Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr Bodylight_Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.conf.json
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo): time 0.000955/0.000955, allocations: 88.52 kB / 19.93 MB, free: 4.605 MB / 18.57 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo): time 0.0009747/0.0009747, allocations: 173.9 kB / 23.21 MB, free: 1.328 MB / 18.57 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo): time 0.9883/0.9883, allocations: 177.1 MB / 203.5 MB, free: 5.742 MB / 186.7 MB
"
[Timeout remaining time 179]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/package.mo): time 0.05875/0.05875, allocations: 12.73 MB / 272.7 MB, free: 0.4922 MB / 250.7 MB
"
[Timeout remaining time 180]
Using package Bodylight with version 1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/package.mo)
Using package Modelica with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo)
Using package Complex with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo)
Using package ModelicaServices with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo)
Running command: translateModel(Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC,tolerance=1e-14,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Bodylight_Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC")
translateModel(Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC,tolerance=1e-14,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Bodylight_Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC") [Timeout 660]
"Notification: Performance of FrontEnd - loaded program: time 1.683e-06/1.683e-06, allocations: 0 / 403.1 MB, free: 8.859 MB / 330.7 MB
Notification: Performance of FrontEnd - Absyn->SCode: time 2.671e-05/2.839e-05, allocations: 8.75 kB / 403.1 MB, free: 8.852 MB / 330.7 MB
Notification: Performance of NFInst.instantiate(Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC): time 0.006304/0.006333, allocations: 5.268 MB / 408.4 MB, free: 3.559 MB / 330.7 MB
Notification: Performance of NFInst.instExpressions: time 0.1609/0.1673, allocations: 5.583 MB / 414 MB, free: 14.48 MB / 330.7 MB
Notification: Performance of NFInst.updateImplicitVariability: time 0.0005746/0.1678, allocations: 45.44 kB / 414 MB, free: 14.48 MB / 330.7 MB
Notification: Performance of NFTyping.typeComponents: time 0.000364/0.1682, allocations: 188.4 kB / 414.2 MB, free: 14.48 MB / 330.7 MB
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.OxyRHm.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.OxyRHm.Utilities.readReal' contains a call to impure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.OxyRHm.Utilities.UnitConversions.findUnit'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.DeoxyRHm.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.DeoxyRHm.Utilities.readReal' contains a call to impure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.DeoxyRHm.Utilities.UnitConversions.findUnit'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.OxyTHm.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.OxyTHm.Utilities.readReal' contains a call to impure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.OxyTHm.Utilities.UnitConversions.findUnit'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.DeoxyTHm.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.DeoxyTHm.Utilities.readReal' contains a call to impure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.DeoxyTHm.Utilities.UnitConversions.findUnit'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.oxygen_unbound.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.oxygen_unbound.Utilities.readReal' contains a call to impure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.oxygen_unbound.Utilities.UnitConversions.findUnit'.
