Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr Chemical_master_Chemical.Examples.debug.EnzymeKinetics2.conf.json loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo): time 0.000741/0.000741, allocations: 80.44 kB / 19.17 MB, free: 0.7422 MB / 13.93 MB " [Timeout remaining time 180] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo): time 0.000774/0.000774, allocations: 169.9 kB / 22.46 MB, free: 2.105 MB / 18.57 MB " [Timeout remaining time 180] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo): time 0.8582/0.8582, allocations: 177.1 MB / 202.8 MB, free: 5.723 MB / 186.7 MB " [Timeout remaining time 179] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/package.mo): time 0.08867/0.08867, allocations: 17.46 MB / 276.6 MB, free: 11.74 MB / 266.7 MB " [Timeout remaining time 180] Using package Chemical with version 2.0.1 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/package.mo) Using package Modelica with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo) Using package Complex with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo) Using package ModelicaServices with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo) Running command: "" <> buildModelFMU(Chemical.Examples.debug.EnzymeKinetics2,fileNamePrefix="Chemical_master_Chemical_Examples_debug_EnzymeKinetics2",fmuType="me",version="2.0",platforms={"static"}) "" <> buildModelFMU(Chemical.Examples.debug.EnzymeKinetics2,fileNamePrefix="Chemical_master_Chemical_Examples_debug_EnzymeKinetics2",fmuType="me",version="2.0",platforms={"static"}) [Timeout 660] "Notification: Performance of FrontEnd - loaded program: time 1.182e-06/1.182e-06, allocations: 0 / 411.6 MB, free: 12.46 MB / 330.7 MB Notification: Performance of FrontEnd - Absyn->SCode: time 1.826e-05/1.944e-05, allocations: 2.281 kB / 411.6 MB, free: 12.46 MB / 330.7 MB [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1586:5-1586:64:writable] Warning: An inner declaration for outer component system could not be found and was automatically generated. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1586:5-1586:64:writable] Notification: The diagnostics message for the missing inner is: Your model is using an outer \"system\" component but an inner \"system\" component is not defined. For simulation drag Modelica.Fluid.System into your model to specify system properties. Notification: Performance of NFInst.instantiate(Chemical.Examples.debug.EnzymeKinetics2): time 0.02484/0.02486, allocations: 34.99 MB / 446.6 MB, free: 5.844 MB / 346.7 MB Notification: Performance of NFInst.instExpressions: time 0.0145/0.03935, allocations: 10.89 MB / 457.5 MB, free: 12.06 MB / 362.7 MB Notification: Performance of NFInst.updateImplicitVariability: time 0.00361/0.04296, allocations: 107.1 kB / 457.6 MB, free: 11.95 MB / 362.7 MB Notification: Performance of NFTyping.typeComponents: time 0.004404/0.04737, allocations: 2.078 MB / 459.6 MB, free: 9.863 MB / 362.7 MB Notification: Performance of NFTyping.typeBindings: time 0.005583/0.05295, allocations: 1.97 MB / 461.6 MB, free: 7.879 MB / 362.7 MB Notification: Performance of NFTyping.typeClassSections: time 0.006388/0.05934, allocations: 4.306 MB / 465.9 MB, free: 3.555 MB / 362.7 MB [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1332:3-1332:55:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.MM has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1333:3-1333:87:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.Hf has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1334:3-1334:81:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.H0 has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1336:3-1336:82:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.alow has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 7)) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1337:3-1337:79:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.blow has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 3)) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1338:3-1338:84:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.ahigh has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 7)) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1339:3-1339:81:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.bhigh has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 3)) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1341:3-1342:83:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.z has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1344:3-1344:89:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.phase has no value, and is fixed during initialization (fixed=true), using available start value (start=Chemical.Interfaces.Phase.Gas) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1347:3-1347:140:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.VmBase has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1348:3-1348:137:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.VmExcess has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. Notification: Performance of NFFlatten.flatten: time 0.005484/0.06482, allocations: 4.789 MB / 470.7 MB, free: 14.74 MB / 378.7 MB