Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr Chemical_Chemical.Obsolete.Examples.Hemoglobin.Joels57.conf.json
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo): time 0.00128/0.00128, allocations: 99.64 kB / 18.94 MB, free: 2.551 MB / 14.72 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo): time 0.001424/0.001424, allocations: 217 kB / 22.24 MB, free: 4.855 MB / 14.72 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo): time 1.423/1.423, allocations: 230.6 MB / 256 MB, free: 8.074 MB / 206.1 MB
"
[Timeout remaining time 178]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/package.mo): time 0.1349/0.1349, allocations: 23.88 MB / 336.3 MB, free: 11.05 MB / 270.1 MB
"
[Timeout remaining time 180]
Using package Chemical with version 2.0.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/package.mo)
Using package Modelica with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo)
Using package Complex with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo)
Using package ModelicaServices with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo)
Running command: translateModel(Chemical.Obsolete.Examples.Hemoglobin.Joels57,tolerance=1e-05,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Chemical_Chemical.Obsolete.Examples.Hemoglobin.Joels57")
translateModel(Chemical.Obsolete.Examples.Hemoglobin.Joels57,tolerance=1e-05,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Chemical_Chemical.Obsolete.Examples.Hemoglobin.Joels57") [Timeout 660]
"Notification: Chemical requested package Modelica of version 4.0.0. Modelica 4.1.0 is used instead which states that it is fully compatible without conversion script needed.
Notification: Performance of FrontEnd - loaded program: time 0.002215/0.002215, allocations: 67.17 kB / 471.6 MB, free: 7.059 MB / 334.1 MB
Notification: Performance of FrontEnd - Absyn->SCode: time 0.3279/0.3301, allocations: 59.85 MB / 0.519 GB, free: 9.77 MB / 382.1 MB
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/Obsolete.mo:14337:7-14337:66:writable] Warning: An inner declaration for outer component system could not be found and was automatically generated.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/Obsolete.mo:14337:7-14337:66:writable] Notification: The diagnostics message for the missing inner is: 
Your model is using an outer \"system\" component but
an inner \"system\" component is not defined.
For simulation drag Modelica.Fluid.System into your model
to specify system properties.
Notification: Performance of NFInst.instantiate(Chemical.Obsolete.Examples.Hemoglobin.Joels57): time 0.127/0.4571, allocations: 74.39 MB / 0.5917 GB, free: 15.42 MB / 446.1 MB
Notification: Performance of NFInst.instExpressions: time 0.5467/1.004, allocations: 191.2 MB / 0.7784 GB, free: 16.23 MB / 0.5606 GB
Notification: Performance of NFInst.updateImplicitVariability: time 0.01393/1.018, allocations: 231.1 kB / 0.7786 GB, free: 16.23 MB / 0.5606 GB
Notification: Performance of NFTyping.typeComponents: time 0.01508/1.033, allocations: 4.453 MB / 0.783 GB, free: 16.21 MB / 0.5606 GB
Notification: Performance of NFTyping.typeBindings: time 0.0563/1.089, allocations: 17.87 MB / 0.8004 GB, free: 15.65 MB / 0.5606 GB
Notification: Performance of NFTyping.typeClassSections: time 0.0818/1.171, allocations: 32.66 MB / 0.8323 GB, free: 60 kB / 0.5606 GB
Notification: Performance of NFFlatten.flatten: time 0.1022/1.273, allocations: 89.11 MB / 0.9193 GB, free: 2.242 MB / 0.6388 GB
