Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr Pharmacolibrary_Pharmacolibrary.Examples.PK_Caffeine.PK_population_Caffeine.conf.json
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo): time 0.001859/0.001859, allocations: 105.5 kB / 18.95 MB, free: 1.176 MB / 13.93 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo): time 0.002049/0.002049, allocations: 215.3 kB / 22.25 MB, free: 3.566 MB / 13.93 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo): time 1.758/1.758, allocations: 230.6 MB / 256 MB, free: 9.605 MB / 202.7 MB
"
[Timeout remaining time 178]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/package.mo", uses=false) [Timeout 180]
"[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/Examples/package.order:0:0-0:0:readonly] Warning: The package.order file does not list all .mo files and directories (containing package.mo) present in its directory.
Missing names are:
	Paracetamol_Experiment
Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/package.mo): time 3.77/3.77, allocations: 335.3 MB / 0.6325 GB, free: 7.23 MB / 442.7 MB
"
[Timeout remaining time 176]
Using package Pharmacolibrary with version 25.09 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/package.mo)
Using package Modelica with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo)
Using package Complex with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo)
Using package ModelicaServices with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo)
Running command: translateModel(Pharmacolibrary.Examples.PK_Caffeine.PK_population_Caffeine,tolerance=1e-06,outputFormat="empty",numberOfIntervals=499,variableFilter="",fileNamePrefix="Pharmacolibrary_Pharmacolibrary.Examples.PK_Caffeine.PK_population_Caffeine")
translateModel(Pharmacolibrary.Examples.PK_Caffeine.PK_population_Caffeine,tolerance=1e-06,outputFormat="empty",numberOfIntervals=499,variableFilter="",fileNamePrefix="Pharmacolibrary_Pharmacolibrary.Examples.PK_Caffeine.PK_population_Caffeine") [Timeout 660]
"Notification: Pharmacolibrary requested package Modelica of version 4.0.0. Modelica 4.1.0 is used instead which states that it is fully compatible without conversion script needed.
Notification: Performance of FrontEnd - loaded program: time 0.00392/0.00392, allocations: 75.88 kB / 0.868 GB, free: 5.785 MB / 0.573 GB
Notification: Performance of FrontEnd - Absyn->SCode: time 0.2848/0.2887, allocations: 112.8 MB / 0.9782 GB, free: 4.703 MB / 0.6824 GB
Notification: Performance of NFInst.instantiate(Pharmacolibrary.Examples.PK_Caffeine.PK_population_Caffeine): time 0.008931/0.2977, allocations: 6.227 MB / 0.9843 GB, free: 14.45 MB / 0.698 GB
Notification: Performance of NFInst.instExpressions: time 0.002726/0.3004, allocations: 1.287 MB / 0.9855 GB, free: 13.16 MB / 0.698 GB
Notification: Performance of NFInst.updateImplicitVariability: time 0.0003255/0.3007, allocations: 7.938 kB / 0.9855 GB, free: 13.15 MB / 0.698 GB
Notification: Performance of NFTyping.typeComponents: time 0.0003079/0.301, allocations: 106.8 kB / 0.9857 GB, free: 13.04 MB / 0.698 GB
Notification: Performance of NFTyping.typeBindings: time 0.0007044/0.3017, allocations: 333.3 kB / 0.986 GB, free: 12.71 MB / 0.698 GB
Notification: Performance of NFTyping.typeClassSections: time 0.0006674/0.3024, allocations: 279.7 kB / 0.9862 GB, free: 12.44 MB / 0.698 GB
