 MB / 446.6 MB, free: 43.26 MB / 410.8 MB Notification: Performance of NFInst.instExpressions: time 0.009666/0.3034, allocations: 10.88 MB / 457.5 MB, free: 41.07 MB / 410.8 MB Notification: Performance of NFInst.updateImplicitVariability: time 0.001056/0.3044, allocations: 107.4 kB / 457.6 MB, free: 41.01 MB / 410.8 MB Notification: Performance of NFTyping.typeComponents: time 0.002657/0.3071, allocations: 2.078 MB / 459.6 MB, free: 39.95 MB / 410.8 MB Notification: Performance of NFTyping.typeBindings: time 0.002181/0.3093, allocations: 1.971 MB / 461.6 MB, free: 38.63 MB / 410.8 MB Notification: Performance of NFTyping.typeClassSections: time 0.003877/0.3131, allocations: 4.303 MB / 465.9 MB, free: 36.02 MB / 410.8 MB [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1332:3-1332:55:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.MM has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1333:3-1333:87:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.Hf has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1334:3-1334:81:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.H0 has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1336:3-1336:82:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.alow has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 7)) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1337:3-1337:79:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.blow has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 3)) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1338:3-1338:84:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.ahigh has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 7)) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1339:3-1339:81:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.bhigh has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 3)) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1341:3-1342:83:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.z has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1344:3-1344:89:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.phase has no value, and is fixed during initialization (fixed=true), using available start value (start=Chemical.Interfaces.Phase.Gas) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1347:3-1347:140:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.VmBase has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1348:3-1348:137:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.VmExcess has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. Notification: Performance of NFFlatten.flatten: time 0.003074/0.3162, allocations: 4.793 MB / 470.7 MB, free: 33.61 MB / 410.8 MB Notification: Performance of NFFlatten.resolveConnections: time 0.0007204/0.3169, allocations: 0.8179 MB / 471.5 MB, free: 33.17 MB / 410.8 MB Notification: Performance of NFEvalConstants.evaluate: time 0.001641/0.3186, allocations: 2.63 MB / 474.2 MB, free: 32.03 MB / 410.8 MB Notification: Performance of NFSimplifyModel.simplify: time 0.001434/0.32, allocations: 2.086 MB / 476.2 MB, free: 31.34 MB / 410.8 MB Notification: Performance of NFPackage.collectConstants: time 0.000293/0.3203, allocations: 407.5 kB / 476.6 MB, free: 31.34 MB / 410.8 MB Notification: Performance of NFFlatten.collectFunctions: time 0.002913/0.3232, allocations: 2.144 MB / 478.8 MB, free: 30.86 MB / 410.8 MB Notification: Performance of NFScalarize.scalarize: time 0.0005491/0.3238, allocations: 1.38 MB / 480.2 MB, free: 30.06 MB / 410.8 MB Notification: Performance of NFVerifyModel.verify: time 0.0009682/0.3247, allocations: 1.499 MB / 481.7 MB, free: 29.38 MB / 410.8 MB Notification: Performance of NFConvertDAE.convert: time 0.006526/0.3313, allocations: 7.465 MB / 489.1 MB, free: 26.08 MB / 410.8 MB Notification: Performance of FrontEnd - DAE generated: time 4.018e-06/0.3313, allocations: 1.375 kB / 489.1 MB, free: 26.08 MB / 410.8 MB Notification: Performance of FrontEnd: time 1.713e-06/0.3313, allocations: 3.938 kB / 489.1 MB, free: 26.07 MB / 410.8 MB Notification: Performance of Transformations before backend: time 6.696e-05/0.3313, allocations: 0.7969 kB / 489.1 MB, free: 26.07 MB / 410.8 MB Notification: Model statistics after passing the front-end and creating the data structures used by the back-end: * Number of equations: 1270 * Number of variables: 1270 Notification: Performance of Generate backend data structure: time 0.006156/0.3375, allocations: 5.418 MB / 494.6 MB, free: 23.02 MB / 410.8 MB Notification: Performance of prepare preOptimizeDAE: time 3.948e-05/0.3375, allocations: 9.438 kB / 494.6 MB, free: 23.02 MB / 410.8 MB Notification: Performance of preOpt introduceOutputAliases (simulation): time 0.0004837/0.338, allocations: 0.6246 MB / 495.2 MB, free: 22.67 MB / 410.8 MB Notification: Performance of preOpt normalInlineFunction (simulation): time 0.001876/0.3399, allocations: 1.093 MB / 496.3 MB, free: 22.21 MB / 410.8 MB Notification: Performance of preOpt evaluateParameters (simulation): time 0.00336/0.3432, allocations: 2.525 MB / 498.8 MB, free: 20.59 MB / 410.8 MB Notification: Performance of preOpt simplifyIfEquations (simulation): time 0.0003262/0.3436, allocations: 0.6357 MB / 499.4 MB, free: 20.07 MB / 410.8 MB Notification: Performance of preOpt expandDerOperator (simulation): time 0.0004553/0.344, allocations: 396.4 kB / 499.8 MB, free: 19.94 MB / 410.8 MB Notification: Performance of preOpt clockPartitioning (simulation): time 0.01064/0.3547, allocations: 15.38 MB / 0.5031 GB, free: 13.39 MB / 410.8 MB Notification: Performance of preOpt findStateOrder (simulation): time 5.156e-05/0.3547, allocations: 1.531 kB / 0.5031 GB, free: 13.39 MB / 410.8 MB Notification: Performance of preOpt replaceEdgeChange (simulation): time 0.0001953/0.3549, allocations: 159.4 kB / 0.5033 GB, free: 13.27 MB / 410.8 MB Notification: Performance of preOpt inlineArrayEqn (simulation): time 0.0003217/0.3552, allocations: 0.5927 MB / 0.5039 GB, free: 13.14 MB / 410.8 MB Notification: Performance of preOpt removeEqualRHS (simulation): time 0.01375/0.369, allocations: 27.38 MB / 0.5306 GB, free: 11.22 MB / 426.8 MB Warning: The model contains alias variables with redundant start and/or conflicting nominal values. It is recommended to resolve the conflicts, because otherwise the system could be hard to solve. To print the conflicting alias sets and the chosen candidates please use -d=aliasConflicts. Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.02896/0.3979, allocations: 26.67 MB / 0.5567 GB, free: 436 kB / 442.8 MB Notification: Performance of preOpt comSubExp (simulation): time 0.003362/0.4013, allocations: 3.58 MB / 0.5601 GB, free: 12.84 MB / 458.8 MB Notification: Performance of preOpt resolveLoops (simulation): time 0.002778/0.4041, allocations: 3.056 MB / 0.5631 GB, free: 9.777 MB / 458.8 MB Notification: Performance of preOpt evalFunc (simulation): time 0.01583/0.4199, allocations: 15.35 MB / 0.5781 GB, free: 10.39 MB / 474.8 MB Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 3.752e-05/0.4199, allocations: 56.55 kB / 0.5782 GB, free: 10.32 MB / 474.8 MB Notification: Performance of pre-optimization done (n=227): time 3.757e-06/0.42, allocations: 0 / 0.5782 GB, free: 10.32 MB / 474.8 MB Notification: Performance of matching and sorting (n=324): time 0.04388/0.4638, allocations: 29.07 MB / 0.6066 GB, free: 13.09 MB / 0.4949 GB Notification: Performance of inlineWhenForInitialization (initialization): time 5.264e-05/0.4639, allocations: 77.41 kB / 0.6066 GB, free: 13 MB / 0.4949 GB [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1348:3-1348:137:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.VmExcess has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1347:3-1347:140:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.VmBase has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1344:3-1344:89:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.phase has no value, and is fixed during initialization (fixed=true), using available start value (start=Chemical.Interfaces.Phase.Gas) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1341:3-1342:83:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.z has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1339:3-1339:81:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.bhigh[3] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1339:3-1339:81:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.bhigh[2] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1339:3-1339:81:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.bhigh[1] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1338:3-1338:84:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.ahigh[7] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1338:3-1338:84:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.ahigh[6] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1338:3-1338:84:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.ahigh[5] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1338:3-1338:84:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.ahigh[4] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1338:3-1338:84:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.ahigh[3] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1338:3-1338:84:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.ahigh[2] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1338:3-1338:84:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.ahigh[1] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1337:3-1337:79:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.blow[3] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1337:3-1337:79:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.blow[2] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1337:3-1337:79:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.blow[1] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1336:3-1336:82:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.alow[7] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1336:3-1336:82:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.alow[6] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1336:3-1336:82:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.alow[5] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1336:3-1336:82:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.alow[4] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1336:3-1336:82:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.alow[3] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1336:3-1336:82:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.alow[2] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1336:3-1336:82:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.alow[1] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1334:3-1334:81:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.H0 has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1333:3-1333:87:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.Hf has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1332:3-1332:55:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.MM has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.002365/0.4663, allocations: 2.326 MB / 0.6089 GB, free: 10.66 MB / 0.4949 GB Notification: Performance of collectPreVariables (initialization): time 0.0005172/0.4668, allocations: 65.7 kB / 0.609 GB, free: 10.59 MB / 0.4949 GB Notification: Performance of collectInitialEqns (initialization): time 0.001224/0.468, allocations: 2.281 MB / 0.6112 GB, free: 8.285 MB / 0.4949 GB Notification: Performance of collectInitialBindings (initialization): time 0.0008282/0.4688, allocations: 1.111 MB / 0.6123 GB, free: 7.164 MB / 0.4949 GB Notification: Performance of simplifyInitialFunctions (initialization): time 0.001292/0.4701, allocations: 0.9964 MB / 0.6133 GB, free: 6.16 MB / 0.4949 GB Notification: Performance of setup shared object (initialization): time 6.855e-05/0.4702, allocations: 305.1 kB / 0.6135 GB, free: 5.859 MB / 0.4949 GB Notification: Performance of preBalanceInitialSystem (initialization): time 0.004253/0.4744, allocations: 4.212 MB / 0.6177 GB, free: 1.645 MB / 0.4949 GB Notification: Performance of partitionIndependentBlocks (initialization): time 0.1624/0.6368, allocations: 5.372 MB / 0.6229 GB, free: 153 MB / 0.4949 GB Notification: It was not possible to check the given initialization system for consistency symbolically, because the relevant equations are part of an algebraic loop. This is not supported yet. Notification: Performance of analyzeInitialSystem (initialization): time 0.1937/0.8305, allocations: 74.04 MB / 0.6952 GB, free: 111 MB / 0.4949 GB Warning: It was not possible to solve the under-determined initial system (301 equations and 329 variables) Error: No system for the symbolic initialization was generated " [Timeout remaining time 659] [Calling sys.exit(0), Time elapsed: 2.4247383093461394] Failed to read output from testmodel.py, exit status != 0: 0.841572992503643 0.848059878 0.515460581 Calling exit ...