Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr Pharmacolibrary_Pharmacolibrary.Examples.PK_Caffeine.PK_population_Caffeine.conf.json
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo): time 0.001184/0.001184, allocations: 84.53 kB / 19.93 MB, free: 4.609 MB / 18.57 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo): time 0.001305/0.001305, allocations: 174.3 kB / 23.21 MB, free: 1.328 MB / 18.57 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo): time 0.9509/0.9509, allocations: 177.1 MB / 203.5 MB, free: 5.746 MB / 186.7 MB
"
[Timeout remaining time 179]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/package.mo", uses=false) [Timeout 180]
"[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/Examples/package.order:0:0-0:0:readonly] Warning: The package.order file does not list all .mo files and directories (containing package.mo) present in its directory.
Missing names are:
	Paracetamol_Experiment
Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/package.mo): time 1.612/1.612, allocations: 273.5 MB / 0.5209 GB, free: 14.96 MB / 458.7 MB
"
[Timeout remaining time 178]
Using package Pharmacolibrary with version 25.09 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/package.mo)
Using package Modelica with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo)
Using package Complex with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo)
Using package ModelicaServices with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo)
Running command: translateModel(Pharmacolibrary.Examples.PK_Caffeine.PK_population_Caffeine,tolerance=1e-06,outputFormat="empty",numberOfIntervals=499,variableFilter="",fileNamePrefix="Pharmacolibrary_Pharmacolibrary.Examples.PK_Caffeine.PK_population_Caffeine")
translateModel(Pharmacolibrary.Examples.PK_Caffeine.PK_population_Caffeine,tolerance=1e-06,outputFormat="empty",numberOfIntervals=499,variableFilter="",fileNamePrefix="Pharmacolibrary_Pharmacolibrary.Examples.PK_Caffeine.PK_population_Caffeine") [Timeout 660]
"Notification: Performance of FrontEnd - loaded program: time 1.674e-06/1.674e-06, allocations: 0 / 0.7558 GB, free: 10.67 MB / 0.5887 GB
Notification: Performance of FrontEnd - Absyn->SCode: time 2.383e-05/2.55e-05, allocations: 2.281 kB / 0.7558 GB, free: 10.66 MB / 0.5887 GB
Notification: Performance of NFInst.instantiate(Pharmacolibrary.Examples.PK_Caffeine.PK_population_Caffeine): time 0.005281/0.005307, allocations: 6.243 MB / 0.7619 GB, free: 4.461 MB / 0.5887 GB
Notification: Performance of NFInst.instExpressions: time 0.00163/0.006937, allocations: 1.298 MB / 0.7632 GB, free: 3.164 MB / 0.5887 GB
Notification: Performance of NFInst.updateImplicitVariability: time 0.0002414/0.007178, allocations: 8 kB / 0.7632 GB, free: 3.156 MB / 0.5887 GB
Notification: Performance of NFTyping.typeComponents: time 0.0002407/0.007419, allocations: 110.8 kB / 0.7633 GB, free: 3.047 MB / 0.5887 GB
Notification: Performance of NFTyping.typeBindings: time 0.0004852/0.007904, allocations: 349 kB / 0.7636 GB, free: 2.703 MB / 0.5887 GB
Notification: Performance of NFTyping.typeClassSections: time 0.0005561/0.00846, allocations: 283.6 kB / 0.7639 GB, free: 2.426 MB / 0.5887 GB
Notification: Performance of NFFlatten.flatten: time 0.0009021/0.009362, allocations: 1.225 MB / 0.7651 GB, free: 1.195 MB / 0.5887 GB
