Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr Bodylight_Bodylight.Chemical.Examples.TwoConcentrationCompartments.conf.json
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo): time 0.00257/0.00257, allocations: 105.5 kB / 18.95 MB, free: 1.176 MB / 13.93 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo): time 0.002391/0.002391, allocations: 207.2 kB / 22.24 MB, free: 3.574 MB / 13.93 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo): time 1.775/1.775, allocations: 230.6 MB / 256 MB, free: 9.602 MB / 202.7 MB
"
[Timeout remaining time 178]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/package.mo): time 0.1016/0.1016, allocations: 17.17 MB / 329.6 MB, free: 0.7266 MB / 250.7 MB
"
[Timeout remaining time 180]
Using package Bodylight with version 1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/package.mo)
Using package Modelica with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo)
Using package Complex with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo)
Using package ModelicaServices with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo)
Running command: translateModel(Bodylight.Chemical.Examples.TwoConcentrationCompartments,tolerance=1e-06,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Bodylight_Bodylight.Chemical.Examples.TwoConcentrationCompartments")
translateModel(Bodylight.Chemical.Examples.TwoConcentrationCompartments,tolerance=1e-06,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Bodylight_Bodylight.Chemical.Examples.TwoConcentrationCompartments") [Timeout 660]
"Notification: Bodylight requested package Modelica of version 4.0.0. Modelica 4.1.0 is used instead which states that it is fully compatible without conversion script needed.
Notification: Performance of FrontEnd - loaded program: time 0.003784/0.003784, allocations: 71.89 kB / 460.7 MB, free: 26.39 MB / 330.7 MB
Notification: Performance of FrontEnd - Absyn->SCode: time 0.1113/0.1151, allocations: 57.76 MB / 0.5063 GB, free: 0.5312 MB / 362.7 MB
Notification: Performance of NFInst.instantiate(Bodylight.Chemical.Examples.TwoConcentrationCompartments): time 0.006363/0.1215, allocations: 3.471 MB / 0.5097 GB, free: 13.04 MB / 378.7 MB
Notification: Performance of NFInst.instExpressions: time 0.006266/0.1278, allocations: 2.988 MB / 0.5126 GB, free: 10.05 MB / 378.7 MB
Notification: Performance of NFInst.updateImplicitVariability: time 0.0002347/0.128, allocations: 19.81 kB / 0.5126 GB, free: 10.03 MB / 378.7 MB
Notification: Performance of NFTyping.typeComponents: time 0.000245/0.1282, allocations: 67.3 kB / 0.5127 GB, free: 9.961 MB / 378.7 MB
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.TwoConcentrationCompartments.substance.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.Chemical.Examples.TwoConcentrationCompartments.substance.Utilities.readReal' contains a call to impure function 'Bodylight.Chemical.Examples.TwoConcentrationCompartments.substance.Utilities.UnitConversions.findUnit'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.TwoConcentrationCompartments.substance1.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.Chemical.Examples.TwoConcentrationCompartments.substance1.Utilities.readReal' contains a call to impure function 'Bodylight.Chemical.Examples.TwoConcentrationCompartments.substance1.Utilities.UnitConversions.findUnit'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Hydraulic.mo:1482:17-1484:29:writable] Warning: In relation resistor.Resistance == 0.0, == on Real numbers is only allowed inside functions.
