Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr Chemical_Chemical.Obsolete.Examples.HydrogenCombustion.conf.json
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo): time 0.0007312/0.0007312, allocations: 76.55 kB / 19.93 MB, free: 4.637 MB / 18.57 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo): time 0.0007612/0.0007612, allocations: 177.9 kB / 23.22 MB, free: 1.352 MB / 18.57 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo): time 0.8457/0.8457, allocations: 177.1 MB / 203.5 MB, free: 5.734 MB / 186.7 MB
"
[Timeout remaining time 179]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/package.mo): time 0.0827/0.0827, allocations: 17.37 MB / 277.3 MB, free: 11.85 MB / 266.7 MB
"
[Timeout remaining time 180]
Using package Chemical with version 2.0.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/package.mo)
Using package Modelica with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo)
Using package Complex with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo)
Using package ModelicaServices with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo)
Running command: translateModel(Chemical.Obsolete.Examples.HydrogenCombustion,tolerance=1e-06,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Chemical_Chemical.Obsolete.Examples.HydrogenCombustion")
translateModel(Chemical.Obsolete.Examples.HydrogenCombustion,tolerance=1e-06,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Chemical_Chemical.Obsolete.Examples.HydrogenCombustion") [Timeout 660]
"Notification: Performance of FrontEnd - loaded program: time 1.894e-06/1.894e-06, allocations: 0 / 412.7 MB, free: 15.93 MB / 394.7 MB
Notification: Performance of FrontEnd - Absyn->SCode: time 2.243e-05/2.433e-05, allocations: 2.281 kB / 412.7 MB, free: 15.92 MB / 394.7 MB
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/Obsolete.mo:14337:7-14337:66:writable] Warning: An inner declaration for outer component system could not be found and was automatically generated.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/Obsolete.mo:14337:7-14337:66:writable] Notification: The diagnostics message for the missing inner is: 
Your model is using an outer \"system\" component but
an inner \"system\" component is not defined.
For simulation drag Modelica.Fluid.System into your model
to specify system properties.
Notification: Performance of NFInst.instantiate(Chemical.Obsolete.Examples.HydrogenCombustion): time 0.02473/0.02475, allocations: 28.88 MB / 441.6 MB, free: 3.098 MB / 410.7 MB
Notification: Performance of NFInst.instExpressions: time 0.2487/0.2735, allocations: 134.4 MB / 0.5625 GB, free: 348 kB / 442.7 MB
Notification: Performance of NFInst.updateImplicitVariability: time 0.001003/0.2745, allocations: 31.75 kB / 0.5625 GB, free: 316 kB / 442.7 MB
Notification: Performance of NFTyping.typeComponents: time 0.0009526/0.2754, allocations: 488 kB / 0.563 GB, free: 15.83 MB / 458.7 MB
Notification: Performance of NFTyping.typeBindings: time 0.00288/0.2783, allocations: 1.717 MB / 0.5647 GB, free: 14.1 MB / 458.7 MB
Notification: Performance of NFTyping.typeClassSections: time 0.005466/0.2838, allocations: 3.076 MB / 0.5677 GB, free: 11 MB / 458.7 MB
Notification: Performance of NFFlatten.flatten: time 0.001873/0.2857, allocations: 2.7 MB / 0.5703 GB, free: 8.297 MB / 458.7 MB
Notification: Performance of NFFlatten.resolveConnections: time 0.0008852/0.2866, allocations: 1.213 MB / 0.5715 GB, free: 7.051 MB / 458.7 MB
