Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr Chemical_master_Chemical.Examples.SimpleReactionsWithJunction.conf.json
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo): time 0.000743/0.000743, allocations: 80.44 kB / 19.17 MB, free: 0.7461 MB / 13.93 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo): time 0.0007411/0.0007411, allocations: 165.9 kB / 22.46 MB, free: 2.109 MB / 18.57 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo): time 0.8746/0.8746, allocations: 177.1 MB / 202.8 MB, free: 5.742 MB / 186.7 MB
"
[Timeout remaining time 179]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/package.mo): time 0.08426/0.08426, allocations: 17.45 MB / 276.6 MB, free: 11.76 MB / 266.7 MB
"
[Timeout remaining time 180]
Using package Chemical with version 2.0.1 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/package.mo)
Using package Modelica with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo)
Using package Complex with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo)
Using package ModelicaServices with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo)
Running command: "" <> buildModelFMU(Chemical.Examples.SimpleReactionsWithJunction,fileNamePrefix="Chemical_master_Chemical_Examples_SimpleReactionsWithJunction",fmuType="me",version="2.0",platforms={"static"})
"" <> buildModelFMU(Chemical.Examples.SimpleReactionsWithJunction,fileNamePrefix="Chemical_master_Chemical_Examples_SimpleReactionsWithJunction",fmuType="me",version="2.0",platforms={"static"}) [Timeout 660]
"Notification: Performance of FrontEnd - loaded program: time 1.843e-06/1.843e-06, allocations: 0 / 411.6 MB, free: 12.47 MB / 330.7 MB
Notification: Performance of FrontEnd - Absyn->SCode: time 1.818e-05/2.002e-05, allocations: 7.547 kB / 411.6 MB, free: 12.46 MB / 330.7 MB
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Processes.mo:1084:7-1084:40:writable] Warning: An inner declaration for outer component dropOfCommons could not be found and was automatically generated.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Processes.mo:1084:7-1084:40:writable] Notification: The diagnostics message for the missing inner is: 
Your model is using an outer \"dropOfCommons\" component but
an inner \"dropOfCommons\" component is not defined.
Use Chemical.DropOfCommons in your model
to specify system properties.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1731:7-1731:66:writable] Warning: An inner declaration for outer component system could not be found and was automatically generated.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1731:7-1731:66:writable] Notification: The diagnostics message for the missing inner is: 
Your model is using an outer \"system\" component but
an inner \"system\" component is not defined.
For simulation drag Modelica.Fluid.System into your model
to specify system properties.
Notification: Performance of NFInst.instantiate(Chemical.Examples.SimpleReactionsWithJunction): time 0.03434/0.03436, allocations: 41.63 MB / 453.2 MB, free: 15.75 MB / 362.7 MB
Notification: Performance of NFInst.instExpressions: time 0.02082/0.05518, allocations: 12.99 MB / 466.2 MB, free: 3.293 MB / 362.7 MB
Notification: Performance of NFInst.updateImplicitVariability: time 0.007607/0.06279, allocations: 150.9 kB / 466.3 MB, free: 3.145 MB / 362.7 MB
Notification: Performance of NFTyping.typeComponents: time 0.006208/0.069, allocations: 2.59 MB / 468.9 MB, free: 0.5391 MB / 362.7 MB
Notification: Performance of NFTyping.typeBindings: time 0.00816/0.07716, allocations: 2.846 MB / 471.8 MB, free: 13.67 MB / 378.7 MB
Notification: Performance of NFTyping.typeClassSections: time 0.007999/0.08516, allocations: 4.875 MB / 476.6 MB, free: 8.777 MB / 378.7 MB
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1332:3-1332:55:writable] Warning: Parameter r.nextProducts[1].data.MM has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1333:3-1333:87:writable] Warning: Parameter r.nextProducts[1].data.Hf has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1334:3-1334:81:writable] Warning: Parameter r.nextProducts[1].data.H0 has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1336:3-1336:82:writable] Warning: Parameter r.nextProducts[1].data.alow has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 7)) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1337:3-1337:79:writable] Warning: Parameter r.nextProducts[1].data.blow has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 3)) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1338:3-1338:84:writable] Warning: Parameter r.nextProducts[1].data.ahigh has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 7)) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1339:3-1339:81:writable] Warning: Parameter r.nextProducts[1].data.bhigh has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 3)) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1341:3-1342:83:writable] Warning: Parameter r.nextProducts[1].data.z has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1344:3-1344:89:writable] Warning: Parameter r.nextProducts[1].data.phase has no value, and is fixed during initialization (fixed=true), using available start value (start=Chemical.Interfaces.Phase.Gas) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1347:3-1347:140:writable] Warning: Parameter r.nextProducts[1].data.VmBase has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1348:3-1348:137:writable] Warning: Parameter r.nextProducts[1].data.VmExcess has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1332:3-1332:55:writable] Warning: Parameter r1.nextProducts[1].data.MM has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1333:3-1333:87:writable] Warning: Parameter r1.nextProducts[1].data.Hf has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1334:3-1334:81:writable] Warning: Parameter r1.nextProducts[1].data.H0 has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1336:3-1336:82:writable] Warning: Parameter r1.nextProducts[1].data.alow has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 7)) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1337:3-1337:79:writable] Warning: Parameter r1.nextProducts[1].data.blow has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 3)) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1338:3-1338:84:writable] Warning: Parameter r1.nextProducts[1].data.ahigh has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 7)) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1339:3-1339:81:writable] Warning: Parameter r1.nextProducts[1].data.bhigh has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 3)) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1341:3-1342:83:writable] Warning: Parameter r1.nextProducts[1].data.z has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1344:3-1344:89:writable] Warning: Parameter r1.nextProducts[1].data.phase has no value, and is fixed during initialization (fixed=true), using available start value (start=Chemical.Interfaces.Phase.Gas) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1347:3-1347:140:writable] Warning: Parameter r1.nextProducts[1].data.VmBase has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1348:3-1348:137:writable] Warning: Parameter r1.nextProducts[1].data.VmExcess has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1332:3-1332:55:writable] Warning: Parameter r_ref.nextProducts[1].data.MM has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1333:3-1333:87:writable] Warning: Parameter r_ref.nextProducts[1].data.Hf has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1334:3-1334:81:writable] Warning: Parameter r_ref.nextProducts[1].data.H0 has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1336:3-1336:82:writable] Warning: Parameter r_ref.nextProducts[1].data.alow has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 7)) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1337:3-1337:79:writable] Warning: Parameter r_ref.nextProducts[1].data.blow has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 3)) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1338:3-1338:84:writable] Warning: Parameter r_ref.nextProducts[1].data.ahigh has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 7)) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1339:3-1339:81:writable] Warning: Parameter r_ref.nextProducts[1].data.bhigh has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 3)) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1341:3-1342:83:writable] Warning: Parameter r_ref.nextProducts[1].data.z has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1344:3-1344:89:writable] Warning: Parameter r_ref.nextProducts[1].data.phase has no value, and is fixed during initialization (fixed=true), using available start value (start=Chemical.Interfaces.Phase.Gas) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1347:3-1347:140:writable] Warning: Parameter r_ref.nextProducts[1].data.VmBase has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1348:3-1348:137:writable] Warning: Parameter r_ref.nextProducts[1].data.VmExcess has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value.
Notification: Performance of NFFlatten.flatten: time 0.009711/0.09487, allocations: 7.504 MB / 484.2 MB, free: 1.242 MB / 378.7 MB
Notification: Performance of NFFlatten.resolveConnections: time 0.002238/0.0971, allocations: 1.688 MB / 485.8 MB, free: 15.47 MB / 394.7 MB