Notification: Performance of NFFlatten.resolveConnections: time 0.00131/0.06613, allocations: 0.8072 MB / 471.5 MB, free: 13.87 MB / 378.7 MB Notification: Performance of NFEvalConstants.evaluate: time 0.003193/0.06933, allocations: 2.647 MB / 474.2 MB, free: 11.22 MB / 378.7 MB Notification: Performance of NFSimplifyModel.simplify: time 0.002365/0.07169, allocations: 2.073 MB / 476.2 MB, free: 9.141 MB / 378.7 MB Notification: Performance of NFPackage.collectConstants: time 0.000744/0.07243, allocations: 408 kB / 476.6 MB, free: 8.742 MB / 378.7 MB Notification: Performance of NFFlatten.collectFunctions: time 0.004115/0.07655, allocations: 2.141 MB / 478.8 MB, free: 6.598 MB / 378.7 MB Notification: Performance of NFScalarize.scalarize: time 0.0007778/0.07733, allocations: 1.374 MB / 480.2 MB, free: 5.219 MB / 378.7 MB Notification: Performance of NFVerifyModel.verify: time 0.001462/0.07879, allocations: 1.5 MB / 481.7 MB, free: 3.715 MB / 378.7 MB Notification: Performance of NFConvertDAE.convert: time 0.006622/0.08541, allocations: 7.473 MB / 489.1 MB, free: 12.22 MB / 394.7 MB Notification: Performance of FrontEnd - DAE generated: time 4.108e-06/0.08542, allocations: 0 / 489.1 MB, free: 12.22 MB / 394.7 MB Notification: Performance of FrontEnd: time 2.325e-06/0.08542, allocations: 3.984 kB / 489.1 MB, free: 12.21 MB / 394.7 MB Notification: Performance of Transformations before backend: time 7.326e-05/0.08549, allocations: 4 kB / 489.1 MB, free: 12.21 MB / 394.7 MB Notification: Model statistics after passing the front-end and creating the data structures used by the back-end: * Number of equations: 1270 * Number of variables: 1270 Notification: Performance of Generate backend data structure: time 0.006428/0.09192, allocations: 5.417 MB / 494.6 MB, free: 6.73 MB / 394.7 MB Notification: Performance of prepare preOptimizeDAE: time 4.511e-05/0.09196, allocations: 15.97 kB / 494.6 MB, free: 6.715 MB / 394.7 MB Notification: Performance of preOpt introduceOutputAliases (simulation): time 0.0004676/0.09243, allocations: 0.6238 MB / 495.2 MB, free: 6.082 MB / 394.7 MB Notification: Performance of preOpt normalInlineFunction (simulation): time 0.001589/0.09402, allocations: 1.098 MB / 496.3 MB, free: 4.98 MB / 394.7 MB Notification: Performance of preOpt evaluateParameters (simulation): time 0.002512/0.09653, allocations: 2.52 MB / 498.8 MB, free: 2.375 MB / 394.7 MB Notification: Performance of preOpt simplifyIfEquations (simulation): time 0.000327/0.09686, allocations: 0.6413 MB / 499.5 MB, free: 1.664 MB / 394.7 MB Notification: Performance of preOpt expandDerOperator (simulation): time 0.0003408/0.0972, allocations: 404.3 kB / 499.8 MB, free: 1.27 MB / 394.7 MB Notification: Performance of preOpt clockPartitioning (simulation): time 0.01224/0.1094, allocations: 15.38 MB / 0.5031 GB, free: 1.855 MB / 410.7 MB Notification: Performance of preOpt findStateOrder (simulation): time 5.247e-05/0.1095, allocations: 192 / 0.5031 GB, free: 1.855 MB / 410.7 MB Notification: Performance of preOpt replaceEdgeChange (simulation): time 0.0002111/0.1097, allocations: 159.9 kB / 0.5033 GB, free: 1.699 MB / 410.7 MB Notification: Performance of preOpt inlineArrayEqn (simulation): time 0.0003882/0.1101, allocations: 0.591 MB / 0.5039 GB, free: 1.105 MB / 410.7 MB Notification: Performance of preOpt removeEqualRHS (simulation): time 0.01806/0.1282, allocations: 27.37 MB / 0.5306 GB, free: 5.711 MB / 442.7 MB Warning: The model contains alias variables with redundant start and/or conflicting nominal values. It is recommended to resolve the conflicts, because otherwise the system could be hard to solve. To print the conflicting alias sets and the chosen candidates please use -d=aliasConflicts. Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.02717/0.1553, allocations: 26.67 MB / 0.5566 GB, free: 10.89 MB / 474.7 MB Notification: Performance of preOpt comSubExp (simulation): time 0.003582/0.1589, allocations: 3.58 MB / 0.5601 GB, free: 7.301 MB / 474.7 MB Notification: Performance of preOpt resolveLoops (simulation): time 0.002561/0.1615, allocations: 3.067 MB / 0.5631 GB, free: 4.23 MB / 474.7 MB Notification: Performance of preOpt evalFunc (simulation): time 0.01542/0.1769, allocations: 15.34 MB / 0.5781 GB, free: 4.84 MB / 490.7 MB Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 3.846e-05/0.1769, allocations: 52.5 kB / 0.5782 GB, free: 4.777 MB / 490.7 MB Notification: Performance of pre-optimization done (n=227): time 3.486e-06/0.1769, allocations: 0 / 0.5782 GB, free: 4.777 MB / 490.7 MB Notification: Performance of matching and sorting (n=324): time 0.1971/0.3741, allocations: 29.05 MB / 0.6065 GB, free: 144.4 MB / 490.7 MB Notification: Performance of inlineWhenForInitialization (initialization): time 4.419e-05/0.3741, allocations: 78.81 kB / 0.6066 GB, free: 144.3 MB / 490.7 MB [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1348:3-1348:137:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.VmExcess has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1347:3-1347:140:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.VmBase has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1344:3-1344:89:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.phase