Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr Chemical_master_Chemical.Examples.SimpleReactionsWithJunction2.conf.json loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo): time 0.0007516/0.0007516, allocations: 72.5 kB / 19.93 MB, free: 4.633 MB / 18.57 MB " [Timeout remaining time 180] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo): time 0.0007659/0.0007659, allocations: 177.9 kB / 23.21 MB, free: 1.348 MB / 18.57 MB " [Timeout remaining time 180] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo): time 0.8585/0.8585, allocations: 177.1 MB / 203.5 MB, free: 5.738 MB / 186.7 MB " [Timeout remaining time 179] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/package.mo): time 0.08049/0.08049, allocations: 17.45 MB / 277.4 MB, free: 11.76 MB / 266.7 MB " [Timeout remaining time 180] Using package Chemical with version 2.0.1 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/package.mo) Using package Modelica with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo) Using package Complex with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo) Using package ModelicaServices with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo) Running command: translateModel(Chemical.Examples.SimpleReactionsWithJunction2,tolerance=1e-06,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Chemical_master_Chemical.Examples.SimpleReactionsWithJunction2") translateModel(Chemical.Examples.SimpleReactionsWithJunction2,tolerance=1e-06,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Chemical_master_Chemical.Examples.SimpleReactionsWithJunction2") [Timeout 660] "Notification: Performance of FrontEnd - loaded program: time 2.244e-06/2.244e-06, allocations: 1.188 kB / 412.8 MB, free: 12.44 MB / 330.7 MB Notification: Performance of FrontEnd - Absyn->SCode: time 2.738e-05/2.963e-05, allocations: 2.844 kB / 412.8 MB, free: 12.44 MB / 330.7 MB [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Processes.mo:1084:7-1084:40:writable] Warning: An inner declaration for outer component dropOfCommons could not be found and was automatically generated. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Processes.mo:1084:7-1084:40:writable] Notification: The diagnostics message for the missing inner is: Your model is using an outer \"dropOfCommons\" component but an inner \"dropOfCommons\" component is not defined. Use Chemical.DropOfCommons in your model to specify system properties. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1731:7-1731:66:writable] Warning: An inner declaration for outer component system could not be found and was automatically generated. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1731:7-1731:66:writable] Notification: The diagnostics message for the missing inner is: Your model is using an outer \"system\" component but an inner \"system\" component is not defined. For simulation drag Modelica.Fluid.System into your model to specify system properties. Notification: Performance of NFInst.instantiate(Chemical.Examples.SimpleReactionsWithJunction2): time 0.02592/0.02595, allocations: 35.34 MB / 448.2 MB, free: 5.117 MB / 346.7 MB Notification: Performance of NFInst.instExpressions: time 0.01601/0.04196, allocations: 11.11 MB / 459.3 MB, free: 11.03 MB / 362.7 MB Notification: Performance of NFInst.updateImplicitVariability: time 0.002748/0.04471, allocations: 99.25 kB / 459.4 MB, free: 10.93 MB / 362.7 MB Notification: Performance of NFTyping.typeComponents: time 0.003561/0.04827, allocations: 2.198 MB / 461.6 MB, free: 8.719 MB / 362.7 MB Notification: Performance of NFTyping.typeBindings: time 0.00374/0.05201, allocations: 2.009 MB / 463.6 MB, free: 6.695 MB / 362.7 MB Notification: Performance of NFTyping.typeClassSections: time 0.005584/0.05759, allocations: 4.364 MB / 468 MB, free: 2.312 MB / 362.7 MB [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1332:3-1332:55:writable] Warning: Parameter r.nextProducts[1].data.MM has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1333:3-1333:87:writable] Warning: Parameter r.nextProducts[1].data.Hf