Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr Chemical_master_Chemical.Obsolete.Examples.Hemoglobin.Joels57.conf.json
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo): time 0.0007788/0.0007788, allocations: 76.55 kB / 19.93 MB, free: 4.617 MB / 18.57 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo): time 0.0007807/0.0007807, allocations: 177.9 kB / 23.22 MB, free: 1.332 MB / 18.57 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo): time 0.8688/0.8688, allocations: 177.1 MB / 203.5 MB, free: 5.723 MB / 186.7 MB
"
[Timeout remaining time 179]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/package.mo): time 0.08585/0.08585, allocations: 17.45 MB / 277.4 MB, free: 11.75 MB / 266.7 MB
"
[Timeout remaining time 180]
Using package Chemical with version 2.0.1 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/package.mo)
Using package Modelica with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo)
Using package Complex with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo)
Using package ModelicaServices with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo)
Running command: translateModel(Chemical.Obsolete.Examples.Hemoglobin.Joels57,tolerance=1e-05,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Chemical_master_Chemical.Obsolete.Examples.Hemoglobin.Joels57")
translateModel(Chemical.Obsolete.Examples.Hemoglobin.Joels57,tolerance=1e-05,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Chemical_master_Chemical.Obsolete.Examples.Hemoglobin.Joels57") [Timeout 660]
"Notification: Performance of FrontEnd - loaded program: time 1.323e-06/1.323e-06, allocations: 0 / 412.9 MB, free: 15.73 MB / 394.7 MB
Notification: Performance of FrontEnd - Absyn->SCode: time 2.467e-05/2.599e-05, allocations: 10.16 kB / 412.9 MB, free: 15.71 MB / 394.7 MB
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Obsolete.mo:14335:7-14335:66:writable] Warning: An inner declaration for outer component system could not be found and was automatically generated.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Obsolete.mo:14335:7-14335:66:writable] Notification: The diagnostics message for the missing inner is: 
Your model is using an outer \"system\" component but
an inner \"system\" component is not defined.
For simulation drag Modelica.Fluid.System into your model
to specify system properties.
Notification: Performance of NFInst.instantiate(Chemical.Obsolete.Examples.Hemoglobin.Joels57): time 0.2148/0.2148, allocations: 74.34 MB / 487.2 MB, free: 34.75 MB / 410.7 MB
Notification: Performance of NFInst.instExpressions: time 0.3598/0.5746, allocations: 191.2 MB / 0.6625 GB, free: 4.461 MB / 0.5105 GB
Notification: Performance of NFInst.updateImplicitVariability: time 0.01012/0.5848, allocations: 232.4 kB / 0.6628 GB, free: 4.461 MB / 0.5105 GB
Notification: Performance of NFTyping.typeComponents: time 0.01124/0.596, allocations: 4.512 MB / 0.6672 GB, free: 4.461 MB / 0.5105 GB
Notification: Performance of NFTyping.typeBindings: time 0.0414/0.6374, allocations: 18.51 MB / 0.6852 GB, free: 0.6602 MB / 0.5105 GB
Notification: Performance of NFTyping.typeClassSections: time 0.06576/0.7032, allocations: 33.5 MB / 0.718 GB, free: 7 MB / 0.5261 GB
Notification: Performance of NFFlatten.flatten: time 0.07295/0.7761, allocations: 91.39 MB / 0.8072 GB, free: 5.598 MB / 0.5886 GB
Notification: Performance of NFFlatten.resolveConnections: time 0.07514/0.8512, allocations: 52.24 MB / 0.8582 GB, free: 4.305 MB / 0.6355 GB