Notification: Performance of NFFlatten.resolveConnections: time 0.0003171/0.009679, allocations: 171.9 kB / 0.7652 GB, free: 1.012 MB / 0.5887 GB
Notification: Performance of NFEvalConstants.evaluate: time 0.0005588/0.01024, allocations: 0.6238 MB / 0.7658 GB, free: 396 kB / 0.5887 GB
Notification: Performance of NFSimplifyModel.simplify: time 0.0008446/0.01108, allocations: 351 kB / 0.7662 GB, free: 44 kB / 0.5887 GB
Notification: Performance of NFPackage.collectConstants: time 0.0001208/0.0112, allocations: 108 kB / 0.7663 GB, free: 15.93 MB / 0.6043 GB
Notification: Performance of NFFlatten.collectFunctions: time 0.0001124/0.01132, allocations: 112 kB / 0.7664 GB, free: 15.82 MB / 0.6043 GB
Notification: Performance of NFScalarize.scalarize: time 0.0001109/0.01143, allocations: 203.2 kB / 0.7666 GB, free: 15.63 MB / 0.6043 GB
Notification: Performance of NFVerifyModel.verify: time 0.0002761/0.0117, allocations: 359.2 kB / 0.7669 GB, free: 15.28 MB / 0.6043 GB
Notification: Performance of NFConvertDAE.convert: time 0.0008098/0.01251, allocations: 1.188 MB / 0.7681 GB, free: 14.09 MB / 0.6043 GB
Notification: Performance of FrontEnd - DAE generated: time 4.979e-06/0.01252, allocations: 0 / 0.7681 GB, free: 14.09 MB / 0.6043 GB
Notification: Performance of FrontEnd: time 1.232e-06/0.01252, allocations: 0 / 0.7681 GB, free: 14.09 MB / 0.6043 GB
Notification: Performance of Transformations before backend: time 1.213e-05/0.01253, allocations: 0 / 0.7681 GB, free: 14.09 MB / 0.6043 GB
Notification: Model statistics after passing the front-end and creating the data structures used by the back-end:
 * Number of equations: 146
 * Number of variables: 146
Notification: Performance of Generate backend data structure: time 0.001573/0.0141, allocations: 1.329 MB / 0.7694 GB, free: 12.67 MB / 0.6043 GB
Notification: Performance of prepare preOptimizeDAE: time 5.114e-05/0.01416, allocations: 12.03 kB / 0.7694 GB, free: 12.66 MB / 0.6043 GB
Notification: Performance of preOpt normalInlineFunction (simulation): time 0.0001304/0.01429, allocations: 95.42 kB / 0.7695 GB, free: 12.57 MB / 0.6043 GB
Notification: Performance of preOpt evaluateParameters (simulation): time 0.0005007/0.01479, allocations: 452.8 kB / 0.7699 GB, free: 12.09 MB / 0.6043 GB
Notification: Performance of preOpt simplifyIfEquations (simulation): time 3.722e-05/0.01482, allocations: 45.31 kB / 0.77 GB, free: 12.05 MB / 0.6043 GB
Notification: Performance of preOpt expandDerOperator (simulation): time 8.816e-05/0.01491, allocations: 71.95 kB / 0.77 GB, free: 11.98 MB / 0.6043 GB
Notification: Performance of preOpt clockPartitioning (simulation): time 0.0009695/0.01588, allocations: 0.8687 MB / 0.7709 GB, free: 11.04 MB / 0.6043 GB
Notification: Performance of preOpt findStateOrder (simulation): time 3.17e-05/0.01591, allocations: 7.953 kB / 0.7709 GB, free: 11.03 MB / 0.6043 GB
Notification: Performance of preOpt replaceEdgeChange (simulation): time 4.094e-05/0.01595, allocations: 24 kB / 0.7709 GB, free: 11.01 MB / 0.6043 GB
Notification: Performance of preOpt inlineArrayEqn (simulation): time 1.576e-05/0.01597, allocations: 23.94 kB / 0.7709 GB, free: 10.98 MB / 0.6043 GB
Notification: Performance of preOpt removeEqualRHS (simulation): time 0.0008776/0.01685, allocations: 0.7504 MB / 0.7717 GB, free: 10.2 MB / 0.6043 GB
Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.002076/0.01892, allocations: 1.917 MB / 0.7735 GB, free: 8.227 MB / 0.6043 GB
Notification: Performance of preOpt comSubExp (simulation): time 0.001102/0.02003, allocations: 0.8468 MB / 0.7744 GB, free: 7.297 MB / 0.6043 GB
Notification: Performance of preOpt resolveLoops (simulation): time 0.0004704/0.0205, allocations: 491.1 kB / 0.7748 GB, free: 6.766 MB / 0.6043 GB
Notification: Performance of preOpt evalFunc (simulation): time 4.213e-05/0.02054, allocations: 8 kB / 0.7748 GB, free: 6.758 MB / 0.6043 GB
Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 0.000918/0.02146, allocations: 1.134 MB / 0.7759 GB, free: 5.492 MB / 0.6043 GB
Notification: Performance of pre-optimization done (n=101): time 2.405e-06/0.02146, allocations: 4 kB / 0.7759 GB, free: 5.488 MB / 0.6043 GB
Notification: Performance of matching and sorting (n=107): time 0.003956/0.02541, allocations: 3.731 MB / 0.7796 GB, free: 1.488 MB / 0.6043 GB
Notification: Performance of inlineWhenForInitialization (initialization): time 0.0004724/0.02589, allocations: 0.6492 MB / 0.7802 GB, free: 0.6914 MB / 0.6043 GB
Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.00047/0.02636, allocations: 0.5301 MB / 0.7807 GB, free: 152 kB / 0.6043 GB
Notification: Performance of collectPreVariables (initialization): time 5.978e-05/0.02642, allocations: 61.69 kB / 0.7808 GB, free: 84 kB / 0.6043 GB
Notification: Performance of collectInitialEqns (initialization): time 0.0001932/0.02661, allocations: 289.6 kB / 0.7811 GB, free: 15.79 MB / 0.6199 GB
Notification: Performance of collectInitialBindings (initialization): time 0.0002033/0.02681, allocations: 365 kB / 0.7814 GB, free: 15.43 MB / 0.6199 GB
Notification: Performance of simplifyInitialFunctions (initialization): time 0.0001969/0.02701, allocations: 186.6 kB / 0.7816 GB, free: 15.25 MB / 0.6199 GB
Notification: Performance of setup shared object (initialization): time 0.0001575/0.02717, allocations: 394.7 kB / 0.782 GB, free: 14.85 MB / 0.6199 GB
Notification: Performance of preBalanceInitialSystem (initialization): time 0.0006307/0.0278, allocations: 0.6409 MB / 0.7826 GB, free: 14.16 MB / 0.6199 GB
Notification: Performance of partitionIndependentBlocks (initialization): time 0.0007729/0.02857, allocations: 0.9729 MB / 0.7836 GB, free: 12.98 MB / 0.6199 GB
Notification: Performance of analyzeInitialSystem (initialization): time 0.002539/0.03111, allocations: 2.527 MB / 0.786 GB, free: 10.13 MB / 0.6199 GB
Notification: Performance of solveInitialSystemEqSystem (initialization): time 7.534e-06/0.03112, allocations: 4 kB / 0.786 GB, free: 10.13 MB / 0.6199 GB
Notification: Performance of matching and sorting (n=161) (initialization): time 0.001992/0.03311, allocations: 1.744 MB / 0.7877 GB, free: 8.266 MB / 0.6199 GB
Notification: Performance of prepare postOptimizeDAE: time 0.0001415/0.03325, allocations: 263.3 kB / 0.788 GB, free: 7.953 MB / 0.6199 GB
Notification: Performance of postOpt simplifyComplexFunction (initialization): time 1.588e-05/0.03327, allocations: 12.67 kB / 0.788 GB, free: 7.941 MB / 0.6199 GB
Notification: Performance of postOpt tearingSystem (initialization): time 3.135e-05/0.0333, allocations: 20 kB / 0.788 GB, free: 7.922 MB / 0.6199 GB
Notification: Performance of postOpt solveSimpleEquations (initialization): time 0.0004864/0.03379, allocations: 243.5 kB / 0.7882 GB, free: 7.684 MB / 0.6199 GB
Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 1.969e-05/0.0338, allocations: 19.92 kB / 0.7883 GB, free: 7.664 MB / 0.6199 GB
Notification: Performance of postOpt simplifyAllExpressions (initialization): time 0.0003564/0.03416, allocations: 67.95 kB / 0.7883 GB, free: 7.598 MB / 0.6199 GB
Notification: Performance of postOpt collapseArrayExpressions (initialization): time 6.495e-05/0.03423, allocations: 63.53 kB / 0.7884 GB, free: 7.539 MB / 0.6199 GB
Warning: Assuming fixed start value for the following 30 variables:
         green_tee_drinker.central.AUC:VARIABLE(unit = \"kg.s/m3\" fixed = true )  \"area under curve\" type: Real
         green_tee_drinker.periodicDose.TotalCumulativeMass:VARIABLE(min = -1e-12 unit = \"kg\" fixed = true )  \"Total dose adminitrated by this source\" type: Real
         green_tee_drinker.periodicDose.absorptionLumen.AUC:VARIABLE(unit = \"kg.s/m3\" fixed = true )  \"area under curve\" type: Real
         green_tee_drinker.periodicDose.variableDose.TotalCumulativeMass:VARIABLE(min = -1e-12 unit = \"kg\" fixed = true )  \"Total dose adminitrated by this source\" type: Real
         black_tea_drinker.central.AUC:VARIABLE(unit = \"kg.s/m3\" fixed = true )  \"area under curve\" type: Real
         black_tea_drinker.periodicDose.TotalCumulativeMass:VARIABLE(min = -1e-12 unit = \"kg\" fixed = true )  \"Total dose adminitrated by this source\" type: Real
         black_tea_drinker.periodicDose.absorptionLumen.AUC:VARIABLE(unit = \"kg.s/m3\" fixed = true )  \"area under curve\" type: Real
         black_tea_drinker.periodicDose.variableDose.TotalCumulativeMass:VARIABLE(min = -1e-12 unit = \"kg\" fixed = true )  \"Total dose adminitrated by this source\" type: Real
         coffee_drinker.central.AUC:VARIABLE(unit = \"kg.s/m3\" fixed = true )  \"area under curve\" type: Real
         coffee_drinker.periodicDose.TotalCumulativeMass:VARIABLE(min = -1e-12 unit = \"kg\" fixed = true )  \"Total dose adminitrated by this source\" type: Real
         coffee_drinker.periodicDose.absorptionLumen.AUC:VARIABLE(unit = \"kg.s/m3\" fixed = true )  \"area under curve\" type: Real
         coffee_drinker.periodicDose.variableDose.TotalCumulativeMass:VARIABLE(min = -1e-12 unit = \"kg\" fixed = true )  \"Total dose adminitrated by this source\" type: Real
         coffee_drinker.central.Cmin:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true )  type: Real
         coffee_drinker.central.Cmax:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true )  type: Real
         coffee_drinker.periodicDose.absorptionLumen.Cmin:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true )  type: Real
         coffee_drinker.periodicDose.absorptionLumen.Cmax:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true )  type: Real
         black_tea_drinker.central.Cmin:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true )  type: Real
         black_tea_drinker.central.Cmax:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true )  type: Real
         black_tea_drinker.periodicDose.absorptionLumen.Cmin:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true )  type: Real
         black_tea_drinker.periodicDose.absorptionLumen.Cmax:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true )  type: Real
