Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr Bodylight_Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.conf.json
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo): time 0.0007539/0.0007539, allocations: 105.5 kB / 18.95 MB, free: 1.184 MB / 13.93 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo): time 0.0008223/0.0008223, allocations: 214.6 kB / 22.25 MB, free: 3.574 MB / 13.93 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo): time 0.9666/0.9666, allocations: 230.6 MB / 256 MB, free: 9.598 MB / 202.7 MB
"
[Timeout remaining time 179]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/package.mo): time 0.06018/0.06018, allocations: 17.16 MB / 329.6 MB, free: 0.7227 MB / 250.7 MB
"
[Timeout remaining time 180]
Using package Bodylight with version 1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/package.mo)
Using package Modelica with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo)
Using package Complex with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo)
Using package ModelicaServices with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo)
Running command: "" <> buildModelFMU(Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC,fileNamePrefix="Bodylight_Bodylight_Chemical_Examples_Hemoglobin_Allosteric_Hemoglobin2_MWC",fmuType="me",version="2.0",platforms={"static"})
"" <> buildModelFMU(Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC,fileNamePrefix="Bodylight_Bodylight_Chemical_Examples_Hemoglobin_Allosteric_Hemoglobin2_MWC",fmuType="me",version="2.0",platforms={"static"}) [Timeout 660]
"Notification: Bodylight requested package Modelica of version 4.0.0. Modelica 4.1.0 is used instead which states that it is fully compatible without conversion script needed.
Notification: Performance of FrontEnd - loaded program: time 0.0009325/0.0009325, allocations: 71.89 kB / 460.2 MB, free: 26.86 MB / 330.7 MB
Notification: Performance of FrontEnd - Absyn->SCode: time 0.09115/0.09208, allocations: 57.76 MB / 0.5058 GB, free: 0.9961 MB / 362.7 MB
Notification: Performance of NFInst.instantiate(Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC): time 0.00498/0.09706, allocations: 5.278 MB / 0.511 GB, free: 11.69 MB / 378.7 MB
Notification: Performance of NFInst.instExpressions: time 0.005663/0.1027, allocations: 5.594 MB / 0.5165 GB, free: 6.074 MB / 378.7 MB
Notification: Performance of NFInst.updateImplicitVariability: time 0.0003325/0.1031, allocations: 47.56 kB / 0.5165 GB, free: 6.027 MB / 378.7 MB
Notification: Performance of NFTyping.typeComponents: time 0.0003222/0.1034, allocations: 178.3 kB / 0.5167 GB, free: 5.852 MB / 378.7 MB
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.OxyRHm.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.OxyRHm.Utilities.readReal' contains a call to impure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.OxyRHm.Utilities.UnitConversions.findUnit'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.DeoxyRHm.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.DeoxyRHm.Utilities.readReal' contains a call to impure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.DeoxyRHm.Utilities.UnitConversions.findUnit'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.OxyTHm.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.OxyTHm.Utilities.readReal' contains a call to impure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.OxyTHm.Utilities.UnitConversions.findUnit'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.DeoxyTHm.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.DeoxyTHm.Utilities.readReal' contains a call to impure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.DeoxyTHm.Utilities.UnitConversions.findUnit'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.oxygen_unbound.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.oxygen_unbound.Utilities.readReal' contains a call to impure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.oxygen_unbound.Utilities.UnitConversions.findUnit'.
