Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr Chemical_master_Chemical.Obsolete.Examples.Hemoglobin.Joels57.conf.json
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo): time 0.001484/0.001484, allocations: 99.64 kB / 18.94 MB, free: 2.551 MB / 14.72 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo): time 0.001665/0.001665, allocations: 215.8 kB / 22.25 MB, free: 4.859 MB / 14.72 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo): time 1.451/1.451, allocations: 230.6 MB / 256 MB, free: 7.785 MB / 206.1 MB
"
[Timeout remaining time 178]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/package.mo): time 0.1434/0.1434, allocations: 23.99 MB / 336.4 MB, free: 10.86 MB / 270.1 MB
"
[Timeout remaining time 180]
Using package Chemical with version 2.0.1 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/package.mo)
Using package Modelica with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo)
Using package Complex with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo)
Using package ModelicaServices with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo)
Running command: "" <> buildModelFMU(Chemical.Obsolete.Examples.Hemoglobin.Joels57,fileNamePrefix="Chemical_master_Chemical_Obsolete_Examples_Hemoglobin_Joels57",fmuType="me",version="2.0",platforms={"static"})
"" <> buildModelFMU(Chemical.Obsolete.Examples.Hemoglobin.Joels57,fileNamePrefix="Chemical_master_Chemical_Obsolete_Examples_Hemoglobin_Joels57",fmuType="me",version="2.0",platforms={"static"}) [Timeout 660]
"Notification: Chemical requested package Modelica of version 4.0.0. Modelica 4.1.0 is used instead which states that it is fully compatible without conversion script needed.
Notification: Performance of FrontEnd - loaded program: time 0.002112/0.002112, allocations: 71.89 kB / 471.3 MB, free: 7.355 MB / 334.1 MB
Notification: Performance of FrontEnd - Absyn->SCode: time 0.3291/0.3313, allocations: 59.9 MB / 0.5187 GB, free: 9.492 MB / 382.1 MB
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Obsolete.mo:14335:7-14335:66:writable] Warning: An inner declaration for outer component system could not be found and was automatically generated.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Obsolete.mo:14335:7-14335:66:writable] Notification: The diagnostics message for the missing inner is: 
Your model is using an outer \"system\" component but
an inner \"system\" component is not defined.
For simulation drag Modelica.Fluid.System into your model
to specify system properties.
Notification: Performance of NFInst.instantiate(Chemical.Obsolete.Examples.Hemoglobin.Joels57): time 0.1286/0.4598, allocations: 74.38 MB / 0.5914 GB, free: 15.25 MB / 446.1 MB
Notification: Performance of NFInst.instExpressions: time 0.5366/0.9964, allocations: 191.2 MB / 0.7781 GB, free: 16.24 MB / 0.5606 GB
Notification: Performance of NFInst.updateImplicitVariability: time 0.01499/1.011, allocations: 226.5 kB / 0.7784 GB, free: 16.24 MB / 0.5606 GB
Notification: Performance of NFTyping.typeComponents: time 0.01389/1.025, allocations: 4.453 MB / 0.7827 GB, free: 16.21 MB / 0.5606 GB
Notification: Performance of NFTyping.typeBindings: time 0.05137/1.077, allocations: 17.87 MB / 0.8001 GB, free: 15.59 MB / 0.5606 GB
Notification: Performance of NFTyping.typeClassSections: time 0.07427/1.151, allocations: 32.66 MB / 0.832 GB, free: 15.93 MB / 0.5762 GB
Notification: Performance of NFFlatten.flatten: time 0.09894/1.25, allocations: 89.11 MB / 0.9191 GB, free: 1.984 MB / 0.6387 GB
Notification: Performance of NFFlatten.resolveConnections: time 0.08692/1.337, allocations: 51.84 MB / 0.9697 GB, free: 24 kB / 0.6856 GB
