Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr Chemical_master_Chemical.Examples.SimpleReactionsWithJunction.conf.json loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo): time 0.0008194/0.0008194, allocations: 76.55 kB / 19.93 MB, free: 4.633 MB / 18.57 MB " [Timeout remaining time 180] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo): time 0.0007705/0.0007705, allocations: 181.9 kB / 23.22 MB, free: 1.348 MB / 18.57 MB " [Timeout remaining time 180] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo): time 0.8504/0.8504, allocations: 177.1 MB / 203.5 MB, free: 5.738 MB / 186.7 MB " [Timeout remaining time 179] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/package.mo): time 0.08081/0.08081, allocations: 17.45 MB / 277.4 MB, free: 11.75 MB / 266.7 MB " [Timeout remaining time 180] Using package Chemical with version 2.0.1 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/package.mo) Using package Modelica with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo) Using package Complex with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo) Using package ModelicaServices with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo) Running command: translateModel(Chemical.Examples.SimpleReactionsWithJunction,tolerance=1e-06,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Chemical_master_Chemical.Examples.SimpleReactionsWithJunction") translateModel(Chemical.Examples.SimpleReactionsWithJunction,tolerance=1e-06,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Chemical_master_Chemical.Examples.SimpleReactionsWithJunction") [Timeout 660] "Notification: Performance of FrontEnd - loaded program: time 1.593e-06/1.593e-06, allocations: 0 / 412.8 MB, free: 15.76 MB / 394.7 MB Notification: Performance of FrontEnd - Absyn->SCode: time 1.856e-05/2.015e-05, allocations: 12.19 kB / 412.9 MB, free: 15.75 MB / 394.7 MB [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Processes.mo:1084:7-1084:40:writable] Warning: An inner declaration for outer component dropOfCommons could not be found and was automatically generated. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Processes.mo:1084:7-1084:40:writable] Notification: The diagnostics message for the missing inner is: Your model is using an outer \"dropOfCommons\" component but an inner \"dropOfCommons\" component is not defined. Use Chemical.DropOfCommons in your model to specify system properties. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1731:7-1731:66:writable] Warning: An inner declaration for outer component system could not be found and was automatically generated. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1731:7-1731:66:writable] Notification: The diagnostics message for the missing inner is: Your model is using an outer \"system\" component but an inner \"system\" component is not defined. For simulation drag Modelica.Fluid.System into your model to specify system properties. Notification: Performance of NFInst.instantiate(Chemical.Examples.SimpleReactionsWithJunction): time 0.2782/0.2782, allocations: 41.61 MB / 454.5 MB, free: 42.13 MB / 410.8 MB Notification: Performance of NFInst.instExpressions: time 0.01269/0.2909, allocations: 12.97 MB / 467.4 MB, free: 39.15 MB / 410.8 MB Notification: Performance of NFInst.updateImplicitVariability: time 0.001568/0.2924, allocations: 154 kB / 467.6 MB, free: 39.07 MB / 410.8 MB Notification: Performance of NFTyping.typeComponents: time 0.002947/0.2954, allocations: 2.6 MB / 470.2 MB, free: 38.13 MB / 410.8 MB Notification: Performance of NFTyping.typeBindings: time 0.002866/0.2983, allocations: 2.846 MB / 473 MB, free: 36.24 MB / 410.8 MB Notification: Performance of NFTyping.typeClassSections: time 0.004636/0.3029, allocations: 4.864 MB / 477.9 MB, free: 33.32 MB / 410.8 MB [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1332:3-1332:55:writable] Warning: Parameter r.nextProducts[1].data.MM has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1333:3-1333:87:writable] Warning: Parameter r.nextProducts[1].data.Hf has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1334:3-1334:81:writable] Warning: Parameter r.nextProducts[1].data.H0 has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1336:3-1336:82:writable] Warning: Parameter r.nextProducts[1].data.alow has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 7)) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1337:3-1337:79:writable] Warning: Parameter r.nextProducts[1].data.blow has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 3)) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1338:3-1338:84:writable] Warning: Parameter r.nextProducts[1].data.ahigh