Notification: Performance of NFTyping.typeBindings: time 0.001512/0.1049, allocations: 1.007 MB / 0.5177 GB, free: 4.84 MB / 378.7 MB
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.OxyRHm.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.OxyRHm.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.DeoxyRHm.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.DeoxyRHm.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.OxyTHm.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.OxyTHm.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.DeoxyTHm.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.DeoxyTHm.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.oxygen_unbound.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.oxygen_unbound.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
Notification: Performance of NFTyping.typeClassSections: time 0.001325/0.1062, allocations: 1.031 MB / 0.5187 GB, free: 3.82 MB / 378.7 MB
Notification: Performance of NFFlatten.flatten: time 0.001916/0.1081, allocations: 3.14 MB / 0.5217 GB, free: 0.668 MB / 378.7 MB
Notification: Performance of NFFlatten.resolveConnections: time 0.0008127/0.1089, allocations: 0.5662 MB / 0.5223 GB, free: 68 kB / 378.7 MB
Notification: Performance of NFEvalConstants.evaluate: time 0.0008304/0.1098, allocations: 1.203 MB / 0.5235 GB, free: 14.86 MB / 394.7 MB
Notification: Performance of NFSimplifyModel.simplify: time 0.001276/0.1111, allocations: 1.626 MB / 0.525 GB, free: 13.22 MB / 394.7 MB
Notification: Performance of NFPackage.collectConstants: time 0.0002192/0.1113, allocations: 168 kB / 0.5252 GB, free: 13.06 MB / 394.7 MB
Notification: Performance of NFFlatten.collectFunctions: time 0.0003631/0.1116, allocations: 184 kB / 0.5254 GB, free: 12.88 MB / 394.7 MB
Notification: Performance of NFScalarize.scalarize: time 0.0004093/0.112, allocations: 0.6538 MB / 0.526 GB, free: 12.22 MB / 394.7 MB
Notification: Performance of NFVerifyModel.verify: time 0.0006915/0.1127, allocations: 1.061 MB / 0.5271 GB, free: 11.16 MB / 394.7 MB
Notification: Performance of NFConvertDAE.convert: time 0.002127/0.1149, allocations: 3.245 MB / 0.5302 GB, free: 7.898 MB / 394.7 MB
Notification: Performance of FrontEnd - DAE generated: time 3.517e-06/0.1149, allocations: 0 / 0.5302 GB, free: 7.898 MB / 394.7 MB
Notification: Performance of FrontEnd: time 1.843e-06/0.1149, allocations: 4 kB / 0.5302 GB, free: 7.895 MB / 394.7 MB
Notification: Performance of Transformations before backend: time 3.501e-05/0.1149, allocations: 0 / 0.5302 GB, free: 7.895 MB / 394.7 MB
Notification: Model statistics after passing the front-end and creating the data structures used by the back-end:
 * Number of equations: 387
 * Number of variables: 387
Notification: Performance of Generate backend data structure: time 0.004267/0.1192, allocations: 3.492 MB / 0.5336 GB, free: 4.352 MB / 394.7 MB
Notification: Performance of prepare preOptimizeDAE: time 5.745e-05/0.1192, allocations: 8.031 kB / 0.5336 GB, free: 4.344 MB / 394.7 MB
Notification: Performance of preOpt introduceOutputAliases (simulation): time 0.0002344/0.1195, allocations: 227.9 kB / 0.5339 GB, free: 4.109 MB / 394.7 MB
Notification: Performance of preOpt normalInlineFunction (simulation): time 0.0007324/0.1202, allocations: 390.9 kB / 0.5342 GB, free: 3.727 MB / 394.7 MB
Notification: Performance of preOpt evaluateParameters (simulation): time 0.002297/0.1225, allocations: 1.792 MB / 0.536 GB, free: 1.871 MB / 394.7 MB
Notification: Performance of preOpt simplifyIfEquations (simulation): time 7.278e-05/0.1226, allocations: 119.4 kB / 0.5361 GB, free: 1.754 MB / 394.7 MB
Notification: Performance of preOpt expandDerOperator (simulation): time 0.000463/0.123, allocations: 167.9 kB / 0.5363 GB, free: 1.59 MB / 394.7 MB
Notification: Performance of preOpt clockPartitioning (simulation): time 0.002374/0.1254, allocations: 2.21 MB / 0.5384 GB, free: 15.33 MB / 410.7 MB
Notification: Performance of preOpt findStateOrder (simulation): time 2.135e-05/0.1254, allocations: 4 kB / 0.5384 GB, free: 15.32 MB / 410.7 MB
Notification: Performance of preOpt replaceEdgeChange (simulation): time 9.419e-05/0.1255, allocations: 60 kB / 0.5385 GB, free: 15.27 MB / 410.7 MB