has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1334:3-1334:81:writable] Warning: Parameter r.nextProducts[1].data.H0 has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1336:3-1336:82:writable] Warning: Parameter r.nextProducts[1].data.alow has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 7)) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1337:3-1337:79:writable] Warning: Parameter r.nextProducts[1].data.blow has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 3)) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1338:3-1338:84:writable] Warning: Parameter r.nextProducts[1].data.ahigh has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 7)) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1339:3-1339:81:writable] Warning: Parameter r.nextProducts[1].data.bhigh has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 3)) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1341:3-1342:83:writable] Warning: Parameter r.nextProducts[1].data.z has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1344:3-1344:89:writable] Warning: Parameter r.nextProducts[1].data.phase has no value, and is fixed during initialization (fixed=true), using available start value (start=Chemical.Interfaces.Phase.Gas) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1347:3-1347:140:writable] Warning: Parameter r.nextProducts[1].data.VmBase has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1348:3-1348:137:writable] Warning: Parameter r.nextProducts[1].data.VmExcess has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1332:3-1332:55:writable] Warning: Parameter r1.nextProducts[1].data.MM has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1333:3-1333:87:writable] Warning: Parameter r1.nextProducts[1].data.Hf has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1334:3-1334:81:writable] Warning: Parameter r1.nextProducts[1].data.H0 has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1336:3-1336:82:writable] Warning: Parameter r1.nextProducts[1].data.alow has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 7)) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1337:3-1337:79:writable] Warning: Parameter r1.nextProducts[1].data.blow has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 3)) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1338:3-1338:84:writable] Warning: Parameter r1.nextProducts[1].data.ahigh has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 7)) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1339:3-1339:81:writable] Warning: Parameter r1.nextProducts[1].data.bhigh has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 3)) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1341:3-1342:83:writable] Warning: Parameter r1.nextProducts[1].data.z has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1344:3-1344:89:writable] Warning: Parameter r1.nextProducts[1].data.phase has no value, and is fixed during initialization (fixed=true), using available start value (start=Chemical.Interfaces.Phase.Gas) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1347:3-1347:140:writable] Warning: Parameter r1.nextProducts[1].data.VmBase has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1348:3-1348:137:writable] Warning: Parameter r1.nextProducts[1].data.VmExcess has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. Notification: Performance of NFFlatten.flatten: time 0.004507/0.0621, allocations: 5.023 MB / 473 MB, free: 13.27 MB / 378.7 MB Notification: Performance of NFFlatten.resolveConnections: time 0.001207/0.0633, allocations: 1.334 MB / 474.3 MB, free: 11.85 MB / 378.7 MB Notification: Performance of NFEvalConstants.evaluate: time 0.002342/0.06565, allocations: 3.142 MB / 477.5 MB, free: 8.699 MB / 378.7 MB Notification: Performance of NFSimplifyModel.simplify: time 0.00235/0.068, allocations: 2.405 MB / 479.9 MB, free: 6.289 MB / 378.7 MB Notification: Performance of NFPackage.collectConstants: time 0.0005427/0.06854, allocations: 0.5273 MB / 480.4 MB, free: 5.762 MB / 378.7 MB Notification: Performance of NFFlatten.collectFunctions: time 0.00458/0.07312, allocations: 2.316 MB / 482.7 MB, free: 3.441 MB / 378.7 MB Notification: Performance of NFScalarize.scalarize: time 0.0009049/0.07402, allocations: 1.706 MB / 484.4 MB, free: 1.73 MB / 378.7 MB Notification: Performance of NFVerifyModel.verify: time 0.001674/0.0757, allocations: 1.777 MB / 486.2 MB, free: 15.95 MB / 394.7 MB Notification: Performance of NFConvertDAE.convert: time 0.007323/0.08302, allocations: 8.997 MB / 495.2 MB, free: 6.926 MB / 394.7 MB Notification: Performance of FrontEnd - DAE generated: time 3.758e-06/0.08302, allocations: 0 / 495.2 MB, free: 6.926 MB / 394.7 MB Notification: Performance of FrontEnd: time 1.733e-06/0.08303, allocations: 0 / 495.2 MB, free: 6.926 MB / 394.7 MB Notification: Performance of Transformations before backend: time 6.085e-05/0.08309, allocations: 0 / 495.2 MB, free: 6.926 MB / 394.7 MB Notification: Model statistics after passing the front-end and creating the data structures used by the back-end: * Number of equations: 1431 * Number of variables: 1431 Notification: Performance of Generate backend data structure: time 0.006504/0.08959, allocations: 6.125 MB / 0.4896 GB, free: 0.7305 MB / 394.7 MB Notification: Performance of prepare preOptimizeDAE: time 2.469e-05/0.08962, allocations: 8.031 kB / 0.4896 GB, free: 0.7227 MB / 394.7 MB Notification: Performance of preOpt normalInlineFunction (simulation): time 0.002007/0.09162, allocations: 1.324 MB / 0.4909 GB, free: 15.39 MB / 410.7 MB Notification: Performance of preOpt evaluateParameters (simulation): time 0.002521/0.09414, allocations: 2.646 MB / 0.4934 GB, free: 12.68 MB / 410.7 MB Notification: Performance of preOpt simplifyIfEquations (simulation): time 0.0003361/0.09448, allocations: 0.7282 MB / 0.4942 GB, free: 11.86 MB / 410.7 MB Notification: Performance of preOpt expandDerOperator (simulation): time 0.0003901/0.09487, allocations: 456.3 kB / 0.4946 GB, free: 11.41 MB / 410.7 MB Notification: Performance of preOpt clockPartitioning (simulation): time 0.0108/0.1057, allocations: 14.53 MB / 0.5088 GB, free: 12.84 MB / 426.7 MB Notification: Performance of preOpt findStateOrder (simulation): time 4.995e-05/0.1057, allocations: 4.125 kB / 0.5088 GB, free: 12.84 MB / 426.7 MB Notification: Performance of preOpt replaceEdgeChange (simulation): time 0.0002441/0.106, allocations: 184.1 kB / 0.509 GB, free: 12.66 MB / 426.7 MB Notification: Performance of preOpt inlineArrayEqn (simulation): time 0.0003714/0.1063, allocations: 0.5566 MB / 0.5095 GB, free: 12.1 MB / 426.7 MB Notification: Performance of preOpt removeEqualRHS (simulation): time 0.01645/0.1228, allocations: 23.24 MB / 0.5322 GB, free: 4.844 MB / 442.7 MB Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.02877/0.1516, allocations: 29.48 MB / 0.561 GB, free: 7.227 MB / 474.7 MB Notification: Performance of preOpt comSubExp (simulation): time 0.004241/0.1558, allocations: 4.568 MB / 0.5654 GB, free: 2.652 MB / 474.7 MB Notification: Performance of preOpt resolveLoops (simulation): time 0.003515/0.1593, allocations: 3.936 MB / 0.5693 GB, free: 14.71 MB / 490.7 MB Notification: Performance of preOpt evalFunc (simulation): time 0.183/0.3423, allocations: 19.87 MB / 0.5887 GB, free: 148.1 MB / 490.7 MB Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 2.399e-05/0.3423, allocations: 54.62 kB / 0.5887 GB, free: 148.1 MB / 490.7 MB Notification: Performance of pre-optimization done (n=289): time 3.446e-06/0.3423, allocations: 0 / 0.5887 GB, free: 148.1 MB / 490.7 MB Error: Internal error IndexReduction.pantelidesIndexReduction failed! System is structurally singular and cannot be handled because the number of unassigned equations is larger than the number of states. Use -d=bltdump to get more information. Error: Internal error Transformation Module PFPlusExt index Reduction Method Pantelides failed! " [Timeout remaining time 660] [Calling sys.exit(0), Time elapsed: 2.1054995488375425] Failed to read output from testmodel.py, exit status != 0: 0.5357366474345326 0.37520039600000005 0.290871781 Calling exit ...