Notification: Performance of NFFlatten.resolveConnections: time 0.0812/1.354, allocations: 51.84 MB / 0.97 GB, free: 272 kB / 0.6856 GB
Notification: Performance of NFEvalConstants.evaluate: time 0.7756/2.13, allocations: 56.6 MB / 1.025 GB, free: 43.74 MB / 0.7169 GB
Notification: Performance of NFSimplifyModel.simplify: time 0.09229/2.222, allocations: 54.22 MB / 1.078 GB, free: 40.89 MB / 0.7169 GB
Notification: Performance of NFPackage.collectConstants: time 0.04086/2.263, allocations: 12.2 MB / 1.09 GB, free: 40.89 MB / 0.7169 GB
Notification: Performance of NFFlatten.collectFunctions: time 0.1173/2.38, allocations: 33.89 MB / 1.123 GB, free: 31.33 MB / 0.7169 GB
Notification: Performance of NFScalarize.scalarize: time 0.05215/2.432, allocations: 24.02 MB / 1.147 GB, free: 11.78 MB / 0.7169 GB
Notification: Performance of NFVerifyModel.verify: time 0.1424/2.575, allocations: 39.35 MB / 1.185 GB, free: 12.7 MB / 0.7326 GB
Notification: Performance of NFConvertDAE.convert: time 1.052/3.627, allocations: 159.6 MB / 1.341 GB, free: 107.9 MB / 0.8264 GB
Notification: Performance of FrontEnd - DAE generated: time 7.945e-06/3.627, allocations: 0 / 1.341 GB, free: 107.9 MB / 0.8264 GB
Notification: Performance of FrontEnd: time 2.835e-06/3.627, allocations: 3.625 kB / 1.341 GB, free: 107.9 MB / 0.8264 GB
Notification: Performance of Transformations before backend: time 0.003778/3.631, allocations: 1.531 kB / 1.341 GB, free: 107.9 MB / 0.8264 GB
Notification: Model statistics after passing the front-end and creating the data structures used by the back-end:
 * Number of equations: 11424
 * Number of variables: 11424
Notification: Performance of Generate backend data structure: time 0.2758/3.906, allocations: 71.69 MB / 1.411 GB, free: 87.5 MB / 0.8264 GB
Notification: Performance of prepare preOptimizeDAE: time 3.848e-05/3.907, allocations: 7.562 kB / 1.411 GB, free: 87.5 MB / 0.8264 GB
Notification: Performance of preOpt normalInlineFunction (simulation): time 0.08165/3.988, allocations: 11.94 MB / 1.423 GB, free: 83.33 MB / 0.8264 GB
Notification: Performance of preOpt evaluateParameters (simulation): time 0.09382/4.082, allocations: 42.62 MB / 1.464 GB, free: 65.74 MB / 0.8264 GB
Notification: Performance of preOpt simplifyIfEquations (simulation): time 0.005912/4.088, allocations: 9.238 MB / 1.473 GB, free: 56.4 MB / 0.8264 GB
Notification: Performance of preOpt expandDerOperator (simulation): time 0.03393/4.122, allocations: 4.6 MB / 1.478 GB, free: 51.8 MB / 0.8264 GB
Notification: Performance of preOpt clockPartitioning (simulation): time 0.3156/4.437, allocations: 112.9 MB / 1.588 GB, free: 2.246 MB / 0.8889 GB
Notification: Performance of preOpt findStateOrder (simulation): time 0.002193/4.44, allocations: 34.66 kB / 1.588 GB, free: 2.23 MB / 0.8889 GB
Notification: Performance of preOpt replaceEdgeChange (simulation): time 0.03634/4.476, allocations: 1.758 MB / 1.59 GB, free: 484 kB / 0.8889 GB
Notification: Performance of preOpt inlineArrayEqn (simulation): time 0.001097/4.477, allocations: 1.06 MB / 1.591 GB, free: 15.41 MB / 0.9046 GB
Notification: Performance of preOpt removeEqualRHS (simulation): time 0.6373/5.114, allocations: 153 MB / 1.74 GB, free: 333.4 MB / 0.9358 GB
Warning: The model contains alias variables with redundant start and/or conflicting nominal values. It is recommended to resolve the conflicts, because otherwise the system could be hard to solve. To print the conflicting alias sets and the chosen candidates please use -d=aliasConflicts.
