Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr Chemical_Chemical.Obsolete.Examples.Hemoglobin.HemoglobinMultipleAllostery.conf.json loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo): time 0.0008627/0.0008627, allocations: 72.5 kB / 19.93 MB, free: 4.633 MB / 18.57 MB " [Timeout remaining time 180] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo): time 0.0009681/0.0009681, allocations: 177.9 kB / 23.21 MB, free: 1.348 MB / 18.57 MB " [Timeout remaining time 180] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo): time 0.8546/0.8546, allocations: 177.1 MB / 203.5 MB, free: 5.73 MB / 186.7 MB " [Timeout remaining time 179] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/package.mo): time 0.08171/0.08171, allocations: 17.37 MB / 277.3 MB, free: 11.84 MB / 266.7 MB " [Timeout remaining time 180] Using package Chemical with version 2.0.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/package.mo) Using package Modelica with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo) Using package Complex with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo) Using package ModelicaServices with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo) Running command: translateModel(Chemical.Obsolete.Examples.Hemoglobin.HemoglobinMultipleAllostery,tolerance=1e-06,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Chemical_Chemical.Obsolete.Examples.Hemoglobin.HemoglobinMultipleAllostery") translateModel(Chemical.Obsolete.Examples.Hemoglobin.HemoglobinMultipleAllostery,tolerance=1e-06,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Chemical_Chemical.Obsolete.Examples.Hemoglobin.HemoglobinMultipleAllostery") [Timeout 660] "Notification: Performance of FrontEnd - loaded program: time 1.663e-06/1.663e-06, allocations: 0 / 412.7 MB, free: 15.91 MB / 394.7 MB Notification: Performance of FrontEnd - Absyn->SCode: time 2.281e-05/2.448e-05, allocations: 6.281 kB / 412.7 MB, free: 15.9 MB / 394.7 MB [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/Obsolete.mo:14337:7-14337:66:writable] Warning: An inner declaration for outer component system could not be found and was automatically generated. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/Obsolete.mo:14337:7-14337:66:writable] Notification: The diagnostics message for the missing inner is: Your model is using an outer \"system\" component but an inner \"system\" component is not defined. For simulation drag Modelica.Fluid.System into your model to specify system properties. Notification: Performance of NFInst.instantiate(Chemical.Obsolete.Examples.Hemoglobin.HemoglobinMultipleAllostery): time 0.2836/0.2836, allocations: 40.25 MB / 453 MB, free: 42.27 MB / 410.8 MB Notification: Performance of NFInst.instExpressions: time 0.03909/0.3227, allocations: 64.08 MB / 0.505 GB, free: 4.766 MB / 410.8 MB Notification: Performance of NFInst.updateImplicitVariability: time 0.003303/0.326, allocations: 82.53 kB / 0.505 GB, free: 4.723 MB / 410.8 MB Notification: Performance of NFTyping.typeComponents: time 0.003338/0.3293, allocations: 1.489 MB / 0.5065 GB, free: 3.93 MB / 410.8 MB Notification: Performance of NFTyping.typeBindings: time 0.01436/0.3437, allocations: 6.202 MB / 0.5125 GB, free: 48 kB / 410.8 MB Notification: Performance of