Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr Bodylight_Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.conf.json
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo): time 0.001908/0.001908, allocations: 105.5 kB / 18.95 MB, free: 1.18 MB / 13.93 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo): time 0.00211/0.00211, allocations: 214.3 kB / 22.25 MB, free: 3.582 MB / 13.93 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo): time 1.706/1.706, allocations: 230.6 MB / 256 MB, free: 9.605 MB / 202.7 MB
"
[Timeout remaining time 178]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/package.mo): time 0.1004/0.1004, allocations: 17.15 MB / 329.6 MB, free: 0.7305 MB / 250.7 MB
"
[Timeout remaining time 180]
Using package Bodylight with version 1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/package.mo)
Using package Modelica with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo)
Using package Complex with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo)
Using package ModelicaServices with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo)
Running command: translateModel(Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC,tolerance=1e-14,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Bodylight_Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC")
translateModel(Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC,tolerance=1e-14,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Bodylight_Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC") [Timeout 660]
"Notification: Bodylight requested package Modelica of version 4.0.0. Modelica 4.1.0 is used instead which states that it is fully compatible without conversion script needed.
Notification: Performance of FrontEnd - loaded program: time 0.003724/0.003724, allocations: 67.89 kB / 460.7 MB, free: 26.36 MB / 330.7 MB
Notification: Performance of FrontEnd - Absyn->SCode: time 0.1076/0.1113, allocations: 57.76 MB / 0.5063 GB, free: 0.4961 MB / 362.7 MB
Notification: Performance of NFInst.instantiate(Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC): time 0.01262/0.1239, allocations: 9.34 MB / 0.5154 GB, free: 7.117 MB / 378.7 MB
Notification: Performance of NFInst.instExpressions: time 0.02025/0.1442, allocations: 11.03 MB / 0.5262 GB, free: 12.05 MB / 394.7 MB
Notification: Performance of NFInst.updateImplicitVariability: time 0.002086/0.1463, allocations: 102.9 kB / 0.5263 GB, free: 11.95 MB / 394.7 MB
Notification: Performance of NFTyping.typeComponents: time 0.001275/0.1476, allocations: 400.1 kB / 0.5267 GB, free: 11.55 MB / 394.7 MB
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T0.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T0.Utilities.readReal' contains a call to impure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T0.Utilities.UnitConversions.findUnit'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T1.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T1.Utilities.readReal' contains a call to impure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T1.Utilities.UnitConversions.findUnit'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R1.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R1.Utilities.readReal' contains a call to impure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R1.Utilities.UnitConversions.findUnit'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T2.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T2.Utilities.readReal' contains a call to impure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T2.Utilities.UnitConversions.findUnit'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R2.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R2.Utilities.readReal' contains a call to impure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R2.Utilities.UnitConversions.findUnit'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T3.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T3.Utilities.readReal' contains a call to impure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T3.Utilities.UnitConversions.findUnit'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R3.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R3.Utilities.readReal' contains a call to impure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R3.Utilities.UnitConversions.findUnit'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T4.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T4.Utilities.readReal' contains a call to impure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T4.Utilities.UnitConversions.findUnit'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R4.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R4.Utilities.readReal' contains a call to impure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R4.Utilities.UnitConversions.findUnit'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R0.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R0.Utilities.readReal' contains a call to impure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R0.Utilities.UnitConversions.findUnit'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.oxygen_unbound.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.oxygen_unbound.Utilities.readReal' contains a call to impure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.oxygen_unbound.Utilities.UnitConversions.findUnit'.
