Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr Chemical_Chemical.Obsolete.Examples.Hemoglobin.Joels57.conf.json
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo): time 0.001092/0.001092, allocations: 80.44 kB / 19.17 MB, free: 0.7422 MB / 13.93 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo): time 0.001285/0.001285, allocations: 169.9 kB / 22.46 MB, free: 2.105 MB / 18.57 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo): time 0.8619/0.8619, allocations: 177.1 MB / 202.8 MB, free: 5.742 MB / 186.7 MB
"
[Timeout remaining time 179]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/package.mo): time 0.08453/0.08453, allocations: 17.37 MB / 276.6 MB, free: 11.84 MB / 266.7 MB
"
[Timeout remaining time 180]
Using package Chemical with version 2.0.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/package.mo)
Using package Modelica with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo)
Using package Complex with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo)
Using package ModelicaServices with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo)
Running command: "" <> buildModelFMU(Chemical.Obsolete.Examples.Hemoglobin.Joels57,fileNamePrefix="Chemical_Chemical_Obsolete_Examples_Hemoglobin_Joels57",fmuType="me",version="2.0",platforms={"static"})
"" <> buildModelFMU(Chemical.Obsolete.Examples.Hemoglobin.Joels57,fileNamePrefix="Chemical_Chemical_Obsolete_Examples_Hemoglobin_Joels57",fmuType="me",version="2.0",platforms={"static"}) [Timeout 660]
"Notification: Performance of FrontEnd - loaded program: time 1.634e-06/1.634e-06, allocations: 0 / 411.4 MB, free: 13.25 MB / 330.7 MB
Notification: Performance of FrontEnd - Absyn->SCode: time 1.843e-05/2.006e-05, allocations: 2.844 kB / 411.4 MB, free: 13.25 MB / 330.7 MB
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/Obsolete.mo:14337:7-14337:66:writable] Warning: An inner declaration for outer component system could not be found and was automatically generated.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/Obsolete.mo:14337:7-14337:66:writable] Notification: The diagnostics message for the missing inner is: 
Your model is using an outer \"system\" component but
an inner \"system\" component is not defined.
For simulation drag Modelica.Fluid.System into your model
to specify system properties.
Notification: Performance of NFInst.instantiate(Chemical.Obsolete.Examples.Hemoglobin.Joels57): time 0.05522/0.05524, allocations: 74.38 MB / 485.8 MB, free: 15.9 MB / 394.7 MB
Notification: Performance of NFInst.instExpressions: time 0.3565/0.4118, allocations: 191.2 MB / 0.6612 GB, free: 16.17 MB / 490.7 MB
Notification: Performance of NFInst.updateImplicitVariability: time 0.01047/0.4222, allocations: 231.8 kB / 0.6614 GB, free: 16.17 MB / 490.7 MB
Notification: Performance of NFTyping.typeComponents: time 0.008437/0.4307, allocations: 4.506 MB / 0.6658 GB, free: 14.66 MB / 490.7 MB
Notification: Performance of NFTyping.typeBindings: time 0.03563/0.4663, allocations: 18.51 MB / 0.6839 GB, free: 5.512 MB / 490.7 MB
Notification: Performance of NFTyping.typeClassSections: time 0.06218/0.5285, allocations: 33.5 MB / 0.7166 GB, free: 12.5 MB / 0.5105 GB
Notification: Performance of NFFlatten.flatten: time 0.06474/0.5932, allocations: 91.38 MB / 0.8058 GB, free: 2.125 MB / 0.5886 GB
Notification: Performance of NFFlatten.resolveConnections: time 0.2885/0.8817, allocations: 52.22 MB / 0.8568 GB, free: 21.27 MB / 0.6042 GB