Notification: Performance of preOpt removeSimpleEquations (simulation): time 1.246/6.361, allocations: 389 MB / 2.12 GB, free: 281.8 MB / 0.9358 GB
Notification: Performance of preOpt comSubExp (simulation): time 2.137/8.498, allocations: 0.6474 GB / 2.768 GB, free: 200.5 MB / 0.9358 GB
Notification: Performance of preOpt resolveLoops (simulation): time 0.09813/8.596, allocations: 60.06 MB / 2.826 GB, free: 142.5 MB / 0.9358 GB
Notification: Performance of preOpt evalFunc (simulation): time 0.838/9.434, allocations: 254.6 MB / 3.075 GB, free: 273.5 MB / 0.9358 GB
Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 0.000231/9.434, allocations: 341.8 kB / 3.075 GB, free: 273.3 MB / 0.9358 GB
Notification: Performance of preOpt simplifyInStream (simulation): time 0.0915/9.526, allocations: 29.13 MB / 3.104 GB, free: 266.4 MB / 0.9358 GB
Notification: Performance of pre-optimization done (n=2985): time 0.0001595/9.526, allocations: 0 / 3.104 GB, free: 266.4 MB / 0.9358 GB
Notification: Performance of matching and sorting (n=3387): time 2.353/11.88, allocations: 423.7 MB / 3.517 GB, free: 261.1 MB / 0.9358 GB
Notification: Performance of inlineWhenForInitialization (initialization): time 0.0002532/11.88, allocations: 446.3 kB / 3.518 GB, free: 260.9 MB / 0.9358 GB
Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.05258/11.93, allocations: 30.72 MB / 3.548 GB, free: 245.8 MB / 0.9358 GB
Notification: Performance of collectPreVariables (initialization): time 0.01259/11.94, allocations: 0.5709 MB / 3.548 GB, free: 245.3 MB / 0.9358 GB
Notification: Performance of collectInitialEqns (initialization): time 0.01416/11.96, allocations: 21.64 MB / 3.569 GB, free: 230.6 MB / 0.9358 GB
Notification: Performance of collectInitialBindings (initialization): time 0.02519/11.98, allocations: 12.42 MB / 3.582 GB, free: 218.3 MB / 0.9358 GB
Notification: Performance of simplifyInitialFunctions (initialization): time 0.04988/12.03, allocations: 9.922 MB / 3.591 GB, free: 208.4 MB / 0.9358 GB
Notification: Performance of setup shared object (initialization): time 5.079e-05/12.03, allocations: 305.1 kB / 3.592 GB, free: 208.1 MB / 0.9358 GB
Notification: Performance of preBalanceInitialSystem (initialization): time 0.06609/12.1, allocations: 39.05 MB / 3.63 GB, free: 169 MB / 0.9358 GB
Notification: Performance of partitionIndependentBlocks (initialization): time 0.07727/12.18, allocations: 53.24 MB / 3.682 GB, free: 109.6 MB / 0.9358 GB
Notification: Performance of analyzeInitialSystem (initialization): time 0.5463/12.72, allocations: 96.36 MB / 3.776 GB, free: 274 MB / 0.9358 GB
Notification: Performance of solveInitialSystemEqSystem (initialization): time 0.0004498/12.72, allocations: 129.3 kB / 3.776 GB, free: 274 MB / 0.9358 GB
