Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr Chemical_master_Chemical.Examples.SimpleReactionsWithJunction2.conf.json
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo): time 0.0007064/0.0007064, allocations: 80.44 kB / 19.17 MB, free: 0.7422 MB / 13.93 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo): time 0.0007083/0.0007083, allocations: 169.9 kB / 22.46 MB, free: 2.105 MB / 18.57 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo): time 0.8284/0.8284, allocations: 177.1 MB / 202.8 MB, free: 5.734 MB / 186.7 MB
"
[Timeout remaining time 179]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/package.mo): time 0.08046/0.08046, allocations: 17.45 MB / 276.6 MB, free: 11.75 MB / 266.7 MB
"
[Timeout remaining time 180]
Using package Chemical with version 2.0.1 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/package.mo)
Using package Modelica with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo)
Using package Complex with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo)
Using package ModelicaServices with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo)
Running command: "" <> buildModelFMU(Chemical.Examples.SimpleReactionsWithJunction2,fileNamePrefix="Chemical_master_Chemical_Examples_SimpleReactionsWithJunction2",fmuType="me",version="2.0",platforms={"static"})
"" <> buildModelFMU(Chemical.Examples.SimpleReactionsWithJunction2,fileNamePrefix="Chemical_master_Chemical_Examples_SimpleReactionsWithJunction2",fmuType="me",version="2.0",platforms={"static"}) [Timeout 660]
"Notification: Performance of FrontEnd - loaded program: time 1.774e-06/1.774e-06, allocations: 0.7031 kB / 411.6 MB, free: 12.45 MB / 330.7 MB
Notification: Performance of FrontEnd - Absyn->SCode: time 1.606e-05/1.783e-05, allocations: 4.141 kB / 411.6 MB, free: 12.45 MB / 330.7 MB
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Processes.mo:1084:7-1084:40:writable] Warning: An inner declaration for outer component dropOfCommons could not be found and was automatically generated.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Processes.mo:1084:7-1084:40:writable] Notification: The diagnostics message for the missing inner is: 
Your model is using an outer \"dropOfCommons\" component but
an inner \"dropOfCommons\" component is not defined.
Use Chemical.DropOfCommons in your model
to specify system properties.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1731:7-1731:66:writable] Warning: An inner declaration for outer component system could not be found and was automatically generated.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1731:7-1731:66:writable] Notification: The diagnostics message for the missing inner is: 
Your model is using an outer \"system\" component but
an inner \"system\" component is not defined.
For simulation drag Modelica.Fluid.System into your model
to specify system properties.
Notification: Performance of NFInst.instantiate(Chemical.Examples.SimpleReactionsWithJunction2): time 0.02717/0.02719, allocations: 35.34 MB / 446.9 MB, free: 5.555 MB / 346.7 MB
Notification: Performance of NFInst.instExpressions: time 0.01396/0.04116, allocations: 11.11 MB / 458 MB, free: 11.52 MB / 362.7 MB
Notification: Performance of NFInst.updateImplicitVariability: time 0.00195/0.04311, allocations: 103.2 kB / 458.1 MB, free: 11.42 MB / 362.7 MB
Notification: Performance of NFTyping.typeComponents: time 0.003414/0.04652, allocations: 2.198 MB / 460.3 MB, free: 9.207 MB / 362.7 MB
Notification: Performance of NFTyping.typeBindings: time 0.003727/0.05025, allocations: 2.005 MB / 462.3 MB, free: 7.188 MB / 362.7 MB
Notification: Performance of NFTyping.typeClassSections: time 0.005205/0.05545, allocations: 4.368 MB / 466.7 MB, free: 2.801 MB / 362.7 MB