Notification: Performance of NFTyping.typeBindings: time 0.002404/0.1706, allocations: 1.02 MB / 415.2 MB, free: 14.32 MB / 330.7 MB
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.OxyRHm.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.OxyRHm.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.DeoxyRHm.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.DeoxyRHm.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.OxyTHm.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.OxyTHm.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.DeoxyTHm.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.DeoxyTHm.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.oxygen_unbound.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.oxygen_unbound.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
Notification: Performance of NFTyping.typeClassSections: time 0.00197/0.1726, allocations: 1.029 MB / 416.2 MB, free: 14.2 MB / 330.7 MB
Notification: Performance of NFFlatten.flatten: time 0.002239/0.1748, allocations: 3.244 MB / 419.5 MB, free: 13.05 MB / 330.7 MB
Notification: Performance of NFFlatten.resolveConnections: time 0.0006332/0.1754, allocations: 0.5644 MB / 420.1 MB, free: 12.79 MB / 330.7 MB
Notification: Performance of NFEvalConstants.evaluate: time 0.001463/0.1769, allocations: 1.638 MB / 421.7 MB, free: 12.28 MB / 330.7 MB
Notification: Performance of NFSimplifyModel.simplify: time 0.001574/0.1785, allocations: 1.445 MB / 423.1 MB, free: 11.89 MB / 330.7 MB
Notification: Performance of NFPackage.collectConstants: time 0.0003826/0.1789, allocations: 169 kB / 423.3 MB, free: 11.89 MB / 330.7 MB
Notification: Performance of NFFlatten.collectFunctions: time 0.0004548/0.1793, allocations: 185.8 kB / 423.5 MB, free: 11.89 MB / 330.7 MB
Notification: Performance of NFScalarize.scalarize: time 0.0005538/0.1799, allocations: 0.6727 MB / 424.2 MB, free: 11.58 MB / 330.7 MB
Notification: Performance of NFVerifyModel.verify: time 0.0009567/0.1808, allocations: 0.8634 MB / 425 MB, free: 11.28 MB / 330.7 MB
Notification: Performance of NFConvertDAE.convert: time 0.002415/0.1832, allocations: 3.221 MB / 428.2 MB, free: 10.38 MB / 330.7 MB
Notification: Performance of FrontEnd - DAE generated: time 4.588e-06/0.1832, allocations: 0 / 428.2 MB, free: 10.38 MB / 330.7 MB
Notification: Performance of FrontEnd: time 1.974e-06/0.1832, allocations: 0.9688 kB / 428.2 MB, free: 10.38 MB / 330.7 MB
Notification: Performance of Transformations before backend: time 3.648e-05/0.1833, allocations: 0 / 428.2 MB, free: 10.38 MB / 330.7 MB
Notification: Model statistics after passing the front-end and creating the data structures used by the back-end:
 * Number of equations: 387
 * Number of variables: 387
Notification: Performance of Generate backend data structure: time 0.004183/0.1875, allocations: 3.466 MB / 431.7 MB, free: 8.262 MB / 330.7 MB
Notification: Performance of prepare preOptimizeDAE: time 5.344e-05/0.1875, allocations: 14.08 kB / 431.7 MB, free: 8.258 MB / 330.7 MB
Notification: Performance of preOpt normalInlineFunction (simulation): time 0.0006967/0.1882, allocations: 394.7 kB / 432.1 MB, free: 8.059 MB / 330.7 MB
Notification: Performance of preOpt evaluateParameters (simulation): time 0.002271/0.1905, allocations: 1.783 MB / 433.9 MB, free: 7.035 MB / 330.7 MB
Notification: Performance of preOpt simplifyIfEquations (simulation): time 7.23e-05/0.1906, allocations: 126.2 kB / 434 MB, free: 6.977 MB / 330.7 MB
Notification: Performance of preOpt expandDerOperator (simulation): time 0.0001935/0.1908, allocations: 159.6 kB / 434.2 MB, free: 6.926 MB / 330.7 MB
Notification: Performance of preOpt clockPartitioning (simulation): time 0.002326/0.1931, allocations: 2.216 MB / 436.4 MB, free: 5.652 MB / 330.7 MB