Notification: Performance of NFEvalConstants.evaluate: time 0.7979/2.135, allocations: 56.59 MB / 1.025 GB, free: 43.45 MB / 0.7169 GB
Notification: Performance of NFSimplifyModel.simplify: time 0.09783/2.233, allocations: 54.22 MB / 1.078 GB, free: 40.63 MB / 0.7169 GB
Notification: Performance of NFPackage.collectConstants: time 0.04163/2.274, allocations: 12.2 MB / 1.09 GB, free: 40.63 MB / 0.7169 GB
Notification: Performance of NFFlatten.collectFunctions: time 0.1149/2.389, allocations: 33.89 MB / 1.123 GB, free: 30.99 MB / 0.7169 GB
Notification: Performance of NFScalarize.scalarize: time 0.04893/2.438, allocations: 24.03 MB / 1.146 GB, free: 11.45 MB / 0.7169 GB
Notification: Performance of NFVerifyModel.verify: time 0.1315/2.57, allocations: 39.4 MB / 1.185 GB, free: 12.62 MB / 0.7326 GB
Notification: Performance of NFConvertDAE.convert: time 1.103/3.673, allocations: 159.6 MB / 1.341 GB, free: 108 MB / 0.8264 GB
Notification: Performance of FrontEnd - DAE generated: time 6.011e-06/3.673, allocations: 3.406 kB / 1.341 GB, free: 108 MB / 0.8264 GB
Notification: Performance of FrontEnd: time 1.542e-06/3.673, allocations: 1.562 kB / 1.341 GB, free: 108 MB / 0.8264 GB
Notification: Performance of Transformations before backend: time 0.004299/3.677, allocations: 0 / 1.341 GB, free: 108 MB / 0.8264 GB
Notification: Model statistics after passing the front-end and creating the data structures used by the back-end:
 * Number of equations: 11424
 * Number of variables: 11424
Notification: Performance of Generate backend data structure: time 0.2821/3.959, allocations: 71.68 MB / 1.411 GB, free: 87.56 MB / 0.8264 GB
Notification: Performance of prepare preOptimizeDAE: time 4.734e-05/3.959, allocations: 11.38 kB / 1.411 GB, free: 87.56 MB / 0.8264 GB
Notification: Performance of preOpt introduceOutputAliases (simulation): time 0.0392/3.998, allocations: 5.955 MB / 1.417 GB, free: 86.63 MB / 0.8264 GB
Notification: Performance of preOpt normalInlineFunction (simulation): time 0.08832/4.087, allocations: 11.94 MB / 1.428 GB, free: 81.93 MB / 0.8264 GB
Notification: Performance of preOpt evaluateParameters (simulation): time 0.1154/4.202, allocations: 42.62 MB / 1.47 GB, free: 60.92 MB / 0.8264 GB
Notification: Performance of preOpt simplifyIfEquations (simulation): time 0.006813/4.209, allocations: 9.237 MB / 1.479 GB, free: 50.35 MB / 0.8264 GB
Notification: Performance of preOpt expandDerOperator (simulation): time 0.0481/4.257, allocations: 4.598 MB / 1.483 GB, free: 45.75 MB / 0.8264 GB
Notification: Performance of preOpt clockPartitioning (simulation): time 0.3334/4.591, allocations: 112.9 MB / 1.594 GB, free: 12.19 MB / 0.9045 GB
Notification: Performance of preOpt findStateOrder (simulation): time 0.002471/4.593, allocations: 30.75 kB / 1.594 GB, free: 12.18 MB / 0.9045 GB
Notification: Performance of preOpt replaceEdgeChange (simulation): time 0.05093/4.644, allocations: 1.758 MB / 1.595 GB, free: 10.42 MB / 0.9045 GB
Notification: Performance of preOpt inlineArrayEqn (simulation): time 0.001696/4.646, allocations: 1.059 MB / 1.596 GB, free: 9.359 MB / 0.9045 GB
Notification: Performance of preOpt removeEqualRHS (simulation): time 0.7148/5.36, allocations: 153 MB / 1.746 GB, free: 331.9 MB / 0.9358 GB
Warning: The model contains alias variables with redundant start and/or conflicting nominal values. It is recommended to resolve the conflicts, because otherwise the system could be hard to solve. To print the conflicting alias sets and the chosen candidates please use -d=aliasConflicts.