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1332:3-1332:55:writable] Warning: Parameter r.nextProducts[1].data.MM has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1333:3-1333:87:writable] Warning: Parameter r.nextProducts[1].data.Hf has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1334:3-1334:81:writable] Warning: Parameter r.nextProducts[1].data.H0 has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1336:3-1336:82:writable] Warning: Parameter r.nextProducts[1].data.alow has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 7)) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1337:3-1337:79:writable] Warning: Parameter r.nextProducts[1].data.blow has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 3)) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1338:3-1338:84:writable] Warning: Parameter r.nextProducts[1].data.ahigh has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 7)) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1339:3-1339:81:writable] Warning: Parameter r.nextProducts[1].data.bhigh has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 3)) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1341:3-1342:83:writable] Warning: Parameter r.nextProducts[1].data.z has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1344:3-1344:89:writable] Warning: Parameter r.nextProducts[1].data.phase has no value, and is fixed during initialization (fixed=true), using available start value (start=Chemical.Interfaces.Phase.Gas) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1347:3-1347:140:writable] Warning: Parameter r.nextProducts[1].data.VmBase has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1348:3-1348:137:writable] Warning: Parameter r.nextProducts[1].data.VmExcess has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1332:3-1332:55:writable] Warning: Parameter r1.nextProducts[1].data.MM has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1333:3-1333:87:writable] Warning: Parameter r1.nextProducts[1].data.Hf has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1334:3-1334:81:writable] Warning: Parameter r1.nextProducts[1].data.H0 has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1336:3-1336:82:writable] Warning: Parameter r1.nextProducts[1].data.alow has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 7)) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1337:3-1337:79:writable] Warning: Parameter r1.nextProducts[1].data.blow has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 3)) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1338:3-1338:84:writable] Warning: Parameter r1.nextProducts[1].data.ahigh has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 7)) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1339:3-1339:81:writable] Warning: Parameter r1.nextProducts[1].data.bhigh has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 3)) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1341:3-1342:83:writable] Warning: Parameter r1.nextProducts[1].data.z has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1344:3-1344:89:writable] Warning: Parameter r1.nextProducts[1].data.phase has no value, and is fixed during initialization (fixed=true), using available start value (start=Chemical.Interfaces.Phase.Gas) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1347:3-1347:140:writable] Warning: Parameter r1.nextProducts[1].data.VmBase has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1348:3-1348:137:writable] Warning: Parameter r1.nextProducts[1].data.VmExcess has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value.
Notification: Performance of NFFlatten.flatten: time 0.004056/0.05951, allocations: 5.019 MB / 471.7 MB, free: 13.76 MB / 378.7 MB
Notification: Performance of NFFlatten.resolveConnections: time 0.00111/0.06062, allocations: 1.323 MB / 473 MB, free: 12.35 MB / 378.7 MB
Notification: Performance of NFEvalConstants.evaluate: time 0.00195/0.06257, allocations: 3.15 MB / 476.2 MB, free: 9.195 MB / 378.7 MB
Notification: Performance of NFSimplifyModel.simplify: time 0.001908/0.06448, allocations: 2.401 MB / 478.6 MB, free: 6.789 MB / 378.7 MB
Notification: Performance of NFPackage.collectConstants: time 0.0003855/0.06486, allocations: 0.5312 MB / 479.1 MB, free: 6.258 MB / 378.7 MB
Notification: Performance of NFFlatten.collectFunctions: time 0.002879/0.06774, allocations: 2.316 MB / 481.4 MB, free: 3.938 MB / 378.7 MB
