Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr Chemical_master_Chemical.Examples.debug.EnzymeKinetics2_.conf.json loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo): time 0.0008886/0.0008886, allocations: 76.55 kB / 19.93 MB, free: 4.637 MB / 18.57 MB " [Timeout remaining time 180] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo): time 0.0008506/0.0008506, allocations: 177.9 kB / 23.22 MB, free: 1.352 MB / 18.57 MB " [Timeout remaining time 180] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo): time 0.8411/0.8411, allocations: 177.1 MB / 203.5 MB, free: 5.738 MB / 186.7 MB " [Timeout remaining time 179] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/package.mo): time 0.07863/0.07863, allocations: 17.45 MB / 277.4 MB, free: 11.76 MB / 266.7 MB " [Timeout remaining time 180] Using package Chemical with version 2.0.1 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/package.mo) Using package Modelica with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo) Using package Complex with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo) Using package ModelicaServices with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo) Running command: translateModel(Chemical.Examples.debug.EnzymeKinetics2_,tolerance=1e-06,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Chemical_master_Chemical.Examples.debug.EnzymeKinetics2_") translateModel(Chemical.Examples.debug.EnzymeKinetics2_,tolerance=1e-06,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Chemical_master_Chemical.Examples.debug.EnzymeKinetics2_") [Timeout 660] "Notification: Performance of FrontEnd - loaded program: time 1.533e-06/1.533e-06, allocations: 0 / 412.9 MB, free: 15.76 MB / 394.7 MB Notification: Performance of FrontEnd - Absyn->SCode: time 2.244e-05/2.398e-05, allocations: 2.281 kB / 412.9 MB, free: 15.75 MB / 394.7 MB [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Boundaries.mo:1343:7-1343:66:writable] Warning: An inner declaration for outer component system could not be found and was automatically generated. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Boundaries.mo:1343:7-1343:66:writable] Notification: The diagnostics message for the missing inner is: Your model is using an outer \"system\" component but an inner \"system\" component is not defined. For simulation drag Modelica.Fluid.System into your model to specify system properties. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Boundaries.mo:1361:7-1361:76:writable] Warning: An inner declaration for outer component dropOfCommons could not be found and was automatically generated. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Boundaries.mo:1361:7-1361:76:writable] Notification: The diagnostics message for the missing inner is: Your model is using an outer \"dropOfCommons\" component but an inner \"dropOfCommons\" component is not defined. Use Chemical.DropOfCommons in your model to specify system properties. Notification: Performance of NFInst.instantiate(Chemical.Examples.debug.EnzymeKinetics2_): time 0.2912/0.2912, allocations: 31.95 MB / 444.8 MB, free: 44.21 MB / 410.8 MB Notification: Performance of NFInst.instExpressions: time 0.01002/0.3013, allocations: 10.12 MB / 454.9 MB, free: 41.79 MB / 410.8 MB Notification: Performance of NFInst.updateImplicitVariability: time 0.001926/0.3032, allocations: 83.81 kB / 455 MB, free: 41.75 MB / 410.8 MB Notification: Performance of NFTyping.typeComponents: time 0.003292/0.3065, allocations: 1.937 MB / 457 MB, free: 40.78 MB / 410.8 MB Notification: Performance of NFTyping.typeBindings: time 0.002936/0.3094, allocations: 1.543 MB / 458.5 MB, free: 39.79 MB / 410.8 MB Notification: Performance of NFTyping.typeClassSections: time 0.004575/0.314, allocations: 4.084 MB / 462.6 MB, free: 37.34 MB / 410.8 MB [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1332:3-1332:55:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.MM has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1333:3-1333:87:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.Hf has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1334:3-1334:81:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.H0 has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1336:3-1336:82:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.alow has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 7)) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1337:3-1337:79:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.blow has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 3)) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1338:3-1338:84:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.ahigh has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 7)) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1339:3-1339:81:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.bhigh has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 3)) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1341:3-1342:83:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.z has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1344:3-1344:89:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.phase has no value, and is fixed during initialization (fixed=true), using available start value (start=Chemical.Interfaces.Phase.Gas) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1347:3-1347:140:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.VmBase has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1348:3-1348:137:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.VmExcess has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. Notification: Performance of NFFlatten.flatten: time 0.003296/0.3173, allocations: 3.63 MB / 466.2 MB, free: 35.55 MB / 410.8 MB Notification: Performance of NFFlatten.resolveConnections: time 0.00059/0.3179, allocations: 0.5495 MB / 466.8 MB, free: 35.28 MB / 410.8 MB Notification: Performance of NFEvalConstants.evaluate: time 0.001609/0.3195, allocations: 2.048 MB / 468.8 MB, free: 34.4 MB / 410.8 MB Notification: Performance of NFSimplifyModel.simplify: time 0.001177/0.3207, allocations: 1.623 MB / 470.4 MB, free: 33.87 MB / 410.8 MB Notification: Performance of NFPackage.collectConstants: time 0.0002254/0.3209, allocations: 311.2 kB / 470.7 MB, free: 33.87 MB / 410.8 MB Notification: Performance of NFFlatten.collectFunctions: time 0.003046/0.3239, allocations: 2.06 MB / 472.8 MB, free: 33.38 MB / 410.8 MB Notification: Performance of NFScalarize.scalarize: time 0.0004299/0.3244, allocations: 1.09 MB / 473.9 MB, free: 32.77 MB / 410.8 MB Notification: Performance of NFVerifyModel.verify: time 0.0006788/0.325, allocations: 1.155 MB / 475 MB, free: 32.25 MB / 410.8 MB Notification: Performance of NFConvertDAE.convert: time 0.005306/0.3303, allocations: 6.278 MB / 481.3 MB, free: 29.48 MB / 410.8 MB Notification: Performance of FrontEnd - DAE generated: time 4.228e-06/0.3303, allocations: 0 / 481.3 MB, free: 29.48 MB / 410.8 MB Notification: Performance of FrontEnd: time 2.154e-06/0.3303, allocations: 1.5 kB / 481.3 MB, free: 29.48 MB / 410.8 MB Notification: Performance of Transformations before backend: time 6.343e-05/0.3304, allocations: 0 / 481.3 MB, free: 29.48 MB / 410.8 MB Notification: Model statistics after passing the front-end and creating the data structures used by the back-end: * Number of equations: 960 * Number of variables: 960 Notification: Performance of Generate backend data structure: time 0.004717/0.3351, allocations: 4.339 MB / 485.7 MB, free: 27.06 MB / 410.8 MB Notification: Performance of prepare preOptimizeDAE: time 4.096e-05/0.3352, allocations: 9.438 kB / 485.7 MB, free: 27.06 MB / 410.8 MB Notification: Performance of preOpt normalInlineFunction (simulation): time 0.001567/0.3367, allocations: 0.892 MB / 486.6 MB, free: 26.71 MB / 410.8 MB Notification: Performance of preOpt evaluateParameters (simulation): time 0.002079/0.3388, allocations: 1.972 MB / 488.5 MB, free: 25.47 MB / 410.8 MB Notification: Performance of preOpt simplifyIfEquations (simulation): time 0.0002494/0.3391, allocations: 0.5055 MB / 489 MB, free: 25.05 MB / 410.8 MB Notification: Performance of preOpt expandDerOperator (simulation): time 0.0002812/0.3393, allocations: 295.9 kB / 489.3 MB, free: 24.95 MB / 410.8 MB Notification: Performance of preOpt clockPartitioning (simulation): time 0.01041/0.3497, allocations: 11.95 MB / 0.4895 GB, free: 19.87 MB / 410.8 MB Notification: Performance of preOpt findStateOrder (simulation): time 4.452e-05/0.3498, allocations: 192 / 0.4895 GB, free: 19.87 MB / 410.8 MB Notification: Performance of preOpt replaceEdgeChange (simulation): time 0.0001555/0.3499, allocations: 120.2 kB / 0.4896 GB, free: 19.77 MB / 410.8 MB Notification: Performance of preOpt inlineArrayEqn (simulation): time 0.0004232/0.3504, allocations: 473.1 kB / 0.4901 GB, free: 19.68 MB / 410.8 MB Notification: Performance of preOpt removeEqualRHS (simulation): time 0.01351/0.3639, allocations: 21.04 MB / 0.5106 GB, free: 11.87 MB / 410.8 MB Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.01879/0.3827, allocations: 20.63 MB / 0.5308 GB, free: 10.77 MB / 426.8 MB Notification: Performance of preOpt comSubExp (simulation): time 0.002954/0.3856, allocations: 2.717 MB / 0.5334 GB, free: 8.043 MB / 426.8 MB Notification: Performance of preOpt resolveLoops (simulation): time 0.00209/0.3877, allocations: 2.265 MB / 0.5357 GB, free: 5.777 MB / 426.8 MB Notification: Performance of preOpt evalFunc (simulation): time 0.0127/0.4004, allocations: 12.76 MB / 0.5481 GB, free: 8.984 MB / 442.8 MB Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 3.261e-05/0.4005, allocations: 50.48 kB / 0.5482 GB, free: 8.93 MB / 442.8 MB Notification: Performance of pre-optimization done (n=188): time 3.487e-06/0.4005, allocations: 0 / 0.5482 GB, free: 8.93 MB / 442.8 MB Error: Internal error It is not possible to select continuous time states because Number of Equations 58 greater than number of States 57 to select from. Error: Internal error Selection of DummyDerivatives failed due to negative system rank of -1! There are 31 unassigned equations and 30 potential states. Error: Internal error - IndexReduction.selectDummyDerivatives2new failed! Error: Internal error - IndexReduction.processComps4New failed! Error: Internal error - IndexReduction.dynamicStateSelectionWork failed! " [Timeout remaining time 660] [Calling sys.exit(0), Time elapsed: 2.0036661252379417] Failed to read output from testmodel.py, exit status != 0: 0.4280880130827427 0.43675117 0.104572994 Calling exit ...