Notification: Performance of preOpt findStateOrder (simulation): time 2.572e-05/0.1931, allocations: 2.406 kB / 436.4 MB, free: 5.652 MB / 330.7 MB
Notification: Performance of preOpt replaceEdgeChange (simulation): time 9.963e-05/0.1932, allocations: 60.09 kB / 436.4 MB, free: 5.605 MB / 330.7 MB
Notification: Performance of preOpt inlineArrayEqn (simulation): time 4.925e-05/0.1933, allocations: 71.5 kB / 436.5 MB, free: 5.59 MB / 330.7 MB
Notification: Performance of preOpt removeEqualRHS (simulation): time 0.002029/0.1953, allocations: 2.013 MB / 438.5 MB, free: 4.57 MB / 330.7 MB
Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.006808/0.2021, allocations: 6.606 MB / 445.1 MB, free: 13.89 MB / 346.7 MB
Notification: Performance of preOpt comSubExp (simulation): time 0.001511/0.2036, allocations: 1.55 MB / 446.7 MB, free: 12.27 MB / 346.7 MB
Notification: Performance of preOpt resolveLoops (simulation): time 0.0009795/0.2046, allocations: 0.9235 MB / 447.6 MB, free: 11.32 MB / 346.7 MB
Notification: Performance of preOpt evalFunc (simulation): time 6.406e-05/0.2046, allocations: 20.94 kB / 447.6 MB, free: 11.3 MB / 346.7 MB
Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 3.018e-05/0.2047, allocations: 59.48 kB / 447.7 MB, free: 11.23 MB / 346.7 MB
Notification: Performance of pre-optimization done (n=118): time 2.846e-06/0.2047, allocations: 0 / 447.7 MB, free: 11.23 MB / 346.7 MB
Notification: Performance of matching and sorting (n=183): time 0.05157/0.2562, allocations: 28.78 MB / 476.5 MB, free: 14.41 MB / 378.7 MB
Notification: Performance of inlineWhenForInitialization (initialization): time 9.913e-05/0.2563, allocations: 265.2 kB / 476.7 MB, free: 14.09 MB / 378.7 MB
Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.002369/0.2587, allocations: 2.344 MB / 479.1 MB, free: 11.72 MB / 378.7 MB
Notification: Performance of collectPreVariables (initialization): time 0.0001342/0.2588, allocations: 61.7 kB / 479.1 MB, free: 11.66 MB / 378.7 MB
Notification: Performance of collectInitialEqns (initialization): time 0.000587/0.2594, allocations: 1.092 MB / 480.2 MB, free: 10.56 MB / 378.7 MB
Notification: Performance of collectInitialBindings (initialization): time 0.0006925/0.2601, allocations: 0.6479 MB / 480.9 MB, free: 9.926 MB / 378.7 MB
Notification: Performance of simplifyInitialFunctions (initialization): time 0.0005068/0.2606, allocations: 448.3 kB / 481.3 MB, free: 9.48 MB / 378.7 MB
Notification: Performance of setup shared object (initialization): time 6.707e-05/0.2607, allocations: 309.1 kB / 481.6 MB, free: 9.176 MB / 378.7 MB
Notification: Performance of preBalanceInitialSystem (initialization): time 0.001714/0.2624, allocations: 1.729 MB / 483.3 MB, free: 7.441 MB / 378.7 MB
Notification: Performance of partitionIndependentBlocks (initialization): time 0.001929/0.2643, allocations: 2.382 MB / 485.7 MB, free: 4.773 MB / 378.7 MB
Notification: Performance of analyzeInitialSystem (initialization): time 0.003971/0.2683, allocations: 4.267 MB / 490 MB, free: 240 kB / 378.7 MB
Notification: Performance of solveInitialSystemEqSystem (initialization): time 9.218e-06/0.2683, allocations: 4 kB / 490 MB, free: 236 kB / 378.7 MB
Notification: Performance of matching and sorting (n=291) (initialization): time 0.01257/0.2809, allocations: 8.603 MB / 498.6 MB, free: 7.605 MB / 394.7 MB
Notification: Performance of prepare postOptimizeDAE: time 2.686e-05/0.2809, allocations: 12 kB / 498.6 MB, free: 7.594 MB / 394.7 MB
Notification: Performance of postOpt simplifyComplexFunction (initialization): time 2.583e-05/0.2809, allocations: 20 kB / 498.6 MB, free: 7.574 MB / 394.7 MB
Notification: Performance of postOpt tearingSystem (initialization): time 0.009414/0.2904, allocations: 5.254 MB / 0.4921 GB, free: 2.32 MB / 394.7 MB