Notification: Performance of matching and sorting (n=5667) (initialization): time 1.328/14.05, allocations: 257.1 MB / 4.027 GB, free: 139 MB / 0.9358 GB
Notification: Performance of prepare postOptimizeDAE: time 0.0003481/14.05, allocations: 202.9 kB / 4.027 GB, free: 138.8 MB / 0.9358 GB
Notification: Performance of postOpt simplifyComplexFunction (initialization): time 0.0007833/14.05, allocations: 444 kB / 4.028 GB, free: 138.3 MB / 0.9358 GB
Notification: Performance of postOpt tearingSystem (initialization): time 0.1725/14.23, allocations: 73.71 MB / 4.1 GB, free: 64.88 MB / 0.9358 GB
Notification: Performance of postOpt solveSimpleEquations (initialization): time 0.05154/14.28, allocations: 11.18 MB / 4.111 GB, free: 53.7 MB / 0.9358 GB
Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 1.03/15.31, allocations: 309.6 MB / 4.413 GB, free: 128.5 MB / 0.9358 GB
Notification: Performance of postOpt simplifyAllExpressions (initialization): time 0.05367/15.36, allocations: 2.481 MB / 4.415 GB, free: 126 MB / 0.9358 GB
Notification: Performance of postOpt collapseArrayExpressions (initialization): time 0.0176/15.38, allocations: 2.799 MB / 4.418 GB, free: 123.2 MB / 0.9358 GB
Notification: Model statistics after passing the back-end for initialization:
 * Number of independent subsystems: 2031
 * Number of states: 0 ()
 * Number of discrete variables: 0 ()
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for initialization (5523):
 * Single equations (assignments): 5514
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 0
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 9
 * Mixed (continuous/discrete) equation systems: 0
Notification: Torn system details for strict tearing set:
 * Linear torn systems (#iteration vars, #inner vars, density): 6 systems
   {(1,3,100.0%), (33,10,82.4%), (1,3,100.0%), (33,10,82.4%), (1,3,100.0%), (33,10,82.4%)}
 * Non-linear torn systems (#iteration vars, #inner vars): 3 systems
   {(1,3), (1,3), (1,3)}
Notification: Performance of prepare postOptimizeDAE: time 0.0499/15.43, allocations: 18.34 MB / 4.436 GB, free: 105.6 MB / 0.9358 GB
Notification: Performance of postOpt lateInlineFunction (simulation): time 0.02218/15.45, allocations: 3.169 MB / 4.439 GB, free: 104.2 MB / 0.9358 GB
Notification: Performance of postOpt wrapFunctionCalls (simulation): time 1.235/16.69, allocations: 152.3 MB / 4.588 GB, free: 254.8 MB / 0.9358 GB
Notification: Performance of postOpt inlineArrayEqn (simulation): time 0.0003051/16.69, allocations: 355.6 kB / 4.588 GB, free: 254.8 MB / 0.9358 GB
Notification: Performance of postOpt constantLinearSystem (simulation): time 0.0004544/16.69, allocations: 57.66 kB / 4.588 GB, free: 254.8 MB / 0.9358 GB
Notification: Performance of postOpt simplifysemiLinear (simulation): time 0.0009535/16.69, allocations: 178.9 kB / 4.588 GB, free: 254.8 MB / 0.9358 GB