Notification: Performance of preOpt removeSimpleEquations (simulation): time 1.283/6.644, allocations: 394.7 MB / 2.131 GB, free: 277.3 MB / 0.9358 GB
Notification: Performance of preOpt comSubExp (simulation): time 2.181/8.824, allocations: 0.6474 GB / 2.779 GB, free: 188.4 MB / 0.9358 GB
Notification: Performance of preOpt resolveLoops (simulation): time 0.0994/8.924, allocations: 60.05 MB / 2.837 GB, free: 129.1 MB / 0.9358 GB
Notification: Performance of preOpt evalFunc (simulation): time 0.9319/9.855, allocations: 254.8 MB / 3.086 GB, free: 268.2 MB / 0.9358 GB
Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 0.000282/9.856, allocations: 340.6 kB / 3.087 GB, free: 267.9 MB / 0.9358 GB
Notification: Performance of preOpt simplifyInStream (simulation): time 0.09924/9.955, allocations: 29.34 MB / 3.115 GB, free: 261.1 MB / 0.9358 GB
Notification: Performance of pre-optimization done (n=2985): time 0.0002577/9.955, allocations: 0 / 3.115 GB, free: 261.1 MB / 0.9358 GB
Notification: Performance of matching and sorting (n=3387): time 2.518/12.47, allocations: 423.8 MB / 3.529 GB, free: 252.5 MB / 0.9358 GB
Notification: Performance of inlineWhenForInitialization (initialization): time 0.0002966/12.47, allocations: 449.4 kB / 3.529 GB, free: 252.3 MB / 0.9358 GB
Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.05961/12.53, allocations: 33.04 MB / 3.562 GB, free: 230.6 MB / 0.9358 GB
Notification: Performance of collectPreVariables (initialization): time 0.01574/12.55, allocations: 0.572 MB / 3.562 GB, free: 230 MB / 0.9358 GB
Notification: Performance of collectInitialEqns (initialization): time 0.01734/12.57, allocations: 21.74 MB / 3.583 GB, free: 212.6 MB / 0.9358 GB
Notification: Performance of collectInitialBindings (initialization): time 0.02431/12.59, allocations: 12.41 MB / 3.596 GB, free: 200.3 MB / 0.9358 GB
Notification: Performance of simplifyInitialFunctions (initialization): time 0.05362/12.64, allocations: 9.934 MB / 3.605 GB, free: 190.3 MB / 0.9358 GB
Notification: Performance of setup shared object (initialization): time 4.239e-05/12.64, allocations: 301.1 kB / 3.606 GB, free: 190 MB / 0.9358 GB
Notification: Performance of preBalanceInitialSystem (initialization): time 0.06433/12.71, allocations: 39.04 MB / 3.644 GB, free: 151 MB / 0.9358 GB
Notification: Performance of partitionIndependentBlocks (initialization): time 0.07855/12.79, allocations: 53.25 MB / 3.696 GB, free: 91.52 MB / 0.9358 GB
Notification: Performance of analyzeInitialSystem (initialization): time 0.6162/13.4, allocations: 96.37 MB / 3.79 GB, free: 267.8 MB / 0.9358 GB
Notification: Performance of solveInitialSystemEqSystem (initialization): time 0.0005001/13.4, allocations: 125.8 kB / 3.79 GB, free: 267.8 MB / 0.9358 GB
Notification: Performance of matching and sorting (n=5667) (initialization): time 1.36/14.76, allocations: 257.3 MB / 4.041 GB, free: 119.4 MB / 0.9358 GB