         green_tee_drinker.central.Cmin:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true )  type: Real
         green_tee_drinker.central.Cmax:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true )  type: Real
         green_tee_drinker.periodicDose.absorptionLumen.Cmin:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true )  type: Real
         green_tee_drinker.periodicDose.absorptionLumen.Cmax:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true )  type: Real
         coffee_drinker.periodicDose.absorptionLumen.rising:DISCRETE(fixed = true protected = true )  type: Boolean
         coffee_drinker.central.rising:DISCRETE(fixed = true protected = true )  type: Boolean
         black_tea_drinker.periodicDose.absorptionLumen.rising:DISCRETE(fixed = true protected = true )  type: Boolean
         black_tea_drinker.central.rising:DISCRETE(fixed = true protected = true )  type: Boolean
         green_tee_drinker.periodicDose.absorptionLumen.rising:DISCRETE(fixed = true protected = true )  type: Boolean
         green_tee_drinker.central.rising:DISCRETE(fixed = true protected = true )  type: Boolean
Notification: Model statistics after passing the back-end for initialization:
 * Number of independent subsystems: 38
 * Number of states: 0 ()
 * Number of discrete variables: 63 ($PRE.coffee_drinker.central.Cmin,coffee_drinker.central.Cmin,$PRE.coffee_drinker.central.Cmax,coffee_drinker.central.Cmax,$PRE.coffee_drinker.periodicDose.absorptionLumen.Cmin,coffee_drinker.periodicDose.absorptionLumen.Cmin,$PRE.coffee_drinker.periodicDose.absorptionLumen.Cmax,coffee_drinker.periodicDose.absorptionLumen.Cmax,$PRE.black_tea_drinker.central.Cmin,black_tea_drinker.central.Cmin,$PRE.black_tea_drinker.central.Cmax,black_tea_drinker.central.Cmax,$PRE.black_tea_drinker.periodicDose.absorptionLumen.Cmin,black_tea_drinker.periodicDose.absorptionLumen.Cmin,$PRE.black_tea_drinker.periodicDose.absorptionLumen.Cmax,black_tea_drinker.periodicDose.absorptionLumen.Cmax,$PRE.green_tee_drinker.central.Cmin,green_tee_drinker.central.Cmin,$PRE.green_tee_drinker.central.Cmax,green_tee_drinker.central.Cmax,$PRE.green_tee_drinker.periodicDose.absorptionLumen.Cmin,green_tee_drinker.periodicDose.absorptionLumen.Cmin,$PRE.green_tee_drinker.periodicDose.absorptionLumen.Cmax,green_tee_drinker.periodicDose.absorptionLumen.Cmax,$PRE.coffee_drinker.periodicDose.pulse.count,$PRE.coffee_drinker.periodicDose.pulse.T_start,$PRE.coffee_drinker.periodicDose.absorptionLumen.rising,$PRE.coffee_drinker.central.rising,coffee_drinker.periodicDose.pulse.count,coffee_drinker.periodicDose.pulse.T_start,coffee_drinker.periodicDose.absorptionLumen.rising,coffee_drinker.central.rising,$whenCondition15,$whenCondition14,$whenCondition13,$whenCondition12,$whenCondition11,$PRE.black_tea_drinker.periodicDose.pulse.count,$PRE.black_tea_drinker.periodicDose.pulse.T_start,$PRE.black_tea_drinker.periodicDose.absorptionLumen.rising,$PRE.black_tea_drinker.central.rising,black_tea_drinker.periodicDose.pulse.count,black_tea_drinker.periodicDose.pulse.T_start,black_tea_drinker.periodicDose.absorptionLumen.rising,black_tea_drinker.central.rising,$whenCondition10,$whenCondition9,$whenCondition8,$whenCondition7,$whenCondition6,$PRE.green_tee_drinker.periodicDose.pulse.count,$PRE.green_tee_drinker.periodicDose.pulse.T_start,$PRE.green_tee_drinker.periodicDose.absorptionLumen.rising,$PRE.green_tee_drinker.central.rising,green_tee_drinker.periodicDose.pulse.count,green_tee_drinker.periodicDose.pulse.T_start,green_tee_drinker.periodicDose.absorptionLumen.rising,green_tee_drinker.central.rising,$whenCondition5,$whenCondition4,$whenCondition3,$whenCondition2,$whenCondition1)