has no value, and is fixed during initialization (fixed=true), using available start value (start=Chemical.Interfaces.Phase.Gas) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1341:3-1342:83:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.z has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1339:3-1339:81:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.bhigh[3] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1339:3-1339:81:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.bhigh[2] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1339:3-1339:81:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.bhigh[1] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1338:3-1338:84:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.ahigh[7] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1338:3-1338:84:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.ahigh[6] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1338:3-1338:84:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.ahigh[5] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1338:3-1338:84:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.ahigh[4] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1338:3-1338:84:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.ahigh[3] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1338:3-1338:84:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.ahigh[2] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1338:3-1338:84:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.ahigh[1] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1337:3-1337:79:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.blow[3] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1337:3-1337:79:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.blow[2] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1337:3-1337:79:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.blow[1] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1336:3-1336:82:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.alow[7] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1336:3-1336:82:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.alow[6] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1336:3-1336:82:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.alow[5] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1336:3-1336:82:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.alow[4] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1336:3-1336:82:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.alow[3] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1336:3-1336:82:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.alow[2] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1336:3-1336:82:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.alow[1] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1334:3-1334:81:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.H0 has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1333:3-1333:87:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.Hf has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1332:3-1332:55:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.MM has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.00201/0.3761, allocations: 2.32 MB / 0.6089 GB, free: 143.5 MB / 490.7 MB Notification: Performance of collectPreVariables (initialization): time 0.0008554/0.377, allocations: 72.72 kB / 0.609 GB, free: 143.4 MB / 490.7 MB Notification: Performance of collectInitialEqns (initialization): time 0.0007301/0.3777, allocations: 2.285 MB / 0.6112 GB, free: 142 MB / 490.7 MB Notification: Performance of collectInitialBindings (initialization): time 0.0007645/0.3785, allocations: 1.113 MB / 0.6123 GB, free: 141.1 MB / 490.7 MB Notification: Performance of simplifyInitialFunctions (initialization): time 0.001083/0.3796, allocations: 0.9948 MB / 0.6132 GB, free: 140.8 MB / 490.7 MB Notification: Performance of setup shared object (initialization): time 3.042e-05/0.3796, allocations: 301.1 kB / 0.6135 GB, free: 140.5 MB / 490.7 MB Notification: Performance of preBalanceInitialSystem (initialization): time 0.00333/0.3829, allocations: 4.209 MB / 0.6176 GB, free: 138.5 MB / 490.7 MB Notification: Performance of partitionIndependentBlocks (initialization): time 0.003517/0.3864, allocations: 5.38 MB / 0.6229 GB, free: 132.8 MB / 490.7 MB Notification: It was not possible to check the given initialization system for consistency symbolically, because the relevant equations are part of an algebraic loop. This is not supported yet. Notification: Performance of analyzeInitialSystem (initialization): time 0.1851/0.5715, allocations: 74.03 MB / 0.6952 GB, free: 59.18 MB / 490.7 MB Warning: It was not possible to solve the under-determined initial system (301 equations and 329 variables) Error: No system for the symbolic initialization was generated " [Timeout remaining time 659] [Calling sys.exit(0), Time elapsed: 2.2648454681038857] Failed to read output from testmodel.py, exit status != 0: 0.7150090457871556 0.5899492580000001 0.5031089400000001 Calling exit ...