Notification: Performance of prepare postOptimizeDAE: time 0.0004792/14.76, allocations: 196 kB / 4.041 GB, free: 119.2 MB / 0.9358 GB
Notification: Performance of postOpt simplifyComplexFunction (initialization): time 0.0007994/14.77, allocations: 444 kB / 4.042 GB, free: 118.7 MB / 0.9358 GB
Notification: Performance of postOpt tearingSystem (initialization): time 0.175/14.94, allocations: 73.7 MB / 4.114 GB, free: 45.27 MB / 0.9358 GB
Notification: Performance of postOpt solveSimpleEquations (initialization): time 0.0539/14.99, allocations: 11.18 MB / 4.125 GB, free: 34.08 MB / 0.9358 GB
Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 1.108/16.1, allocations: 309.8 MB / 4.427 GB, free: 107.8 MB / 0.9358 GB
Notification: Performance of postOpt simplifyAllExpressions (initialization): time 0.0581/16.16, allocations: 2.484 MB / 4.43 GB, free: 105.3 MB / 0.9358 GB
Notification: Performance of postOpt collapseArrayExpressions (initialization): time 0.01764/16.18, allocations: 2.795 MB / 4.432 GB, free: 102.5 MB / 0.9358 GB
Notification: Model statistics after passing the back-end for initialization:
 * Number of independent subsystems: 2031
 * Number of states: 0 ()
 * Number of discrete variables: 0 ()
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for initialization (5523):
 * Single equations (assignments): 5514
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 0
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 9
 * Mixed (continuous/discrete) equation systems: 0
Notification: Torn system details for strict tearing set:
 * Linear torn systems (#iteration vars, #inner vars, density): 6 systems
   {(1,3,100.0%), (33,10,82.4%), (1,3,100.0%), (33,10,82.4%), (1,3,100.0%), (33,10,82.4%)}
 * Non-linear torn systems (#iteration vars, #inner vars): 3 systems
   {(1,3), (1,3), (1,3)}
Notification: Performance of prepare postOptimizeDAE: time 0.05212/16.23, allocations: 18.33 MB / 4.45 GB, free: 84.95 MB / 0.9358 GB
Notification: Performance of postOpt lateInlineFunction (simulation): time 0.0243/16.25, allocations: 3.322 MB / 4.454 GB, free: 83.48 MB / 0.9358 GB
Notification: Performance of postOpt wrapFunctionCalls (simulation): time 1.279/17.53, allocations: 152.4 MB / 4.602 GB, free: 259.7 MB / 0.9358 GB
Notification: Performance of postOpt inlineArrayEqn (simulation): time 0.0003606/17.53, allocations: 356.3 kB / 4.603 GB, free: 259.7 MB / 0.9358 GB
Notification: Performance of postOpt constantLinearSystem (simulation): time 0.0005258/17.53, allocations: 58.91 kB / 4.603 GB, free: 259.7 MB / 0.9358 GB
Notification: Performance of postOpt simplifysemiLinear (simulation): time 0.001086/17.54, allocations: 181.1 kB / 4.603 GB, free: 259.7 MB / 0.9358 GB
Notification: Performance of postOpt removeSimpleEquations (simulation): time 1.014/18.55, allocations: 228.7 MB / 4.826 GB, free: 95.59 MB / 0.9358 GB