Notification: Performance of NFEvalConstants.evaluate: time 0.107/0.9887, allocations: 75.67 MB / 0.9307 GB, free: 7.848 MB / 0.6042 GB
Notification: Performance of NFSimplifyModel.simplify: time 0.08356/1.072, allocations: 50.96 MB / 0.9805 GB, free: 14.91 MB / 0.6511 GB
Notification: Performance of NFPackage.collectConstants: time 0.03574/1.108, allocations: 12.2 MB / 0.9924 GB, free: 2.711 MB / 0.6511 GB
Notification: Performance of NFFlatten.collectFunctions: time 0.09388/1.202, allocations: 34.1 MB / 1.026 GB, free: 2.883 MB / 0.6823 GB
Notification: Performance of NFScalarize.scalarize: time 0.04003/1.242, allocations: 24.25 MB / 1.049 GB, free: 14.06 MB / 0.7136 GB
Notification: Performance of NFVerifyModel.verify: time 0.6061/1.848, allocations: 31.1 MB / 1.08 GB, free: 53.36 MB / 0.7137 GB
Notification: Performance of NFConvertDAE.convert: time 0.2082/2.056, allocations: 168.9 MB / 1.245 GB, free: 18.59 MB / 0.7137 GB
Notification: Performance of FrontEnd - DAE generated: time 8.466e-06/2.056, allocations: 0.75 kB / 1.245 GB, free: 18.59 MB / 0.7137 GB
Notification: Performance of FrontEnd: time 1.633e-06/2.056, allocations: 0 / 1.245 GB, free: 18.59 MB / 0.7137 GB
Notification: Performance of Transformations before backend: time 0.003555/2.06, allocations: 0.75 kB / 1.245 GB, free: 18.59 MB / 0.7137 GB
Notification: Model statistics after passing the front-end and creating the data structures used by the back-end:
 * Number of equations: 11424
 * Number of variables: 11424
Notification: Performance of Generate backend data structure: time 0.2328/2.293, allocations: 71.18 MB / 1.314 GB, free: 7.902 MB / 0.7605 GB
Notification: Performance of prepare preOptimizeDAE: time 5.248e-05/2.293, allocations: 10.77 kB / 1.314 GB, free: 7.895 MB / 0.7605 GB
Notification: Performance of preOpt introduceOutputAliases (simulation): time 0.03639/2.329, allocations: 5.951 MB / 1.32 GB, free: 1.93 MB / 0.7605 GB
Notification: Performance of preOpt normalInlineFunction (simulation): time 0.06608/2.395, allocations: 11.95 MB / 1.332 GB, free: 5.938 MB / 0.7762 GB
Notification: Performance of preOpt evaluateParameters (simulation): time 0.3993/2.794, allocations: 42.62 MB / 1.373 GB, free: 247.7 MB / 0.7918 GB
Notification: Performance of preOpt simplifyIfEquations (simulation): time 0.006045/2.8, allocations: 9.242 MB / 1.382 GB, free: 240.9 MB / 0.7918 GB
Notification: Performance of preOpt expandDerOperator (simulation): time 0.03925/2.84, allocations: 4.591 MB / 1.387 GB, free: 240.9 MB / 0.7918 GB
Notification: Performance of preOpt clockPartitioning (simulation): time 0.2807/3.12, allocations: 112.9 MB / 1.497 GB, free: 198.9 MB / 0.7918 GB
Notification: Performance of preOpt findStateOrder (simulation): time 0.002298/3.123, allocations: 29.62 kB / 1.497 GB, free: 198.9 MB / 0.7918 GB
Notification: Performance of preOpt replaceEdgeChange (simulation): time 0.03326/3.156, allocations: 1.759 MB / 1.499 GB, free: 197.5 MB / 0.7918 GB
Notification: Performance of preOpt inlineArrayEqn (simulation): time 0.0006215/3.157, allocations: 1.059 MB / 1.5 GB, free: 197.5 MB / 0.7918 GB
Notification: Performance of preOpt removeEqualRHS (simulation): time 0.2392/3.396, allocations: 153 MB / 1.649 GB, free: 45.04 MB / 0.7918 GB
Warning: The model contains alias variables with redundant start and/or conflicting nominal values. It is recommended to resolve the conflicts, because otherwise the system could be hard to solve. To print the conflicting alias sets and the chosen candidates please use -d=aliasConflicts.