NFTyping.typeClassSections: time 0.02219/0.3659, allocations: 10.7 MB / 0.523 GB, free: 9.527 MB / 426.8 MB Notification: Performance of NFFlatten.flatten: time 0.01793/0.3838, allocations: 27.43 MB / 0.5498 GB, free: 8.84 MB / 442.8 MB Notification: Performance of NFFlatten.resolveConnections: time 0.01698/0.4008, allocations: 16.3 MB / 0.5657 GB, free: 8.426 MB / 458.8 MB Notification: Performance of NFEvalConstants.evaluate: time 0.03299/0.4338, allocations: 23.18 MB / 0.5883 GB, free: 1.215 MB / 474.8 MB Notification: Performance of NFSimplifyModel.simplify: time 0.02442/0.4582, allocations: 16.43 MB / 0.6044 GB, free: 0.7539 MB / 490.8 MB Notification: Performance of NFPackage.collectConstants: time 0.008476/0.4667, allocations: 3.129 MB / 0.6074 GB, free: 13.62 MB / 0.4949 GB Notification: Performance of NFFlatten.collectFunctions: time 0.02646/0.4931, allocations: 10.38 MB / 0.6176 GB, free: 3.23 MB / 0.4949 GB Notification: Performance of NFScalarize.scalarize: time 0.1967/0.6898, allocations: 7.158 MB / 0.6246 GB, free: 51.34 MB / 0.4949 GB Notification: Performance of NFVerifyModel.verify: time 0.01922/0.709, allocations: 9.409 MB / 0.6338 GB, free: 51.34 MB / 0.4949 GB Notification: Performance of NFConvertDAE.convert: time 0.0553/0.7643, allocations: 47.5 MB / 0.6801 GB, free: 46.14 MB / 0.4949 GB Notification: Performance of FrontEnd - DAE generated: time 6.422e-06/0.7643, allocations: 3.5 kB / 0.6801 GB, free: 46.14 MB / 0.4949 GB Notification: Performance of FrontEnd: time 1.884e-06/0.7643, allocations: 0 / 0.6801 GB, free: 46.14 MB / 0.4949 GB Notification: Performance of Transformations before backend: time 0.0009529/0.7653, allocations: 0 / 0.6801 GB, free: 46.14 MB / 0.4949 GB Notification: Model statistics after passing the front-end and creating the data structures used by the back-end: * Number of equations: 3808 * Number of variables: 3808 Notification: Performance of Generate backend data structure: time 0.06019/0.8255, allocations: 23.5 MB / 0.7031 GB, free: 32.48 MB / 0.4949 GB Notification: Performance of prepare preOptimizeDAE: time 4.058e-05/0.8255, allocations: 7.938 kB / 0.7031 GB, free: 32.48 MB / 0.4949 GB Notification: Performance of preOpt normalInlineFunction (simulation): time 0.01597/0.8415, allocations: 3.972 MB / 0.707 GB, free: 30.71 MB / 0.4949 GB Notification: Performance of preOpt evaluateParameters (simulation): time 0.02184/0.8634, allocations: 12.62 MB / 0.7193 GB, free: 24.14 MB / 0.4949 GB Notification: Performance of preOpt simplifyIfEquations (simulation): time 0.001356/0.8647, allocations: 3.077 MB / 0.7223 GB, free: 20.68 MB / 0.4949 GB Notification: Performance of preOpt expandDerOperator (simulation): time 0.008365/0.8731, allocations: 1.531 MB / 0.7238 GB, free: 19.15 MB / 0.4949 GB Notification: Performance of preOpt clockPartitioning (simulation): time 0.07024/0.9433, allocations: 35.25 MB / 0.7582 GB, free: 15.68 MB / 0.5262 GB Notification: Performance of preOpt findStateOrder (simulation): time 0.0005573/0.9439, allocations: 11.03 kB / 0.7582 GB, free: 15.67 MB / 0.5262 GB Notification: Performance of preOpt replaceEdgeChange (simulation): time 0.008524/0.9524, allocations: 0.5863 MB / 0.7588 GB, free: 15.09 MB / 0.5262 GB Notification: Performance of preOpt inlineArrayEqn (simulation): time 0.0001848/0.9526, allocations: 363.9 kB / 0.7592 GB, free: 14.73 MB / 0.5262 GB Notification: Performance of preOpt removeEqualRHS (simulation): time 0.07766/1.03, allocations: 47.47 MB / 0.8055 GB, free: 15.27 MB / 0.573 GB Warning: The model contains alias variables with redundant start and/or conflicting nominal values. It is recommended to resolve the conflicts, because otherwise the system could be hard to solve. To print the conflicting alias sets and the chosen candidates please use -d=aliasConflicts. Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.3905/1.421, allocations: 116.6 MB / 0.9194 GB, free: 154.5 MB / 0.5887 GB Notification: Performance of preOpt comSubExp (simulation): time 0.5271/1.948, allocations: 218.4 MB / 1.133 GB, free: 189.8 MB / 0.5887 GB Notification: Performance of preOpt resolveLoops (simulation): time 0.02521/1.973, allocations: 18.49 MB / 1.151 GB, free: 181.4 MB / 0.5887 GB Notification: Performance of preOpt evalFunc (simulation): time 0.1137/2.087, allocations: 76.53 MB / 1.225 GB, free: 111.6 MB / 0.5887 GB Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 6.64e-05/2.087, allocations: 134.4 kB / 1.226 GB, free: 111.4 MB / 0.5887 GB Notification: Performance of preOpt simplifyInStream (simulation): time 0.01646/2.103, allocations: 6.274 MB / 1.232 GB, free: 105.7 MB / 0.5887 GB Notification: Performance of pre-optimization done (n=995): time 5.198e-05/2.103, allocations: 1.656 kB / 1.232 GB, free: 105.7 MB / 0.5887 GB Notification: Performance of matching and sorting (n=1129): time 0.573/2.676, allocations: 130.4 MB / 1.359 GB, free: 187 MB / 0.5887 GB Notification: Performance of inlineWhenForInitialization (initialization): time 0.0001691/2.676, allocations: 170.4 kB / 1.359 GB, free: 186.9 MB / 0.5887 GB Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.01331/2.69, allocations: 9.749 MB / 1.369 GB, free: 183 MB / 0.5887 GB Notification: Performance of collectPreVariables (initialization): time 0.004282/2.694, allocations: 219.2 kB / 1.369 GB, free: 182.9 MB / 0.5887 GB Notification: Performance of collectInitialEqns (initialization): time 0.00381/2.698, allocations: 7.055 MB / 1.376 GB, free: 178 MB / 0.5887 GB Notification: Performance of collectInitialBindings (initialization): time 0.006386/2.704, allocations: 4.048 MB / 1.38 GB, free: 174.6 MB / 0.5887 GB Notification: Performance of simplifyInitialFunctions (initialization): time 0.009768/2.714, allocations: 3.253 MB / 1.383 GB, free: 172.8 MB / 0.5887 GB Notification: Performance of setup shared object (initialization): time 3.433e-05/2.714, allocations: 301.1 kB / 1.383 GB, free: 172.5 MB / 0.5887 GB Notification: Performance of preBalanceInitialSystem (initialization): time 0.01473/2.729, allocations: 11.84 MB / 1.395 GB, free: 166 MB / 0.5887 GB Notification: Performance of partitionIndependentBlocks (initialization): time 0.01858/2.747, allocations: 16.58 MB / 1.411 GB, free: 153.4 MB / 0.5887 GB Notification: Performance of analyzeInitialSystem (initialization): time 0.03522/2.783, allocations: 29.76 MB / 1.44 GB, free: 128.6 MB / 0.5887 GB Notification: Performance of solveInitialSystemEqSystem (initialization): time 0.0001513/2.783, allocations: 44 kB / 1.44 GB, free: 128.6 MB / 0.5887 GB