Notification: Performance of NFFlatten.flatten: time 0.4407/0.7431, allocations: 1.183 MB / 0.9874 GB, free: 20.3 MB / 0.698 GB
Notification: Performance of NFFlatten.resolveConnections: time 0.0004512/0.7435, allocations: 168.5 kB / 0.9876 GB, free: 20.26 MB / 0.698 GB
Notification: Performance of NFEvalConstants.evaluate: time 0.0007143/0.7442, allocations: 420.9 kB / 0.988 GB, free: 20.25 MB / 0.698 GB
Notification: Performance of NFSimplifyModel.simplify: time 0.0005462/0.7448, allocations: 411.5 kB / 0.9883 GB, free: 20.16 MB / 0.698 GB
Notification: Performance of NFPackage.collectConstants: time 0.0001333/0.7449, allocations: 110.6 kB / 0.9885 GB, free: 20.16 MB / 0.698 GB
Notification: Performance of NFFlatten.collectFunctions: time 0.0001678/0.7451, allocations: 109.4 kB / 0.9886 GB, free: 20.16 MB / 0.698 GB
Notification: Performance of NFScalarize.scalarize: time 0.0001322/0.7452, allocations: 195.1 kB / 0.9887 GB, free: 20.13 MB / 0.698 GB
Notification: Performance of NFVerifyModel.verify: time 0.0003296/0.7456, allocations: 421.2 kB / 0.9891 GB, free: 20.04 MB / 0.698 GB
Notification: Performance of NFConvertDAE.convert: time 0.0009057/0.7465, allocations: 1.154 MB / 0.9903 GB, free: 19.88 MB / 0.698 GB
Notification: Performance of FrontEnd - DAE generated: time 4.468e-06/0.7465, allocations: 0 / 0.9903 GB, free: 19.88 MB / 0.698 GB
Notification: Performance of FrontEnd: time 1.804e-06/0.7465, allocations: 0.5312 kB / 0.9903 GB, free: 19.88 MB / 0.698 GB
Notification: Performance of Transformations before backend: time 1.269e-05/0.7465, allocations: 0.625 kB / 0.9903 GB, free: 19.88 MB / 0.698 GB
Notification: Model statistics after passing the front-end and creating the data structures used by the back-end:
 * Number of equations: 146
 * Number of variables: 146
Notification: Performance of Generate backend data structure: time 0.002022/0.7485, allocations: 1.346 MB / 0.9916 GB, free: 19.01 MB / 0.698 GB
Notification: Performance of prepare preOptimizeDAE: time 3.762e-05/0.7485, allocations: 11.58 kB / 0.9916 GB, free: 19.01 MB / 0.698 GB
Notification: Performance of preOpt normalInlineFunction (simulation): time 0.0001505/0.7487, allocations: 94.98 kB / 0.9917 GB, free: 18.96 MB / 0.698 GB
Notification: Performance of preOpt evaluateParameters (simulation): time 0.0006578/0.7493, allocations: 455.9 kB / 0.9921 GB, free: 18.74 MB / 0.698 GB
Notification: Performance of preOpt simplifyIfEquations (simulation): time 3.582e-05/0.7494, allocations: 43.56 kB / 0.9922 GB, free: 18.74 MB / 0.698 GB
Notification: Performance of preOpt expandDerOperator (simulation): time 0.0001204/0.7495, allocations: 71.36 kB / 0.9922 GB, free: 18.74 MB / 0.698 GB
Notification: Performance of preOpt clockPartitioning (simulation): time 0.001636/0.7511, allocations: 0.8697 MB / 0.9931 GB, free: 18.43 MB / 0.698 GB
Notification: Performance of preOpt findStateOrder (simulation): time 6.495e-05/0.7512, allocations: 11.47 kB / 0.9931 GB, free: 18.43 MB / 0.698 GB
Notification: Performance of preOpt replaceEdgeChange (simulation): time 8.461e-05/0.7513, allocations: 25.27 kB / 0.9931 GB, free: 18.43 MB / 0.698 GB
Notification: Performance of preOpt inlineArrayEqn (simulation): time 1.772e-05/0.7513, allocations: 15.47 kB / 0.9931 GB, free: 18.43 MB / 0.698 GB
Notification: Performance of preOpt removeEqualRHS (simulation): time 0.001377/0.7527, allocations: 0.7486 MB / 0.9939 GB, free: 18.24 MB / 0.698 GB
Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.003016/0.7557, allocations: 1.923 MB / 0.9957 GB, free: 17.37 MB / 0.698 GB
Notification: Performance of preOpt comSubExp (simulation): time 0.001507/0.7572, allocations: 0.8465 MB / 0.9966 GB, free: 17.06 MB / 0.698 GB
Notification: Performance of preOpt resolveLoops (simulation): time 0.0006651/0.7579, allocations: 497.5 kB / 0.997 GB, free: 16.84 MB / 0.698 GB
Notification: Performance of preOpt evalFunc (simulation): time 4.302e-05/0.7579, allocations: 12.19 kB / 0.9971 GB, free: 16.84 MB / 0.698 GB
Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 0.001242/0.7592, allocations: 1.121 MB / 0.9981 GB, free: 16.17 MB / 0.698 GB
Notification: Performance of pre-optimization done (n=101): time 2.835e-06/0.7592, allocations: 0 / 0.9981 GB, free: 16.17 MB / 0.698 GB
Notification: Performance of matching and sorting (n=107): time 0.006048/0.7652, allocations: 3.743 MB / 1.002 GB, free: 14.35 MB / 0.698 GB
Notification: Performance of inlineWhenForInitialization (initialization): time 0.0001828/0.7654, allocations: 0.6501 MB / 1.002 GB, free: 13.59 MB / 0.698 GB
Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.0007494/0.7661, allocations: 0.528 MB / 1.003 GB, free: 13.47 MB / 0.698 GB
Notification: Performance of collectPreVariables (initialization): time 7.999e-05/0.7662, allocations: 66.03 kB / 1.003 GB, free: 13.44 MB / 0.698 GB
Notification: Performance of collectInitialEqns (initialization): time 0.0002073/0.7664, allocations: 296.5 kB / 1.003 GB, free: 13.29 MB / 0.698 GB
Notification: Performance of collectInitialBindings (initialization): time 0.0002545/0.7667, allocations: 370.6 kB / 1.004 GB, free: 13.02 MB / 0.698 GB
Notification: Performance of simplifyInitialFunctions (initialization): time 0.0003381/0.767, allocations: 186 kB / 1.004 GB, free: 12.94 MB / 0.698 GB
Notification: Performance of setup shared object (initialization): time 0.0001335/0.7672, allocations: 394.4 kB / 1.004 GB, free: 12.59 MB / 0.698 GB
Notification: Performance of preBalanceInitialSystem (initialization): time 0.0009637/0.7681, allocations: 0.6399 MB / 1.005 GB, free: 12.14 MB / 0.698 GB
Notification: Performance of partitionIndependentBlocks (initialization): time 0.001169/0.7693, allocations: 0.9749 MB / 1.006 GB, free: 11.27 MB / 0.698 GB
Notification: Performance of analyzeInitialSystem (initialization): time 0.005195/0.7745, allocations: 2.511 MB / 1.008 GB, free: 9.355 MB / 0.698 GB
Notification: Performance of solveInitialSystemEqSystem (initialization): time 2.026e-05/0.7745, allocations: 2.625 kB / 1.008 GB, free: 9.355 MB / 0.698 GB
Notification: Performance of matching and sorting (n=161) (initialization): time 0.003547/0.778, allocations: 1.754 MB / 1.01 GB, free: 8.301 MB / 0.698 GB
Notification: Performance of prepare postOptimizeDAE: time 0.0002363/0.7783, allocations: 267.7 kB / 1.01 GB, free: 8.008 MB / 0.698 GB
Notification: Performance of postOpt simplifyComplexFunction (initialization): time 2.432e-05/0.7783, allocations: 8.891 kB / 1.01 GB, free: 8.008 MB / 0.698 GB
Notification: Performance of postOpt tearingSystem (initialization): time 6.167e-05/0.7784, allocations: 14.84 kB / 1.01 GB, free: 8.008 MB / 0.698 GB