Notification: Performance of NFTyping.typeBindings: time 0.008004/0.1556, allocations: 2.149 MB / 0.5288 GB, free: 9.391 MB / 394.7 MB
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T0.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T0.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T1.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T1.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R1.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R1.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T2.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T2.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R2.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R2.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T3.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T3.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R3.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R3.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T4.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T4.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R4.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R4.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R0.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R0.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.oxygen_unbound.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.oxygen_unbound.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
Notification: Performance of NFTyping.typeClassSections: time 0.007228/0.1628, allocations: 2.043 MB / 0.5308 GB, free: 7.371 MB / 394.7 MB
Notification: Performance of NFFlatten.flatten: time 0.005705/0.1685, allocations: 2.769 MB / 0.5335 GB, free: 4.586 MB / 394.7 MB
Notification: Performance of NFFlatten.resolveConnections: time 0.0009878/0.1695, allocations: 380.1 kB / 0.5339 GB, free: 4.188 MB / 394.7 MB
Notification: Performance of NFEvalConstants.evaluate: time 0.001901/0.1714, allocations: 1 MB / 0.5348 GB, free: 3.184 MB / 394.7 MB
Notification: Performance of NFSimplifyModel.simplify: time 0.002703/0.1741, allocations: 1.322 MB / 0.5361 GB, free: 1.855 MB / 394.7 MB
Notification: Performance of NFPackage.collectConstants: time 0.0003769/0.1745, allocations: 144 kB / 0.5363 GB, free: 1.715 MB / 394.7 MB
Notification: Performance of NFFlatten.collectFunctions: time 0.0005484/0.175, allocations: 160 kB / 0.5364 GB, free: 1.559 MB / 394.7 MB
Notification: Performance of NFScalarize.scalarize: time 0.0007868/0.1758, allocations: 0.5253 MB / 0.5369 GB, free: 1.031 MB / 394.7 MB
Notification: Performance of NFVerifyModel.verify: time 0.001376/0.1772, allocations: 0.8705 MB / 0.5378 GB, free: 160 kB / 394.7 MB
Notification: Performance of NFConvertDAE.convert: time 0.003928/0.1811, allocations: 2.474 MB / 0.5402 GB, free: 13.67 MB / 410.7 MB
Notification: Performance of FrontEnd - DAE generated: time 3.677e-06/0.1811, allocations: 0 / 0.5402 GB, free: 13.67 MB / 410.7 MB
Notification: Performance of FrontEnd: time 1.663e-06/0.1811, allocations: 0 / 0.5402 GB, free: 13.67 MB / 410.7 MB
Notification: Performance of Transformations before backend: time 2.427e-05/0.1811, allocations: 4 kB / 0.5402 GB, free: 13.67 MB / 410.7 MB
Notification: Model statistics after passing the front-end and creating the data structures used by the back-end:
 * Number of equations: 287
 * Number of variables: 287
Notification: Performance of Generate backend data structure: time 0.007102/0.1882, allocations: 2.581 MB / 0.5427 GB, free: 11.04 MB / 410.7 MB
Notification: Performance of prepare preOptimizeDAE: time 4.937e-05/0.1883, allocations: 15.97 kB / 0.5427 GB, free: 11.03 MB / 410.7 MB
Notification: Performance of preOpt normalInlineFunction (simulation): time 0.001742/0.19, allocations: 331.3 kB / 0.5431 GB, free: 10.7 MB / 410.7 MB
Notification: Performance of preOpt evaluateParameters (simulation): time 0.003549/0.1936, allocations: 1.333 MB / 0.5444 GB, free: 9.332 MB / 410.7 MB