Notification: Performance of NFTyping.typeBindings: time 0.001562/0.1298, allocations: 497.2 kB / 0.5132 GB, free: 9.473 MB / 378.7 MB
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.TwoConcentrationCompartments.substance.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.Chemical.Examples.TwoConcentrationCompartments.substance.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.TwoConcentrationCompartments.substance1.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.Chemical.Examples.TwoConcentrationCompartments.substance1.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
Notification: Performance of NFTyping.typeClassSections: time 0.001829/0.1316, allocations: 0.5057 MB / 0.5137 GB, free: 8.969 MB / 378.7 MB
Notification: Performance of NFFlatten.flatten: time 0.006256/0.1379, allocations: 5.089 MB / 0.5186 GB, free: 3.871 MB / 378.7 MB
Notification: Performance of NFFlatten.resolveConnections: time 0.0002801/0.1382, allocations: 78.55 kB / 0.5187 GB, free: 3.789 MB / 378.7 MB
Notification: Performance of NFEvalConstants.evaluate: time 0.003101/0.1413, allocations: 1.475 MB / 0.5201 GB, free: 2.312 MB / 378.7 MB
Notification: Performance of NFSimplifyModel.simplify: time 0.004334/0.1456, allocations: 1.697 MB / 0.5218 GB, free: 0.6133 MB / 378.7 MB
Notification: Performance of NFPackage.collectConstants: time 0.0007209/0.1463, allocations: 292 kB / 0.5221 GB, free: 336 kB / 378.7 MB
Notification: Performance of NFFlatten.collectFunctions: time 0.0006667/0.147, allocations: 292 kB / 0.5224 GB, free: 44 kB / 378.7 MB
Notification: Performance of NFScalarize.scalarize: time 0.001111/0.1481, allocations: 0.9901 MB / 0.5233 GB, free: 15.05 MB / 394.7 MB
Notification: Performance of NFVerifyModel.verify: time 0.001647/0.1497, allocations: 1.001 MB / 0.5243 GB, free: 14.05 MB / 394.7 MB
Notification: Performance of NFConvertDAE.convert: time 0.004046/0.1538, allocations: 2.914 MB / 0.5271 GB, free: 11.12 MB / 394.7 MB
Notification: Performance of FrontEnd - DAE generated: time 9.448e-06/0.1538, allocations: 4 kB / 0.5271 GB, free: 11.12 MB / 394.7 MB
Notification: Performance of FrontEnd: time 1.964e-06/0.1538, allocations: 3.938 kB / 0.5271 GB, free: 11.12 MB / 394.7 MB
Notification: Performance of Transformations before backend: time 4.593e-05/0.1539, allocations: 0 / 0.5271 GB, free: 11.12 MB / 394.7 MB
Notification: Model statistics after passing the front-end and creating the data structures used by the back-end:
 * Number of equations: 164
 * Number of variables: 164
Notification: Performance of Generate backend data structure: time 0.02932/0.1832, allocations: 4.578 MB / 0.5316 GB, free: 6.492 MB / 394.7 MB
Notification: Performance of prepare preOptimizeDAE: time 5.439e-05/0.1832, allocations: 8.031 kB / 0.5316 GB, free: 6.484 MB / 394.7 MB
Notification: Performance of preOpt normalInlineFunction (simulation): time 0.0008328/0.1841, allocations: 152.2 kB / 0.5318 GB, free: 6.336 MB / 394.7 MB
Notification: Performance of preOpt evaluateParameters (simulation): time 0.003904/0.188, allocations: 0.8966 MB / 0.5326 GB, free: 5.41 MB / 394.7 MB
Notification: Performance of preOpt simplifyIfEquations (simulation): time 0.004406/0.1924, allocations: 2.839 MB / 0.5354 GB, free: 1.934 MB / 394.7 MB
Notification: Performance of preOpt expandDerOperator (simulation): time 0.001502/0.1939, allocations: 155.8 kB / 0.5356 GB, free: 1.781 MB / 394.7 MB