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for initialization (152):
 * Single equations (assignments): 143
 * Array equations: 0
 * Algorithm blocks: 9
 * Record equations: 0
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 0
 * Mixed (continuous/discrete) equation systems: 0
Notification: Performance of prepare postOptimizeDAE: time 0.0006198/0.03485, allocations: 0.5779 MB / 0.7889 GB, free: 6.922 MB / 0.6199 GB
Notification: Performance of postOpt lateInlineFunction (simulation): time 9.715e-05/0.03494, allocations: 91.48 kB / 0.789 GB, free: 6.832 MB / 0.6199 GB
Notification: Performance of postOpt wrapFunctionCalls (simulation): time 0.0001152/0.03506, allocations: 81.28 kB / 0.7891 GB, free: 6.746 MB / 0.6199 GB
Notification: Performance of postOpt inlineArrayEqn (simulation): time 7.565e-06/0.03507, allocations: 12 kB / 0.7891 GB, free: 6.734 MB / 0.6199 GB
Notification: Performance of postOpt constantLinearSystem (simulation): time 2.168e-05/0.03509, allocations: 0 / 0.7891 GB, free: 6.734 MB / 0.6199 GB
Notification: Performance of postOpt simplifysemiLinear (simulation): time 1.053e-05/0.0351, allocations: 7.984 kB / 0.7891 GB, free: 6.727 MB / 0.6199 GB
Notification: Performance of postOpt removeSimpleEquations (simulation): time 0.002238/0.03734, allocations: 2.334 MB / 0.7914 GB, free: 4.277 MB / 0.6199 GB
Notification: Performance of postOpt simplifyComplexFunction (simulation): time 3.206e-06/0.03734, allocations: 0 / 0.7914 GB, free: 4.277 MB / 0.6199 GB
Notification: Performance of postOpt solveSimpleEquations (simulation): time 0.0004298/0.03777, allocations: 171.8 kB / 0.7916 GB, free: 4.109 MB / 0.6199 GB
Notification: Performance of postOpt tearingSystem (simulation): time 4.449e-06/0.03777, allocations: 7.562 kB / 0.7916 GB, free: 4.105 MB / 0.6199 GB
Notification: Performance of postOpt inputDerivativesUsed (simulation): time 5.097e-05/0.03782, allocations: 39.97 kB / 0.7916 GB, free: 4.066 MB / 0.6199 GB
Notification: Performance of postOpt calculateStrongComponentJacobians (simulation): time 3.306e-06/0.03783, allocations: 4 kB / 0.7916 GB, free: 4.062 MB / 0.6199 GB
Notification: Performance of postOpt calculateStateSetsJacobians (simulation): time 3.256e-06/0.03783, allocations: 7.938 kB / 0.7916 GB, free: 4.055 MB / 0.6199 GB
Notification: Performance of postOpt symbolicJacobian (simulation): time 0.002059/0.03989, allocations: 2.264 MB / 0.7938 GB, free: 1.66 MB / 0.6199 GB
Notification: Performance of postOpt removeConstants (simulation): time 0.0002318/0.04012, allocations: 171.4 kB / 0.794 GB, free: 1.492 MB / 0.6199 GB
Notification: Performance of postOpt simplifyTimeIndepFuncCalls (simulation): time 9.451e-05/0.04022, allocations: 52.11 kB / 0.7941 GB, free: 1.441 MB / 0.6199 GB
Notification: Performance of postOpt simplifyAllExpressions (simulation): time 0.0002709/0.04049, allocations: 59.89 kB / 0.7941 GB, free: 1.383 MB / 0.6199 GB