Notification: Performance of preOpt simplifyIfEquations (simulation): time 0.0001243/0.1937, allocations: 90.64 kB / 0.5444 GB, free: 9.242 MB / 410.7 MB
Notification: Performance of preOpt expandDerOperator (simulation): time 0.0002871/0.194, allocations: 120.1 kB / 0.5446 GB, free: 9.125 MB / 410.7 MB
Notification: Performance of preOpt clockPartitioning (simulation): time 0.00338/0.1974, allocations: 1.302 MB / 0.5458 GB, free: 7.781 MB / 410.7 MB
Notification: Performance of preOpt findStateOrder (simulation): time 3.225e-05/0.1974, allocations: 0 / 0.5458 GB, free: 7.781 MB / 410.7 MB
Notification: Performance of preOpt replaceEdgeChange (simulation): time 0.0001555/0.1975, allocations: 48 kB / 0.5459 GB, free: 7.734 MB / 410.7 MB
Notification: Performance of preOpt inlineArrayEqn (simulation): time 3.809e-05/0.1976, allocations: 28 kB / 0.5459 GB, free: 7.707 MB / 410.7 MB
Notification: Performance of preOpt removeEqualRHS (simulation): time 0.002839/0.2004, allocations: 1.047 MB / 0.5469 GB, free: 6.652 MB / 410.7 MB
Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.01119/0.2116, allocations: 3.705 MB / 0.5505 GB, free: 2.887 MB / 410.7 MB
Notification: Performance of preOpt comSubExp (simulation): time 0.005189/0.2168, allocations: 0.8876 MB / 0.5514 GB, free: 1.98 MB / 410.7 MB
Notification: Performance of preOpt resolveLoops (simulation): time 0.001427/0.2182, allocations: 0.5888 MB / 0.552 GB, free: 1.387 MB / 410.7 MB
Notification: Performance of preOpt evalFunc (simulation): time 8.329e-05/0.2183, allocations: 20.98 kB / 0.552 GB, free: 1.367 MB / 410.7 MB
Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 5.156e-05/0.2184, allocations: 39.56 kB / 0.552 GB, free: 1.32 MB / 410.7 MB
Notification: Performance of pre-optimization done (n=98): time 3.717e-06/0.2184, allocations: 0 / 0.552 GB, free: 1.32 MB / 410.7 MB
Notification: Performance of matching and sorting (n=161): time 0.3382/0.5566, allocations: 15.31 MB / 0.567 GB, free: 43.15 MB / 410.7 MB
Notification: Performance of inlineWhenForInitialization (initialization): time 7.306e-05/0.5567, allocations: 99.91 kB / 0.5671 GB, free: 43.05 MB / 410.7 MB
Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.002968/0.5596, allocations: 1.696 MB / 0.5687 GB, free: 42.12 MB / 410.7 MB
Notification: Performance of collectPreVariables (initialization): time 0.0002753/0.5599, allocations: 53.05 kB / 0.5688 GB, free: 42.07 MB / 410.7 MB
Notification: Performance of collectInitialEqns (initialization): time 0.0005658/0.5605, allocations: 0.907 MB / 0.5697 GB, free: 41.33 MB / 410.7 MB
Notification: Performance of collectInitialBindings (initialization): time 0.0004677/0.5609, allocations: 0.5656 MB / 0.5702 GB, free: 40.91 MB / 410.7 MB
Notification: Performance of simplifyInitialFunctions (initialization): time 0.0006023/0.5615, allocations: 340.2 kB / 0.5706 GB, free: 40.72 MB / 410.7 MB
Notification: Performance of setup shared object (initialization): time 6.264e-05/0.5616, allocations: 310.6 kB / 0.5709 GB, free: 40.42 MB / 410.7 MB
Notification: Performance of preBalanceInitialSystem (initialization): time 0.001491/0.5631, allocations: 1.061 MB / 0.5719 GB, free: 39.88 MB / 410.7 MB
Notification: Performance of partitionIndependentBlocks (initialization): time 0.001493/0.5646, allocations: 1.472 MB / 0.5733 GB, free: 38.85 MB / 410.7 MB
Notification: Performance of analyzeInitialSystem (initialization): time 0.003066/0.5677, allocations: 2.717 MB / 0.576 GB, free: 37.04 MB / 410.7 MB
Notification: Performance of solveInitialSystemEqSystem (initialization): time 7.744e-06/0.5677, allocations: 0 / 0.576 GB, free: 37.04 MB / 410.7 MB
Notification: Performance of matching and sorting (n=236) (initialization): time 0.01662/0.5843, allocations: 5.401 MB / 0.5813 GB, free: 31.64 MB / 410.7 MB
Notification: Performance of prepare postOptimizeDAE: time 3.458e-05/0.5843, allocations: 12 kB / 0.5813 GB, free: 31.62 MB / 410.7 MB