has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 7)) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1339:3-1339:81:writable] Warning: Parameter r.nextProducts[1].data.bhigh has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 3)) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1341:3-1342:83:writable] Warning: Parameter r.nextProducts[1].data.z has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1344:3-1344:89:writable] Warning: Parameter r.nextProducts[1].data.phase has no value, and is fixed during initialization (fixed=true), using available start value (start=Chemical.Interfaces.Phase.Gas) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1347:3-1347:140:writable] Warning: Parameter r.nextProducts[1].data.VmBase has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1348:3-1348:137:writable] Warning: Parameter r.nextProducts[1].data.VmExcess has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1332:3-1332:55:writable] Warning: Parameter r1.nextProducts[1].data.MM has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1333:3-1333:87:writable] Warning: Parameter r1.nextProducts[1].data.Hf has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1334:3-1334:81:writable] Warning: Parameter r1.nextProducts[1].data.H0 has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1336:3-1336:82:writable] Warning: Parameter r1.nextProducts[1].data.alow has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 7)) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1337:3-1337:79:writable] Warning: Parameter r1.nextProducts[1].data.blow has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 3)) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1338:3-1338:84:writable] Warning: Parameter r1.nextProducts[1].data.ahigh has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 7)) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1339:3-1339:81:writable] Warning: Parameter r1.nextProducts[1].data.bhigh has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 3)) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1341:3-1342:83:writable] Warning: Parameter r1.nextProducts[1].data.z has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1344:3-1344:89:writable] Warning: Parameter r1.nextProducts[1].data.phase has no value, and is fixed during initialization (fixed=true), using available start value (start=Chemical.Interfaces.Phase.Gas) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1347:3-1347:140:writable] Warning: Parameter r1.nextProducts[1].data.VmBase has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1348:3-1348:137:writable] Warning: Parameter r1.nextProducts[1].data.VmExcess has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1332:3-1332:55:writable] Warning: Parameter r_ref.nextProducts[1].data.MM has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1333:3-1333:87:writable] Warning: Parameter r_ref.nextProducts[1].data.Hf has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1334:3-1334:81:writable] Warning: Parameter r_ref.nextProducts[1].data.H0 has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1336:3-1336:82:writable] Warning: Parameter r_ref.nextProducts[1].data.alow has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 7)) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1337:3-1337:79:writable] Warning: Parameter r_ref.nextProducts[1].data.blow has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 3)) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1338:3-1338:84:writable] Warning: Parameter r_ref.nextProducts[1].data.ahigh has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 7)) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1339:3-1339:81:writable] Warning: Parameter r_ref.nextProducts[1].data.bhigh has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 3)) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1341:3-1342:83:writable] Warning: Parameter r_ref.nextProducts[1].data.z has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1344:3-1344:89:writable] Warning: Parameter r_ref.nextProducts[1].data.phase has no value, and is fixed during initialization (fixed=true), using available start value (start=Chemical.Interfaces.Phase.Gas) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1347:3-1347:140:writable] Warning: Parameter r_ref.nextProducts[1].data.VmBase has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1348:3-1348:137:writable] Warning: Parameter r_ref.nextProducts[1].data.VmExcess has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. Notification: Performance of NFFlatten.flatten: time 0.004737/0.3076, allocations: 7.52 MB / 485.4 MB, free: 29.62 MB / 410.8 MB