Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr Pharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.PK_2C_single.conf.json
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo): time 0.001207/0.001207, allocations: 101.5 kB / 18.95 MB, free: 1.184 MB / 13.93 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo): time 0.001458/0.001458, allocations: 221.8 kB / 22.25 MB, free: 3.578 MB / 13.93 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo): time 1.012/1.012, allocations: 230.6 MB / 256 MB, free: 9.59 MB / 202.7 MB
"
[Timeout remaining time 179]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/package.mo", uses=false) [Timeout 180]
"[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/Examples/package.order:0:0-0:0:readonly] Warning: The package.order file does not list all .mo files and directories (containing package.mo) present in its directory.
Missing names are:
	Paracetamol_Experiment
Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/package.mo): time 1.539/1.539, allocations: 334.3 MB / 0.6315 GB, free: 7.922 MB / 442.7 MB
"
[Timeout remaining time 178]
Using package Pharmacolibrary with version 25.09 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/package.mo)
Using package Modelica with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo)
Using package Complex with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo)
Using package ModelicaServices with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo)
Running command: "" <> buildModelFMU(Pharmacolibrary.Examples.Pharmacogenomics.PK_2C_single,fileNamePrefix="Pharmacolibrary_Pharmacolibrary_Examples_Pharmacogenomics_PK_2C_single",fmuType="me",version="2.0",platforms={"static"})
"" <> buildModelFMU(Pharmacolibrary.Examples.Pharmacogenomics.PK_2C_single,fileNamePrefix="Pharmacolibrary_Pharmacolibrary_Examples_Pharmacogenomics_PK_2C_single",fmuType="me",version="2.0",platforms={"static"}) [Timeout 660]
"Notification: Pharmacolibrary requested package Modelica of version 4.0.0. Modelica 4.1.0 is used instead which states that it is fully compatible without conversion script needed.
Notification: Performance of FrontEnd - loaded program: time 0.001052/0.001052, allocations: 72.98 kB / 0.8666 GB, free: 7.684 MB / 0.573 GB
Notification: Performance of FrontEnd - Absyn->SCode: time 0.1691/0.1702, allocations: 112.8 MB / 0.9767 GB, free: 6.602 MB / 0.6824 GB
Notification: Performance of NFInst.instantiate(Pharmacolibrary.Examples.Pharmacogenomics.PK_2C_single): time 0.003927/0.1741, allocations: 3.598 MB / 0.9802 GB, free: 2.977 MB / 0.6824 GB
Notification: Performance of NFInst.instExpressions: time 0.0012/0.1753, allocations: 0.8302 MB / 0.9811 GB, free: 2.145 MB / 0.6824 GB
Notification: Performance of NFInst.updateImplicitVariability: time 0.0001248/0.1754, allocations: 8 kB / 0.9811 GB, free: 2.137 MB / 0.6824 GB
Notification: Performance of NFTyping.typeComponents: time 0.0001573/0.1756, allocations: 55.42 kB / 0.9811 GB, free: 2.082 MB / 0.6824 GB
Notification: Performance of NFTyping.typeBindings: time 0.0002599/0.1759, allocations: 150.8 kB / 0.9813 GB, free: 1.934 MB / 0.6824 GB
Notification: Performance of NFTyping.typeClassSections: time 0.000332/0.1762, allocations: 123.8 kB / 0.9814 GB, free: 1.812 MB / 0.6824 GB
Notification: Performance of NFFlatten.flatten: time 0.000443/0.1766, allocations: 0.5211 MB / 0.9819 GB, free: 1.289 MB / 0.6824 GB
Notification: Performance of NFFlatten.resolveConnections: time 0.0001818/0.1768, allocations: 77.92 kB / 0.982 GB, free: 1.211 MB / 0.6824 GB