Notification: Performance of NFEvalConstants.evaluate: time 0.6232/1.474, allocations: 75.66 MB / 0.9321 GB, free: 38.68 MB / 0.6512 GB
Notification: Performance of NFSimplifyModel.simplify: time 0.08278/1.557, allocations: 50.96 MB / 0.9819 GB, free: 36.5 MB / 0.6512 GB
Notification: Performance of NFPackage.collectConstants: time 0.03591/1.593, allocations: 12.21 MB / 0.9938 GB, free: 24.3 MB / 0.6512 GB
Notification: Performance of NFFlatten.collectFunctions: time 0.0867/1.68, allocations: 34.98 MB / 1.028 GB, free: 0 / 0.6512 GB
Notification: Performance of NFScalarize.scalarize: time 0.05219/1.732, allocations: 25.55 MB / 1.053 GB, free: 2.211 MB / 0.6668 GB
Notification: Performance of NFVerifyModel.verify: time 0.06261/1.795, allocations: 31.11 MB / 1.083 GB, free: 6.566 MB / 0.698 GB
Notification: Performance of NFConvertDAE.convert: time 0.6712/2.466, allocations: 168.9 MB / 1.248 GB, free: 107.6 MB / 0.745 GB
Notification: Performance of FrontEnd - DAE generated: time 6.673e-06/2.466, allocations: 1.031 kB / 1.248 GB, free: 107.6 MB / 0.745 GB
Notification: Performance of FrontEnd: time 1.974e-06/2.466, allocations: 0 / 1.248 GB, free: 107.6 MB / 0.745 GB
Notification: Performance of Transformations before backend: time 0.003721/2.47, allocations: 0 / 1.248 GB, free: 107.6 MB / 0.745 GB
Notification: Model statistics after passing the front-end and creating the data structures used by the back-end:
 * Number of equations: 11424
 * Number of variables: 11424
Notification: Performance of Generate backend data structure: time 0.2264/2.696, allocations: 71.17 MB / 1.318 GB, free: 75.65 MB / 0.745 GB
Notification: Performance of prepare preOptimizeDAE: time 4.245e-05/2.696, allocations: 7.75 kB / 1.318 GB, free: 75.65 MB / 0.745 GB
Notification: Performance of preOpt normalInlineFunction (simulation): time 0.06513/2.761, allocations: 11.94 MB / 1.329 GB, free: 70.51 MB / 0.745 GB
Notification: Performance of preOpt evaluateParameters (simulation): time 0.1018/2.863, allocations: 42.62 MB / 1.371 GB, free: 36.8 MB / 0.745 GB
Notification: Performance of preOpt simplifyIfEquations (simulation): time 0.006333/2.869, allocations: 9.234 MB / 1.38 GB, free: 26.23 MB / 0.745 GB
Notification: Performance of preOpt expandDerOperator (simulation): time 0.03704/2.906, allocations: 4.598 MB / 1.384 GB, free: 21.63 MB / 0.745 GB
Notification: Performance of preOpt clockPartitioning (simulation): time 0.6504/3.557, allocations: 112.9 MB / 1.495 GB, free: 95.14 MB / 0.745 GB
Notification: Performance of preOpt findStateOrder (simulation): time 0.002105/3.559, allocations: 32.47 kB / 1.495 GB, free: 95.14 MB / 0.745 GB
Notification: Performance of preOpt replaceEdgeChange (simulation): time 0.03258/3.591, allocations: 1.764 MB / 1.497 GB, free: 93.75 MB / 0.745 GB
Notification: Performance of preOpt inlineArrayEqn (simulation): time 0.0007515/3.592, allocations: 1.057 MB / 1.498 GB, free: 93.75 MB / 0.745 GB
Notification: Performance of preOpt removeEqualRHS (simulation): time 0.2519/3.844, allocations: 153 MB / 1.647 GB, free: 7.16 MB / 0.8075 GB
Warning: The model contains alias variables with redundant start and/or conflicting nominal values. It is recommended to resolve the conflicts, because otherwise the system could be hard to solve. To print the conflicting alias sets and the chosen candidates please use -d=aliasConflicts.
Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.9822/4.826, allocations: 389.1 MB / 2.027 GB, free: 104.1 MB / 0.87 GB
Notification: Performance of preOpt comSubExp (simulation): time 1.719/6.546, allocations: 0.6474 GB / 2.674 GB, free: 277.5 MB / 0.87 GB
Notification: Performance of preOpt resolveLoops (simulation): time 0.0837/6.629, allocations: 60.06 MB / 2.733 GB, free: 239.2 MB / 0.87 GB
Notification: Performance of preOpt evalFunc (simulation): time 0.75/7.379, allocations: 254.7 MB / 2.982 GB, free: 282.8 MB / 0.87 GB
Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 0.0005168/7.38, allocations: 336.5 kB / 2.982 GB, free: 282.7 MB / 0.87 GB
Notification: Performance of preOpt simplifyInStream (simulation): time 0.06784/7.448, allocations: 29.13 MB / 3.011 GB, free: 282.7 MB / 0.87 GB
Notification: Performance of pre-optimization done (n=2985): time 0.0001827/7.448, allocations: 0 / 3.011 GB, free: 282.7 MB / 0.87 GB
Notification: Performance of matching and sorting (n=3387): time 1.493/8.94, allocations: 423.7 MB / 3.424 GB, free: 277.4 MB / 0.87 GB
Notification: Performance of inlineWhenForInitialization (initialization): time 0.0002231/8.941, allocations: 449.9 kB / 3.425 GB, free: 277.2 MB / 0.87 GB
Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.03321/8.974, allocations: 30.72 MB / 3.455 GB, free: 267 MB / 0.87 GB
Notification: Performance of collectPreVariables (initialization): time 0.01137/8.985, allocations: 0.5666 MB / 3.455 GB, free: 266.5 MB / 0.87 GB
Notification: Performance of collectInitialEqns (initialization): time 0.007677/8.993, allocations: 21.54 MB / 3.476 GB, free: 253.5 MB / 0.87 GB
Notification: Performance of collectInitialBindings (initialization): time 0.01532/9.008, allocations: 12.26 MB / 3.488 GB, free: 243.8 MB / 0.87 GB
Notification: Performance of simplifyInitialFunctions (initialization): time 0.01524/9.023, allocations: 9.866 MB / 3.498 GB, free: 238.4 MB / 0.87 GB
Notification: Performance of setup shared object (initialization): time 2.547e-05/9.024, allocations: 306.3 kB / 3.498 GB, free: 238.1 MB / 0.87 GB
Notification: Performance of preBalanceInitialSystem (initialization): time 0.03677/9.06, allocations: 39.04 MB / 3.536 GB, free: 215.8 MB / 0.87 GB
Notification: Performance of partitionIndependentBlocks (initialization): time 0.04478/9.105, allocations: 53.24 MB / 3.588 GB, free: 167.4 MB / 0.87 GB
Notification: Performance of analyzeInitialSystem (initialization): time 0.0858/9.191, allocations: 96.37 MB / 3.683 GB, free: 64.62 MB / 0.87 GB
Notification: Performance of solveInitialSystemEqSystem (initialization): time 0.0003305/9.191, allocations: 128 kB / 3.683 GB, free: 64.49 MB / 0.87 GB