Notification: Performance of preOpt removeSimpleEquations (simulation): time 1.195/4.591, allocations: 394.8 MB / 2.035 GB, free: 184.1 MB / 0.7918 GB
Notification: Performance of preOpt comSubExp (simulation): time 1.436/6.027, allocations: 0.6474 GB / 2.682 GB, free: 43.8 MB / 0.7918 GB
Notification: Performance of preOpt resolveLoops (simulation): time 0.3685/6.395, allocations: 60.06 MB / 2.741 GB, free: 216.5 MB / 0.7918 GB
Notification: Performance of preOpt evalFunc (simulation): time 0.3603/6.756, allocations: 255 MB / 2.99 GB, free: 67.17 MB / 0.7918 GB
Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 0.000203/6.756, allocations: 344.5 kB / 2.99 GB, free: 66.82 MB / 0.7918 GB
Notification: Performance of preOpt simplifyInStream (simulation): time 0.05731/6.813, allocations: 29.34 MB / 3.019 GB, free: 39.16 MB / 0.7918 GB
Notification: Performance of pre-optimization done (n=2985): time 0.0001424/6.813, allocations: 2.125 kB / 3.019 GB, free: 39.16 MB / 0.7918 GB
Notification: Performance of matching and sorting (n=3387): time 1.692/8.505, allocations: 423.8 MB / 3.433 GB, free: 188.4 MB / 0.7918 GB
Notification: Performance of inlineWhenForInitialization (initialization): time 0.0002158/8.505, allocations: 449.2 kB / 3.433 GB, free: 188.2 MB / 0.7918 GB
Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.04388/8.549, allocations: 33.04 MB / 3.465 GB, free: 180.4 MB / 0.7918 GB
Notification: Performance of collectPreVariables (initialization): time 0.01312/8.562, allocations: 0.5659 MB / 3.466 GB, free: 180 MB / 0.7918 GB
Notification: Performance of collectInitialEqns (initialization): time 0.01243/8.575, allocations: 21.64 MB / 3.487 GB, free: 166.7 MB / 0.7918 GB
Notification: Performance of collectInitialBindings (initialization): time 0.01917/8.594, allocations: 12.26 MB / 3.499 GB, free: 157 MB / 0.7918 GB
Notification: Performance of simplifyInitialFunctions (initialization): time 0.03572/8.63, allocations: 9.863 MB / 3.509 GB, free: 153.3 MB / 0.7918 GB
Notification: Performance of setup shared object (initialization): time 3.336e-05/8.63, allocations: 306.4 kB / 3.509 GB, free: 153 MB / 0.7918 GB
Notification: Performance of preBalanceInitialSystem (initialization): time 0.05205/8.682, allocations: 39.05 MB / 3.547 GB, free: 135.4 MB / 0.7918 GB
Notification: Performance of partitionIndependentBlocks (initialization): time 0.05724/8.739, allocations: 53.24 MB / 3.599 GB, free: 94.88 MB / 0.7918 GB
Notification: Performance of analyzeInitialSystem (initialization): time 0.4065/9.146, allocations: 96.36 MB / 3.693 GB, free: 165.3 MB / 0.7918 GB
Notification: Performance of solveInitialSystemEqSystem (initialization): time 0.0004331/9.146, allocations: 131.3 kB / 3.693 GB, free: 165.3 MB / 0.7918 GB
Notification: Performance of matching and sorting (n=5667) (initialization): time 0.7256/9.872, allocations: 257.3 MB / 3.945 GB, free: 38.9 MB / 0.7918 GB