Notification: Performance of NFEvalConstants.evaluate: time 0.0001785/0.177, allocations: 191.4 kB / 0.9821 GB, free: 1.023 MB / 0.6824 GB
Notification: Performance of NFSimplifyModel.simplify: time 0.0002723/0.1773, allocations: 187.1 kB / 0.9823 GB, free: 0.8398 MB / 0.6824 GB
Notification: Performance of NFPackage.collectConstants: time 5.271e-05/0.1773, allocations: 48 kB / 0.9824 GB, free: 0.793 MB / 0.6824 GB
Notification: Performance of NFFlatten.collectFunctions: time 6.127e-05/0.1774, allocations: 48 kB / 0.9824 GB, free: 0.7461 MB / 0.6824 GB
Notification: Performance of NFScalarize.scalarize: time 5.731e-05/0.1774, allocations: 75.72 kB / 0.9825 GB, free: 0.6719 MB / 0.6824 GB
Notification: Performance of NFVerifyModel.verify: time 0.0001668/0.1776, allocations: 191.2 kB / 0.9827 GB, free: 496 kB / 0.6824 GB
Notification: Performance of NFConvertDAE.convert: time 0.0004478/0.1781, allocations: 0.5022 MB / 0.9832 GB, free: 15.98 MB / 0.698 GB
Notification: Performance of FrontEnd - DAE generated: time 4.629e-06/0.1781, allocations: 0 / 0.9832 GB, free: 15.98 MB / 0.698 GB
Notification: Performance of FrontEnd: time 3.226e-06/0.1781, allocations: 4 kB / 0.9832 GB, free: 15.97 MB / 0.698 GB
Notification: Performance of Transformations before backend: time 6.542e-06/0.1781, allocations: 0 / 0.9832 GB, free: 15.97 MB / 0.698 GB
Notification: Model statistics after passing the front-end and creating the data structures used by the back-end:
 * Number of equations: 67
 * Number of variables: 67
Notification: Performance of Generate backend data structure: time 0.001002/0.1791, allocations: 0.7188 MB / 0.9839 GB, free: 15.2 MB / 0.698 GB
Notification: Performance of prepare preOptimizeDAE: time 4.52e-05/0.1791, allocations: 10.11 kB / 0.9839 GB, free: 15.2 MB / 0.698 GB
Notification: Performance of preOpt introduceOutputAliases (simulation): time 6.042e-05/0.1792, allocations: 58.73 kB / 0.9839 GB, free: 15.13 MB / 0.698 GB
Notification: Performance of preOpt normalInlineFunction (simulation): time 7.275e-05/0.1792, allocations: 48.66 kB / 0.984 GB, free: 15.08 MB / 0.698 GB
Notification: Performance of preOpt evaluateParameters (simulation): time 0.000321/0.1796, allocations: 257.3 kB / 0.9842 GB, free: 14.81 MB / 0.698 GB
Notification: Performance of preOpt simplifyIfEquations (simulation): time 2.359e-05/0.1796, allocations: 21.03 kB / 0.9842 GB, free: 14.79 MB / 0.698 GB
Notification: Performance of preOpt expandDerOperator (simulation): time 5.392e-05/0.1796, allocations: 31.94 kB / 0.9843 GB, free: 14.76 MB / 0.698 GB
Notification: Performance of preOpt clockPartitioning (simulation): time 0.00056/0.1802, allocations: 414.1 kB / 0.9847 GB, free: 14.32 MB / 0.698 GB
Notification: Performance of preOpt findStateOrder (simulation): time 2.112e-05/0.1802, allocations: 11.89 kB / 0.9847 GB, free: 14.31 MB / 0.698 GB
Notification: Performance of preOpt replaceEdgeChange (simulation): time 2.583e-05/0.1803, allocations: 8 kB / 0.9847 GB, free: 14.3 MB / 0.698 GB
Notification: Performance of preOpt inlineArrayEqn (simulation): time 7.865e-06/0.1803, allocations: 8 kB / 0.9847 GB, free: 14.3 MB / 0.698 GB
Notification: Performance of preOpt removeEqualRHS (simulation): time 0.0004828/0.1807, allocations: 347.5 kB / 0.985 GB, free: 13.94 MB / 0.698 GB
Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.001259/0.182, allocations: 0.9393 MB / 0.9859 GB, free: 12.95 MB / 0.698 GB
Notification: Performance of preOpt comSubExp (simulation): time 0.0005697/0.1826, allocations: 341.8 kB / 0.9863 GB, free: 12.59 MB / 0.698 GB
Notification: Performance of preOpt resolveLoops (simulation): time 0.0002504/0.1828, allocations: 214.2 kB / 0.9865 GB, free: 12.36 MB / 0.698 GB