Notification: Performance of postOpt solveSimpleEquations (initialization): time 0.001055/0.7794, allocations: 243.2 kB / 1.01 GB, free: 8 MB / 0.698 GB
Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 3.964e-05/0.7795, allocations: 21.09 kB / 1.01 GB, free: 8 MB / 0.698 GB
Notification: Performance of postOpt simplifyAllExpressions (initialization): time 0.0008358/0.7803, allocations: 70.75 kB / 1.011 GB, free: 7.977 MB / 0.698 GB
Notification: Performance of postOpt collapseArrayExpressions (initialization): time 0.0001131/0.7804, allocations: 53.19 kB / 1.011 GB, free: 7.965 MB / 0.698 GB
Warning: Assuming fixed start value for the following 30 variables:
         green_tee_drinker.central.AUC:VARIABLE(unit = \"kg.s/m3\" fixed = true )  \"area under curve\" type: Real
         green_tee_drinker.periodicDose.TotalCumulativeMass:VARIABLE(min = -1e-12 unit = \"kg\" fixed = true )  \"Total dose adminitrated by this source\" type: Real
         green_tee_drinker.periodicDose.absorptionLumen.AUC:VARIABLE(unit = \"kg.s/m3\" fixed = true )  \"area under curve\" type: Real
         green_tee_drinker.periodicDose.variableDose.TotalCumulativeMass:VARIABLE(min = -1e-12 unit = \"kg\" fixed = true )  \"Total dose adminitrated by this source\" type: Real
         black_tea_drinker.central.AUC:VARIABLE(unit = \"kg.s/m3\" fixed = true )  \"area under curve\" type: Real
         black_tea_drinker.periodicDose.TotalCumulativeMass:VARIABLE(min = -1e-12 unit = \"kg\" fixed = true )  \"Total dose adminitrated by this source\" type: Real
         black_tea_drinker.periodicDose.absorptionLumen.AUC:VARIABLE(unit = \"kg.s/m3\" fixed = true )  \"area under curve\" type: Real
         black_tea_drinker.periodicDose.variableDose.TotalCumulativeMass:VARIABLE(min = -1e-12 unit = \"kg\" fixed = true )  \"Total dose adminitrated by this source\" type: Real
         coffee_drinker.central.AUC:VARIABLE(unit = \"kg.s/m3\" fixed = true )  \"area under curve\" type: Real
         coffee_drinker.periodicDose.TotalCumulativeMass:VARIABLE(min = -1e-12 unit = \"kg\" fixed = true )  \"Total dose adminitrated by this source\" type: Real
         coffee_drinker.periodicDose.absorptionLumen.AUC:VARIABLE(unit = \"kg.s/m3\" fixed = true )  \"area under curve\" type: Real
         coffee_drinker.periodicDose.variableDose.TotalCumulativeMass:VARIABLE(min = -1e-12 unit = \"kg\" fixed = true )  \"Total dose adminitrated by this source\" type: Real
         coffee_drinker.central.Cmin:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true )  type: Real
         coffee_drinker.central.Cmax:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true )  type: Real
         coffee_drinker.periodicDose.absorptionLumen.Cmin:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true )  type: Real
         coffee_drinker.periodicDose.absorptionLumen.Cmax:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true )  type: Real
         black_tea_drinker.central.Cmin:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true )  type: Real
         black_tea_drinker.central.Cmax:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true )  type: Real
         black_tea_drinker.periodicDose.absorptionLumen.Cmin:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true )  type: Real
         black_tea_drinker.periodicDose.absorptionLumen.Cmax:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true )  type: Real