Notification: Performance of prepare postOptimizeDAE: time 0.000229/9.872, allocations: 196 kB / 3.945 GB, free: 38.71 MB / 0.7918 GB
Notification: Performance of postOpt simplifyComplexFunction (initialization): time 0.0004775/9.872, allocations: 444 kB / 3.945 GB, free: 38.28 MB / 0.7918 GB
Notification: Performance of postOpt tearingSystem (initialization): time 0.3989/10.27, allocations: 73.71 MB / 4.017 GB, free: 155.7 MB / 0.7918 GB
Notification: Performance of postOpt solveSimpleEquations (initialization): time 0.0338/10.31, allocations: 11.18 MB / 4.028 GB, free: 155.6 MB / 0.7918 GB
Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 0.6376/10.94, allocations: 309.8 MB / 4.331 GB, free: 140.3 MB / 0.7918 GB
Notification: Performance of postOpt simplifyAllExpressions (initialization): time 0.0384/10.98, allocations: 2.479 MB / 4.333 GB, free: 140.3 MB / 0.7918 GB
Notification: Performance of postOpt collapseArrayExpressions (initialization): time 0.0133/10.99, allocations: 2.795 MB / 4.336 GB, free: 140.3 MB / 0.7918 GB
Notification: Model statistics after passing the back-end for initialization:
 * Number of independent subsystems: 2031
 * Number of states: 0 ()
 * Number of discrete variables: 0 ()
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for initialization (5523):
 * Single equations (assignments): 5514
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 0
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 9
 * Mixed (continuous/discrete) equation systems: 0
Notification: Torn system details for strict tearing set:
 * Linear torn systems (#iteration vars, #inner vars, density): 6 systems
   {(1,3,100.0%), (33,10,82.4%), (1,3,100.0%), (33,10,82.4%), (1,3,100.0%), (33,10,82.4%)}
 * Non-linear torn systems (#iteration vars, #inner vars): 3 systems
   {(1,3), (1,3), (1,3)}
Notification: Performance of prepare postOptimizeDAE: time 0.03969/11.03, allocations: 18.33 MB / 4.354 GB, free: 135.2 MB / 0.7918 GB
Notification: Performance of postOpt lateInlineFunction (simulation): time 0.01273/11.05, allocations: 3.324 MB / 4.357 GB, free: 135.2 MB / 0.7918 GB
Notification: Performance of postOpt wrapFunctionCalls (simulation): time 0.4534/11.5, allocations: 152.5 MB / 4.506 GB, free: 64.77 MB / 0.7918 GB
Notification: Performance of postOpt inlineArrayEqn (simulation): time 0.0002762/11.5, allocations: 360 kB / 4.506 GB, free: 64.42 MB / 0.7918 GB
Notification: Performance of postOpt constantLinearSystem (simulation): time 0.0003787/11.5, allocations: 52 kB / 4.506 GB, free: 64.37 MB / 0.7918 GB
Notification: Performance of postOpt simplifysemiLinear (simulation): time 0.001136/11.5, allocations: 185.7 kB / 4.506 GB, free: 64.19 MB / 0.7918 GB
Notification: Performance of postOpt removeSimpleEquations (simulation): time 0.9218/12.42, allocations: 228.8 MB / 4.73 GB, free: 111.2 MB / 0.7918 GB