Notification: Performance of postOpt removeSimpleEquations (simulation): time 0.9517/17.64, allocations: 223.2 MB / 4.806 GB, free: 122.6 MB / 0.9358 GB
Notification: Performance of postOpt simplifyComplexFunction (simulation): time 0.000376/17.64, allocations: 11 kB / 4.806 GB, free: 122.6 MB / 0.9358 GB
Notification: Performance of postOpt solveSimpleEquations (simulation): time 0.04378/17.68, allocations: 7.256 MB / 4.813 GB, free: 115.4 MB / 0.9358 GB
Notification: Performance of postOpt tearingSystem (simulation): time 0.09779/17.78, allocations: 39.74 MB / 4.852 GB, free: 75.9 MB / 0.9358 GB
Notification: Performance of postOpt inputDerivativesUsed (simulation): time 0.01419/17.8, allocations: 1.45 MB / 4.854 GB, free: 74.45 MB / 0.9358 GB
Notification: Performance of postOpt calculateStrongComponentJacobians (simulation): time 0.7817/18.58, allocations: 155.6 MB / 5.006 GB, free: 240.9 MB / 0.9358 GB
Notification: Performance of postOpt calculateStateSetsJacobians (simulation): time 1.343e-05/18.58, allocations: 22.88 kB / 5.006 GB, free: 240.9 MB / 0.9358 GB
Notification: Performance of postOpt symbolicJacobian (simulation): time 0.9148/19.49, allocations: 200.2 MB / 5.201 GB, free: 107.7 MB / 0.9358 GB
Notification: Performance of postOpt removeConstants (simulation): time 0.03624/19.53, allocations: 11.32 MB / 5.212 GB, free: 98.23 MB / 0.9358 GB
Notification: Performance of postOpt simplifyTimeIndepFuncCalls (simulation): time 0.018/19.55, allocations: 0.9099 MB / 5.213 GB, free: 97.32 MB / 0.9358 GB
Notification: Performance of postOpt simplifyAllExpressions (simulation): time 0.0432/19.59, allocations: 1.545 MB / 5.215 GB, free: 95.77 MB / 0.9358 GB
Notification: Performance of postOpt findZeroCrossings (simulation): time 0.02829/19.62, allocations: 4.68 MB / 5.219 GB, free: 91.08 MB / 0.9358 GB
Notification: Performance of postOpt collapseArrayExpressions (simulation): time 0.01327/19.63, allocations: 1.389 MB / 5.221 GB, free: 89.69 MB / 0.9358 GB
Notification: Performance of sorting global known variables: time 0.03743/19.67, allocations: 20.8 MB / 5.241 GB, free: 69.03 MB / 0.9358 GB
Notification: Performance of sort global known variables: time 4.41e-07/19.67, allocations: 0 / 5.241 GB, free: 69.03 MB / 0.9358 GB
Notification: Performance of remove unused functions: time 0.1065/19.77, allocations: 20.22 MB / 5.261 GB, free: 49.01 MB / 0.9358 GB
Notification: Model statistics after passing the back-end for simulation:
 * Number of independent subsystems: 45