Notification: Performance of postOpt findZeroCrossings (simulation): time 0.0001336/0.04062, allocations: 95.86 kB / 0.7942 GB, free: 1.289 MB / 0.6199 GB
Notification: Performance of postOpt collapseArrayExpressions (simulation): time 3.868e-05/0.04066, allocations: 39.97 kB / 0.7942 GB, free: 1.25 MB / 0.6199 GB
Notification: Performance of sorting global known variables: time 0.0002932/0.04095, allocations: 366.9 kB / 0.7946 GB, free: 0.8906 MB / 0.6199 GB
Notification: Performance of sort global known variables: time 6e-08/0.04095, allocations: 0 / 0.7946 GB, free: 0.8906 MB / 0.6199 GB
Notification: Performance of remove unused functions: time 0.0004909/0.04144, allocations: 248 kB / 0.7948 GB, free: 0.6484 MB / 0.6199 GB
Notification: Model statistics after passing the back-end for simulation:
 * Number of independent subsystems: 5
 * Number of states: 21 (green_tee_drinker.central.C,green_tee_drinker.central.AUC,green_tee_drinker.elim.MExc,green_tee_drinker.periodicDose.TotalCumulativeMass,green_tee_drinker.periodicDose.absorptionLumen.C,green_tee_drinker.periodicDose.absorptionLumen.AUC,green_tee_drinker.periodicDose.variableDose.TotalCumulativeMass,black_tea_drinker.central.C,black_tea_drinker.central.AUC,black_tea_drinker.elim.MExc,black_tea_drinker.periodicDose.TotalCumulativeMass,black_tea_drinker.periodicDose.absorptionLumen.C,black_tea_drinker.periodicDose.absorptionLumen.AUC,black_tea_drinker.periodicDose.variableDose.TotalCumulativeMass,coffee_drinker.central.C,coffee_drinker.central.AUC,coffee_drinker.elim.MExc,coffee_drinker.periodicDose.TotalCumulativeMass,coffee_drinker.periodicDose.absorptionLumen.C,coffee_drinker.periodicDose.absorptionLumen.AUC,coffee_drinker.periodicDose.variableDose.TotalCumulativeMass)
 * Number of discrete variables: 39 ($whenCondition1,$whenCondition2,$whenCondition3,$whenCondition4,$whenCondition5,green_tee_drinker.central.Cmax,green_tee_drinker.central.Cmin,green_tee_drinker.central.rising,green_tee_drinker.periodicDose.absorptionLumen.Cmax,green_tee_drinker.periodicDose.absorptionLumen.Cmin,green_tee_drinker.periodicDose.absorptionLumen.rising,green_tee_drinker.periodicDose.pulse.T_start,green_tee_drinker.periodicDose.pulse.count,$whenCondition6,$whenCondition7,$whenCondition8,$whenCondition9,$whenCondition10,black_tea_drinker.central.Cmax,black_tea_drinker.central.Cmin,black_tea_drinker.central.rising,black_tea_drinker.periodicDose.absorptionLumen.Cmax,black_tea_drinker.periodicDose.absorptionLumen.Cmin,black_tea_drinker.periodicDose.absorptionLumen.rising,black_tea_drinker.periodicDose.pulse.T_start,black_tea_drinker.periodicDose.pulse.count,$whenCondition11,$whenCondition12,$whenCondition13,$whenCondition14,$whenCondition15,coffee_drinker.central.Cmax,coffee_drinker.central.Cmin,coffee_drinker.central.rising,coffee_drinker.periodicDose.absorptionLumen.Cmax,coffee_drinker.periodicDose.absorptionLumen.Cmin,coffee_drinker.periodicDose.absorptionLumen.rising,coffee_drinker.periodicDose.pulse.T_start,coffee_drinker.periodicDose.pulse.count)