Notification: Performance of preOpt inlineArrayEqn (simulation): time 5.359e-05/0.1256, allocations: 70.86 kB / 0.5385 GB, free: 15.2 MB / 410.7 MB
Notification: Performance of preOpt removeEqualRHS (simulation): time 0.002204/0.1278, allocations: 2.014 MB / 0.5405 GB, free: 13.18 MB / 410.7 MB
Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.008213/0.136, allocations: 6.832 MB / 0.5472 GB, free: 6.188 MB / 410.7 MB
Notification: Performance of preOpt comSubExp (simulation): time 0.001449/0.1374, allocations: 1.542 MB / 0.5487 GB, free: 4.574 MB / 410.7 MB
Notification: Performance of preOpt resolveLoops (simulation): time 0.0008853/0.1383, allocations: 0.9371 MB / 0.5496 GB, free: 3.613 MB / 410.7 MB
Notification: Performance of preOpt evalFunc (simulation): time 6.463e-05/0.1384, allocations: 17 kB / 0.5496 GB, free: 3.594 MB / 410.7 MB
Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 3.313e-05/0.1384, allocations: 51.5 kB / 0.5497 GB, free: 3.535 MB / 410.7 MB
Notification: Performance of pre-optimization done (n=118): time 3.126e-06/0.1384, allocations: 0 / 0.5497 GB, free: 3.535 MB / 410.7 MB
Notification: Performance of matching and sorting (n=183): time 0.2542/0.3927, allocations: 28.79 MB / 0.5778 GB, free: 34.02 MB / 410.7 MB
Notification: Performance of inlineWhenForInitialization (initialization): time 4.533e-05/0.3927, allocations: 261.3 kB / 0.578 GB, free: 33.7 MB / 410.7 MB
Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.001853/0.3946, allocations: 2.481 MB / 0.5805 GB, free: 31.22 MB / 410.7 MB
Notification: Performance of collectPreVariables (initialization): time 9.926e-05/0.3947, allocations: 57.7 kB / 0.5805 GB, free: 31.16 MB / 410.7 MB
Notification: Performance of collectInitialEqns (initialization): time 0.0004287/0.3951, allocations: 1.09 MB / 0.5816 GB, free: 30.14 MB / 410.7 MB
Notification: Performance of collectInitialBindings (initialization): time 0.0003436/0.3954, allocations: 0.6593 MB / 0.5822 GB, free: 29.57 MB / 410.7 MB
Notification: Performance of simplifyInitialFunctions (initialization): time 0.0004314/0.3959, allocations: 448.3 kB / 0.5827 GB, free: 29.13 MB / 410.7 MB
Notification: Performance of setup shared object (initialization): time 2.728e-05/0.3959, allocations: 305.1 kB / 0.5829 GB, free: 28.83 MB / 410.7 MB
Notification: Performance of preBalanceInitialSystem (initialization): time 0.001436/0.3973, allocations: 1.737 MB / 0.5846 GB, free: 27.09 MB / 410.7 MB
Notification: Performance of partitionIndependentBlocks (initialization): time 0.001604/0.3989, allocations: 2.375 MB / 0.587 GB, free: 24.43 MB / 410.7 MB
Notification: Performance of analyzeInitialSystem (initialization): time 0.003016/0.402, allocations: 4.27 MB / 0.5911 GB, free: 19.89 MB / 410.7 MB
Notification: Performance of solveInitialSystemEqSystem (initialization): time 7.684e-06/0.402, allocations: 4 kB / 0.5911 GB, free: 19.89 MB / 410.7 MB
Notification: Performance of matching and sorting (n=291) (initialization): time 0.01094/0.4129, allocations: 8.615 MB / 0.5995 GB, free: 11.26 MB / 410.7 MB
Notification: Performance of prepare postOptimizeDAE: time 2.357e-05/0.4129, allocations: 12.12 kB / 0.5996 GB, free: 11.25 MB / 410.7 MB
Notification: Performance of postOpt simplifyComplexFunction (initialization): time 2.227e-05/0.4129, allocations: 26.41 kB / 0.5996 GB, free: 11.22 MB / 410.7 MB
Notification: Performance of postOpt tearingSystem (initialization): time 0.008453/0.4214, allocations: 5.245 MB / 0.6047 GB, free: 5.98 MB / 410.7 MB
Notification: Performance of postOpt solveSimpleEquations (initialization): time 0.0009132/0.4223, allocations: 451.3 kB / 0.6051 GB, free: 5.539 MB / 410.7 MB
Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 0.02648/0.4488, allocations: 24.78 MB / 0.6293 GB, free: 12.57 MB / 442.7 MB
Notification: Performance of postOpt simplifyAllExpressions (initialization): time 0.002/0.4508, allocations: 259.8 kB / 0.6296 GB, free: 12.32 MB / 442.7 MB
Notification: Performance of postOpt collapseArrayExpressions (initialization): time 0.0001338/0.4509, allocations: 95.92 kB / 0.6297 GB, free: 12.23 MB / 442.7 MB