Notification: Performance of preOpt evalFunc (simulation): time 2.399e-05/0.1828, allocations: 4.281 kB / 0.9865 GB, free: 12.36 MB / 0.698 GB
Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 0.0006539/0.1835, allocations: 0.5054 MB / 0.987 GB, free: 11.79 MB / 0.698 GB
Notification: Performance of pre-optimization done (n=44): time 2.354e-06/0.1835, allocations: 4 kB / 0.987 GB, free: 11.78 MB / 0.698 GB
Notification: Performance of matching and sorting (n=47): time 0.002048/0.1856, allocations: 1.523 MB / 0.9885 GB, free: 10.14 MB / 0.698 GB
Notification: Performance of inlineWhenForInitialization (initialization): time 0.000117/0.1857, allocations: 310.7 kB / 0.9888 GB, free: 9.766 MB / 0.698 GB
Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.0002574/0.1859, allocations: 276.2 kB / 0.989 GB, free: 9.484 MB / 0.698 GB
Notification: Performance of collectPreVariables (initialization): time 3.544e-05/0.186, allocations: 53.62 kB / 0.9891 GB, free: 9.426 MB / 0.698 GB
Notification: Performance of collectInitialEqns (initialization): time 0.0001125/0.1861, allocations: 176.6 kB / 0.9892 GB, free: 9.25 MB / 0.698 GB
Notification: Performance of collectInitialBindings (initialization): time 0.0001034/0.1862, allocations: 154.7 kB / 0.9894 GB, free: 9.098 MB / 0.698 GB
Notification: Performance of simplifyInitialFunctions (initialization): time 0.0001219/0.1863, allocations: 94.08 kB / 0.9895 GB, free: 9 MB / 0.698 GB
Notification: Performance of setup shared object (initialization): time 0.0001054/0.1864, allocations: 346.8 kB / 0.9898 GB, free: 8.652 MB / 0.698 GB
Notification: Performance of preBalanceInitialSystem (initialization): time 0.0003144/0.1867, allocations: 281.7 kB / 0.9901 GB, free: 8.348 MB / 0.698 GB
Notification: Performance of partitionIndependentBlocks (initialization): time 0.3877/0.5744, allocations: 414.6 kB / 0.9905 GB, free: 26.54 MB / 0.698 GB
Notification: Performance of analyzeInitialSystem (initialization): time 0.001109/0.5755, allocations: 1.097 MB / 0.9915 GB, free: 25.93 MB / 0.698 GB
Notification: Performance of solveInitialSystemEqSystem (initialization): time 3.597e-06/0.5755, allocations: 1.125 kB / 0.9915 GB, free: 25.93 MB / 0.698 GB
Notification: Performance of matching and sorting (n=71) (initialization): time 0.0007141/0.5762, allocations: 0.774 MB / 0.9923 GB, free: 25.63 MB / 0.698 GB
Notification: Performance of prepare postOptimizeDAE: time 4.364e-05/0.5763, allocations: 124.5 kB / 0.9924 GB, free: 25.51 MB / 0.698 GB
Notification: Performance of postOpt simplifyComplexFunction (initialization): time 8.656e-06/0.5763, allocations: 3.375 kB / 0.9924 GB, free: 25.51 MB / 0.698 GB
Notification: Performance of postOpt tearingSystem (initialization): time 1.987e-05/0.5763, allocations: 6.688 kB / 0.9924 GB, free: 25.51 MB / 0.698 GB
Notification: Performance of postOpt solveSimpleEquations (initialization): time 0.0002339/0.5765, allocations: 106.3 kB / 0.9925 GB, free: 25.5 MB / 0.698 GB
Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 1.005e-05/0.5765, allocations: 11.69 kB / 0.9925 GB, free: 25.5 MB / 0.698 GB
Notification: Performance of postOpt simplifyAllExpressions (initialization): time 0.0001767/0.5767, allocations: 26.97 kB / 0.9926 GB, free: 25.5 MB / 0.698 GB
Notification: Performance of postOpt collapseArrayExpressions (initialization): time 2.321e-05/0.5767, allocations: 24.02 kB / 0.9926 GB, free: 25.5 MB / 0.698 GB
Warning: Assuming fixed start value for the following 14 variables:
         patient.central.AUC:VARIABLE(unit = \"kg.s/m3\" fixed = true )  \"area under curve\" type: Real