         green_tee_drinker.central.Cmin:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true )  type: Real
         green_tee_drinker.central.Cmax:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true )  type: Real
         green_tee_drinker.periodicDose.absorptionLumen.Cmin:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true )  type: Real
         green_tee_drinker.periodicDose.absorptionLumen.Cmax:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true )  type: Real
         coffee_drinker.periodicDose.absorptionLumen.rising:DISCRETE(fixed = true protected = true )  type: Boolean
         coffee_drinker.central.rising:DISCRETE(fixed = true protected = true )  type: Boolean
         black_tea_drinker.periodicDose.absorptionLumen.rising:DISCRETE(fixed = true protected = true )  type: Boolean
         black_tea_drinker.central.rising:DISCRETE(fixed = true protected = true )  type: Boolean
         green_tee_drinker.periodicDose.absorptionLumen.rising:DISCRETE(fixed = true protected = true )  type: Boolean
         green_tee_drinker.central.rising:DISCRETE(fixed = true protected = true )  type: Boolean
Notification: Model statistics after passing the back-end for initialization:
 * Number of independent subsystems: 38
 * Number of states: 0 ()
 * Number of discrete variables: 63 ($PRE.coffee_drinker.central.Cmin,coffee_drinker.central.Cmin,$PRE.coffee_drinker.central.Cmax,coffee_drinker.central.Cmax,$PRE.coffee_drinker.periodicDose.absorptionLumen.Cmin,coffee_drinker.periodicDose.absorptionLumen.Cmin,$PRE.coffee_drinker.periodicDose.absorptionLumen.Cmax,coffee_drinker.periodicDose.absorptionLumen.Cmax,$PRE.black_tea_drinker.central.Cmin,black_tea_drinker.central.Cmin,$PRE.black_tea_drinker.central.Cmax,black_tea_drinker.central.Cmax,$PRE.black_tea_drinker.periodicDose.absorptionLumen.Cmin,black_tea_drinker.periodicDose.absorptionLumen.Cmin,$PRE.black_tea_drinker.periodicDose.absorptionLumen.Cmax,black_tea_drinker.periodicDose.absorptionLumen.Cmax,$PRE.green_tee_drinker.central.Cmin,green_tee_drinker.central.Cmin,$PRE.green_tee_drinker.central.Cmax,green_tee_drinker.central.Cmax,$PRE.green_tee_drinker.periodicDose.absorptionLumen.Cmin,green_tee_drinker.periodicDose.absorptionLumen.Cmin,$PRE.green_tee_drinker.periodicDose.absorptionLumen.Cmax,green_tee_drinker.periodicDose.absorptionLumen.Cmax,$PRE.coffee_drinker.periodicDose.pulse.count,$PRE.coffee_drinker.periodicDose.pulse.T_start,$PRE.coffee_drinker.periodicDose.absorptionLumen.rising,$PRE.coffee_drinker.central.rising,coffee_drinker.periodicDose.pulse.count,coffee_drinker.periodicDose.pulse.T_start,coffee_drinker.periodicDose.absorptionLumen.rising,coffee_drinker.central.rising,$whenCondition15,$whenCondition14,$whenCondition13,$whenCondition12,$whenCondition11,$PRE.black_tea_drinker.periodicDose.pulse.count,$PRE.black_tea_drinker.periodicDose.pulse.T_start,$PRE.black_tea_drinker.periodicDose.absorptionLumen.rising,$PRE.black_tea_drinker.central.rising,black_tea_drinker.periodicDose.pulse.count,black_tea_drinker.periodicDose.pulse.T_start,black_tea_drinker.periodicDose.absorptionLumen.rising,black_tea_drinker.central.rising,$whenCondition10,$whenCondition9,$whenCondition8,$whenCondition7,$whenCondition6,$PRE.green_tee_drinker.periodicDose.pulse.count,$PRE.green_tee_drinker.periodicDose.pulse.T_start,$PRE.green_tee_drinker.periodicDose.absorptionLumen.rising,$PRE.green_tee_drinker.central.rising,green_tee_drinker.periodicDose.pulse.count,green_tee_drinker.periodicDose.pulse.T_start,green_tee_drinker.periodicDose.absorptionLumen.rising,green_tee_drinker.central.rising,$whenCondition5,$whenCondition4,$whenCondition3,$whenCondition2,$whenCondition1)