Notification: Performance of postOpt simplifyComplexFunction (simulation): time 0.0003004/12.42, allocations: 7.688 kB / 4.73 GB, free: 111.2 MB / 0.7918 GB
Notification: Performance of postOpt solveSimpleEquations (simulation): time 0.02645/12.45, allocations: 7.253 MB / 4.737 GB, free: 110.5 MB / 0.7918 GB
Notification: Performance of postOpt tearingSystem (simulation): time 0.05566/12.51, allocations: 39.75 MB / 4.776 GB, free: 88.99 MB / 0.7918 GB
Notification: Performance of postOpt inputDerivativesUsed (simulation): time 0.01023/12.52, allocations: 1.448 MB / 4.777 GB, free: 87.54 MB / 0.7918 GB
Notification: Performance of postOpt calculateStrongComponentJacobians (simulation): time 0.5037/13.02, allocations: 155.8 MB / 4.929 GB, free: 135.1 MB / 0.7918 GB
Notification: Performance of postOpt calculateStateSetsJacobians (simulation): time 1.089e-05/13.02, allocations: 19.97 kB / 4.929 GB, free: 135.1 MB / 0.7918 GB
Notification: Performance of postOpt symbolicJacobian (simulation): time 0.5048/13.53, allocations: 200.4 MB / 5.125 GB, free: 31.15 MB / 0.7918 GB
Notification: Performance of postOpt removeConstants (simulation): time 0.02786/13.55, allocations: 11.56 MB / 5.136 GB, free: 21.02 MB / 0.7918 GB
Notification: Performance of postOpt simplifyTimeIndepFuncCalls (simulation): time 0.01652/13.57, allocations: 0.9177 MB / 5.137 GB, free: 20.1 MB / 0.7918 GB
Notification: Performance of postOpt simplifyAllExpressions (simulation): time 0.02923/13.6, allocations: 1.545 MB / 5.139 GB, free: 18.55 MB / 0.7918 GB
Notification: Performance of postOpt findZeroCrossings (simulation): time 0.02232/13.62, allocations: 4.682 MB / 5.143 GB, free: 13.86 MB / 0.7918 GB
Notification: Performance of postOpt collapseArrayExpressions (simulation): time 0.006719/13.63, allocations: 1.391 MB / 5.145 GB, free: 12.46 MB / 0.7918 GB
Notification: Performance of sorting global known variables: time 0.3538/13.98, allocations: 22.46 MB / 5.167 GB, free: 134.6 MB / 0.7918 GB
Notification: Performance of sort global known variables: time 5.11e-07/13.98, allocations: 0 / 5.167 GB, free: 134.6 MB / 0.7918 GB
Notification: Performance of remove unused functions: time 0.08294/14.06, allocations: 20.25 MB / 5.186 GB, free: 133.9 MB / 0.7918 GB
Notification: Model statistics after passing the back-end for simulation:
 * Number of independent subsystems: 45