Notification: Performance of postOpt simplifyComplexFunction (simulation): time 0.000397/18.55, allocations: 15.06 kB / 4.826 GB, free: 95.58 MB / 0.9358 GB
Notification: Performance of postOpt solveSimpleEquations (simulation): time 0.04772/18.6, allocations: 7.252 MB / 4.834 GB, free: 88.32 MB / 0.9358 GB
Notification: Performance of postOpt tearingSystem (simulation): time 0.1019/18.7, allocations: 39.75 MB / 4.872 GB, free: 48.85 MB / 0.9358 GB
Notification: Performance of postOpt inputDerivativesUsed (simulation): time 0.01462/18.71, allocations: 1.452 MB / 4.874 GB, free: 47.39 MB / 0.9358 GB
Notification: Performance of postOpt calculateStrongComponentJacobians (simulation): time 0.8266/19.54, allocations: 155.8 MB / 5.026 GB, free: 227.2 MB / 0.9358 GB
Notification: Performance of postOpt calculateStateSetsJacobians (simulation): time 1.335e-05/19.54, allocations: 20.92 kB / 5.026 GB, free: 227.2 MB / 0.9358 GB
Notification: Performance of postOpt symbolicJacobian (simulation): time 0.9112/20.45, allocations: 200.4 MB / 5.222 GB, free: 77 MB / 0.9358 GB
Notification: Performance of postOpt removeConstants (simulation): time 0.04561/20.5, allocations: 11.55 MB / 5.233 GB, free: 67.42 MB / 0.9358 GB
Notification: Performance of postOpt simplifyTimeIndepFuncCalls (simulation): time 0.02166/20.52, allocations: 0.9138 MB / 5.234 GB, free: 66.5 MB / 0.9358 GB
Notification: Performance of postOpt simplifyAllExpressions (simulation): time 0.0482/20.57, allocations: 1.545 MB / 5.235 GB, free: 64.96 MB / 0.9358 GB
Notification: Performance of postOpt findZeroCrossings (simulation): time 0.02683/20.59, allocations: 4.686 MB / 5.24 GB, free: 60.26 MB / 0.9358 GB
Notification: Performance of postOpt collapseArrayExpressions (simulation): time 0.01415/20.61, allocations: 1.388 MB / 5.241 GB, free: 58.87 MB / 0.9358 GB
Notification: Performance of sorting global known variables: time 0.045/20.65, allocations: 22.46 MB / 5.263 GB, free: 36.56 MB / 0.9358 GB
Notification: Performance of sort global known variables: time 3.81e-07/20.65, allocations: 4 kB / 5.263 GB, free: 36.55 MB / 0.9358 GB
Notification: Performance of remove unused functions: time 0.1048/20.76, allocations: 20.25 MB / 5.283 GB, free: 16.52 MB / 0.9358 GB
Notification: Model statistics after passing the back-end for simulation:
 * Number of independent subsystems: 45
 * Number of states: 180 (pCO2_2000.solution.temperature,pCO2_2000.O2_free.logn,pCO2_2000.H2O.logn,pCO2_2000.relaxed.OxyHm[1].logn,pCO2_2000.relaxed.OxyHm[2].logn,pCO2_2000.relaxed.OxyHm[3].logn,pCO2_2000.relaxed.OxyHm[4].logn,pCO2_2000.relaxed.DeoxyHm[1].logn,pCO2_2000.relaxed.DeoxyHm[2].logn,pCO2_2000.relaxed.DeoxyHm[3].logn,pCO2_2000.relaxed.DeoxyHm[4].logn,pCO2_2000.relaxed.HmAH[1].logn,pCO2_2000.relaxed.HmAH[2].logn,pCO2_2000.relaxed.HmAH[3].logn,pCO2_2000.relaxed.HmAH[4].logn,pCO2_2000.relaxed.HmA[1].logn,pCO2_2000.relaxed.HmA[2].logn,pCO2_2000.relaxed.HmA[3].logn,pCO2_2000.relaxed.HmA[4].logn,pCO2_2000.relaxed.HmNH3[1].logn,pCO2_2000.relaxed.HmNH3[2].logn,pCO2_2000.relaxed.HmNH3[3].logn,pCO2_2000.relaxed.HmNH3[4].logn,pCO2_2000.relaxed.HmNH2[1].logn,pCO2_2000.relaxed.HmNH2[2].logn,pCO2_2000.relaxed.HmNH2[3].logn,pCO2_2000.relaxed.HmNH2[4].logn,pCO2_2000.relaxed.HmNHCOO[1].logn,pCO2_2000.relaxed.HmNHCOO[2].logn,pCO2_2000.relaxed.HmNHCOO[3].logn,pCO2_2000.relaxed.HmNHCOO[4].logn,pCO2_2000.tensed.OxyHm[1].logn,pCO2_2000.tensed.OxyHm[2].logn,pCO2_2000.tensed.OxyHm[3].logn,pCO2_2000.tensed.OxyHm[4].logn,pCO2_2000.tensed.DeoxyHm[1].logn,pCO2_2000.tensed.DeoxyHm[2].logn,pCO2_2000.tensed.DeoxyHm[3].logn,pCO2_2000.tensed.DeoxyHm[4].logn,pCO2_2000.tensed.HmAH[1].logn,pCO2_2000.tensed.HmAH[2].logn,pCO2_2000.tensed.HmAH[3].logn,pCO2_2000.tensed.HmAH[4].logn,pCO2_2000.tensed.HmA[1].logn,pCO2_2000.tensed.HmA[2].logn,pCO2_2000.tensed.HmA[3].logn,pCO2_2000.tensed.HmA[4].logn,pCO2_2000.tensed.HmNH3[1].logn,pCO2_2000.tensed.HmNH3[2].logn,pCO2_2000.tensed.HmNH3[3].logn,pCO2_2000.tensed.HmNH3[4].logn,pCO2_2000.tensed.HmNH2[1].logn,pCO2_2000.tensed.HmNH2[2].logn,pCO2_2000.tensed.HmNH2[3].logn,pCO2_2000.tensed.HmNH2[4].logn,pCO2_2000.tensed.HmNHCOO[1].logn,pCO2_2000.tensed.HmNHCOO[2].logn,pCO2_2000.tensed.HmNHCOO[3].logn,pCO2_2000.tensed.HmNHCOO[4].logn,pCO2_2000.CO2_free.logn,pCO2_5330.solution.temperature,pCO2_5330.O2_free.logn,pCO2_5330.H2O.logn,pCO2_5330.relaxed.OxyHm[1].logn,pCO2_5330.relaxed.OxyHm[2].logn,pCO2_5330.relaxed.OxyHm[3].logn,pCO2_5330.relaxed.OxyHm[4].logn,pCO2_5330.relaxed.DeoxyHm[1].logn,pCO2_5330.relaxed.DeoxyHm[2].logn,pCO2_5330.relaxed.DeoxyHm[3].logn,pCO2_5330.relaxed.DeoxyHm[4].logn,pCO2_5330.relaxed.HmAH[1].logn,pCO2_5330.relaxed.HmAH[2].logn,pCO2_5330.relaxed.HmAH[3].logn,pCO2_5330.relaxed.HmAH[4].logn,pCO2_5330.relaxed.HmA[1].logn,pCO2_5330.relaxed.HmA[2].logn,pCO2_5330.relaxed.HmA[3].logn,pCO2_5330.relaxed.HmA[4].logn,pCO2_5330.relaxed.HmNH3[1].logn,pCO2_5330.relaxed.HmNH3[2].logn,pCO2_5330.relaxed.HmNH3[3].logn,pCO2_5330.relaxed.HmNH3[4].logn,pCO2_5330.relaxed.HmNH2[1].logn,pCO2_5330.relaxed.HmNH2[2].logn,pCO2_5330.relaxed.HmNH2[3].logn,pCO2_5330.relaxed.HmNH2[4].logn,pCO2_5330.relaxed.HmNHCOO[1].logn,pCO2_5330.relaxed.HmNHCOO[2].logn,pCO2_5330.relaxed.HmNHCOO[3].logn,pCO2_5330.relaxed.HmNHCOO[4].logn,pCO2_5330.tensed.OxyHm[1].logn,pCO2_5330.tensed.OxyHm[2].logn,pCO2_5330.tensed.OxyHm[3].logn,pCO2_5330.tensed.OxyHm[4].logn,pCO2_5330.tensed.DeoxyHm[1].logn,pCO2_5330.tensed.DeoxyHm[2].logn,pCO2_5330.tensed.DeoxyHm[3].logn,pCO2_5330.tensed.DeoxyHm[4].logn,pCO2_5330.tensed.HmAH[1].logn,pCO2_5330.tensed.HmAH[2].logn,pCO2_5330.tensed.HmAH[3].logn,pCO2_5330.tensed.HmAH[4].logn,pCO2_5330.tensed.HmA[1].logn,pCO2_5330.tensed.HmA[2].logn,pCO2