Notification: Performance of preOpt clockPartitioning (simulation): time 0.01127/0.2051, allocations: 2.57 MB / 0.5381 GB, free: 15.18 MB / 410.7 MB
Notification: Performance of preOpt findStateOrder (simulation): time 4.874e-05/0.2052, allocations: 7.938 kB / 0.5381 GB, free: 15.18 MB / 410.7 MB
Notification: Performance of preOpt replaceEdgeChange (simulation): time 0.0004381/0.2056, allocations: 28 kB / 0.5381 GB, free: 15.15 MB / 410.7 MB
Notification: Performance of preOpt inlineArrayEqn (simulation): time 3.605e-05/0.2057, allocations: 16 kB / 0.5381 GB, free: 15.13 MB / 410.7 MB
Notification: Performance of preOpt removeEqualRHS (simulation): time 0.008234/0.2139, allocations: 1.817 MB / 0.5399 GB, free: 13.32 MB / 410.7 MB
Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.05895/0.2728, allocations: 9.989 MB / 0.5497 GB, free: 3.254 MB / 410.7 MB
Notification: Performance of preOpt comSubExp (simulation): time 0.006899/0.2797, allocations: 1.883 MB / 0.5515 GB, free: 1.355 MB / 410.7 MB
Notification: Performance of preOpt resolveLoops (simulation): time 0.2118/0.4916, allocations: 1.765 MB / 0.5532 GB, free: 44.95 MB / 410.7 MB
Notification: Performance of preOpt evalFunc (simulation): time 0.0007309/0.4923, allocations: 13.8 kB / 0.5532 GB, free: 44.95 MB / 410.7 MB
Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 0.005003/0.4973, allocations: 2.457 MB / 0.5556 GB, free: 44.32 MB / 410.7 MB
Notification: Performance of pre-optimization done (n=123): time 4.088e-06/0.4973, allocations: 0 / 0.5556 GB, free: 44.32 MB / 410.7 MB
Notification: Performance of matching and sorting (n=123): time 0.01081/0.5081, allocations: 5.235 MB / 0.5607 GB, free: 42.37 MB / 410.7 MB
Notification: Performance of inlineWhenForInitialization (initialization): time 5.195e-05/0.5082, allocations: 92.52 kB / 0.5608 GB, free: 42.27 MB / 410.7 MB
Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.0007687/0.509, allocations: 0.6194 MB / 0.5614 GB, free: 42.02 MB / 410.7 MB
Notification: Performance of collectPreVariables (initialization): time 0.000483/0.5094, allocations: 66.23 kB / 0.5615 GB, free: 41.95 MB / 410.7 MB
Notification: Performance of collectInitialEqns (initialization): time 0.0002199/0.5097, allocations: 327.8 kB / 0.5618 GB, free: 41.72 MB / 410.7 MB
Notification: Performance of collectInitialBindings (initialization): time 0.000588/0.5103, allocations: 0.563 MB / 0.5624 GB, free: 41.34 MB / 410.7 MB
Notification: Performance of simplifyInitialFunctions (initialization): time 0.001109/0.5114, allocations: 369.9 kB / 0.5627 GB, free: 41.2 MB / 410.7 MB
Notification: Performance of setup shared object (initialization): time 0.0001259/0.5115, allocations: 364.3 kB / 0.5631 GB, free: 40.87 MB / 410.7 MB
Notification: Performance of preBalanceInitialSystem (initialization): time 0.004225/0.5157, allocations: 2.114 MB / 0.5651 GB, free: 40.07 MB / 410.7 MB
Notification: Performance of partitionIndependentBlocks (initialization): time 0.004553/0.5203, allocations: 2.276 MB / 0.5674 GB, free: 39.19 MB / 410.7 MB
Notification: Performance of analyzeInitialSystem (initialization): time 0.1946/0.7149, allocations: 26.58 MB / 0.5933 GB, free: 19.14 MB / 410.7 MB
Notification: Performance of solveInitialSystemEqSystem (initialization): time 9.037e-06/0.7149, allocations: 4 kB / 0.5933 GB, free: 19.14 MB / 410.7 MB
Notification: Performance of matching and sorting (n=237) (initialization): time 0.008155/0.7231, allocations: 4.708 MB / 0.5979 GB, free: 14.41 MB / 410.7 MB