Notification: Performance of postOpt solveSimpleEquations (initialization): time 0.0009471/0.2913, allocations: 451.3 kB / 0.4925 GB, free: 1.879 MB / 394.7 MB
Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 0.02647/0.3178, allocations: 24.71 MB / 0.5166 GB, free: 8.973 MB / 426.7 MB
Notification: Performance of postOpt simplifyAllExpressions (initialization): time 0.001682/0.3195, allocations: 259.5 kB / 0.5169 GB, free: 8.719 MB / 426.7 MB
Notification: Performance of postOpt collapseArrayExpressions (initialization): time 0.0001344/0.3196, allocations: 91.98 kB / 0.517 GB, free: 8.629 MB / 426.7 MB
Notification: Model statistics after passing the back-end for initialization:
 * Number of independent subsystems: 89
 * Number of states: 0 ()
 * Number of discrete variables: 0 ()
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for initialization (205):
 * Single equations (assignments): 203
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 0
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 2
 * Mixed (continuous/discrete) equation systems: 0
Notification: Torn system details for strict tearing set:
 * Linear torn systems (#iteration vars, #inner vars, density): 1 system
   {(8,36,34.4%)}
 * Non-linear torn systems (#iteration vars, #inner vars): 1 system
   {(10,34)}
Notification: Performance of prepare postOptimizeDAE: time 0.001188/0.3208, allocations: 0.8637 MB / 0.5178 GB, free: 7.754 MB / 426.7 MB
Notification: Performance of postOpt lateInlineFunction (simulation): time 0.000311/0.3211, allocations: 250.4 kB / 0.518 GB, free: 7.508 MB / 426.7 MB
Notification: Performance of postOpt wrapFunctionCalls (simulation): time 0.0006774/0.3218, allocations: 424.6 kB / 0.5185 GB, free: 7.086 MB / 426.7 MB
Notification: Performance of postOpt inlineArrayEqn (simulation): time 9.628e-06/0.3218, allocations: 20 kB / 0.5185 GB, free: 7.066 MB / 426.7 MB
Notification: Performance of postOpt constantLinearSystem (simulation): time 2.595e-05/0.3218, allocations: 8 kB / 0.5185 GB, free: 7.059 MB / 426.7 MB
Notification: Performance of postOpt simplifysemiLinear (simulation): time 1.199e-05/0.3218, allocations: 19.84 kB / 0.5185 GB, free: 7.039 MB / 426.7 MB
Notification: Performance of postOpt removeSimpleEquations (simulation): time 0.01615/0.338, allocations: 11.71 MB / 0.5299 GB, free: 11.09 MB / 442.7 MB
Notification: Performance of postOpt simplifyComplexFunction (simulation): time 1.307e-05/0.338, allocations: 16 kB / 0.53 GB, free: 11.07 MB / 442.7 MB
Notification: Performance of postOpt solveSimpleEquations (simulation): time 0.0004282/0.3384, allocations: 235.6 kB / 0.5302 GB, free: 10.84 MB / 442.7 MB
Notification: Performance of postOpt tearingSystem (simulation): time 0.0111/0.3495, allocations: 4.994 MB / 0.5351 GB, free: 5.836 MB / 442.7 MB
Notification: Performance of postOpt inputDerivativesUsed (simulation): time 0.0001779/0.3497, allocations: 52 kB / 0.5351 GB, free: 5.785 MB / 442.7 MB
Notification: Performance of postOpt calculateStrongComponentJacobians (simulation): time 0.02482/0.3745, allocations: 23.71 MB / 0.5583 GB, free: 13.84 MB / 474.7 MB
Notification: Performance of postOpt calculateStateSetsJacobians (simulation): time 1.234e-05/0.3745, allocations: 27.88 kB / 0.5583 GB, free: 13.82 MB / 474.7 MB
Notification: Performance of postOpt symbolicJacobian (simulation): time 0.01361/0.3881, allocations: 10.76 MB / 0.5688 GB, free: 2.816 MB / 474.7 MB
Notification: Performance of postOpt removeConstants (simulation): time 0.001429/0.3896, allocations: 0.6212 MB / 0.5694 GB, free: 2.195 MB / 474.7 MB
Notification: Performance of postOpt simplifyTimeIndepFuncCalls (simulation): time 0.0002291/0.3898, allocations: 59.92 kB / 0.5695 GB, free: 2.137 MB / 474.7 MB