Notification: Performance of matching and sorting (n=5667) (initialization): time 0.9775/10.17, allocations: 257.1 MB / 3.934 GB, free: 180 MB / 0.87 GB
Notification: Performance of prepare postOptimizeDAE: time 0.0002412/10.17, allocations: 204 kB / 3.934 GB, free: 179.8 MB / 0.87 GB
Notification: Performance of postOpt simplifyComplexFunction (initialization): time 0.0005315/10.17, allocations: 444 kB / 3.934 GB, free: 179.3 MB / 0.87 GB
Notification: Performance of postOpt tearingSystem (initialization): time 0.09713/10.27, allocations: 73.71 MB / 4.006 GB, free: 105.9 MB / 0.87 GB
Notification: Performance of postOpt solveSimpleEquations (initialization): time 0.03147/10.3, allocations: 11.18 MB / 4.017 GB, free: 95.11 MB / 0.87 GB
Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 0.6053/10.9, allocations: 309.6 MB / 4.32 GB, free: 151.8 MB / 0.87 GB
Notification: Performance of postOpt simplifyAllExpressions (initialization): time 0.03715/10.94, allocations: 2.479 MB / 4.322 GB, free: 149.4 MB / 0.87 GB
Notification: Performance of postOpt collapseArrayExpressions (initialization): time 0.01213/10.95, allocations: 2.801 MB / 4.325 GB, free: 146.6 MB / 0.87 GB
Notification: Model statistics after passing the back-end for initialization:
 * Number of independent subsystems: 2031
 * Number of states: 0 ()
 * Number of discrete variables: 0 ()
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for initialization (5523):
 * Single equations (assignments): 5514
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 0
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 9
 * Mixed (continuous/discrete) equation systems: 0
Notification: Torn system details for strict tearing set:
 * Linear torn systems (#iteration vars, #inner vars, density): 6 systems
   {(1,3,100.0%), (33,10,82.4%), (1,3,100.0%), (33,10,82.4%), (1,3,100.0%), (33,10,82.4%)}
 * Non-linear torn systems (#iteration vars, #inner vars): 3 systems
   {(1,3), (1,3), (1,3)}
Notification: Performance of prepare postOptimizeDAE: time 0.03748/10.99, allocations: 18.34 MB / 4.343 GB, free: 129.1 MB / 0.87 GB
Notification: Performance of postOpt lateInlineFunction (simulation): time 0.009401/11, allocations: 3.167 MB / 4.346 GB, free: 127.7 MB / 0.87 GB
Notification: Performance of postOpt wrapFunctionCalls (simulation): time 0.7057/11.71, allocations: 152.3 MB / 4.494 GB, free: 216 MB / 0.87 GB
Notification: Performance of postOpt inlineArrayEqn (simulation): time 0.0003018/11.71, allocations: 361 kB / 4.495 GB, free: 216 MB / 0.87 GB
Notification: Performance of postOpt constantLinearSystem (simulation): time 0.000334/11.71, allocations: 57.12 kB / 4.495 GB, free: 216 MB / 0.87 GB
Notification: Performance of postOpt simplifysemiLinear (simulation): time 0.0009152/11.71, allocations: 184.2 kB / 4.495 GB, free: 216 MB / 0.87 GB