Notification: Performance of NFEvalConstants.evaluate: time 0.005142/0.1022, allocations: 4.554 MB / 490.4 MB, free: 10.91 MB / 394.7 MB
Notification: Performance of NFSimplifyModel.simplify: time 0.004313/0.1066, allocations: 3.519 MB / 493.9 MB, free: 7.383 MB / 394.7 MB
Notification: Performance of NFPackage.collectConstants: time 0.001244/0.1078, allocations: 0.7422 MB / 494.7 MB, free: 6.641 MB / 394.7 MB
Notification: Performance of NFFlatten.collectFunctions: time 0.004461/0.1123, allocations: 2.566 MB / 497.2 MB, free: 4.07 MB / 394.7 MB
Notification: Performance of NFScalarize.scalarize: time 0.002055/0.1143, allocations: 2.461 MB / 499.7 MB, free: 1.602 MB / 394.7 MB
Notification: Performance of NFVerifyModel.verify: time 0.002871/0.1172, allocations: 2.572 MB / 0.4905 GB, free: 15.02 MB / 410.7 MB
Notification: Performance of NFConvertDAE.convert: time 0.01153/0.1287, allocations: 12.2 MB / 0.5024 GB, free: 2.785 MB / 410.7 MB
Notification: Performance of FrontEnd - DAE generated: time 4.709e-06/0.1287, allocations: 3.938 kB / 0.5024 GB, free: 2.781 MB / 410.7 MB
Notification: Performance of FrontEnd: time 2.134e-06/0.1287, allocations: 4 kB / 0.5024 GB, free: 2.777 MB / 410.7 MB
Notification: Performance of Transformations before backend: time 0.0002786/0.129, allocations: 0 / 0.5024 GB, free: 2.777 MB / 410.7 MB
Notification: Model statistics after passing the front-end and creating the data structures used by the back-end:
 * Number of equations: 2093
 * Number of variables: 2093
Notification: Performance of Generate backend data structure: time 0.01314/0.1421, allocations: 8.823 MB / 0.511 GB, free: 9.871 MB / 426.7 MB
Notification: Performance of prepare preOptimizeDAE: time 4.842e-05/0.1422, allocations: 8.031 kB / 0.511 GB, free: 9.863 MB / 426.7 MB
Notification: Performance of preOpt introduceOutputAliases (simulation): time 0.001211/0.1434, allocations: 1.02 MB / 0.512 GB, free: 8.832 MB / 426.7 MB
Notification: Performance of preOpt normalInlineFunction (simulation): time 0.003561/0.147, allocations: 2.005 MB / 0.514 GB, free: 6.82 MB / 426.7 MB
Notification: Performance of preOpt evaluateParameters (simulation): time 0.00537/0.1523, allocations: 3.894 MB / 0.5178 GB, free: 2.848 MB / 426.7 MB
Notification: Performance of preOpt simplifyIfEquations (simulation): time 0.0006388/0.153, allocations: 1.109 MB / 0.5189 GB, free: 1.605 MB / 426.7 MB
Notification: Performance of preOpt expandDerOperator (simulation): time 0.001042/0.154, allocations: 0.6448 MB / 0.5195 GB, free: 0.9609 MB / 426.7 MB
Notification: Performance of preOpt clockPartitioning (simulation): time 0.02203/0.176, allocations: 22.52 MB / 0.5415 GB, free: 10.37 MB / 458.7 MB
Notification: Performance of preOpt findStateOrder (simulation): time 7.627e-05/0.1761, allocations: 4.188 kB / 0.5415 GB, free: 10.36 MB / 458.7 MB
Notification: Performance of preOpt replaceEdgeChange (simulation): time 0.0004114/0.1765, allocations: 271.9 kB / 0.5417 GB, free: 10.1 MB / 458.7 MB
Notification: Performance of preOpt inlineArrayEqn (simulation): time 0.0005721/0.1771, allocations: 0.8345 MB / 0.5426 GB, free: 9.258 MB / 458.7 MB
Notification: Performance of preOpt removeEqualRHS (simulation): time 0.02963/0.2067, allocations: 37.29 MB / 0.579 GB, free: 3.934 MB / 490.7 MB
Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.1977/0.4044, allocations: 46.59 MB / 0.6245 GB, free: 124.7 MB / 490.7 MB
Notification: Performance of preOpt comSubExp (simulation): time 0.006299/0.4107, allocations: 6.956 MB / 0.6313 GB, free: 119.1 MB / 490.7 MB
Notification: Performance of preOpt resolveLoops (simulation): time 0.004701/0.4154, allocations: 5.923 MB / 0.6371 GB, free: 113.2 MB / 490.7 MB
Notification: Performance of preOpt evalFunc (simulation): time 0.02276/0.4382, allocations: 29.59 MB / 0.6659 GB, free: 83.86 MB / 490.7 MB
Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 2.918e-05/0.4382, allocations: 65.55 kB / 0.666 GB, free: 83.78 MB / 490.7 MB
Notification: Performance of pre-optimization done (n=440): time 4.809e-06/0.4382, allocations: 3.938 kB / 0.666 GB, free: 83.78 MB / 490.7 MB
Error: Internal error IndexReduction.pantelidesIndexReduction failed! System is structurally singular and cannot be handled because the number of unassigned equations is larger than the number of states. Use -d=bltdump to get more information.
Error: Internal error Transformation Module PFPlusExt index Reduction Method Pantelides failed!
"
[Timeout remaining time 660]
[Calling sys.exit(0), Time elapsed: 2.1630374528467655]
Failed to read output from testmodel.py, exit status != 0:
0.607944967225194 0.478026056 0.34792459899999995
Calling exit ...
<OMPython.OMCSessionZMQ object at 0x743d1e10dca0>