Notification: Performance of matching and sorting (n=1889) (initialization): time 0.2306/3.013, allocations: 81.37 MB / 1.52 GB, free: 47.08 MB / 0.5887 GB Notification: Performance of prepare postOptimizeDAE: time 9.322e-05/3.013, allocations: 73.61 kB / 1.52 GB, free: 47.01 MB / 0.5887 GB Notification: Performance of postOpt simplifyComplexFunction (initialization): time 0.0001553/3.014, allocations: 153.2 kB / 1.52 GB, free: 46.86 MB / 0.5887 GB Notification: Performance of postOpt tearingSystem (initialization): time 0.03214/3.046, allocations: 22.39 MB / 1.542 GB, free: 24.63 MB / 0.5887 GB Notification: Performance of postOpt solveSimpleEquations (initialization): time 0.01048/3.056, allocations: 3.729 MB / 1.545 GB, free: 20.9 MB / 0.5887 GB Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 0.3356/3.392, allocations: 92.35 MB / 1.636 GB, free: 150.5 MB / 0.5887 GB Notification: Performance of postOpt simplifyAllExpressions (initialization): time 0.01239/3.404, allocations: 0.8305 MB / 1.636 GB, free: 150 MB / 0.5887 GB Notification: Performance of postOpt collapseArrayExpressions (initialization): time 0.003739/3.408, allocations: 0.9303 MB / 1.637 GB, free: 149.7 MB / 0.5887 GB Notification: Model statistics after passing the back-end for initialization: * Number of independent subsystems: 677 * Number of states: 0 () * Number of discrete variables: 0 () * Number of discrete states: 0 () * Number of clocked states: 0 () * Top-level inputs: 0 Notification: Strong component statistics for initialization (1841): * Single equations (assignments): 1838 * Array equations: 0 * Algorithm blocks: 0 * Record equations: 0 * When equations: 0 * If-equations: 0 * Equation systems (not torn): 0 * Torn equation systems: 3 * Mixed (continuous/discrete) equation systems: 0 Notification: Torn system details for strict tearing set: * Linear torn systems (#iteration vars, #inner vars, density): 2 systems {(1,3,100.0%), (33,10,82.4%)} * Non-linear torn systems (#iteration vars, #inner vars): 1 system {(1,3)} Notification: Performance of prepare postOptimizeDAE: time 0.01186/3.42, allocations: 5.378 MB / 1.643 GB, free: 146.7 MB / 0.5887 GB Notification: Performance of postOpt lateInlineFunction (simulation): time 0.003706/3.424, allocations: 1.059 MB / 1.644 GB, free: 146.7 MB / 0.5887 GB Notification: Performance of postOpt wrapFunctionCalls (simulation): time 0.1364/3.56, allocations: 48.43 MB / 1.691 GB, free: 102 MB / 0.5887 GB Notification: Performance of postOpt inlineArrayEqn (simulation): time 9.781e-05/3.56, allocations: 123.9 kB / 1.691 GB, free: 101.9 MB / 0.5887 GB Notification: Performance of postOpt constantLinearSystem (simulation): time 4.583e-05/3.56, allocations: 17.94 kB / 1.691 GB, free: 101.9 MB / 0.5887 GB Notification: Performance of postOpt simplifysemiLinear (simulation): time 0.0003493/3.56, allocations: 59.77 kB / 1.691 GB, free: 101.8 MB / 0.5887 GB Notification: Performance of postOpt removeSimpleEquations (simulation): time 0.1733/3.734, allocations: 68.85 MB / 1.758 GB, free: 33.51 MB / 0.5887 GB Notification: Performance of postOpt simplifyComplexFunction (simulation): time 0.0001029/3.734, allocations: 4 kB / 1.758 GB, free: 33.51 MB / 0.5887 GB Notification: Performance of postOpt solveSimpleEquations (simulation): time 0.008857/3.743, allocations: 2.419 MB / 1.761 GB, free: 31.09 MB / 0.5887 GB Notification: Performance of postOpt tearingSystem (simulation): time 0.01775/3.76, allocations: 11.88 MB / 1.772 GB, free: 19.38 MB / 0.5887 GB Notification: Performance of postOpt inputDerivativesUsed (simulation): time 0.003813/3.764, allocations: 480.8 kB / 1.773 GB, free: 18.91 MB / 0.5887 GB Notification: Performance of postOpt calculateStrongComponentJacobians (simulation): time 0.2754/4.04, allocations: 45.71 MB / 1.817 GB, free: 169.9 MB / 0.5887 GB Notification: Performance of postOpt calculateStateSetsJacobians (simulation): time 3.176e-06/4.04, allocations: 8.656 kB / 1.817 GB, free: 169.9 MB / 0.5887 GB Notification: Performance of postOpt symbolicJacobian (simulation): time 0.154/4.194, allocations: 62.6 MB / 1.878 GB, free: 141.5 MB / 0.5887 GB Notification: Performance of postOpt removeConstants (simulation): time 0.008801/4.202, allocations: 3.381 MB / 1.882 GB, free: 138.6 MB / 0.5887 GB Notification: Performance of postOpt simplifyTimeIndepFuncCalls (simulation): time 0.004055/4.207, allocations: 298.6 kB / 1.882 GB, free: 138.3 MB / 0.5887 GB Notification: Performance of postOpt simplifyAllExpressions (simulation): time 0.008734/4.215, allocations: 0.5111 MB / 1.883 GB, free: 137.8 MB / 0.5887 GB Notification: Performance of postOpt findZeroCrossings (simulation): time 0.004352/4.22, allocations: 1.557 MB / 1.884 GB, free: 136.2 MB / 0.5887 GB Notification: Performance of postOpt collapseArrayExpressions (simulation): time 0.00155/4.221, allocations: 467.6 kB / 1.885 GB, free: 135.7 MB / 0.5887 GB Notification: Performance of sorting global known variables: time 0.007605/4.229, allocations: 6.492 MB / 1.891 GB, free: 129.3 MB / 0.5887 GB Notification: Performance of sort global known variables: time 2.61e-07/4.229, allocations: 0 / 1.891 GB, free: 129.3 MB / 0.5887 GB Notification: Performance of remove unused functions: time 0.02497/4.254, allocations: 6.715 MB / 1.897 GB, free: 123 MB / 0.5887 GB Notification: Model statistics after passing the back-end for simulation: * Number of independent subsystems: 15 * Number of states: 60 (solution.temperature,O2_free.logn,H2O.logn,relaxed.OxyHm[1].logn,relaxed.OxyHm[2].logn,relaxed.OxyHm[3].logn,relaxed.OxyHm[4].logn,relaxed.DeoxyHm[1].logn,relaxed.DeoxyHm[2].logn,relaxed.DeoxyHm[3].logn,relaxed.DeoxyHm[4].logn,relaxed.HmAH[1].logn,relaxed.HmAH[2].logn,relaxed.HmAH[3].logn,relaxed.HmAH[4].logn,relaxed.HmA[1].logn,relaxed.HmA[2].logn,relaxed.HmA[3].logn,relaxed.HmA[4].logn,relaxed.HmNH3[1].logn,relaxed.HmNH3[2].logn,relaxed.HmNH3[3].logn,relaxed.HmNH3[4].logn,relaxed.HmNH2[1].logn,relaxed.HmNH2[2].logn,relaxed.HmNH2[3].logn,relaxed.HmNH2[4].logn,relaxed.HmNHCOO[1].logn,relaxed.HmNHCOO[2].logn,relaxed.HmNHCOO[3].logn,relaxed.HmNHCOO[4].logn,tensed.OxyHm[1].logn,tensed.OxyHm[2].logn,tensed.OxyHm[3].logn,tensed.OxyHm[4].logn,tensed.DeoxyHm[1].logn,tensed.DeoxyHm[2].logn,tensed.DeoxyHm[3].logn,tensed.DeoxyHm[4].logn,tensed.HmAH[1].logn,tensed.HmAH[2].logn,tensed.HmAH[3].logn,tensed.HmAH[4].logn,tensed.HmA[1].logn,tensed.HmA[2].logn,tensed.HmA[3].logn,tensed.HmA[4].logn,tensed.HmNH3[1].logn,tensed.HmNH3[2].logn,tensed.HmNH3[3].logn,tensed.HmNH3[4].logn,tensed.HmNH2[1].logn,tensed.HmNH2[2].logn,tensed.HmNH2[3].logn,tensed.HmNH2[4].logn,tensed.HmNHCOO[1].logn,tensed.HmNHCOO[2].logn,tensed.HmNHCOO[3].logn,tensed.HmNHCOO[4].logn,CO2_free.logn) * Number