Notification: Performance of prepare postOptimizeDAE: time 4.492e-05/0.7231, allocations: 37.83 kB / 0.5979 GB, free: 14.37 MB / 410.7 MB
Notification: Performance of postOpt simplifyComplexFunction (initialization): time 1.324e-05/0.7231, allocations: 3.984 kB / 0.5979 GB, free: 14.37 MB / 410.7 MB
Notification: Performance of postOpt tearingSystem (initialization): time 2.779e-05/0.7232, allocations: 8 kB / 0.598 GB, free: 14.36 MB / 410.7 MB
Notification: Performance of postOpt solveSimpleEquations (initialization): time 0.08776/0.8109, allocations: 16.2 MB / 0.6138 GB, free: 14.14 MB / 426.7 MB
Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 6.241e-05/0.811, allocations: 8.938 kB / 0.6138 GB, free: 14.13 MB / 426.7 MB
Notification: Performance of postOpt simplifyAllExpressions (initialization): time 0.005144/0.8161, allocations: 0.7704 MB / 0.6145 GB, free: 13.39 MB / 426.7 MB
Notification: Performance of postOpt collapseArrayExpressions (initialization): time 0.0006628/0.8168, allocations: 56 kB / 0.6146 GB, free: 13.34 MB / 426.7 MB
Warning: Assuming fixed start value for the following 1 variables:
         inertia.q_in.q:VARIABLE(flow=true start = advectionStream.SolutionFlow unit = \"m3/s\" fixed = true nominal = 1.6666666666666667e-8 )  \"Volume flow\" type: Real
Notification: Model statistics after passing the back-end for initialization:
 * Number of independent subsystems: 6
 * Number of states: 0 ()
 * Number of discrete variables: 5 (pulse.count,$PRE.pulse.count,pulse.T_start,$PRE.pulse.T_start,$whenCondition1)
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for initialization (236):
 * Single equations (assignments): 235
 * Array equations: 0
 * Algorithm blocks: 1
 * Record equations: 0
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 0
 * Mixed (continuous/discrete) equation systems: 0
Notification: Performance of prepare postOptimizeDAE: time 0.001244/0.818, allocations: 332 kB / 0.6149 GB, free: 13.01 MB / 426.7 MB
Notification: Performance of postOpt lateInlineFunction (simulation): time 0.0004649/0.8185, allocations: 99.34 kB / 0.615 GB, free: 12.91 MB / 426.7 MB
Notification: Performance of postOpt wrapFunctionCalls (simulation): time 0.008641/0.8271, allocations: 3.917 MB / 0.6188 GB, free: 8.977 MB / 426.7 MB
Notification: Performance of postOpt inlineArrayEqn (simulation): time 1.996e-05/0.8272, allocations: 12 kB / 0.6188 GB, free: 8.965 MB / 426.7 MB
Notification: Performance of postOpt constantLinearSystem (simulation): time 1.781e-05/0.8272, allocations: 0 / 0.6188 GB, free: 8.965 MB / 426.7 MB
Notification: Performance of postOpt simplifysemiLinear (simulation): time 1.445e-05/0.8272, allocations: 7.922 kB / 0.6188 GB, free: 8.957 MB / 426.7 MB
Notification: Performance of postOpt removeSimpleEquations (simulation): time 0.006437/0.8336, allocations: 3.621 MB / 0.6224 GB, free: 5.391 MB / 426.7 MB
Notification: Performance of postOpt simplifyComplexFunction (simulation): time 9.497e-06/0.8336, allocations: 1.031 kB / 0.6224 GB, free: 5.391 MB / 426.7 MB
Notification: Performance of postOpt solveSimpleEquations (simulation): time 0.1051/0.9388, allocations: 16.14 MB / 0.6381 GB, free: 5.227 MB / 442.7 MB
Notification: Performance of postOpt tearingSystem (simulation): time 3.665e-05/0.9388, allocations: 4 kB / 0.6381 GB, free: 5.223 MB / 442.7 MB
Notification: Performance of postOpt inputDerivativesUsed (simulation): time 0.001364/0.9402, allocations: 91.86 kB / 0.6382 GB, free: 5.133 MB / 442.7 MB