_5330.tensed.HmA[3].logn,pCO2_5330.tensed.HmA[4].logn,pCO2_5330.tensed.HmNH3[1].logn,pCO2_5330.tensed.HmNH3[2].logn,pCO2_5330.tensed.HmNH3[3].logn,pCO2_5330.tensed.HmNH3[4].logn,pCO2_5330.tensed.HmNH2[1].logn,pCO2_5330.tensed.HmNH2[2].logn,pCO2_5330.tensed.HmNH2[3].logn,pCO2_5330.tensed.HmNH2[4].logn,pCO2_5330.tensed.HmNHCOO[1].logn,pCO2_5330.tensed.HmNHCOO[2].logn,pCO2_5330.tensed.HmNHCOO[3].logn,pCO2_5330.tensed.HmNHCOO[4].logn,pCO2_5330.CO2_free.logn,pCO2_9330.solution.temperature,pCO2_9330.O2_free.logn,pCO2_9330.H2O.logn,pCO2_9330.relaxed.OxyHm[1].logn,pCO2_9330.relaxed.OxyHm[2].logn,pCO2_9330.relaxed.OxyHm[3].logn,pCO2_9330.relaxed.OxyHm[4].logn,pCO2_9330.relaxed.DeoxyHm[1].logn,pCO2_9330.relaxed.DeoxyHm[2].logn,pCO2_9330.relaxed.DeoxyHm[3].logn,pCO2_9330.relaxed.DeoxyHm[4].logn,pCO2_9330.relaxed.HmAH[1].logn,pCO2_9330.relaxed.HmAH[2].logn,pCO2_9330.relaxed.HmAH[3].logn,pCO2_9330.relaxed.HmAH[4].logn,pCO2_9330.relaxed.HmA[1].logn,pCO2_9330.relaxed.HmA[2].logn,pCO2_9330.relaxed.HmA[3].logn,pCO2_9330.relaxed.HmA[4].logn,pCO2_9330.relaxed.HmNH3[1].logn,pCO2_9330.relaxed.HmNH3[2].logn,pCO2_9330.relaxed.HmNH3[3].logn,pCO2_9330.relaxed.HmNH3[4].logn,pCO2_9330.relaxed.HmNH2[1].logn,pCO2_9330.relaxed.HmNH2[2].logn,pCO2_9330.relaxed.HmNH2[3].logn,pCO2_9330.relaxed.HmNH2[4].logn,pCO2_9330.relaxed.HmNHCOO[1].logn,pCO2_9330.relaxed.HmNHCOO[2].logn,pCO2_9330.relaxed.HmNHCOO[3].logn,pCO2_9330.relaxed.HmNHCOO[4].logn,pCO2_9330.tensed.OxyHm[1].logn,pCO2_9330.tensed.OxyHm[2].logn,pCO2_9330.tensed.OxyHm[3].logn,pCO2_9330.tensed.OxyHm[4].logn,pCO2_9330.tensed.DeoxyHm[1].logn,pCO2_9330.tensed.DeoxyHm[2].logn,pCO2_9330.tensed.DeoxyHm[3].logn,pCO2_9330.tensed.DeoxyHm[4].logn,pCO2_9330.tensed.HmAH[1].logn,pCO2_9330.tensed.HmAH[2].logn,pCO2_9330.tensed.HmAH[3].logn,pCO2_9330.tensed.HmAH[4].logn,pCO2_9330.tensed.HmA[1].logn,pCO2_9330.tensed.HmA[2].logn,pCO2_9330.tensed.HmA[3].logn,pCO2_9330.tensed.HmA[4].logn,pCO2_9330.tensed.HmNH3[1].logn,pCO2_9330.tensed.HmNH3[2].logn,pCO2_9330.tensed.HmNH3[3].logn,pCO2_9330.tensed.HmNH3[4].logn,pCO2_9330.tensed.HmNH2[1].logn,pCO2_9330.tensed.HmNH2[2].logn,pCO2_9330.tensed.HmNH2[3].logn,pCO2_9330.tensed.HmNH2[4].logn,pCO2_9330.tensed.HmNHCOO[1].logn,pCO2_9330.tensed.HmNHCOO[2].logn,pCO2_9330.tensed.HmNHCOO[3].logn,pCO2_9330.tensed.HmNHCOO[4].logn,pCO2_9330.CO2_free.logn)
 * Number of discrete variables: 0 ()
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for simulation (3702):
 * Single equations (assignments): 3693
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 0
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 9
 * Mixed (continuous/discrete) equation systems: 0
Notification: Torn system details for strict tearing set:
 * Linear torn systems (#iteration vars, #inner vars, density): 6 systems
   {(1,3,100.0%), (33,10,82.4%), (1,3,100.0%), (33,10,82.4%), (1,3,100.0%), (33,10,82.4%)}