 * Number of states: 180 (pCO2_2000.solution.temperature,pCO2_2000.O2_free.logn,pCO2_2000.H2O.logn,pCO2_2000.relaxed.OxyHm[1].logn,pCO2_2000.relaxed.OxyHm[2].logn,pCO2_2000.relaxed.OxyHm[3].logn,pCO2_2000.relaxed.OxyHm[4].logn,pCO2_2000.relaxed.DeoxyHm[1].logn,pCO2_2000.relaxed.DeoxyHm[2].logn,pCO2_2000.relaxed.DeoxyHm[3].logn,pCO2_2000.relaxed.DeoxyHm[4].logn,pCO2_2000.relaxed.HmAH[1].logn,pCO2_2000.relaxed.HmAH[2].logn,pCO2_2000.relaxed.HmAH[3].logn,pCO2_2000.relaxed.HmAH[4].logn,pCO2_2000.relaxed.HmA[1].logn,pCO2_2000.relaxed.HmA[2].logn,pCO2_2000.relaxed.HmA[3].logn,pCO2_2000.relaxed.HmA[4].logn,pCO2_2000.relaxed.HmNH3[1].logn,pCO2_2000.relaxed.HmNH3[2].logn,pCO2_2000.relaxed.HmNH3[3].logn,pCO2_2000.relaxed.HmNH3[4].logn,pCO2_2000.relaxed.HmNH2[1].logn,pCO2_2000.relaxed.HmNH2[2].logn,pCO2_2000.relaxed.HmNH2[3].logn,pCO2_2000.relaxed.HmNH2[4].logn,pCO2_2000.relaxed.HmNHCOO[1].logn,pCO2_2000.relaxed.HmNHCOO[2].logn,pCO2_2000.relaxed.HmNHCOO[3].logn,pCO2_2000.relaxed.HmNHCOO[4].logn,pCO2_2000.tensed.OxyHm[1].logn,pCO2_2000.tensed.OxyHm[2].logn,pCO2_2000.tensed.OxyHm[3].logn,pCO2_2000.tensed.OxyHm[4].logn,pCO2_2000.tensed.DeoxyHm[1].logn,pCO2_2000.tensed.DeoxyHm[2].logn,pCO2_2000.tensed.DeoxyHm[3].logn,pCO2_2000.tensed.DeoxyHm[4].logn,pCO2_2000.tensed.HmAH[1].logn,pCO2_2000.tensed.HmAH[2].logn,pCO2_2000.tensed.HmAH[3].logn,pCO2_2000.tensed.HmAH[4].logn,pCO2_2000.tensed.HmA[1].logn,pCO2_2000.tensed.HmA[2].logn,pCO2_2000.tensed.HmA[3].logn,pCO2_2000.tensed.HmA[4].logn,pCO2_2000.tensed.HmNH3[1].logn,pCO2_2000.tensed.HmNH3[2].logn,pCO2_2000.tensed.HmNH3[3].logn,pCO2_2000.tensed.HmNH3[4].logn,pCO2_2000.tensed.HmNH2[1].logn,pCO2_2000.tensed.HmNH2[2].logn,pCO2_2000.tensed.HmNH2[3].logn,pCO2_2000.tensed.HmNH2[4].logn,pCO2_2000.tensed.HmNHCOO[1].logn,pCO2_2000.tensed.HmNHCOO[2].logn,pCO2_2000.tensed.HmNHCOO[3].logn,pCO2_2000.tensed.HmNHCOO[4].logn,pCO2_2000.CO2_free.logn,pCO2_5330.solution.temperature,pCO2_5330.O2_free.logn,pCO2_5330.H2O.logn,pCO2_5330.relaxed.OxyHm[1].logn,pCO2_5330.relaxed.OxyHm[2].logn,pCO2_5330.relaxed.OxyHm[3].logn,pCO2_5330.relaxed.OxyHm[4].logn,pCO2_5330.relaxed.DeoxyHm[1].logn,pCO2_5330.relaxed.DeoxyHm[2].logn,pCO2_5330.relaxed.DeoxyHm[3].logn,pCO2_5330.relaxed.DeoxyHm[4].logn,pCO2_5330.relaxed.HmAH[1].logn,pCO2_5330.relaxed.HmAH[2].logn,pCO2_5330.relaxed.HmAH[3].logn,pCO2_5330.relaxed.HmAH[4].logn,pCO2_5330.relaxed.HmA[1].logn,pCO2_5330.relaxed.HmA[2].logn,pCO2_5330.relaxed.HmA[3].logn,pCO2_5330.relaxed.HmA[4].logn,pCO2_5330.relaxed.HmNH3[1].logn,pCO2_5330.relaxed.HmNH3[2].logn,pCO2_5330.relaxed.HmNH3[3].logn,pCO2_5330.relaxed.HmNH3[4].logn,pCO2_5330.relaxed.HmNH2[1].logn,pCO2_5330.relaxed.HmNH2[2].logn,pCO2_5330.relaxed.HmNH2[3].logn,pCO2_5330.relaxed.HmNH2[4].logn,pCO2_5330.relaxed.HmNHCOO[1].logn,pCO2_5330.relaxed.HmNHCOO[2].logn,pCO2_5330.relaxed.HmNHCOO[3].logn,pCO2_5330.relaxed.HmNHCOO[4].logn,pCO2_5330.tensed.OxyHm[1].logn,pCO2_5330.tensed.OxyHm[2].logn,pCO2_5330.tensed.OxyHm[3].logn,pCO2_5330.tensed.OxyHm[4].logn,pCO2_5330.tensed.DeoxyHm[1].logn,pCO2_5330.tensed.DeoxyHm[2].logn,pCO2_5330.tensed.DeoxyHm[3].logn,pCO2_5330.tensed.DeoxyHm[4].logn,pCO2_5330.tensed.HmAH[1].logn,pCO2_5330.tensed.HmAH[2].logn,pCO2_5330.tensed.HmAH[3].logn,pCO2_5330.tensed.HmAH[4].logn,pCO2_5330.tensed.HmA[1].logn,pCO2_5330.tensed.HmA[2].logn,pCO2_5330.tensed.HmA[3].logn,pCO2_5330.tensed.HmA[4].logn,pCO2_5330.tensed.HmNH3[1].logn,pCO2_5330.tensed.HmNH3[2].logn,pCO2_5330.tensed.HmNH3[3].logn,pCO2_5330.tensed.HmNH3[4].logn,pCO2_5330.tensed.HmNH2[1].logn,pCO2_5330.tensed.HmNH2[2].logn,pCO2_5330.tensed.HmNH2[3].logn,pCO2_5330.tensed.HmNH2[4].logn,pCO2_5330.tensed.HmNHCOO[1].logn,pCO2_5330.tensed.HmNHCOO[2].logn,pCO2_5330.tensed.HmNHCOO[3].logn,pCO2_5330.tensed.HmNHCOO[4].logn,pCO2_5330.CO2_free.logn,pCO2_9330.solution.temperature,pCO2_9330.O2_free.logn,pCO2_9330.H2O.logn,pCO2_9330.relaxed.OxyHm[1].logn,pCO2_9330.relaxed.OxyHm[2].logn,pCO2_9330.relaxed.OxyHm[3].logn,pCO2_9330.relaxed.OxyHm[4].logn,pCO2_9330.relaxed.DeoxyHm[1].logn,pCO2_9330.relaxed.DeoxyHm[2].logn,pCO2_9330.relaxed.DeoxyHm[3].logn,pCO2_9330.relaxed.DeoxyHm[4].logn,pCO2_9330.relaxed.HmAH[1].logn,pCO2_9330.relaxed.HmAH[2].logn,pCO2_9330.relaxed.HmAH[3].logn,pCO2_9330.relaxed.HmAH[4].logn,pCO2_9330.relaxed.HmA[1].logn,pCO2_9330.relaxed.HmA[2].logn,pCO2_9330.relaxed.HmA[3].logn,pCO2_9330.relaxed.HmA[4].logn,pCO2_9330.relaxed.HmNH3[1].logn,pCO2_9330.relaxed.HmNH3[2].logn,pCO2_9330.relaxed.HmNH3[3].logn,pCO2_9330.relaxed.HmNH3[4].logn,pCO2_9330.relaxed.HmNH2[1].logn,pCO2_9330.relaxed.HmNH2[2].logn,pCO2_9330.relaxed.HmNH2[3].logn,pCO2_9330.relaxed.HmNH2[4].logn,pCO2_9330.relaxed.HmNHCOO[1].logn,pCO2_9330.relaxed.HmNHCOO[2].logn,pCO2_9330.relaxed.HmNHCOO[3].logn,pCO2_9330.relaxed.HmNHCOO[4].logn,pCO2_9330.tensed.OxyHm[1].logn,pCO2_9330.tensed.OxyHm[2].logn,pCO2_9330.tensed.OxyHm[3].logn,pCO2_9330.tensed.OxyHm[4].logn,pCO2_9330.tensed.DeoxyHm[1].logn,pCO2_9330.tensed.DeoxyHm[2].logn,pCO2_9330.tensed.DeoxyHm[3].logn,pCO2_9330.tensed.DeoxyHm[4].logn,pCO2_9330.tensed.HmAH[1].logn,pCO2_9330.tensed.HmAH[2].logn,pCO2_9330.tensed.HmAH[3].logn,pCO2_9330.tensed.HmAH[4].logn,pCO2_9330.tensed.HmA[1].logn,pCO2_9330.tensed.HmA[2].logn,pCO2_9330.tensed.HmA[3].logn,pCO2_9330.tensed.HmA[4].logn,pCO2_9330.tensed.HmNH3[1].logn,pCO2_9330.tensed.HmNH3[2].logn,pCO2_9330.tensed.HmNH3[3].logn,pCO2_9330.tensed.HmNH3[4].logn,pCO2_9330.tensed.HmNH2[1].logn,pCO2_9330.tensed.HmNH2[2].logn,pCO2_9330.tensed.HmNH2[3].logn,pCO2_9330.tensed.HmNH2[4].logn,pCO2_9330.tensed.HmNHCOO[1].logn,pCO2_9330.tensed.HmNHCOO[2].logn,pCO2_9330.tensed.HmNHCOO[3].logn,pCO2_9330.tensed.HmNHCOO[4].logn,pCO2_9330.CO2_free.logn)
 * Number of discrete variables: 0 ()
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for simulation (3702):
 * Single equations (assignments): 3693
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 0
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 9