Notification: Performance of postOpt removeSimpleEquations (simulation): time 0.5022/12.21, allocations: 223.3 MB / 4.713 GB, free: 128.8 MB / 0.87 GB
Notification: Performance of postOpt simplifyComplexFunction (simulation): time 0.0003142/12.21, allocations: 12 kB / 4.713 GB, free: 128.8 MB / 0.87 GB
Notification: Performance of postOpt solveSimpleEquations (simulation): time 0.02544/12.23, allocations: 7.248 MB / 4.72 GB, free: 121.6 MB / 0.87 GB
Notification: Performance of postOpt tearingSystem (simulation): time 0.05207/12.29, allocations: 39.74 MB / 4.759 GB, free: 82.12 MB / 0.87 GB
Notification: Performance of postOpt inputDerivativesUsed (simulation): time 0.01061/12.3, allocations: 1.448 MB / 4.76 GB, free: 80.68 MB / 0.87 GB
Notification: Performance of postOpt calculateStrongComponentJacobians (simulation): time 0.4926/12.79, allocations: 155.6 MB / 4.912 GB, free: 217.2 MB / 0.87 GB
Notification: Performance of postOpt calculateStateSetsJacobians (simulation): time 6.251e-06/12.79, allocations: 18.69 kB / 4.912 GB, free: 217.2 MB / 0.87 GB
Notification: Performance of postOpt symbolicJacobian (simulation): time 0.4578/13.25, allocations: 200.2 MB / 5.108 GB, free: 96.91 MB / 0.87 GB
Notification: Performance of postOpt removeConstants (simulation): time 0.02416/13.27, allocations: 11.33 MB / 5.119 GB, free: 87.45 MB / 0.87 GB
Notification: Performance of postOpt simplifyTimeIndepFuncCalls (simulation): time 0.008617/13.28, allocations: 0.9164 MB / 5.12 GB, free: 86.54 MB / 0.87 GB
Notification: Performance of postOpt simplifyAllExpressions (simulation): time 0.01899/13.3, allocations: 1.55 MB / 5.121 GB, free: 84.99 MB / 0.87 GB
Notification: Performance of postOpt findZeroCrossings (simulation): time 0.01079/13.31, allocations: 4.68 MB / 5.126 GB, free: 80.29 MB / 0.87 GB
Notification: Performance of postOpt collapseArrayExpressions (simulation): time 0.003194/13.31, allocations: 1.382 MB / 5.127 GB, free: 78.91 MB / 0.87 GB
Notification: Performance of sorting global known variables: time 0.02036/13.33, allocations: 20.8 MB / 5.148 GB, free: 58.25 MB / 0.87 GB
Notification: Performance of sort global known variables: time 1.8e-07/13.33, allocations: 0 / 5.148 GB, free: 58.25 MB / 0.87 GB
Notification: Performance of remove unused functions: time 0.05614/13.39, allocations: 20.21 MB / 5.167 GB, free: 38.5 MB / 0.87 GB
Notification: Model statistics after passing the back-end for simulation:
 * Number of independent subsystems: 45