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for initialization (152):
 * Single equations (assignments): 143
 * Array equations: 0
 * Algorithm blocks: 9
 * Record equations: 0
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 0
 * Mixed (continuous/discrete) equation systems: 0
Notification: Performance of prepare postOptimizeDAE: time 0.0009738/0.7814, allocations: 0.5814 MB / 1.011 GB, free: 7.512 MB / 0.698 GB
Notification: Performance of postOpt lateInlineFunction (simulation): time 0.0001722/0.7816, allocations: 93.22 kB / 1.011 GB, free: 7.465 MB / 0.698 GB
Notification: Performance of postOpt wrapFunctionCalls (simulation): time 0.0002248/0.7818, allocations: 81.73 kB / 1.011 GB, free: 7.406 MB / 0.698 GB
Notification: Performance of postOpt inlineArrayEqn (simulation): time 1.25e-05/0.7818, allocations: 9.25 kB / 1.011 GB, free: 7.406 MB / 0.698 GB
Notification: Performance of postOpt constantLinearSystem (simulation): time 1.73e-05/0.7818, allocations: 2.906 kB / 1.011 GB, free: 7.406 MB / 0.698 GB
Notification: Performance of postOpt simplifysemiLinear (simulation): time 1.336e-05/0.7818, allocations: 9.281 kB / 1.011 GB, free: 7.402 MB / 0.698 GB
Notification: Performance of postOpt removeSimpleEquations (simulation): time 0.004309/0.7861, allocations: 2.328 MB / 1.014 GB, free: 5.992 MB / 0.698 GB
Notification: Performance of postOpt simplifyComplexFunction (simulation): time 5.871e-06/0.7861, allocations: 1.562 kB / 1.014 GB, free: 5.992 MB / 0.698 GB
Notification: Performance of postOpt solveSimpleEquations (simulation): time 0.0009379/0.7871, allocations: 178.3 kB / 1.014 GB, free: 5.98 MB / 0.698 GB
Notification: Performance of postOpt tearingSystem (simulation): time 1.206e-05/0.7871, allocations: 5.344 kB / 1.014 GB, free: 5.98 MB / 0.698 GB
Notification: Performance of postOpt inputDerivativesUsed (simulation): time 9.797e-05/0.7872, allocations: 37.53 kB / 1.014 GB, free: 5.965 MB / 0.698 GB
Notification: Performance of postOpt calculateStrongComponentJacobians (simulation): time 9.378e-06/0.7872, allocations: 4.531 kB / 1.014 GB, free: 5.965 MB / 0.698 GB
Notification: Performance of postOpt calculateStateSetsJacobians (simulation): time 3.807e-06/0.7872, allocations: 4.281 kB / 1.014 GB, free: 5.965 MB / 0.698 GB
Notification: Performance of postOpt symbolicJacobian (simulation): time 0.00443/0.7916, allocations: 2.266 MB / 1.016 GB, free: 4.516 MB / 0.698 GB
Notification: Performance of postOpt removeConstants (simulation): time 0.000527/0.7922, allocations: 172.5 kB / 1.016 GB, free: 4.41 MB / 0.698 GB
Notification: Performance of postOpt simplifyTimeIndepFuncCalls (simulation): time 0.0002016/0.7924, allocations: 47.05 kB / 1.016 GB, free: 4.387 MB / 0.698 GB
Notification: Performance of postOpt simplifyAllExpressions (simulation): time 0.0005768/0.7929, allocations: 51.67 kB / 1.016 GB, free: 4.375 MB / 0.698 GB
Notification: Performance of postOpt findZeroCrossings (simulation): time 0.0003059/0.7932, allocations: 105.8 kB / 1.016 GB, free: 4.348 MB / 0.698 GB