 * Mixed (continuous/discrete) equation systems: 0
Notification: Torn system details for strict tearing set:
 * Linear torn systems (#iteration vars, #inner vars, density): 6 systems
   {(1,3,100.0%), (33,10,82.4%), (1,3,100.0%), (33,10,82.4%), (1,3,100.0%), (33,10,82.4%)}
 * Non-linear torn systems (#iteration vars, #inner vars): 3 systems
   {(1,3), (1,3), (1,3)}
Notification: Performance of Backend phase and start with SimCode phase: time 0.0358/19.81, allocations: 10.81 MB / 5.271 GB, free: 39.48 MB / 0.9358 GB
Notification: Performance of simCode: created initialization part: time 0.5889/20.4, allocations: 85.29 MB / 5.354 GB, free: 261.3 MB / 0.9358 GB
Notification: Performance of simCode: created event and clocks part: time 1.553e-05/20.4, allocations: 3.938 kB / 5.354 GB, free: 261.3 MB / 0.9358 GB
Notification: Performance of simCode: created simulation system equations: time 0.1295/20.53, allocations: 54.54 MB / 5.408 GB, free: 239.8 MB / 0.9358 GB
Notification: Performance of simCode: created of all other equations (e.g. parameter, nominal, assert, etc): time 0.0618/20.59, allocations: 7.69 MB / 5.415 GB, free: 236.9 MB / 0.9358 GB
Notification: Performance of simCode: created linear, non-linear and system jacobian parts: time 0.3012/20.89, allocations: 122.9 MB / 5.535 GB, free: 155.5 MB / 0.9358 GB
Notification: Performance of simCode: some other stuff during SimCode phase: time 0.05339/20.95, allocations: 30.57 MB / 5.565 GB, free: 133 MB / 0.9358 GB
Notification: Performance of simCode: alias equations: time 0.05692/21, allocations: 15.45 MB / 5.58 GB, free: 119.8 MB / 0.9358 GB
Notification: Performance of simCode: all other stuff during SimCode phase: time 0.0276/21.03, allocations: 4.251 MB / 5.584 GB, free: 115.5 MB / 0.9358 GB
Notification: Performance of SimCode: time 1.232e-06/21.03, allocations: 0 / 5.584 GB, free: 115.5 MB / 0.9358 GB
Notification: Performance of Templates: time 2.657/23.69, allocations: 1.075 GB / 6.659 GB, free: 42.19 MB / 0.9358 GB
"
[Timeout remaining time 636]
make -j1 -f Chemical_Chemical.Obsolete.Examples.Hemoglobin.Joels57.makefile [Timeout 660]
(rm -f Chemical_Chemical.Obsolete.Examples.Hemoglobin.Joels57.pipe ; mkfifo Chemical_Chemical.Obsolete.Examples.Hemoglobin.Joels57.pipe ; head -c 1048576 < Chemical_Chemical.Obsolete.Examples.Hemoglobin.Joels57.pipe >> ../files/Chemical_Chemical.Obsolete.Examples.Hemoglobin.Joels57.sim & ./Chemical_Chemical.Obsolete.Examples.Hemoglobin.Joels57  -abortSlowSimulation -alarm=480 -lv LOG_STATS > Chemical_Chemical.Obsolete.Examples.Hemoglobin.Joels57.pipe 2>&1) [Timeout 480]
[Calling sys.exit(0), Time elapsed: 64.14907637238503]
Failed to read output from testmodel.py, exit status != 0:
23.696442184969783 23.706725061 20.077048564
Calling exit ...
<OMPython.OMCSessionZMQ object at 0x7f35a582afe0>