Notification: Performance of NFFlatten.resolveConnections: time 0.001583/0.3092, allocations: 1.679 MB / 487.1 MB, free: 28.81 MB / 410.8 MB Notification: Performance of NFEvalConstants.evaluate: time 0.00346/0.3127, allocations: 4.555 MB / 491.6 MB, free: 26.77 MB / 410.8 MB Notification: Performance of NFSimplifyModel.simplify: time 0.002895/0.3156, allocations: 3.521 MB / 495.2 MB, free: 25.57 MB / 410.8 MB Notification: Performance of NFPackage.collectConstants: time 0.0007457/0.3163, allocations: 0.7401 MB / 495.9 MB, free: 25.57 MB / 410.8 MB Notification: Performance of NFFlatten.collectFunctions: time 0.004061/0.3204, allocations: 2.554 MB / 498.5 MB, free: 25.07 MB / 410.8 MB Notification: Performance of NFScalarize.scalarize: time 0.001378/0.3217, allocations: 2.465 MB / 0.4892 GB, free: 23.67 MB / 410.8 MB Notification: Performance of NFVerifyModel.verify: time 0.001997/0.3237, allocations: 2.574 MB / 0.4917 GB, free: 22.47 MB / 410.8 MB Notification: Performance of NFConvertDAE.convert: time 0.01002/0.3338, allocations: 12.2 MB / 0.5036 GB, free: 17.02 MB / 410.8 MB Notification: Performance of FrontEnd - DAE generated: time 3.506e-06/0.3338, allocations: 3.812 kB / 0.5036 GB, free: 17.02 MB / 410.8 MB Notification: Performance of FrontEnd: time 1.132e-06/0.3338, allocations: 4 kB / 0.5036 GB, free: 17.02 MB / 410.8 MB Notification: Performance of Transformations before backend: time 0.0001097/0.3339, allocations: 0 / 0.5036 GB, free: 17.02 MB / 410.8 MB Notification: Model statistics after passing the front-end and creating the data structures used by the back-end: * Number of equations: 2093 * Number of variables: 2093 Notification: Performance of Generate backend data structure: time 0.008279/0.3422, allocations: 8.827 MB / 0.5122 GB, free: 11 MB / 410.8 MB Notification: Performance of prepare preOptimizeDAE: time 3.651e-05/0.3422, allocations: 10.81 kB / 0.5123 GB, free: 11 MB / 410.8 MB Notification: Performance of preOpt normalInlineFunction (simulation): time 0.002814/0.345, allocations: 2.002 MB / 0.5142 GB, free: 9.965 MB / 410.8 MB Notification: Performance of preOpt evaluateParameters (simulation): time 0.003073/0.3481, allocations: 3.893 MB / 0.518 GB, free: 7.035 MB / 410.8 MB Notification: Performance of preOpt simplifyIfEquations (simulation): time 0.0003537/0.3484, allocations: 1.107 MB / 0.5191 GB, free: 6.086 MB / 410.8 MB Notification: Performance of preOpt expandDerOperator (simulation): time 0.0004964/0.3489, allocations: 0.6443 MB / 0.5197 GB, free: 5.863 MB / 410.8 MB Notification: Performance of preOpt clockPartitioning (simulation): time 0.01508/0.364, allocations: 22.52 MB / 0.5417 GB, free: 432 kB / 426.8 MB Notification: Performance of preOpt findStateOrder (simulation): time 7.447e-05/0.3641, allocations: 192 / 0.5417 GB, free: 432 kB / 426.8 MB Notification: Performance of preOpt replaceEdgeChange (simulation): time 0.0003726/0.3645, allocations: 264.1 kB / 0.542 GB, free: 168 kB / 426.8 MB Notification: Performance of preOpt inlineArrayEqn (simulation): time 0.0005455/0.365, allocations: 0.8345 MB / 0.5428 GB, free: 15.32 MB / 442.8 MB Notification: Performance of preOpt removeEqualRHS (simulation): time 0.02491/0.3899, allocations: 37.3 MB / 0.5792 GB, free: 9.996 MB / 474.8 MB Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.2095/0.5994, allocations: 44.59 MB / 0.6227 GB, free: 139.1 MB / 0.4949 GB Notification: Performance of preOpt comSubExp (simulation): time 0.006428/0.6059, allocations: 6.946 MB / 0.6295 GB, free: 137.5 MB / 0.4949 GB Notification: Performance of preOpt resolveLoops (simulation): time 0.004501/0.6104, allocations: 5.918 MB / 0.6353 GB, free: 134.6 MB / 0.4949 GB Notification: Performance of preOpt evalFunc (simulation): time 0.0222/0.6326, allocations: 29.32 MB / 0.6639 GB, free: 119.2 MB / 0.4949 GB Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 2.838e-05/0.6326, allocations: 60.91 kB / 0.664 GB, free: 119.1 MB / 0.4949 GB Notification: Performance of pre-optimization done (n=440): time 4.869e-06/0.6326, allocations: 0 / 0.664 GB, free: 119.1 MB / 0.4949 GB Error: Internal error IndexReduction.pantelidesIndexReduction failed! System is structurally singular and cannot be handled because the number of unassigned equations is larger than the number of states. Use -d=bltdump to get more information. Error: Internal error Transformation Module PFPlusExt index Reduction Method Pantelides failed! " [Timeout remaining time 659] [Calling sys.exit(0), Time elapsed: 2.2573536531999707] Failed to read output from testmodel.py, exit status != 0: 0.6643461156636477 0.670035358 0.33499575299999995 Calling exit ...