Notification: Performance of postOpt collapseArrayExpressions (simulation): time 8.549e-05/0.7933, allocations: 38.19 kB / 1.016 GB, free: 4.34 MB / 0.698 GB
Notification: Performance of sorting global known variables: time 0.0006002/0.7939, allocations: 366.3 kB / 1.017 GB, free: 4.164 MB / 0.698 GB
Notification: Performance of sort global known variables: time 8e-08/0.7939, allocations: 4 kB / 1.017 GB, free: 4.16 MB / 0.698 GB
Notification: Performance of remove unused functions: time 0.00114/0.7951, allocations: 250.2 kB / 1.017 GB, free: 4.133 MB / 0.698 GB
Notification: Model statistics after passing the back-end for simulation:
 * Number of independent subsystems: 5
 * Number of states: 21 (green_tee_drinker.central.C,green_tee_drinker.central.AUC,green_tee_drinker.elim.MExc,green_tee_drinker.periodicDose.TotalCumulativeMass,green_tee_drinker.periodicDose.absorptionLumen.C,green_tee_drinker.periodicDose.absorptionLumen.AUC,green_tee_drinker.periodicDose.variableDose.TotalCumulativeMass,black_tea_drinker.central.C,black_tea_drinker.central.AUC,black_tea_drinker.elim.MExc,black_tea_drinker.periodicDose.TotalCumulativeMass,black_tea_drinker.periodicDose.absorptionLumen.C,black_tea_drinker.periodicDose.absorptionLumen.AUC,black_tea_drinker.periodicDose.variableDose.TotalCumulativeMass,coffee_drinker.central.C,coffee_drinker.central.AUC,coffee_drinker.elim.MExc,coffee_drinker.periodicDose.TotalCumulativeMass,coffee_drinker.periodicDose.absorptionLumen.C,coffee_drinker.periodicDose.absorptionLumen.AUC,coffee_drinker.periodicDose.variableDose.TotalCumulativeMass)
 * Number of discrete variables: 39 ($whenCondition1,$whenCondition2,$whenCondition3,$whenCondition4,$whenCondition5,green_tee_drinker.central.Cmax,green_tee_drinker.central.Cmin,green_tee_drinker.central.rising,green_tee_drinker.periodicDose.absorptionLumen.Cmax,green_tee_drinker.periodicDose.absorptionLumen.Cmin,green_tee_drinker.periodicDose.absorptionLumen.rising,green_tee_drinker.periodicDose.pulse.T_start,green_tee_drinker.periodicDose.pulse.count,$whenCondition6,$whenCondition7,$whenCondition8,$whenCondition9,$whenCondition10,black_tea_drinker.central.Cmax,black_tea_drinker.central.Cmin,black_tea_drinker.central.rising,black_tea_drinker.periodicDose.absorptionLumen.Cmax,black_tea_drinker.periodicDose.absorptionLumen.Cmin,black_tea_drinker.periodicDose.absorptionLumen.rising,black_tea_drinker.periodicDose.pulse.T_start,black_tea_drinker.periodicDose.pulse.count,$whenCondition11,$whenCondition12,$whenCondition13,$whenCondition14,$whenCondition15,coffee_drinker.central.Cmax,coffee_drinker.central.Cmin,coffee_drinker.central.rising,coffee_drinker.periodicDose.absorptionLumen.Cmax,coffee_drinker.periodicDose.absorptionLumen.Cmin,coffee_drinker.periodicDose.absorptionLumen.rising,coffee_drinker.periodicDose.pulse.T_start,coffee_drinker.periodicDose.pulse.count)
 * Number of discrete states: 33 (coffee_drinker.periodicDose.pulse.count,coffee_drinker.central.Cmin,$whenCondition15,coffee_drinker.central.Cmax,$whenCondition14,coffee_drinker.central.rising,coffee_drinker.periodicDose.absorptionLumen.Cmin,$whenCondition13,coffee_drinker.periodicDose.absorptionLumen.Cmax,$whenCondition12,coffee_drinker.periodicDose.absorptionLumen.rising,black_tea_drinker.periodicDose.pulse.count,black_tea_drinker.central.Cmin,$whenCondition10,black_tea_drinker.central.Cmax,$whenCondition9,black_tea_drinker.central.rising,black_tea_drinker.periodicDose.absorptionLumen.Cmin,$whenCondition8,black_tea_drinker.periodicDose.absorptionLumen.Cmax,$whenCondition7,black_tea_drinker.periodicDose.absorptionLumen.rising,green_tee_drinker.periodicDose.pulse.count,green_tee_drinker.central.Cmin,$whenCondition5,green_tee_drinker.central.Cmax,$whenCondition4,green_tee_drinker.central.rising,green_tee_drinker.periodicDose.absorptionLumen.Cmin,$whenCondition3,green_tee_drinker.periodicDose.absorptionLumen.Cmax,$whenCondition2,green_tee_drinker.periodicDose.absorptionLumen.rising)
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for simulation (89):
 * Single equations (assignments): 77
 * Array equations: 0
 * Algorithm blocks: 6
 * Record equations: 0
 * When equations: 6
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 0
 * Mixed (continuous/discrete) equation systems: 0
Notification: Performance of Backend phase and start with SimCode phase: time 0.0002971/0.7954, allocations: 193.1 kB / 1.017 GB, free: 4.008 MB / 0.698 GB
Notification: Performance of simCode: created initialization part: time 0.003366/0.7987, allocations: 1.844 MB / 1.019 GB, free: 2.652 MB / 0.698 GB
Notification: Performance of simCode: created event and clocks part: time 3.376e-06/0.7987, allocations: 1.25 kB / 1.019 GB, free: 2.652 MB / 0.698 GB
Notification: Performance of simCode: created simulation system equations: time 0.001625/0.8004, allocations: 0.9975 MB / 1.02 GB, free: 1.902 MB / 0.698 GB
Notification: Performance of simCode: created of all other equations (e.g. parameter, nominal, assert, etc): time 0.001546/0.8019, allocations: 267.9 kB / 1.02 GB, free: 1.816 MB / 0.698 GB
Notification: Performance of simCode: created linear, non-linear and system jacobian parts: time 0.005394/0.8073, allocations: 2.811 MB / 1.023 GB, free: 15.88 MB / 0.7137 GB
Notification: Performance of simCode: some other stuff during SimCode phase: time 0.0004571/0.8078, allocations: 367.4 kB / 1.023 GB, free: 15.76 MB / 0.7137 GB
Notification: Performance of simCode: alias equations: time 0.0005376/0.8083, allocations: 93.69 kB / 1.023 GB, free: 15.73 MB / 0.7137 GB
Notification: Performance of simCode: all other stuff during SimCode phase: time 0.0001824/0.8085, allocations: 67.11 kB / 1.024 GB, free: 15.72 MB / 0.7137 GB
Notification: Performance of SimCode: time 9.42e-07/0.8085, allocations: 0 / 1.024 GB, free: 15.72 MB / 0.7137 GB
Notification: Performance of Templates: time 0.03014/0.8386, allocations: 15.42 MB / 1.039 GB, free: 10.59 MB / 0.7137 GB
"
[Timeout remaining time 659]
make -j1 -f Pharmacolibrary_Pharmacolibrary.Examples.PK_Caffeine.PK_population_Caffeine.makefile [Timeout 660]
(rm -f Pharmacolibrary_Pharmacolibrary.Examples.PK_Caffeine.PK_population_Caffeine.pipe ; mkfifo Pharmacolibrary_Pharmacolibrary.Examples.PK_Caffeine.PK_population_Caffeine.pipe ; head -c 1048576 < Pharmacolibrary_Pharmacolibrary.Examples.PK_Caffeine.PK_population_Caffeine.pipe >> ../files/Pharmacolibrary_Pharmacolibrary.Examples.PK_Caffeine.PK_population_Caffeine.sim & ./Pharmacolibrary_Pharmacolibrary.Examples.PK_Caffeine.PK_population_Caffeine -abortSlowSimulation -alarm=240  -lv LOG_STATS > Pharmacolibrary_Pharmacolibrary.Examples.PK_Caffeine.PK_population_Caffeine.pipe 2>&1) [Timeout 240]
[Calling sys.exit(0), Time elapsed: 10.670782610075548]