Notification: Performance of postOpt calculateStrongComponentJacobians (simulation): time 1.227e-05/0.9402, allocations: 4 kB / 0.6382 GB, free: 5.129 MB / 442.7 MB
Notification: Performance of postOpt calculateStateSetsJacobians (simulation): time 6.452e-06/0.9402, allocations: 4 kB / 0.6382 GB, free: 5.125 MB / 442.7 MB
Notification: Performance of postOpt symbolicJacobian (simulation): time 0.0159/0.9561, allocations: 4.895 MB / 0.643 GB, free: 212 kB / 442.7 MB
Notification: Performance of postOpt removeConstants (simulation): time 0.00224/0.9583, allocations: 498.4 kB / 0.6435 GB, free: 15.72 MB / 458.7 MB
Notification: Performance of postOpt simplifyTimeIndepFuncCalls (simulation): time 0.0007432/0.9591, allocations: 83.94 kB / 0.6436 GB, free: 15.64 MB / 458.7 MB
Notification: Performance of postOpt simplifyAllExpressions (simulation): time 0.006288/0.9654, allocations: 0.6553 MB / 0.6442 GB, free: 14.98 MB / 458.7 MB
Notification: Performance of postOpt findZeroCrossings (simulation): time 0.001032/0.9664, allocations: 144.7 kB / 0.6444 GB, free: 14.84 MB / 458.7 MB
Notification: Performance of postOpt collapseArrayExpressions (simulation): time 0.0003906/0.9668, allocations: 41.28 kB / 0.6444 GB, free: 14.8 MB / 458.7 MB
Notification: Performance of sorting global known variables: time 0.0008479/0.9676, allocations: 419 kB / 0.6448 GB, free: 14.39 MB / 458.7 MB
Notification: Performance of sort global known variables: time 1.11e-07/0.9676, allocations: 0 / 0.6448 GB, free: 14.39 MB / 458.7 MB
Notification: Performance of remove unused functions: time 0.00235/0.97, allocations: 0.613 MB / 0.6454 GB, free: 13.78 MB / 458.7 MB
Notification: Model statistics after passing the back-end for simulation:
 * Number of independent subsystems: 2
 * Number of states: 103 (substance.state,substance1.state,advectionStream.c[2],advectionStream.c[3],advectionStream.c[4],advectionStream.c[5],advectionStream.c[6],advectionStream.c[7],advectionStream.c[8],advectionStream.c[9],advectionStream.c[10],advectionStream.c[11],advectionStream.c[12],advectionStream.c[13],advectionStream.c[14],advectionStream.c[15],advectionStream.c[16],advectionStream.c[17],advectionStream.c[18],advectionStream.c[19],advectionStream.c[20],advectionStream.c[21],advectionStream.c[22],advectionStream.c[23],advectionStream.c[24],advectionStream.c[25],advectionStream.c[26],advectionStream.c[27],advectionStream.c[28],advectionStream.c[29],advectionStream.c[30],advectionStream.c[31],advectionStream.c[32],advectionStream.c[33],advectionStream.c[34],advectionStream.c[35],advectionStream.c[36],advectionStream.c[37],advectionStream.c[38],advectionStream.c[39],advectionStream.c[40],advectionStream.c[41],advectionStream.c[42],advectionStream.c[43],advectionStream.c[44],advectionStream.c[45],advectionStream.c[46],advectionStream.c[47],advectionStream.c[48],advectionStream.c[49],advectionStream.c[50],advectionStream.c[51],advectionStream.c[52],advectionStream.c[53],advectionStream.c[54],advectionStream.c[55],advectionStream.c[56],advectionStream.c[57],advectionStream.c[58],advectionStream.c[59],advectionStream.c[60],advectionStream.c[61],advectionStream.c[62],advectionStream.c[63],advectionStream.c[64],advectionStream.c[65],advectionStream.c[66],advectionStream.c[67],advectionStream.c[68],advectionStream.c[69],advectionStream.c[70],advectionStream.c[71],advectionStream.c[72],advectionStream