Notification: Performance of postOpt simplifyAllExpressions (simulation): time 0.001069/0.3909, allocations: 223.6 kB / 0.5697 GB, free: 1.918 MB / 474.7 MB
Notification: Performance of postOpt findZeroCrossings (simulation): time 0.0005449/0.3914, allocations: 260.1 kB / 0.5699 GB, free: 1.664 MB / 474.7 MB
Notification: Performance of postOpt collapseArrayExpressions (simulation): time 9.033e-05/0.3915, allocations: 68 kB / 0.57 GB, free: 1.598 MB / 474.7 MB
Notification: Performance of sorting global known variables: time 0.001595/0.3931, allocations: 1.575 MB / 0.5715 GB, free: 8 kB / 474.7 MB
Notification: Performance of sort global known variables: time 1.9e-07/0.3931, allocations: 0 / 0.5715 GB, free: 8 kB / 474.7 MB
Notification: Performance of remove unused functions: time 0.002406/0.3955, allocations: 1.008 MB / 0.5725 GB, free: 15 MB / 490.7 MB
Notification: Model statistics after passing the back-end for simulation:
 * Number of independent subsystems: 72
 * Number of states: 7 (totalHb.state[1],T0_in_T.state[3],T0_in_T.state[2],T0_in_T.state[1],R0_in_R.state[3],R0_in_R.state[2],R0_in_R.state[1])
 * Number of discrete variables: 0 ()
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for simulation (111):
 * Single equations (assignments): 109
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 0
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 2
 * Mixed (continuous/discrete) equation systems: 0
Notification: Torn system details for strict tearing set:
 * Linear torn systems (#iteration vars, #inner vars, density): 1 system
   {(8,36,34.4%)}
 * Non-linear torn systems (#iteration vars, #inner vars): 1 system
   {(10,34)}
Notification: Performance of Backend phase and start with SimCode phase: time 0.0002411/0.3957, allocations: 170.8 kB / 0.5727 GB, free: 14.82 MB / 490.7 MB
Notification: Performance of simCode: created initialization part: time 0.006814/0.4025, allocations: 5.337 MB / 0.5779 GB, free: 9.453 MB / 490.7 MB
Notification: Performance of simCode: created event and clocks part: time 7.664e-06/0.4026, allocations: 3.938 kB / 0.5779 GB, free: 9.449 MB / 490.7 MB
Notification: Performance of simCode: created simulation system equations: time 0.004533/0.4071, allocations: 3.273 MB / 0.5811 GB, free: 6.152 MB / 490.7 MB
Notification: Performance of simCode: created of all other equations (e.g. parameter, nominal, assert, etc): time 0.002395/0.4095, allocations: 0.5613 MB / 0.5816 GB, free: 5.602 MB / 490.7 MB
Notification: Performance of simCode: created linear, non-linear and system jacobian parts: time 0.1627/0.5722, allocations: 6.222 MB / 0.5877 GB, free: 163.2 MB / 490.7 MB
Notification: Performance of simCode: some other stuff during SimCode phase: time 0.001204/0.5734, allocations: 1.525 MB / 0.5892 GB, free: 163 MB / 490.7 MB
Notification: Performance of simCode: all other stuff during SimCode phase: time 0.0004835/0.5738, allocations: 140.2 kB / 0.5893 GB, free: 163 MB / 490.7 MB
Notification: Performance of SimCode: time 1.262e-06/0.5738, allocations: 0 / 0.5893 GB, free: 163 MB / 490.7 MB
Notification: Performance of Templates: time 0.03895/0.6128, allocations: 63.62 MB / 0.6515 GB, free: 119.2 MB / 490.7 MB
"
[Timeout remaining time 659]
make -j1 -f Bodylight_Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.makefile [Timeout 660]
(rm -f Bodylight_Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.pipe ; mkfifo Bodylight_Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.pipe ; head -c 1048576 < Bodylight_Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.pipe >> ../files/Bodylight_Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.sim & ./Bodylight_Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC > Bodylight_Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.pipe 2>&1) [Timeout 240]
[Calling sys.exit(0), Time elapsed: 6.9358305390924215]