Notification: Performance of NFEvalConstants.evaluate: time 0.001307/0.2879, allocations: 1.763 MB / 0.5732 GB, free: 5.285 MB / 458.7 MB
Notification: Performance of NFSimplifyModel.simplify: time 0.0009042/0.2888, allocations: 1.13 MB / 0.5743 GB, free: 4.152 MB / 458.7 MB
Notification: Performance of NFPackage.collectConstants: time 0.0001906/0.289, allocations: 224 kB / 0.5745 GB, free: 3.934 MB / 458.7 MB
Notification: Performance of NFFlatten.collectFunctions: time 0.00345/0.2924, allocations: 2.238 MB / 0.5767 GB, free: 1.691 MB / 458.7 MB
Notification: Performance of NFScalarize.scalarize: time 0.0003057/0.2927, allocations: 0.5762 MB / 0.5773 GB, free: 1.113 MB / 458.7 MB
Notification: Performance of NFVerifyModel.verify: time 0.0005005/0.2932, allocations: 0.838 MB / 0.5781 GB, free: 280 kB / 458.7 MB
Notification: Performance of NFConvertDAE.convert: time 0.004519/0.2977, allocations: 5.354 MB / 0.5833 GB, free: 10.9 MB / 474.7 MB
Notification: Performance of FrontEnd - DAE generated: time 3.837e-06/0.2977, allocations: 4 kB / 0.5833 GB, free: 10.9 MB / 474.7 MB
Notification: Performance of FrontEnd: time 1.784e-06/0.2977, allocations: 0 / 0.5833 GB, free: 10.9 MB / 474.7 MB
Notification: Performance of Transformations before backend: time 1.758e-05/0.2978, allocations: 3.938 kB / 0.5833 GB, free: 10.89 MB / 474.7 MB
Notification: Model statistics after passing the front-end and creating the data structures used by the back-end:
 * Number of equations: 492
 * Number of variables: 492
Notification: Performance of Generate backend data structure: time 0.002619/0.3004, allocations: 2.804 MB / 0.5861 GB, free: 8.051 MB / 474.7 MB
Notification: Performance of prepare preOptimizeDAE: time 3.283e-05/0.3004, allocations: 12.03 kB / 0.5861 GB, free: 8.039 MB / 474.7 MB
Notification: Performance of preOpt normalInlineFunction (simulation): time 0.00231/0.3027, allocations: 0.8738 MB / 0.587 GB, free: 7.172 MB / 474.7 MB
Notification: Performance of preOpt evaluateParameters (simulation): time 0.0009549/0.3037, allocations: 0.9088 MB / 0.5878 GB, free: 6.238 MB / 474.7 MB
Notification: Performance of preOpt simplifyIfEquations (simulation): time 0.000128/0.3038, allocations: 255.2 kB / 0.5881 GB, free: 5.965 MB / 474.7 MB
Notification: Performance of preOpt expandDerOperator (simulation): time 0.0001936/0.304, allocations: 204.3 kB / 0.5883 GB, free: 5.766 MB / 474.7 MB
Notification: Performance of preOpt clockPartitioning (simulation): time 0.002106/0.3061, allocations: 2.145 MB / 0.5904 GB, free: 3.578 MB / 474.7 MB
Notification: Performance of preOpt findStateOrder (simulation): time 2.756e-05/0.3061, allocations: 192 / 0.5904 GB, free: 3.578 MB / 474.7 MB
Notification: Performance of preOpt replaceEdgeChange (simulation): time 0.0001228/0.3062, allocations: 80.38 kB / 0.5904 GB, free: 3.5 MB / 474.7 MB
Notification: Performance of preOpt inlineArrayEqn (simulation): time 2.407e-05/0.3063, allocations: 59.88 kB / 0.5905 GB, free: 3.441 MB / 474.7 MB
Notification: Performance of preOpt removeEqualRHS (simulation): time 0.002343/0.3086, allocations: 2.281 MB / 0.5927 GB, free: 1.16 MB / 474.7 MB
Warning: The model contains alias variables with redundant start and/or conflicting nominal values. It is recommended to resolve the conflicts, because otherwise the system could be hard to solve. To print the conflicting alias sets and the chosen candidates please use -d=aliasConflicts.
Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.006024/0.3146, allocations: 5.831 MB / 0.5984 GB, free: 11.21 MB / 490.7 MB
Notification: Performance of preOpt comSubExp (simulation): time 0.002224/0.3169, allocations: 1.562 MB / 0.6 GB, free: 9.633 MB / 490.7 MB
Notification: Performance of preOpt resolveLoops (simulation): time 0.001096/0.318, allocations: 0.7394 MB / 0.6007 GB, free: 8.887 MB / 490.7 MB
Notification: Performance of preOpt evalFunc (simulation): time 0.004129/0.3221, allocations: 3.909 MB / 0.6045 GB, free: 4.949 MB / 490.7 MB
Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 2.589e-05/0.3221, allocations: 55.81 kB / 0.6045 GB, free: 4.883 MB / 490.7 MB
Notification: Performance of pre-optimization done (n=132): time 1.893e-06/0.3221, allocations: 0 / 0.6045 GB, free: 4.883 MB / 490.7 MB
Notification: Performance of matching and sorting (n=174): time 0.009453/0.3316, allocations: 6.507 MB / 0.6109 GB, free: 14.29 MB / 0.4948 GB
Notification: Performance of inlineWhenForInitialization (initialization): time 4.939e-05/0.3316, allocations: 99.05 kB / 0.611 GB, free: 14.17 MB / 0.4948 GB
Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.0007049/0.3323, allocations: 0.9429 MB / 0.6119 GB, free: 13.21 MB / 0.4948 GB
Notification: Performance of collectPreVariables (initialization): time 7.338e-05/0.3324, allocations: 53.7 kB / 0.612 GB, free: 13.15 MB / 0.4948 GB
Notification: Performance of collectInitialEqns (initialization): time 0.0003652/0.3328, allocations: 0.9103 MB / 0.6129 GB, free: 12.23 MB / 0.4948 GB
Notification: Performance of collectInitialBindings (initialization): time 0.0003033/0.3331, allocations: 0.6197 MB / 0.6135 GB, free: 11.61 MB / 0.4948 GB
Notification: Performance of simplifyInitialFunctions (initialization): time 0.0003544/0.3334, allocations: 407.5 kB / 0.6138 GB, free: 11.2 MB / 0.4948 GB
Notification: Performance of setup shared object (initialization): time 6.362e-05/0.3335, allocations: 303.4 kB / 0.6141 GB, free: 10.9 MB / 0.4948 GB
Notification: Performance of preBalanceInitialSystem (initialization): time 0.0009779/0.3345, allocations: 0.6248 MB / 0.6147 GB, free: 10.27 MB / 0.4948 GB
Notification: Performance of partitionIndependentBlocks (initialization): time 0.0009615/0.3354, allocations: 1.189 MB / 0.6159 GB, free: 8.832 MB / 0.4948 GB
Notification: Performance of analyzeInitialSystem (initialization): time 0.001808/0.3372, allocations: 1.992 MB / 0.6179 GB, free: 6.594 MB / 0.4948 GB
Notification: Performance of solveInitialSystemEqSystem (initialization): time 6.412e-06/0.3372, allocations: 8 kB / 0.6179 GB, free: 6.586 MB / 0.4948 GB
Notification: Performance of matching and sorting (n=262) (initialization): time 0.002904/0.3401, allocations: 2.567 MB / 0.6204 GB, free: 3.992 MB / 0.4948 GB
Notification: Performance of prepare postOptimizeDAE: time 1.973e-05/0.3402, allocations: 16 kB / 0.6204 GB, free: 3.977 MB / 0.4948 GB
Notification: Performance of postOpt simplifyComplexFunction (initialization): time 1.437e-05/0.3402, allocations: 23.25 kB / 0.6204 GB, free: 3.957 MB / 0.4948 GB
Notification: Performance of postOpt tearingSystem (initialization): time 0.001314/0.3415, allocations: 0.5981 MB / 0.621 GB, free: 3.344 MB / 0.4948 GB
Notification: Performance of postOpt solveSimpleEquations (initialization): time 0.001055/0.3425, allocations: 487.3 kB / 0.6215 GB, free: 2.867 MB / 0.4948 GB
Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 0.1459/0.4884, allocations: 8.792 MB / 0.63 GB, free: 147.8 MB / 0.4948 GB
Notification: Performance of postOpt simplifyAllExpressions (initialization): time 0.0008338/0.4892, allocations: 66.48 kB / 0.6301 GB, free: 147.8 MB / 0.4948 GB