         patient.periodicDose.TotalCumulativeMass:VARIABLE(min = -1e-12 unit = \"kg\" fixed = true )  \"Total dose adminitrated by this source\" type: Real
         patient.periodicDose.absorptionLumen.AUC:VARIABLE(unit = \"kg.s/m3\" fixed = true )  \"area under curve\" type: Real
         patient.periodicDose.variableDose.TotalCumulativeMass:VARIABLE(min = -1e-12 unit = \"kg\" fixed = true )  \"Total dose adminitrated by this source\" type: Real
         patient.peripheral.AUC:VARIABLE(unit = \"kg.s/m3\" fixed = true )  \"area under curve\" type: Real
         patient.peripheral.Cmin:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true )  type: Real
         patient.peripheral.Cmax:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true )  type: Real
         patient.periodicDose.absorptionLumen.Cmin:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true )  type: Real
         patient.periodicDose.absorptionLumen.Cmax:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true )  type: Real
         patient.central.Cmin:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true )  type: Real
         patient.central.Cmax:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true )  type: Real
         patient.peripheral.rising:DISCRETE(fixed = true protected = true )  type: Boolean
         patient.periodicDose.absorptionLumen.rising:DISCRETE(fixed = true protected = true )  type: Boolean
         patient.central.rising:DISCRETE(fixed = true protected = true )  type: Boolean
Notification: Model statistics after passing the back-end for initialization:
 * Number of independent subsystems: 16
 * Number of states: 0 ()
 * Number of discrete variables: 29 ($PRE.patient.peripheral.Cmin,patient.peripheral.Cmin,$PRE.patient.peripheral.Cmax,patient.peripheral.Cmax,$PRE.patient.periodicDose.absorptionLumen.Cmin,patient.periodicDose.absorptionLumen.Cmin,$PRE.patient.periodicDose.absorptionLumen.Cmax,patient.periodicDose.absorptionLumen.Cmax,$PRE.patient.central.Cmin,patient.central.Cmin,$PRE.patient.central.Cmax,patient.central.Cmax,$PRE.patient.peripheral.rising,$PRE.patient.periodicDose.pulse.count,$PRE.patient.periodicDose.pulse.T_start,$PRE.patient.periodicDose.absorptionLumen.rising,$PRE.patient.central.rising,patient.peripheral.rising,patient.periodicDose.pulse.count,patient.periodicDose.pulse.T_start,patient.periodicDose.absorptionLumen.rising,patient.central.rising,$whenCondition6,$whenCondition5,$whenCondition4,$whenCondition3,$whenCondition2,$whenCondition1,$whenCondition7)
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for initialization (67):
 * Single equations (assignments): 63
 * Array equations: 0
 * Algorithm blocks: 4
 * Record equations: 0
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 0
 * Mixed (continuous/discrete) equation systems: 0
Notification: Performance of prepare postOptimizeDAE: time 0.0002867/0.577, allocations: 329 kB / 0.9929 GB, free: 25.28 MB / 0.698 GB
Notification: Performance of postOpt lateInlineFunction (simulation): time 3.95e-05/0.5771, allocations: 42.22 kB / 0.9929 GB, free: 25.28 MB / 0.698 GB
Notification: Performance of postOpt wrapFunctionCalls (simulation): time 4.832e-05/0.5771, allocations: 40.88 kB / 0.993 GB, free: 25.27 MB / 0.698 GB
Notification: Performance of postOpt inlineArrayEqn (simulation): time 4.318e-06/0.5771, allocations: 3.156 kB / 0.993 GB, free: 25.27 MB / 0.698 GB
Notification: Performance of postOpt constantLinearSystem (simulation): time 6.101e-06/0.5771, allocations: 1.281 kB / 0.993 GB, free: 25.27 MB / 0.698 GB