 * Number of states: 180 (pCO2_2000.solution.temperature,pCO2_2000.O2_free.logn,pCO2_2000.H2O.logn,pCO2_2000.relaxed.OxyHm[1].logn,pCO2_2000.relaxed.OxyHm[2].logn,pCO2_2000.relaxed.OxyHm[3].logn,pCO2_2000.relaxed.OxyHm[4].logn,pCO2_2000.relaxed.DeoxyHm[1].logn,pCO2_2000.relaxed.DeoxyHm[2].logn,pCO2_2000.relaxed.DeoxyHm[3].logn,pCO2_2000.relaxed.DeoxyHm[4].logn,pCO2_2000.relaxed.HmAH[1].logn,pCO2_2000.relaxed.HmAH[2].logn,pCO2_2000.relaxed.HmAH[3].logn,pCO2_2000.relaxed.HmAH[4].logn,pCO2_2000.relaxed.HmA[1].logn,pCO2_2000.relaxed.HmA[2].logn,pCO2_2000.relaxed.HmA[3].logn,pCO2_2000.relaxed.HmA[4].logn,pCO2_2000.relaxed.HmNH3[1].logn,pCO2_2000.relaxed.HmNH3[2].logn,pCO2_2000.relaxed.HmNH3[3].logn,pCO2_2000.relaxed.HmNH3[4].logn,pCO2_2000.relaxed.HmNH2[1].logn,pCO2_2000.relaxed.HmNH2[2].logn,pCO2_2000.relaxed.HmNH2[3].logn,pCO2_2000.relaxed.HmNH2[4].logn,pCO2_2000.relaxed.HmNHCOO[1].logn,pCO2_2000.relaxed.HmNHCOO[2].logn,pCO2_2000.relaxed.HmNHCOO[3].logn,pCO2_2000.relaxed.HmNHCOO[4].logn,pCO2_2000.tensed.OxyHm[1].logn,pCO2_2000.tensed.OxyHm[2].logn,pCO2_2000.tensed.OxyHm[3].logn,pCO2_2000.tensed.OxyHm[4].logn,pCO2_2000.tensed.DeoxyHm[1].logn,pCO2_2000.tensed.DeoxyHm[2].logn,pCO2_2000.tensed.DeoxyHm[3].logn,pCO2_2000.tensed.DeoxyHm[4].logn,pCO2_2000.tensed.HmAH[1].logn,pCO2_2000.tensed.HmAH[2].logn,pCO2_2000.tensed.HmAH[3].logn,pCO2_2000.tensed.HmAH[4].logn,pCO2_2000.tensed.HmA[1].logn,pCO2_2000.tensed.HmA[2].logn,pCO2_2000.tensed.HmA[3].logn,pCO2_2000.tensed.HmA[4].logn,pCO2_2000.tensed.HmNH3[1].logn,pCO2_2000.tensed.HmNH3[2].logn,pCO2_2000.tensed.HmNH3[3].logn,pCO2_2000.tensed.HmNH3[4].logn,pCO2_2000.tensed.HmNH2[1].logn,pCO2_2000.tensed.HmNH2[2].logn,pCO2_2000.tensed.HmNH2[3].logn,pCO2_2000.tensed.HmNH2[4].logn,pCO2_2000.tensed.HmNHCOO[1].logn,pCO2_2000.tensed.HmNHCOO[2].logn,pCO2_2000.tensed.HmNHCOO[3].logn,pCO2_2000.tensed.HmNHCOO[4].logn,pCO2_2000.CO2_free.logn,pCO2_5330.solution.temperature,pCO2_5330.O2_free.logn,pCO2_5330.H2O.logn,pCO2_5330.relaxed.OxyHm[1].logn,pCO2_5330.relaxed.OxyHm[2].logn,pCO2_5330.relaxed.OxyHm[3].logn,pCO2_5330.relaxed.OxyHm[4].logn,pCO2_5330.relaxed.DeoxyHm[1].logn,pCO2_5330.relaxed.DeoxyHm[2].logn,pCO2_5330.relaxed.DeoxyHm[3].logn,pCO2_5330.relaxed.DeoxyHm[4].logn,pCO2_5330.relaxed.HmAH[1].logn,pCO2_5330.relaxed.HmAH[2].logn,pCO2_5330.relaxed.HmAH[3].logn,pCO2_5330.relaxed.HmAH[4].logn,pCO2_5330.relaxed.HmA[1].logn,pCO2_5330.relaxed.HmA[2].logn,pCO2_5330.relaxed.HmA[3].logn,pCO2_5330.relaxed.HmA[4].logn,pCO2_5330.relaxed.HmNH3[1].logn,pCO2_5330.relaxed.HmNH3[2].logn,pCO2_5330.relaxed.HmNH3[3].logn,pCO2_5330.relaxed.HmNH3[4].logn,pCO2_5330.relaxed.HmNH2[1].logn,pCO2_5330.relaxed.HmNH2[2].logn,pCO2_5330.relaxed.HmNH2[3].logn,pCO2_5330.relaxed.HmNH2[4].logn,pCO2_5330.relaxed.HmNHCOO[1].logn,pCO2_5330.relaxed.HmNHCOO[2].logn,pCO2_5330.relaxed.HmNHCOO[3].logn,pCO2_5330.relaxed.HmNHCOO[4].logn,pCO2_5330.tensed.OxyHm[1].logn,pCO2_5330.tensed.OxyHm[2].logn,pCO2_5330.tensed.OxyHm[3].logn,pCO2_5330.tensed.OxyHm[4].logn,pCO2_5330.tensed.DeoxyHm[1].logn,pCO2_5330.tensed.DeoxyHm[2].logn,pCO2_5330.tensed.DeoxyHm[3].logn,pCO2_5330.tensed.DeoxyHm[4].logn,pCO2_5330.tensed.HmAH[1].logn,pCO2_5330.tensed.HmAH[2].logn,pCO2_5330.tensed.HmAH[3].logn,pCO2_5330.tensed.HmAH[4].logn,pCO2_5330.tensed.HmA[1].logn,pCO2_5330.tensed.HmA[2].logn,pCO2_5330.tensed.HmA[3].logn,pCO2_5330.tensed.HmA[4].logn,pCO2_5330.tensed.HmNH3[1].logn,pCO2_5330.tensed.HmNH3[2].logn,pCO2_5330.tensed.HmNH3[3].logn,pCO2_5330.tensed.HmNH3[4].logn,pCO2_5330.tensed.HmNH2[1].logn,pCO2_5330.tensed.HmNH2[2].logn,pCO2_5330.tensed.HmNH2[3].logn,pCO2_5330.tensed.HmNH2[4].logn,pCO2_5330.tensed.HmNHCOO[1].logn,pCO2_5330.tensed.HmNHCOO[2].logn,pCO2_5330.tensed.HmNHCOO[3].logn,pCO2_5330.tensed.HmNHCOO[4].logn,pCO2_5330.CO2_free.logn,pCO2_9330.solution.temperature,pCO2_9330.O2_free.logn,pCO2_9330.H2O.logn,pCO2_9330.relaxed.OxyHm[1].logn,pCO2_9330.relaxed.OxyHm[2].logn,pCO2_9330.relaxed.OxyHm[3].logn,pCO2_9330.relaxed.OxyHm[4].logn,pCO2_9330.relaxed.DeoxyHm[1].logn,pCO2_9330.relaxed.DeoxyHm[2].logn,pCO2_9330.relaxed.DeoxyHm[3].logn,pCO2_9330.relaxed.DeoxyHm[4].logn,pCO2_9330.relaxed.HmAH[1].logn,pCO2_9330.relaxed.HmAH[2].logn,pCO2_9330.relaxed.HmAH[3].logn,pCO2_9330.relaxed.HmAH[4].logn,pCO2_9330.relaxed.HmA[1].logn,pCO2_9330.relaxed.HmA[2].logn,pCO2_9330.relaxed.HmA[3].logn,pCO2_9330.relaxed.HmA[4].logn,pCO2_9330.relaxed.HmNH3[1].logn,pCO2_9330.relaxed.HmNH3[2].logn,pCO2_9330.relaxed.HmNH3[3].logn,pCO2_9330.relaxed.HmNH3[4].logn,pCO2_9330.relaxed.HmNH2[1].logn,pCO2_9330.relaxed.HmNH2[2].logn,pCO2_9330.relaxed.HmNH2[3].logn,pCO2_9330.relaxed.HmNH2[4].logn,pCO2_9330.relaxed.HmNHCOO[1].logn,pCO2_9330.relaxed.HmNHCOO[2].logn,pCO2_9330.relaxed.HmNHCOO[3].logn,pCO2_9330.relaxed.HmNHCOO[4].logn,pCO2_9330.tensed.OxyHm[1].logn,pCO2_9330.tensed.OxyHm[2].logn,pCO2_9330.tensed.OxyHm[3].logn,pCO2_9330.tensed.OxyHm[4].logn,pCO2_9330.tensed.DeoxyHm[1].logn,pCO2_9330.tensed.DeoxyHm[2].logn,pCO2_9330.tensed.DeoxyHm[3].logn,pCO2_9330.tensed.DeoxyHm[4].logn,pCO2_9330.tensed.HmAH[1].logn,pCO2_9330.tensed.HmAH[2].logn,pCO2_9330.tensed.HmAH[3].logn,pCO2_9330.tensed.HmAH[4].logn,pCO2_9330.tensed.HmA[1].logn,pCO2_9330.tensed.HmA[2].logn,pCO2_9330.tensed.HmA[3].logn,pCO2_9330.tensed.HmA[4].logn,pCO2_9330.tensed.HmNH3[1].logn,pCO2_9330.tensed.HmNH3[2].logn,pCO2_9330.tensed.HmNH3[3].logn,pCO2_9330.tensed.HmNH3[4].logn,pCO2_9330.tensed.HmNH2[1].logn,pCO2_9330.tensed.HmNH2[2].logn,pCO2_9330.tensed.HmNH2[3].logn,pCO2_9330.tensed.HmNH2[4].logn,pCO2_9330.tensed.HmNHCOO[1].logn,pCO2_9330.tensed.HmNHCOO[2].logn,pCO2_9330.tensed.HmNHCOO[3].logn,pCO2_9330.tensed.HmNHCOO[4].logn,pCO2_9330.CO2_free.logn)
 * Number of discrete variables: 0 ()
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for simulation (3702):
 * Single equations (assignments): 3693
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 0