Notification: Performance of postOpt collapseArrayExpressions (initialization): time 0.0001313/0.4894, allocations: 160.2 kB / 0.6303 GB, free: 147.8 MB / 0.4948 GB
Notification: Model statistics after passing the back-end for initialization:
 * Number of independent subsystems: 80
 * Number of states: 0 ()
 * Number of discrete variables: 0 ()
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for initialization (208):
 * Single equations (assignments): 202
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 0
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 6
 * Mixed (continuous/discrete) equation systems: 0
Notification: Torn system details for strict tearing set:
 * Linear torn systems (#iteration vars, #inner vars, density): 3 systems
   {(1,9,100.0%), (1,11,100.0%), (1,6,100.0%)}
 * Non-linear torn systems (#iteration vars, #inner vars): 3 systems
   {(1,6), (1,10), (1,12)}
Notification: Performance of prepare postOptimizeDAE: time 0.0005668/0.4899, allocations: 433.7 kB / 0.6307 GB, free: 147.5 MB / 0.4948 GB
Notification: Performance of postOpt lateInlineFunction (simulation): time 0.0001577/0.4901, allocations: 149.3 kB / 0.6308 GB, free: 147.5 MB / 0.4948 GB
Notification: Performance of postOpt wrapFunctionCalls (simulation): time 0.002883/0.493, allocations: 2.616 MB / 0.6334 GB, free: 146.6 MB / 0.4948 GB
Notification: Performance of postOpt inlineArrayEqn (simulation): time 7.985e-06/0.493, allocations: 19.97 kB / 0.6334 GB, free: 146.6 MB / 0.4948 GB
Notification: Performance of postOpt constantLinearSystem (simulation): time 5.009e-06/0.493, allocations: 5.266 kB / 0.6334 GB, free: 146.6 MB / 0.4948 GB
Notification: Performance of postOpt simplifysemiLinear (simulation): time 1.094e-05/0.493, allocations: 9.938 kB / 0.6334 GB, free: 146.6 MB / 0.4948 GB
Notification: Performance of postOpt removeSimpleEquations (simulation): time 0.003481/0.4965, allocations: 3.67 MB / 0.637 GB, free: 145 MB / 0.4948 GB
Notification: Performance of postOpt simplifyComplexFunction (simulation): time 4.138e-06/0.4965, allocations: 0 / 0.637 GB, free: 145 MB / 0.4948 GB
Notification: Performance of postOpt solveSimpleEquations (simulation): time 0.0008956/0.4974, allocations: 381.7 kB / 0.6373 GB, free: 145 MB / 0.4948 GB
Notification: Performance of postOpt tearingSystem (simulation): time 0.0008812/0.4983, allocations: 0.4971 MB / 0.6378 GB, free: 144.9 MB / 0.4948 GB
Notification: Performance of postOpt inputDerivativesUsed (simulation): time 7.536e-05/0.4983, allocations: 77.02 kB / 0.6379 GB, free: 144.8 MB / 0.4948 GB
Notification: Performance of postOpt calculateStrongComponentJacobians (simulation): time 0.002572/0.5009, allocations: 6.252 MB / 0.644 GB, free: 139.4 MB / 0.4948 GB
Notification: Performance of postOpt calculateStateSetsJacobians (simulation): time 1.874e-06/0.5009, allocations: 2.812 kB / 0.644 GB, free: 139.4 MB / 0.4948 GB
Notification: Performance of postOpt symbolicJacobian (simulation): time 0.002883/0.5038, allocations: 3.138 MB / 0.6471 GB, free: 138.1 MB / 0.4948 GB
Notification: Performance of postOpt removeConstants (simulation): time 8.968e-05/0.5039, allocations: 135.5 kB / 0.6472 GB, free: 138.1 MB / 0.4948 GB
Notification: Performance of postOpt simplifyTimeIndepFuncCalls (simulation): time 0.0001078/0.504, allocations: 39.5 kB / 0.6472 GB, free: 138 MB / 0.4948 GB
Notification: Performance of postOpt simplifyAllExpressions (simulation): time 0.0003683/0.5044, allocations: 37.5 kB / 0.6473 GB, free: 138 MB / 0.4948 GB
Notification: Performance of postOpt findZeroCrossings (simulation): time 0.0001661/0.5045, allocations: 179.7 kB / 0.6475 GB, free: 138 MB / 0.4948 GB