 * Number of discrete states: 33 (coffee_drinker.periodicDose.pulse.count,coffee_drinker.central.Cmin,$whenCondition15,coffee_drinker.central.Cmax,$whenCondition14,coffee_drinker.central.rising,coffee_drinker.periodicDose.absorptionLumen.Cmin,$whenCondition13,coffee_drinker.periodicDose.absorptionLumen.Cmax,$whenCondition12,coffee_drinker.periodicDose.absorptionLumen.rising,black_tea_drinker.periodicDose.pulse.count,black_tea_drinker.central.Cmin,$whenCondition10,black_tea_drinker.central.Cmax,$whenCondition9,black_tea_drinker.central.rising,black_tea_drinker.periodicDose.absorptionLumen.Cmin,$whenCondition8,black_tea_drinker.periodicDose.absorptionLumen.Cmax,$whenCondition7,black_tea_drinker.periodicDose.absorptionLumen.rising,green_tee_drinker.periodicDose.pulse.count,green_tee_drinker.central.Cmin,$whenCondition5,green_tee_drinker.central.Cmax,$whenCondition4,green_tee_drinker.central.rising,green_tee_drinker.periodicDose.absorptionLumen.Cmin,$whenCondition3,green_tee_drinker.periodicDose.absorptionLumen.Cmax,$whenCondition2,green_tee_drinker.periodicDose.absorptionLumen.rising)
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for simulation (89):
 * Single equations (assignments): 77
 * Array equations: 0
 * Algorithm blocks: 6
 * Record equations: 0
 * When equations: 6
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 0
 * Mixed (continuous/discrete) equation systems: 0
Notification: Performance of Backend phase and start with SimCode phase: time 0.000161/0.0416, allocations: 190.3 kB / 0.795 GB, free: 472 kB / 0.6199 GB
Notification: Performance of simCode: created initialization part: time 0.001439/0.04304, allocations: 1.836 MB / 0.7968 GB, free: 14.42 MB / 0.6355 GB
Notification: Performance of simCode: created event and clocks part: time 4.318e-06/0.04305, allocations: 8 kB / 0.7968 GB, free: 14.41 MB / 0.6355 GB
Notification: Performance of simCode: created simulation system equations: time 0.0007145/0.04376, allocations: 0.9746 MB / 0.7978 GB, free: 13.33 MB / 0.6355 GB
Notification: Performance of simCode: created of all other equations (e.g. parameter, nominal, assert, etc): time 0.0007702/0.04453, allocations: 273.8 kB / 0.798 GB, free: 13.08 MB / 0.6355 GB
Notification: Performance of simCode: created linear, non-linear and system jacobian parts: time 0.00242/0.04695, allocations: 2.382 MB / 0.8004 GB, free: 10.66 MB / 0.6355 GB
Notification: Performance of simCode: some other stuff during SimCode phase: time 0.0002338/0.04719, allocations: 369.8 kB / 0.8007 GB, free: 10.27 MB / 0.6355 GB
Notification: Performance of simCode: all other stuff during SimCode phase: time 0.0001459/0.04733, allocations: 72.5 kB / 0.8008 GB, free: 10.2 MB / 0.6355 GB
Notification: Performance of SimCode: time 4.41e-07/0.04733, allocations: 0 / 0.8008 GB, free: 10.2 MB / 0.6355 GB
Notification: Performance of Templates: time 0.01004/0.05737, allocations: 12.48 MB / 0.813 GB, free: 14.12 MB / 0.6512 GB
"
[Timeout remaining time 660]
make -j1 -f Pharmacolibrary_Pharmacolibrary.Examples.PK_Caffeine.PK_population_Caffeine.makefile [Timeout 660]
(rm -f Pharmacolibrary_Pharmacolibrary.Examples.PK_Caffeine.PK_population_Caffeine.pipe ; mkfifo Pharmacolibrary_Pharmacolibrary.Examples.PK_Caffeine.PK_population_Caffeine.pipe ; head -c 1048576 < Pharmacolibrary_Pharmacolibrary.Examples.PK_Caffeine.PK_population_Caffeine.pipe >> ../files/Pharmacolibrary_Pharmacolibrary.Examples.PK_Caffeine.PK_population_Caffeine.sim & ./Pharmacolibrary_Pharmacolibrary.Examples.PK_Caffeine.PK_population_Caffeine > Pharmacolibrary_Pharmacolibrary.Examples.PK_Caffeine.PK_population_Caffeine.pipe 2>&1) [Timeout 240]
[Calling sys.exit(0), Time elapsed: 7.574780036928132]