 * Number of states: 180 (pCO2_2000.solution.temperature,pCO2_2000.O2_free.logn,pCO2_2000.H2O.logn,pCO2_2000.relaxed.OxyHm[1].logn,pCO2_2000.relaxed.OxyHm[2].logn,pCO2_2000.relaxed.OxyHm[3].logn,pCO2_2000.relaxed.OxyHm[4].logn,pCO2_2000.relaxed.DeoxyHm[1].logn,pCO2_2000.relaxed.DeoxyHm[2].logn,pCO2_2000.relaxed.DeoxyHm[3].logn,pCO2_2000.relaxed.DeoxyHm[4].logn,pCO2_2000.relaxed.HmAH[1].logn,pCO2_2000.relaxed.HmAH[2].logn,pCO2_2000.relaxed.HmAH[3].logn,pCO2_2000.relaxed.HmAH[4].logn,pCO2_2000.relaxed.HmA[1].logn,pCO2_2000.relaxed.HmA[2].logn,pCO2_2000.relaxed.HmA[3].logn,pCO2_2000.relaxed.HmA[4].logn,pCO2_2000.relaxed.HmNH3[1].logn,pCO2_2000.relaxed.HmNH3[2].logn,pCO2_2000.relaxed.HmNH3[3].logn,pCO2_2000.relaxed.HmNH3[4].logn,pCO2_2000.relaxed.HmNH2[1].logn,pCO2_2000.relaxed.HmNH2[2].logn,pCO2_2000.relaxed.HmNH2[3].logn,pCO2_2000.relaxed.HmNH2[4].logn,pCO2_2000.relaxed.HmNHCOO[1].logn,pCO2_2000.relaxed.HmNHCOO[2].logn,pCO2_2000.relaxed.HmNHCOO[3].logn,pCO2_2000.relaxed.HmNHCOO[4].logn,pCO2_2000.tensed.OxyHm[1].logn,pCO2_2000.tensed.OxyHm[2].logn,pCO2_2000.tensed.OxyHm[3].logn,pCO2_2000.tensed.OxyHm[4].logn,pCO2_2000.tensed.DeoxyHm[1].logn,pCO2_2000.tensed.DeoxyHm[2].logn,pCO2_2000.tensed.DeoxyHm[3].logn,pCO2_2000.tensed.DeoxyHm[4].logn,pCO2_2000.tensed.HmAH[1].logn,pCO2_2000.tensed.HmAH[2].logn,pCO2_2000.tensed.HmAH[3].logn,pCO2_2000.tensed.HmAH[4].logn,pCO2_2000.tensed.HmA[1].logn,pCO2_2000.tensed.HmA[2].logn,pCO2_2000.tensed.HmA[3].logn,pCO2_2000.tensed.HmA[4].logn,pCO2_2000.tensed.HmNH3[1].logn,pCO2_2000.tensed.HmNH3[2].logn,pCO2_2000.tensed.HmNH3[3].logn,pCO2_2000.tensed.HmNH3[4].logn,pCO2_2000.tensed.HmNH2[1].logn,pCO2_2000.tensed.HmNH2[2].logn,pCO2_2000.tensed.HmNH2[3].logn,pCO2_2000.tensed.HmNH2[4].logn,pCO2_2000.tensed.HmNHCOO[1].logn,pCO2_2000.tensed.HmNHCOO[2].logn,pCO2_2000.tensed.HmNHCOO[3].logn,pCO2_2000.tensed.HmNHCOO[4].logn,pCO2_2000.CO2_free.logn,pCO2_5330.solution.temperature,pCO2_5330.O2_free.logn,pCO2_5330.H2O.logn,pCO2_5330.relaxed.OxyHm[1].logn,pCO2_5330.relaxed.OxyHm[2].logn,pCO2_5330.relaxed.OxyHm[3].logn,pCO2_5330.relaxed.OxyHm[4].logn,pCO2_5330.relaxed.DeoxyHm[1].logn,pCO2_5330.relaxed.DeoxyHm[2].logn,pCO2_5330.relaxed.DeoxyHm[3].logn,pCO2_5330.relaxed.DeoxyHm[4].logn,pCO2_5330.relaxed.HmAH[1].logn,pCO2_5330.relaxed.HmAH[2].logn,pCO2_5330.relaxed.HmAH[3].logn,pCO2_5330.relaxed.HmAH[4].logn,pCO2_5330.relaxed.HmA[1].logn,pCO2_5330.relaxed.HmA[2].logn,pCO2_5330.relaxed.HmA[3].logn,pCO2_5330.relaxed.HmA[4].logn,pCO2_5330.relaxed.HmNH3[1].logn,pCO2_5330.relaxed.HmNH3[2].logn,pCO2_5330.relaxed.HmNH3[3].logn,pCO2_5330.relaxed.HmNH3[4].logn,pCO2_5330.relaxed.HmNH2[1].logn,pCO2_5330.relaxed.HmNH2[2].logn,pCO2_5330.relaxed.HmNH2[3].logn,pCO2_5330.relaxed.HmNH2[4].logn,pCO2_5330.relaxed.HmNHCOO[1].logn,pCO2_5330.relaxed.HmNHCOO[2].logn,pCO2_5330.relaxed.HmNHCOO[3].logn,pCO2_5330.relaxed.HmNHCOO[4].logn,pCO2_5330.tensed.OxyHm[1].logn,pCO2_5330.tensed.OxyHm[2].logn,pCO2_5330.tensed.OxyHm[3].logn,pCO2_5330.tensed.OxyHm[4].logn,pCO2_5330.tensed.DeoxyHm[1].logn,pCO2_5330.tensed.DeoxyHm[2].logn,pCO2_5330.tensed.DeoxyHm[3].logn,pCO2_5330.tensed.DeoxyHm[4].logn,pCO2_5330.tensed.HmAH[1].logn,pCO2_5330.tensed.HmAH[2].logn,pCO2_5330.tensed.HmAH[3].logn,pCO2_5330.tensed.HmAH[4].logn,pCO2_5330.tensed.HmA[1].logn,pCO2_5330.tensed.HmA[2].logn,pCO2_5330.tensed.HmA[3].logn,pCO2_5330.tensed.HmA[4].logn,pCO2_5330.tensed.HmNH3[1].logn,pCO2_5330.tensed.HmNH3[2].logn,pCO2_5330.tensed.HmNH3[3].logn,pCO2_5330.tensed.HmNH3[4].logn,pCO2_5330.tensed.HmNH2[1].logn,pCO2_5330.tensed.HmNH2[2].logn,pCO2_5330.tensed.HmNH2[3].logn,pCO2_5330.tensed.HmNH2[4].logn,pCO2_5330.tensed.HmNHCOO[1].logn,pCO2_5330.tensed.HmNHCOO[2].logn,pCO2_5330.tensed.HmNHCOO[3].logn,pCO2_5330.tensed.HmNHCOO[4].logn,pCO2_5330.CO2_free.logn,pCO2_9330.solution.temperature,pCO2_9330.O2_free.logn,pCO2_9330.H2O.logn,pCO2_9330.relaxed.OxyHm[1].logn,pCO2_9330.relaxed.OxyHm[2].logn,pCO2_9330.relaxed.OxyHm[3].logn,pCO2_9330.relaxed.OxyHm[4].logn,pCO2_9330.relaxed.DeoxyHm[1].logn,pCO2_9330.relaxed.DeoxyHm[2].logn,pCO2_9330.relaxed.DeoxyHm[3].logn,pCO2_9330.relaxed.DeoxyHm[4].logn,pCO2_9330.relaxed.HmAH[1].logn,pCO2_9330.relaxed.HmAH[2].logn,pCO2_9330.relaxed.HmAH[3].logn,pCO2_9330.relaxed.HmAH[4].logn,pCO2_9330.relaxed.HmA[1].logn,pCO2_9330.relaxed.HmA[2].logn,pCO2_9330.relaxed.HmA[3].logn,pCO2_9330.relaxed.HmA[4].logn,pCO2_9330.relaxed.HmNH3[1].logn,pCO2_9330.relaxed.HmNH3[2].logn,pCO2_9330.relaxed.HmNH3[3].logn,pCO2_9330.relaxed.HmNH3[4].logn,pCO2_9330.relaxed.HmNH2[1].logn,pCO2_9330.relaxed.HmNH2[2].logn,pCO2_9330.relaxed.HmNH2[3].logn,pCO2_9330.relaxed.HmNH2[4].logn,pCO2_9330.relaxed.HmNHCOO[1].logn,pCO2_9330.relaxed.HmNHCOO[2].logn,pCO2_9330.relaxed.HmNHCOO[3].logn,pCO2_9330.relaxed.HmNHCOO[4].logn,pCO2_9330.tensed.OxyHm[1].logn,pCO2_9330.tensed.OxyHm[2].logn,pCO2_9330.tensed.OxyHm[3].logn,pCO2_9330.tensed.OxyHm[4].logn,pCO2_9330.tensed.DeoxyHm[1].logn,pCO2_9330.tensed.DeoxyHm[2].logn,pCO2_9330.tensed.DeoxyHm[3].logn,pCO2_9330.tensed.DeoxyHm[4].logn,pCO2_9330.tensed.HmAH[1].logn,pCO2_9330.tensed.HmAH[2].logn,pCO2_9330.tensed.HmAH[3].logn,pCO2_9330.tensed.HmAH[4].logn,pCO2_9330.tensed.HmA[1].logn,pCO2_9330.tensed.HmA[2].logn,pCO2_9330.tensed.HmA[3].logn,pCO2_9330.tensed.HmA[4].logn,pCO2_9330.tensed.HmNH3[1].logn,pCO2_9330.tensed.HmNH3[2].logn,pCO2_9330.tensed.HmNH3[3].logn,pCO2_9330.tensed.HmNH3[4].logn,pCO2_9330.tensed.HmNH2[1].logn,pCO2_9330.tensed.HmNH2[2].logn,pCO2_9330.tensed.HmNH2[3].logn,pCO2_9330.tensed.HmNH2[4].logn,pCO2_9330.tensed.HmNHCOO[1].logn,pCO2_9330.tensed.HmNHCOO[2].logn,pCO2_9330.tensed.HmNHCOO[3].logn,pCO2_9330.tensed.HmNHCOO[4].logn,pCO2_9330.CO2_free.logn)
 * Number of discrete variables: 0 ()
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for simulation (3702):
 * Single equations (assignments): 3693
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 0
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 9
 * Mixed (continuous/discrete) equation systems: 0
Notification: Torn system details for strict tearing set:
 * Linear torn systems (#iteration vars, #inner vars, density): 6 systems