.c[73],advectionStream.c[74],advectionStream.c[75],advectionStream.c[76],advectionStream.c[77],advectionStream.c[78],advectionStream.c[79],advectionStream.c[80],advectionStream.c[81],advectionStream.c[82],advectionStream.c[83],advectionStream.c[84],advectionStream.c[85],advectionStream.c[86],advectionStream.c[87],advectionStream.c[88],advectionStream.c[89],advectionStream.c[90],advectionStream.c[91],advectionStream.c[92],advectionStream.c[93],advectionStream.c[94],advectionStream.c[95],advectionStream.c[96],advectionStream.c[97],advectionStream.c[98],advectionStream.c[99],elasticVessel.volume,elasticVessel1.volume,inertia.q_in.q)
 * Number of discrete variables: 3 ($whenCondition1,pulse.T_start,pulse.count)
 * Number of discrete states: 1 (pulse.count)
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for simulation (123):
 * Single equations (assignments): 121
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 0
 * When equations: 2
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 0
 * Mixed (continuous/discrete) equation systems: 0
Notification: Performance of Backend phase and start with SimCode phase: time 0.0006355/0.9706, allocations: 207.8 kB / 0.6456 GB, free: 13.56 MB / 458.7 MB
Notification: Performance of simCode: created initialization part: time 0.01375/0.9844, allocations: 4.025 MB / 0.6495 GB, free: 9.523 MB / 458.7 MB
Notification: Performance of simCode: created event and clocks part: time 7.164e-06/0.9844, allocations: 0 / 0.6495 GB, free: 9.523 MB / 458.7 MB
Notification: Performance of simCode: created simulation system equations: time 0.007144/0.9915, allocations: 1.868 MB / 0.6513 GB, free: 7.652 MB / 458.7 MB
Notification: Performance of simCode: created of all other equations (e.g. parameter, nominal, assert, etc): time 0.003642/0.9952, allocations: 0.5109 MB / 0.6518 GB, free: 7.156 MB / 458.7 MB
Notification: Performance of simCode: created linear, non-linear and system jacobian parts: time 0.02188/1.017, allocations: 9.279 MB / 0.6609 GB, free: 13.89 MB / 474.7 MB
Notification: Performance of simCode: some other stuff during SimCode phase: time 0.0009743/1.018, allocations: 0.5446 MB / 0.6614 GB, free: 13.31 MB / 474.7 MB
Notification: Performance of simCode: alias equations: time 0.005814/1.024, allocations: 0.8171 MB / 0.6622 GB, free: 12.49 MB / 474.7 MB
Notification: Performance of simCode: all other stuff during SimCode phase: time 0.001409/1.025, allocations: 91.42 kB / 0.6623 GB, free: 12.41 MB / 474.7 MB
Notification: Performance of SimCode: time 1.563e-06/1.025, allocations: 4 kB / 0.6623 GB, free: 12.4 MB / 474.7 MB
Notification: Performance of Templates: time 0.07532/1.101, allocations: 45.53 MB / 0.7068 GB, free: 15.4 MB / 0.5105 GB
"
[Timeout remaining time 659]
make -j1 -f Bodylight_Bodylight.Chemical.Examples.TwoConcentrationCompartments.makefile [Timeout 660]
(rm -f Bodylight_Bodylight.Chemical.Examples.TwoConcentrationCompartments.pipe ; mkfifo Bodylight_Bodylight.Chemical.Examples.TwoConcentrationCompartments.pipe ; head -c 1048576 < Bodylight_Bodylight.Chemical.Examples.TwoConcentrationCompartments.pipe >> ../files/Bodylight_Bodylight.Chemical.Examples.TwoConcentrationCompartments.sim & ./Bodylight_Bodylight.Chemical.Examples.TwoConcentrationCompartments -abortSlowSimulation -alarm=240  -lv LOG_STATS > Bodylight_Bodylight.Chemical.Examples.TwoConcentrationCompartments.pipe 2>&1) [Timeout 240]
[Calling sys.exit(0), Time elapsed: 8.389784124679863]