Notification: Performance of NFScalarize.scalarize: time 0.0007783/0.06852, allocations: 1.706 MB / 483.1 MB, free: 2.227 MB / 378.7 MB
Notification: Performance of NFVerifyModel.verify: time 0.001114/0.06963, allocations: 1.785 MB / 484.9 MB, free: 448 kB / 378.7 MB
Notification: Performance of NFConvertDAE.convert: time 0.005815/0.07545, allocations: 8.993 MB / 493.9 MB, free: 7.418 MB / 394.7 MB
Notification: Performance of FrontEnd - DAE generated: time 4.428e-06/0.07545, allocations: 4 kB / 493.9 MB, free: 7.414 MB / 394.7 MB
Notification: Performance of FrontEnd: time 1.152e-06/0.07545, allocations: 0 / 493.9 MB, free: 7.414 MB / 394.7 MB
Notification: Performance of Transformations before backend: time 4.31e-05/0.0755, allocations: 0 / 493.9 MB, free: 7.414 MB / 394.7 MB
Notification: Model statistics after passing the front-end and creating the data structures used by the back-end:
 * Number of equations: 1431
 * Number of variables: 1431
Notification: Performance of Generate backend data structure: time 0.00586/0.08136, allocations: 6.122 MB / 0.4883 GB, free: 1.223 MB / 394.7 MB
Notification: Performance of prepare preOptimizeDAE: time 3.323e-05/0.08139, allocations: 11.97 kB / 0.4883 GB, free: 1.211 MB / 394.7 MB
Notification: Performance of preOpt introduceOutputAliases (simulation): time 0.0005239/0.08191, allocations: 0.7099 MB / 0.489 GB, free: 0.4922 MB / 394.7 MB
Notification: Performance of preOpt normalInlineFunction (simulation): time 0.001957/0.08387, allocations: 1.32 MB / 0.4903 GB, free: 15.17 MB / 410.7 MB
Notification: Performance of preOpt evaluateParameters (simulation): time 0.002358/0.08623, allocations: 2.642 MB / 0.4929 GB, free: 12.45 MB / 410.7 MB
Notification: Performance of preOpt simplifyIfEquations (simulation): time 0.0003389/0.08657, allocations: 0.7282 MB / 0.4936 GB, free: 11.64 MB / 410.7 MB
Notification: Performance of preOpt expandDerOperator (simulation): time 0.000389/0.08696, allocations: 460.3 kB / 0.494 GB, free: 11.19 MB / 410.7 MB
Notification: Performance of preOpt clockPartitioning (simulation): time 0.0104/0.09735, allocations: 14.53 MB / 0.5082 GB, free: 12.61 MB / 426.7 MB
Notification: Performance of preOpt findStateOrder (simulation): time 5.009e-05/0.0974, allocations: 4.125 kB / 0.5082 GB, free: 12.6 MB / 426.7 MB
Notification: Performance of preOpt replaceEdgeChange (simulation): time 0.0002415/0.09764, allocations: 187.9 kB / 0.5084 GB, free: 12.42 MB / 426.7 MB
Notification: Performance of preOpt inlineArrayEqn (simulation): time 0.0003247/0.09797, allocations: 0.5488 MB / 0.509 GB, free: 11.87 MB / 426.7 MB
Notification: Performance of preOpt removeEqualRHS (simulation): time 0.0162/0.1142, allocations: 23.24 MB / 0.5316 GB, free: 4.613 MB / 442.7 MB
Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.02705/0.1412, allocations: 30.89 MB / 0.5618 GB, free: 5.574 MB / 474.7 MB
Notification: Performance of preOpt comSubExp (simulation): time 0.004454/0.1457, allocations: 4.568 MB / 0.5663 GB, free: 1 MB / 474.7 MB
Notification: Performance of preOpt resolveLoops (simulation): time 0.003341/0.149, allocations: 3.928 MB / 0.5701 GB, free: 13.07 MB / 490.7 MB
Notification: Performance of preOpt evalFunc (simulation): time 0.1647/0.3137, allocations: 20.07 MB / 0.5897 GB, free: 146.8 MB / 490.7 MB
Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 2.724e-05/0.3138, allocations: 58.77 kB / 0.5898 GB, free: 146.8 MB / 490.7 MB
Notification: Performance of pre-optimization done (n=289): time 3.216e-06/0.3138, allocations: 0 / 0.5898 GB, free: 146.8 MB / 490.7 MB
Error: Internal error IndexReduction.pantelidesIndexReduction failed! System is structurally singular and cannot be handled because the number of unassigned equations is larger than the number of states. Use -d=bltdump to get more information.
Error: Internal error Transformation Module PFPlusExt index Reduction Method Pantelides failed!
"
[Timeout remaining time 660]
[Calling sys.exit(0), Time elapsed: 1.980227330699563]
Failed to read output from testmodel.py, exit status != 0:
0.47297941241413355 0.34395741999999996 0.267358356
Calling exit ...
<OMPython.OMCSessionZMQ object at 0x7a3a25ce22d0>