Notification: Performance of postOpt simplifysemiLinear (simulation): time 5.751e-06/0.5771, allocations: 1.359 kB / 0.993 GB, free: 25.27 MB / 0.698 GB
Notification: Performance of postOpt removeSimpleEquations (simulation): time 0.0009838/0.5781, allocations: 1.127 MB / 0.9941 GB, free: 24.81 MB / 0.698 GB
Notification: Performance of postOpt simplifyComplexFunction (simulation): time 3.076e-06/0.5781, allocations: 5.438 kB / 0.9941 GB, free: 24.81 MB / 0.698 GB
Notification: Performance of postOpt solveSimpleEquations (simulation): time 0.0002224/0.5783, allocations: 75.98 kB / 0.9942 GB, free: 24.8 MB / 0.698 GB
Notification: Performance of postOpt tearingSystem (simulation): time 4.258e-06/0.5783, allocations: 1.219 kB / 0.9942 GB, free: 24.8 MB / 0.698 GB
Notification: Performance of postOpt inputDerivativesUsed (simulation): time 2.505e-05/0.5784, allocations: 21.7 kB / 0.9942 GB, free: 24.8 MB / 0.698 GB
Notification: Performance of postOpt calculateStrongComponentJacobians (simulation): time 3.817e-06/0.5784, allocations: 5.75 kB / 0.9942 GB, free: 24.8 MB / 0.698 GB
Notification: Performance of postOpt calculateStateSetsJacobians (simulation): time 1.041e-06/0.5784, allocations: 0 / 0.9942 GB, free: 24.8 MB / 0.698 GB
Notification: Performance of postOpt symbolicJacobian (simulation): time 0.0007869/0.5792, allocations: 1.023 MB / 0.9952 GB, free: 24.37 MB / 0.698 GB
Notification: Performance of postOpt removeConstants (simulation): time 0.0001058/0.5793, allocations: 74.94 kB / 0.9953 GB, free: 24.37 MB / 0.698 GB
Notification: Performance of postOpt simplifyTimeIndepFuncCalls (simulation): time 4.742e-05/0.5793, allocations: 20.89 kB / 0.9953 GB, free: 24.37 MB / 0.698 GB
Notification: Performance of postOpt simplifyAllExpressions (simulation): time 0.000121/0.5794, allocations: 22.47 kB / 0.9953 GB, free: 24.37 MB / 0.698 GB
Notification: Performance of postOpt findZeroCrossings (simulation): time 8.237e-05/0.5795, allocations: 45.69 kB / 0.9953 GB, free: 24.37 MB / 0.698 GB
Notification: Performance of postOpt collapseArrayExpressions (simulation): time 1.986e-05/0.5795, allocations: 15.83 kB / 0.9954 GB, free: 24.37 MB / 0.698 GB
Notification: Performance of sorting global known variables: time 0.0001209/0.5797, allocations: 203.4 kB / 0.9956 GB, free: 24.29 MB / 0.698 GB
Notification: Performance of sort global known variables: time 7e-08/0.5797, allocations: 0.6562 kB / 0.9956 GB, free: 24.29 MB / 0.698 GB
Notification: Performance of remove unused functions: time 0.0003052/0.58, allocations: 116.2 kB / 0.9957 GB, free: 24.29 MB / 0.698 GB
Notification: Model statistics after passing the back-end for simulation:
 * Number of independent subsystems: 1
 * Number of states: 9 (patient.central.C,patient.central.AUC,patient.elim.MExc,patient.periodicDose.TotalCumulativeMass,patient.periodicDose.absorptionLumen.C,patient.periodicDose.absorptionLumen.AUC,patient.periodicDose.variableDose.TotalCumulativeMass,patient.peripheral.C,patient.peripheral.AUC)
 * Number of discrete variables: 18 ($whenCondition7,$whenCondition1,$whenCondition2,$whenCondition3,$whenCondition4,$whenCondition5,$whenCondition6,patient.central.Cmax,patient.central.Cmin,patient.central.rising,patient.periodicDose.absorptionLumen.Cmax,patient.periodicDose.absorptionLumen.Cmin,patient.periodicDose.absorptionLumen.rising,patient.periodicDose.pulse.T_start,patient.periodicDose.pulse.count,patient.peripheral.Cmax,patient.peripheral.Cmin,patient.peripheral.rising)