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 9
 * Mixed (continuous/discrete) equation systems: 0
Notification: Torn system details for strict tearing set:
 * Linear torn systems (#iteration vars, #inner vars, density): 6 systems
   {(1,3,100.0%), (33,10,82.4%), (1,3,100.0%), (33,10,82.4%), (1,3,100.0%), (33,10,82.4%)}
 * Non-linear torn systems (#iteration vars, #inner vars): 3 systems
   {(1,3), (1,3), (1,3)}
Notification: Performance of Backend phase and start with SimCode phase: time 0.01843/13.41, allocations: 11.22 MB / 5.178 GB, free: 28.56 MB / 0.87 GB
Notification: Performance of simCode: created initialization part: time 0.3488/13.76, allocations: 85.25 MB / 5.262 GB, free: 299.3 MB / 0.87 GB
Notification: Performance of simCode: created event and clocks part: time 1.036e-05/13.76, allocations: 3.812 kB / 5.262 GB, free: 299.3 MB / 0.87 GB
Notification: Performance of simCode: created simulation system equations: time 0.07791/13.84, allocations: 54.47 MB / 5.315 GB, free: 280.5 MB / 0.87 GB
Notification: Performance of simCode: created of all other equations (e.g. parameter, nominal, assert, etc): time 0.03848/13.87, allocations: 7.698 MB / 5.322 GB, free: 277.5 MB / 0.87 GB
Notification: Performance of simCode: created linear, non-linear and system jacobian parts: time 0.1703/14.04, allocations: 120.7 MB / 5.44 GB, free: 193.2 MB / 0.87 GB
Notification: Performance of simCode: some other stuff during SimCode phase: time 0.02856/14.07, allocations: 29.65 MB / 5.469 GB, free: 171.4 MB / 0.87 GB
Notification: Performance of simCode: all other stuff during SimCode phase: time 0.01831/14.09, allocations: 4.613 MB / 5.474 GB, free: 167.5 MB / 0.87 GB
Notification: Performance of SimCode: time 1.533e-06/14.09, allocations: 4 kB / 5.474 GB, free: 167.5 MB / 0.87 GB
Notification: Performance of Templates: time 5.335/19.43, allocations: 3.315 GB / 8.788 GB, free: 117.3 MB / 0.87 GB
"
[Timeout remaining time 641]
make -j1 -f Chemical_master_Chemical.Obsolete.Examples.Hemoglobin.Joels57.makefile [Timeout 660]
(rm -f Chemical_master_Chemical.Obsolete.Examples.Hemoglobin.Joels57.pipe ; mkfifo Chemical_master_Chemical.Obsolete.Examples.Hemoglobin.Joels57.pipe ; head -c 1048576 < Chemical_master_Chemical.Obsolete.Examples.Hemoglobin.Joels57.pipe >> ../files/Chemical_master_Chemical.Obsolete.Examples.Hemoglobin.Joels57.sim & ./Chemical_master_Chemical.Obsolete.Examples.Hemoglobin.Joels57  -abortSlowSimulation -alarm=480 -lv LOG_STATS > Chemical_master_Chemical.Obsolete.Examples.Hemoglobin.Joels57.pipe 2>&1) [Timeout 480]
[Calling sys.exit(0), Time elapsed: 77.10628049634397]
Failed to read output from testmodel.py, exit status != 0:
19.43306182511151 19.439852545 16.97227061
Calling exit ...
<OMPython.OMCSessionZMQ object at 0x76ce847c43e0>