of discrete variables: 0 () * Number of discrete states: 0 () * Number of clocked states: 0 () * Top-level inputs: 0 Notification: Strong component statistics for simulation (1234): * Single equations (assignments): 1231 * Array equations: 0 * Algorithm blocks: 0 * Record equations: 0 * When equations: 0 * If-equations: 0 * Equation systems (not torn): 0 * Torn equation systems: 3 * Mixed (continuous/discrete) equation systems: 0 Notification: Torn system details for strict tearing set: * Linear torn systems (#iteration vars, #inner vars, density): 2 systems {(1,3,100.0%), (33,10,82.4%)} * Non-linear torn systems (#iteration vars, #inner vars): 1 system {(1,3)} Notification: Performance of Backend phase and start with SimCode phase: time 0.008123/4.262, allocations: 3.765 MB / 1.901 GB, free: 119.8 MB / 0.5887 GB Notification: Performance of simCode: created initialization part: time 0.04138/4.303, allocations: 26.37 MB / 1.927 GB, free: 93.47 MB / 0.5887 GB Notification: Performance of simCode: created event and clocks part: time 6.582e-06/4.303, allocations: 4 kB / 1.927 GB, free: 93.46 MB / 0.5887 GB Notification: Performance of simCode: created simulation system equations: time 0.02384/4.327, allocations: 13.59 MB / 1.94 GB, free: 79.84 MB / 0.5887 GB Notification: Performance of simCode: created of all other equations (e.g. parameter, nominal, assert, etc): time 0.01464/4.342, allocations: 2.449 MB / 1.943 GB, free: 77.64 MB / 0.5887 GB Notification: Performance of simCode: created linear, non-linear and system jacobian parts: time 0.05624/4.398, allocations: 37.68 MB / 1.979 GB, free: 39.9 MB / 0.5887 GB Notification: Performance of simCode: some other stuff during SimCode phase: time 0.007748/4.406, allocations: 9.329 MB / 1.988 GB, free: 30.7 MB / 0.5887 GB Notification: Performance of simCode: all other stuff during SimCode phase: time 0.005555/4.411, allocations: 1.535 MB / 1.99 GB, free: 29.17 MB / 0.5887 GB Notification: Performance of SimCode: time 1.283e-06/4.411, allocations: 4 kB / 1.99 GB, free: 29.17 MB / 0.5887 GB Notification: Performance of Templates: time 1.042/5.453, allocations: 0.5198 GB / 2.51 GB, free: 149.7 MB / 0.5887 GB " [Timeout remaining time 655] make -j1 -f Chemical_Chemical.Obsolete.Examples.Hemoglobin.HemoglobinMultipleAllostery.makefile [Timeout 660] (rm -f Chemical_Chemical.Obsolete.Examples.Hemoglobin.HemoglobinMultipleAllostery.pipe ; mkfifo Chemical_Chemical.Obsolete.Examples.Hemoglobin.HemoglobinMultipleAllostery.pipe ; head -c 1048576 < Chemical_Chemical.Obsolete.Examples.Hemoglobin.HemoglobinMultipleAllostery.pipe >> ../files/Chemical_Chemical.Obsolete.Examples.Hemoglobin.HemoglobinMultipleAllostery.sim & ./Chemical_Chemical.Obsolete.Examples.Hemoglobin.HemoglobinMultipleAllostery -abortSlowSimulation -alarm=480 -lv LOG_STATS > Chemical_Chemical.Obsolete.Examples.Hemoglobin.HemoglobinMultipleAllostery.pipe 2>&1) [Timeout 480] [Calling sys.exit(0), Time elapsed: 23.809263265691698] Failed to read output from testmodel.py, exit status != 0: 5.460402087308466 5.467240157 4.701093724 Calling exit ...