Notification: Performance of postOpt collapseArrayExpressions (simulation): time 9.45e-05/0.5046, allocations: 124.5 kB / 0.6476 GB, free: 138 MB / 0.4948 GB
Notification: Performance of sorting global known variables: time 0.0003691/0.505, allocations: 0.5883 MB / 0.6481 GB, free: 137.7 MB / 0.4948 GB
Notification: Performance of sort global known variables: time 6e-08/0.505, allocations: 0 / 0.6481 GB, free: 137.7 MB / 0.4948 GB
Notification: Performance of remove unused functions: time 0.00138/0.5064, allocations: 0.8325 MB / 0.649 GB, free: 137.6 MB / 0.4948 GB
Notification: Model statistics after passing the back-end for simulation:
 * Number of independent subsystems: 6
 * Number of states: 8 (H2_gas.logn,O2_gas.logn,H2O_gas.molarVolume,H2O_gas.logn,H2_gas1.logn,O2_gas1.logn,H2O_gas1.molarVolume,H2O_gas1.logn)
 * Number of discrete variables: 0 ()
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for simulation (154):
 * Single equations (assignments): 149
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 0
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 5
 * Mixed (continuous/discrete) equation systems: 0
Notification: Torn system details for strict tearing set:
 * Linear torn systems (#iteration vars, #inner vars, density): 3 systems
   {(1,9,100.0%), (1,6,100.0%), (1,7,100.0%)}
 * Non-linear torn systems (#iteration vars, #inner vars): 2 systems
   {(1,10), (1,8)}
Notification: Performance of Backend phase and start with SimCode phase: time 0.0009088/0.5073, allocations: 0.8386 MB / 0.6498 GB, free: 137.5 MB / 0.4948 GB
Notification: Performance of simCode: created initialization part: time 0.002001/0.5093, allocations: 2.326 MB / 0.6521 GB, free: 136.4 MB / 0.4948 GB
Notification: Performance of simCode: created event and clocks part: time 2.004e-06/0.5093, allocations: 0 / 0.6521 GB, free: 136.4 MB / 0.4948 GB
Notification: Performance of simCode: created simulation system equations: time 0.001022/0.5103, allocations: 1.317 MB / 0.6533 GB, free: 135.7 MB / 0.4948 GB
Notification: Performance of simCode: created of all other equations (e.g. parameter, nominal, assert, etc): time 0.0007892/0.5111, allocations: 305 kB / 0.6536 GB, free: 135.6 MB / 0.4948 GB
Notification: Performance of simCode: created linear, non-linear and system jacobian parts: time 0.002962/0.5141, allocations: 3.497 MB / 0.657 GB, free: 133.9 MB / 0.4948 GB
Notification: Performance of simCode: some other stuff during SimCode phase: time 0.0004486/0.5145, allocations: 0.8231 MB / 0.6578 GB, free: 133.7 MB / 0.4948 GB
Notification: Performance of simCode: all other stuff during SimCode phase: time 0.0005329/0.515, allocations: 340.4 kB / 0.6582 GB, free: 133.7 MB / 0.4948 GB
Notification: Performance of SimCode: time 6.31e-07/0.515, allocations: 0 / 0.6582 GB, free: 133.7 MB / 0.4948 GB
Notification: Performance of Templates: time 0.03505/0.5501, allocations: 70.15 MB / 0.7267 GB, free: 86.83 MB / 0.4948 GB
"
[Timeout remaining time 659]
make -j1 -f Chemical_Chemical.Obsolete.Examples.HydrogenCombustion.makefile [Timeout 660]
(rm -f Chemical_Chemical.Obsolete.Examples.HydrogenCombustion.pipe ; mkfifo Chemical_Chemical.Obsolete.Examples.HydrogenCombustion.pipe ; head -c 1048576 < Chemical_Chemical.Obsolete.Examples.HydrogenCombustion.pipe >> ../files/Chemical_Chemical.Obsolete.Examples.HydrogenCombustion.sim & ./Chemical_Chemical.Obsolete.Examples.HydrogenCombustion  -abortSlowSimulation -alarm=480 -lv LOG_STATS > Chemical_Chemical.Obsolete.Examples.HydrogenCombustion.pipe 2>&1) [Timeout 480]
[Calling sys.exit(0), Time elapsed: 7.5989973889663815]
Failed to read output from testmodel.py, exit status != 0:
0.5559219904243946 0.56095557 0.26189335199999997
Calling exit ...
<OMPython.OMCSessionZMQ object at 0x7f2c2b3f42f0>