   {(1,3,100.0%), (33,10,82.4%), (1,3,100.0%), (33,10,82.4%), (1,3,100.0%), (33,10,82.4%)}
 * Non-linear torn systems (#iteration vars, #inner vars): 3 systems
   {(1,3), (1,3), (1,3)}
Notification: Performance of Backend phase and start with SimCode phase: time 0.5454/14.61, allocations: 212.3 MB / 5.394 GB, free: 58.87 MB / 0.7918 GB
Notification: Performance of simCode: created initialization part: time 0.4049/15.01, allocations: 85.28 MB / 5.477 GB, free: 213 MB / 0.7918 GB
Notification: Performance of simCode: created event and clocks part: time 1.094e-05/15.01, allocations: 0 / 5.477 GB, free: 213 MB / 0.7918 GB
Notification: Performance of simCode: created simulation system equations: time 0.08763/15.1, allocations: 54.51 MB / 5.53 GB, free: 205.9 MB / 0.7918 GB
Notification: Performance of simCode: created of all other equations (e.g. parameter, nominal, assert, etc): time 0.04698/15.15, allocations: 7.823 MB / 5.538 GB, free: 202.9 MB / 0.7918 GB
Notification: Performance of simCode: created linear, non-linear and system jacobian parts: time 2.611/17.76, allocations: 0.8502 GB / 6.388 GB, free: 72.73 MB / 0.7918 GB
Notification: Performance of simCode: some other stuff during SimCode phase: time 0.296/18.06, allocations: 30.57 MB / 6.418 GB, free: 189.6 MB / 0.7918 GB
Notification: Performance of simCode: alias equations: time 0.04169/18.1, allocations: 15.63 MB / 6.433 GB, free: 188.8 MB / 0.7918 GB
Notification: Performance of simCode: all other stuff during SimCode phase: time 0.04199/18.14, allocations: 22.83 MB / 6.455 GB, free: 188.8 MB / 0.7918 GB
Notification: Performance of SimCode: time 1.103e-06/18.14, allocations: 2.562 kB / 6.455 GB, free: 188.8 MB / 0.7918 GB
Notification: Performance of buildModelFMU: Generate the FMI files: time 2.712/20.85, allocations: 1.435 GB / 7.891 GB, free: 101 MB / 0.7918 GB
Notification: Performance of buildModelFMU: Generate platform static: time 136.6/157.5, allocations: 6.938 kB / 7.891 GB, free: 101 MB / 0.7918 GB
"
[Timeout remaining time 502]
(rm -f Chemical_Chemical.Obsolete.Examples.Hemoglobin.Joels57.pipe ; mkfifo Chemical_Chemical.Obsolete.Examples.Hemoglobin.Joels57.pipe ; head -c 1048576 < Chemical_Chemical.Obsolete.Examples.Hemoglobin.Joels57.pipe >> ../files/Chemical_Chemical.Obsolete.Examples.Hemoglobin.Joels57.sim & /home/hudson/saved_omc/OMSimulator/install/bin/OMSimulator  --tempDir=temp_Chemical_Chemical_Obsolete_Examples_Hemoglobin_Joels57_fmu --startTime=0 --stopTime=70 --stepSize=0.028 --timeout=50 --tolerance=1e-05 Chemical_Chemical_Obsolete_Examples_Hemoglobin_Joels57.fmu > Chemical_Chemical.Obsolete.Examples.Hemoglobin.Joels57.pipe 2>&1) [Timeout 52.5]
[Calling os._exit(0), Time elapsed: 163.57016215845942]
Failed to read output from testmodel.py, exit status != 0:
158.19882614538074 158.059609195 156.001051766
Calling exit ...
<OMPython.OMCSessionZMQ object at 0x793bd53c4620>