Notification: Performance of postOpt simplifyComplexFunction (initialization): time 2.301e-05/0.5843, allocations: 12 kB / 0.5813 GB, free: 31.61 MB / 410.7 MB
Notification: Performance of postOpt tearingSystem (initialization): time 0.01767/0.602, allocations: 3.616 MB / 0.5848 GB, free: 28.02 MB / 410.7 MB
Notification: Performance of postOpt solveSimpleEquations (initialization): time 0.0009543/0.603, allocations: 235.6 kB / 0.585 GB, free: 27.79 MB / 410.7 MB
Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 0.03036/0.6333, allocations: 19.89 MB / 0.6045 GB, free: 7.727 MB / 410.7 MB
Notification: Performance of postOpt simplifyAllExpressions (initialization): time 0.002121/0.6354, allocations: 98.62 kB / 0.6046 GB, free: 7.633 MB / 410.7 MB
Notification: Performance of postOpt collapseArrayExpressions (initialization): time 0.0001615/0.6356, allocations: 72.48 kB / 0.6046 GB, free: 7.562 MB / 410.7 MB
Notification: Model statistics after passing the back-end for initialization:
 * Number of independent subsystems: 52
 * Number of states: 0 ()
 * Number of discrete variables: 0 ()
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for initialization (120):
 * Single equations (assignments): 118
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 0
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 2
 * Mixed (continuous/discrete) equation systems: 0
Notification: Torn system details for strict tearing set:
 * Linear torn systems (#iteration vars, #inner vars, density): 1 system
   {(3,56,100.0%)}
 * Non-linear torn systems (#iteration vars, #inner vars): 1 system
   {(10,49)}
Notification: Performance of prepare postOptimizeDAE: time 0.0007202/0.6363, allocations: 450.2 kB / 0.605 GB, free: 7.121 MB / 410.7 MB
Notification: Performance of postOpt lateInlineFunction (simulation): time 0.00031/0.6366, allocations: 218.5 kB / 0.6053 GB, free: 6.906 MB / 410.7 MB
Notification: Performance of postOpt wrapFunctionCalls (simulation): time 0.0008479/0.6375, allocations: 333.9 kB / 0.6056 GB, free: 6.578 MB / 410.7 MB
Notification: Performance of postOpt inlineArrayEqn (simulation): time 1.021e-05/0.6375, allocations: 16 kB / 0.6056 GB, free: 6.562 MB / 410.7 MB
Notification: Performance of postOpt constantLinearSystem (simulation): time 6.472e-05/0.6376, allocations: 12 kB / 0.6056 GB, free: 6.551 MB / 410.7 MB
Notification: Performance of postOpt simplifysemiLinear (simulation): time 1.261e-05/0.6376, allocations: 7.969 kB / 0.6056 GB, free: 6.543 MB / 410.7 MB
Notification: Performance of postOpt removeSimpleEquations (simulation): time 0.002053/0.6396, allocations: 1.643 MB / 0.6072 GB, free: 4.902 MB / 410.7 MB
Notification: Performance of postOpt simplifyComplexFunction (simulation): time 6.001e-06/0.6396, allocations: 0 / 0.6072 GB, free: 4.902 MB / 410.7 MB
Notification: Performance of postOpt solveSimpleEquations (simulation): time 0.0003927/0.64, allocations: 99.88 kB / 0.6073 GB, free: 4.805 MB / 410.7 MB
Notification: Performance of postOpt tearingSystem (simulation): time 0.01706/0.6571, allocations: 3.443 MB / 0.6107 GB, free: 1.379 MB / 410.7 MB
Notification: Performance of postOpt inputDerivativesUsed (simulation): time 0.0002974/0.6574, allocations: 30.81 kB / 0.6107 GB, free: 1.352 MB / 410.7 MB
Notification: Performance of postOpt calculateStrongComponentJacobians (simulation): time 0.05764/0.715, allocations: 19.94 MB / 0.6302 GB, free: 13.21 MB / 442.7 MB
Notification: Performance of postOpt calculateStateSetsJacobians (simulation): time 3.317e-06/0.715, allocations: 0 / 0.6302 GB, free: 13.21 MB / 442.7 MB
Notification: Performance of postOpt symbolicJacobian (simulation): time 0.03066/0.7457, allocations: 6.833 MB / 0.6369 GB, free: 6.363 MB / 442.7 MB
Notification: Performance of postOpt removeConstants (simulation): time 0.001883/0.7476, allocations: 456.3 kB / 0.6373 GB, free: 5.914 MB / 442.7 MB
Notification: Performance of postOpt simplifyTimeIndepFuncCalls (simulation): time 0.0005402/0.7481, allocations: 24 kB / 0.6373 GB, free: 5.891 MB / 442.7 MB