Notification: Model statistics after passing the back-end for initialization:
 * Number of independent subsystems: 89
 * Number of states: 0 ()
 * Number of discrete variables: 0 ()
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for initialization (205):
 * Single equations (assignments): 203
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 0
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 2
 * Mixed (continuous/discrete) equation systems: 0
Notification: Torn system details for strict tearing set:
 * Linear torn systems (#iteration vars, #inner vars, density): 1 system
   {(8,36,34.4%)}
 * Non-linear torn systems (#iteration vars, #inner vars): 1 system
   {(10,34)}
Notification: Performance of prepare postOptimizeDAE: time 0.0009892/0.4519, allocations: 0.8613 MB / 0.6305 GB, free: 11.37 MB / 442.7 MB
Notification: Performance of postOpt lateInlineFunction (simulation): time 0.0002836/0.4522, allocations: 266.3 kB / 0.6308 GB, free: 11.11 MB / 442.7 MB
Notification: Performance of postOpt wrapFunctionCalls (simulation): time 0.0003452/0.4525, allocations: 425.9 kB / 0.6312 GB, free: 10.68 MB / 442.7 MB
Notification: Performance of postOpt inlineArrayEqn (simulation): time 9.668e-06/0.4526, allocations: 20 kB / 0.6312 GB, free: 10.66 MB / 442.7 MB
Notification: Performance of postOpt constantLinearSystem (simulation): time 2.791e-05/0.4526, allocations: 15.94 kB / 0.6312 GB, free: 10.64 MB / 442.7 MB
Notification: Performance of postOpt simplifysemiLinear (simulation): time 1.132e-05/0.4526, allocations: 11.97 kB / 0.6312 GB, free: 10.63 MB / 442.7 MB
Notification: Performance of postOpt removeSimpleEquations (simulation): time 0.01627/0.4689, allocations: 11.9 MB / 0.6428 GB, free: 14.52 MB / 458.7 MB
Notification: Performance of postOpt simplifyComplexFunction (simulation): time 1.309e-05/0.4689, allocations: 16.97 kB / 0.6429 GB, free: 14.51 MB / 458.7 MB
Notification: Performance of postOpt solveSimpleEquations (simulation): time 0.000441/0.4693, allocations: 239.5 kB / 0.6431 GB, free: 14.27 MB / 458.7 MB
Notification: Performance of postOpt tearingSystem (simulation): time 0.008741/0.4781, allocations: 4.997 MB / 0.648 GB, free: 9.281 MB / 458.7 MB
Notification: Performance of postOpt inputDerivativesUsed (simulation): time 0.0001063/0.4782, allocations: 56 kB / 0.648 GB, free: 9.227 MB / 458.7 MB
Notification: Performance of postOpt calculateStrongComponentJacobians (simulation): time 0.02605/0.5042, allocations: 23.78 MB / 0.6712 GB, free: 1.199 MB / 474.7 MB
Notification: Performance of postOpt calculateStateSetsJacobians (simulation): time 1.134e-05/0.5042, allocations: 25.03 kB / 0.6713 GB, free: 1.176 MB / 474.7 MB
Notification: Performance of postOpt symbolicJacobian (simulation): time 0.0137/0.5179, allocations: 10.81 MB / 0.6818 GB, free: 6.137 MB / 490.7 MB
Notification: Performance of postOpt removeConstants (simulation): time 0.001088/0.519, allocations: 0.6392 MB / 0.6824 GB, free: 5.496 MB / 490.7 MB
Notification: Performance of postOpt simplifyTimeIndepFuncCalls (simulation): time 0.0001937/0.5192, allocations: 55.98 kB / 0.6825 GB, free: 5.441 MB / 490.7 MB
Notification: Performance of postOpt simplifyAllExpressions (simulation): time 0.001021/0.5202, allocations: 209.6 kB / 0.6827 GB, free: 5.238 MB / 490.7 MB
Notification: Performance of postOpt findZeroCrossings (simulation): time 0.0004827/0.5207, allocations: 272.1 kB / 0.683 GB, free: 4.973 MB / 490.7 MB
Notification: Performance of postOpt collapseArrayExpressions (simulation): time 8.754e-05/0.5208, allocations: 64 kB / 0.683 GB, free: 4.91 MB / 490.7 MB
Notification: Performance of sorting global known variables: time 0.00158/0.5224, allocations: 1.68 MB / 0.6847 GB, free: 3.219 MB / 490.7 MB
Notification: Performance of sort global known variables: time 1.8e-07/0.5224, allocations: 3.828 kB / 0.6847 GB, free: 3.219 MB / 490.7 MB
Notification: Performance of remove unused functions: time 0.002552/0.5249, allocations: 1.004 MB / 0.6856 GB, free: 2.215 MB / 490.7 MB
Notification: Model statistics after passing the back-end for simulation:
 * Number of independent subsystems: 72