 * Non-linear torn systems (#iteration vars, #inner vars): 3 systems
   {(1,3), (1,3), (1,3)}
Notification: Performance of Backend phase and start with SimCode phase: time 1.335/22.09, allocations: 211.9 MB / 5.49 GB, free: 197.3 MB / 0.9358 GB
Notification: Performance of simCode: created initialization part: time 0.2113/22.31, allocations: 85.31 MB / 5.573 GB, free: 112.4 MB / 0.9358 GB
Notification: Performance of simCode: created event and clocks part: time 2.078e-05/22.31, allocations: 4 kB / 5.573 GB, free: 112.3 MB / 0.9358 GB
Notification: Performance of simCode: created simulation system equations: time 0.1367/22.44, allocations: 54.53 MB / 5.626 GB, free: 57.75 MB / 0.9358 GB
Notification: Performance of simCode: created of all other equations (e.g. parameter, nominal, assert, etc): time 0.07045/22.51, allocations: 7.825 MB / 5.634 GB, free: 50.23 MB / 0.9358 GB
Notification: Performance of simCode: created linear, non-linear and system jacobian parts: time 4.151/26.66, allocations: 0.8502 GB / 6.484 GB, free: 64.13 MB / 0.9358 GB
Notification: Performance of simCode: some other stuff during SimCode phase: time 0.05392/26.72, allocations: 30.57 MB / 6.514 GB, free: 33.5 MB / 0.9358 GB
Notification: Performance of simCode: alias equations: time 0.06281/26.78, allocations: 15.62 MB / 6.529 GB, free: 18.2 MB / 0.9358 GB
Notification: Performance of simCode: all other stuff during SimCode phase: time 0.4764/27.26, allocations: 22.84 MB / 6.552 GB, free: 265.4 MB / 0.9358 GB
Notification: Performance of SimCode: time 1.243e-06/27.26, allocations: 0 / 6.552 GB, free: 265.4 MB / 0.9358 GB
Notification: Performance of buildModelFMU: Generate the FMI files: time 2.911/30.17, allocations: 1.436 GB / 7.988 GB, free: 73.28 MB / 0.9358 GB
Notification: Performance of buildModelFMU: Generate platform static: time 437.6/467.8, allocations: 15.84 kB / 7.988 GB, free: 73.27 MB / 0.9358 GB
"
[Timeout remaining time 192]
(rm -f Chemical_master_Chemical.Obsolete.Examples.Hemoglobin.Joels57.pipe ; mkfifo Chemical_master_Chemical.Obsolete.Examples.Hemoglobin.Joels57.pipe ; head -c 1048576 < Chemical_master_Chemical.Obsolete.Examples.Hemoglobin.Joels57.pipe >> ../files/Chemical_master_Chemical.Obsolete.Examples.Hemoglobin.Joels57.sim & /home/hudson/saved_omc/OMSimulator/install/bin/OMSimulator  --tempDir=temp_Chemical_master_Chemical_Obsolete_Examples_Hemoglobin_Joels57_fmu --startTime=0 --stopTime=70 --stepSize=0.028 --timeout=50 --tolerance=1e-05 Chemical_master_Chemical_Obsolete_Examples_Hemoglobin_Joels57.fmu > Chemical_master_Chemical.Obsolete.Examples.Hemoglobin.Joels57.pipe 2>&1) [Timeout 52.5]
[Calling os._exit(0), Time elapsed: 477.69285810599104]
Failed to read output from testmodel.py, exit status != 0:
468.5000849161297 468.509010112 464.833266474
Calling exit ...
<OMPython.OMCSessionZMQ object at 0x7f48bb49afb0>