Notification: Performance of postOpt simplifyAllExpressions (simulation): time 0.001554/0.7497, allocations: 66.16 kB / 0.6374 GB, free: 5.828 MB / 442.7 MB
Notification: Performance of postOpt findZeroCrossings (simulation): time 0.0007729/0.7504, allocations: 158 kB / 0.6375 GB, free: 5.672 MB / 442.7 MB
Notification: Performance of postOpt collapseArrayExpressions (simulation): time 0.0001206/0.7506, allocations: 39.92 kB / 0.6376 GB, free: 5.633 MB / 442.7 MB
Notification: Performance of sorting global known variables: time 0.001885/0.7524, allocations: 1.108 MB / 0.6386 GB, free: 4.504 MB / 442.7 MB
Notification: Performance of sort global known variables: time 6e-08/0.7524, allocations: 0 / 0.6386 GB, free: 4.504 MB / 442.7 MB
Notification: Performance of remove unused functions: time 0.003232/0.7557, allocations: 0.9178 MB / 0.6395 GB, free: 3.59 MB / 442.7 MB
Notification: Model statistics after passing the back-end for simulation:
 * Number of independent subsystems: 2
 * Number of states: 1 (hemoglobinConservationLaw.state[1])
 * Number of discrete variables: 0 ()
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for simulation (45):
 * Single equations (assignments): 43
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 0
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 2
 * Mixed (continuous/discrete) equation systems: 0
Notification: Torn system details for strict tearing set:
 * Linear torn systems (#iteration vars, #inner vars, density): 1 system
   {(6,53,86.1%)}
 * Non-linear torn systems (#iteration vars, #inner vars): 1 system
   {(10,49)}
Notification: Performance of Backend phase and start with SimCode phase: time 0.0003428/0.756, allocations: 127.1 kB / 0.6397 GB, free: 3.457 MB / 442.7 MB
Notification: Performance of simCode: created initialization part: time 0.009951/0.766, allocations: 3.731 MB / 0.6433 GB, free: 15.71 MB / 458.7 MB
Notification: Performance of simCode: created event and clocks part: time 4.699e-06/0.766, allocations: 0 / 0.6433 GB, free: 15.71 MB / 458.7 MB
Notification: Performance of simCode: created simulation system equations: time 0.007947/0.7739, allocations: 2.496 MB / 0.6457 GB, free: 13.19 MB / 458.7 MB
Notification: Performance of simCode: created of all other equations (e.g. parameter, nominal, assert, etc): time 0.002328/0.7762, allocations: 354.7 kB / 0.6461 GB, free: 12.85 MB / 458.7 MB
Notification: Performance of simCode: created linear, non-linear and system jacobian parts: time 0.008282/0.7845, allocations: 3.951 MB / 0.6499 GB, free: 8.887 MB / 458.7 MB
Notification: Performance of simCode: some other stuff during SimCode phase: time 0.001427/0.786, allocations: 1.042 MB / 0.651 GB, free: 7.809 MB / 458.7 MB
Notification: Performance of simCode: alias equations: time 0.0007513/0.7867, allocations: 178.1 kB / 0.6511 GB, free: 7.637 MB / 458.7 MB
Notification: Performance of simCode: all other stuff during SimCode phase: time 0.0002416/0.787, allocations: 87.42 kB / 0.6512 GB, free: 7.551 MB / 458.7 MB
Notification: Performance of SimCode: time 1.382e-06/0.787, allocations: 0 / 0.6512 GB, free: 7.551 MB / 458.7 MB
Notification: Performance of Templates: time 0.1145/0.9015, allocations: 70.82 MB / 0.7204 GB, free: 0.8164 MB / 0.5105 GB
"
[Timeout remaining time 659]
make -j1 -f Bodylight_Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.makefile [Timeout 660]
(rm -f Bodylight_Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.pipe ; mkfifo Bodylight_Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.pipe ; head -c 1048576 < Bodylight_Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.pipe >> ../files/Bodylight_Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.sim & ./Bodylight_Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC -abortSlowSimulation -alarm=240  -lv LOG_STATS > Bodylight_Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.pipe 2>&1) [Timeout 240]
[Calling os._exit(0), Time elapsed: 9.352426322642714]