 * Number of states: 7 (totalHb.state[1],T0_in_T.state[3],T0_in_T.state[2],T0_in_T.state[1],R0_in_R.state[3],R0_in_R.state[2],R0_in_R.state[1])
 * Number of discrete variables: 0 ()
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for simulation (111):
 * Single equations (assignments): 109
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 0
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 2
 * Mixed (continuous/discrete) equation systems: 0
Notification: Torn system details for strict tearing set:
 * Linear torn systems (#iteration vars, #inner vars, density): 1 system
   {(8,36,34.4%)}
 * Non-linear torn systems (#iteration vars, #inner vars): 1 system
   {(10,34)}
Notification: Performance of Backend phase and start with SimCode phase: time 0.01453/0.5395, allocations: 11.41 MB / 0.6968 GB, free: 6.574 MB / 0.4948 GB
Notification: Performance of simCode: created initialization part: time 0.00751/0.547, allocations: 5.333 MB / 0.702 GB, free: 1.211 MB / 0.4948 GB
Notification: Performance of simCode: created event and clocks part: time 1.095e-05/0.547, allocations: 4 kB / 0.702 GB, free: 1.207 MB / 0.4948 GB
Notification: Performance of simCode: created simulation system equations: time 0.004606/0.5516, allocations: 3.29 MB / 0.7052 GB, free: 13.9 MB / 0.5105 GB
Notification: Performance of simCode: created of all other equations (e.g. parameter, nominal, assert, etc): time 0.00222/0.5538, allocations: 0.594 MB / 0.7058 GB, free: 13.32 MB / 0.5105 GB
Notification: Performance of simCode: created linear, non-linear and system jacobian parts: time 0.04494/0.5987, allocations: 35.98 MB / 0.7409 GB, free: 8.188 MB / 0.5417 GB
Notification: Performance of simCode: some other stuff during SimCode phase: time 0.001471/0.6002, allocations: 1.55 MB / 0.7424 GB, free: 6.598 MB / 0.5417 GB
Notification: Performance of simCode: alias equations: time 0.001101/0.6013, allocations: 0.5318 MB / 0.743 GB, free: 6.062 MB / 0.5417 GB
Notification: Performance of simCode: all other stuff during SimCode phase: time 0.0007636/0.6021, allocations: 0.9054 MB / 0.7439 GB, free: 5.156 MB / 0.5417 GB
Notification: Performance of SimCode: time 1.293e-06/0.6021, allocations: 0 / 0.7439 GB, free: 5.156 MB / 0.5417 GB
Notification: Performance of buildModelFMU: Generate the FMI files: time 0.4114/1.013, allocations: 104.1 MB / 0.8456 GB, free: 127.9 MB / 0.5573 GB
Notification: Performance of buildModelFMU: Generate platform static: time 11.34/12.35, allocations: 14.58 kB / 0.8456 GB, free: 127.9 MB / 0.5573 GB
"
[Timeout remaining time 648]
(rm -f Bodylight_Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.pipe ; mkfifo Bodylight_Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.pipe ; head -c 1048576 < Bodylight_Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.pipe >> ../files/Bodylight_Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.sim & (cd run_OMSimulator && /home/hudson/saved_omc/OMSimulator/install/bin/OMSimulator  --stripRoot --tempDir=temp_Bodylight_Bodylight_Chemical_Examples_Hemoglobin_Allosteric_Hemoglobin2_MWC_fmu --startTime=0 --stopTime=15000 --stepSize=6 --timeout=50 --tolerance=1e-14 ../Bodylight_Bodylight_Chemical_Examples_Hemoglobin_Allosteric_Hemoglobin2_MWC.fmu) > Bodylight_Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.pipe 2>&1) [Timeout 52.5]
(rm -f Bodylight_Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC_fmpy.pipe ; mkfifo Bodylight_Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC_fmpy.pipe ; head -c 1048576 < Bodylight_Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC_fmpy.pipe >> /var/lib/jenkins/ws/OpenModelicaLibraryTestingWork/OpenModelicaLibraryTesting/files/Bodylight_Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC_fmpy.sim & (cd run_fmpy && python3 -m fmpy simulate --output-file ../Bodylight_Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC_fmpy_res.csv --start-time 0 --stop-time 15000 --timeout 50 --relative-tolerance 1e-14 --interface-type ModelExchange --solver CVode --output-interval 6 ../Bodylight_Bodylight_Chemical_Examples_Hemoglobin_Allosteric_Hemoglobin2_MWC.fmu) > Bodylight_Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC_fmpy.pipe 2>&1) [Timeout 52.5]
[Calling sys.exit(0), Time elapsed: 14.936864977702498]