 * Number of discrete states: 16 (patient.periodicDose.pulse.count,patient.peripheral.Cmin,$whenCondition6,patient.peripheral.Cmax,$whenCondition5,patient.peripheral.rising,patient.periodicDose.absorptionLumen.Cmin,$whenCondition4,patient.periodicDose.absorptionLumen.Cmax,$whenCondition3,patient.periodicDose.absorptionLumen.rising,patient.central.Cmin,$whenCondition2,patient.central.Cmax,$whenCondition1,patient.central.rising)
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for simulation (38):
 * Single equations (assignments): 33
 * Array equations: 0
 * Algorithm blocks: 3
 * Record equations: 0
 * When equations: 2
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 0
 * Mixed (continuous/discrete) equation systems: 0
Notification: Performance of Backend phase and start with SimCode phase: time 0.0009608/0.5809, allocations: 1.594 MB / 0.9972 GB, free: 23.33 MB / 0.698 GB
Notification: Performance of simCode: created initialization part: time 0.000617/0.5815, allocations: 0.8039 MB / 0.998 GB, free: 22.85 MB / 0.698 GB
Notification: Performance of simCode: created event and clocks part: time 2.144e-06/0.5815, allocations: 3.688 kB / 0.998 GB, free: 22.85 MB / 0.698 GB
Notification: Performance of simCode: created simulation system equations: time 0.0002785/0.5818, allocations: 461.3 kB / 0.9985 GB, free: 22.55 MB / 0.698 GB
Notification: Performance of simCode: created of all other equations (e.g. parameter, nominal, assert, etc): time 0.0004181/0.5822, allocations: 120.6 kB / 0.9986 GB, free: 22.55 MB / 0.698 GB
Notification: Performance of simCode: created linear, non-linear and system jacobian parts: time 0.004233/0.5865, allocations: 5.001 MB / 1.003 GB, free: 19.41 MB / 0.698 GB
Notification: Performance of simCode: some other stuff during SimCode phase: time 0.0001517/0.5866, allocations: 192.6 kB / 1.004 GB, free: 19.33 MB / 0.698 GB
Notification: Performance of simCode: alias equations: time 0.0001772/0.5868, allocations: 43.38 kB / 1.004 GB, free: 19.32 MB / 0.698 GB
Notification: Performance of simCode: all other stuff during SimCode phase: time 0.0001333/0.5869, allocations: 122.1 kB / 1.004 GB, free: 19.23 MB / 0.698 GB
Notification: Performance of SimCode: time 1.062e-06/0.5869, allocations: 2.953 kB / 1.004 GB, free: 19.23 MB / 0.698 GB
Notification: Performance of buildModelFMU: Generate the FMI files: time 0.09648/0.6834, allocations: 10.82 MB / 1.014 GB, free: 17.53 MB / 0.698 GB
Notification: Performance of buildModelFMU: Generate platform static: time 7.006/7.689, allocations: 11.41 kB / 1.014 GB, free: 17.53 MB / 0.698 GB
"
[Timeout remaining time 652]
(rm -f Pharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.PK_2C_single.pipe ; mkfifo Pharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.PK_2C_single.pipe ; head -c 1048576 < Pharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.PK_2C_single.pipe >> ../files/Pharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.PK_2C_single.sim & (cd run_OMSimulator && /home/hudson/saved_omc/OMSimulator/install/bin/OMSimulator  --stripRoot --tempDir=temp_Pharmacolibrary_Pharmacolibrary_Examples_Pharmacogenomics_PK_2C_single_fmu --startTime=0 --stopTime=86400 --stepSize=1004.65 --timeout=50 --tolerance=1e-12 ../Pharmacolibrary_Pharmacolibrary_Examples_Pharmacogenomics_PK_2C_single.fmu) > Pharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.PK_2C_single.pipe 2>&1) [Timeout 52.5]
(rm -f Pharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.PK_2C_single_fmpy.pipe ; mkfifo Pharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.PK_2C_single_fmpy.pipe ; head -c 1048576 < Pharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.PK_2C_single_fmpy.pipe >> /var/lib/jenkins/ws/OpenModelicaLibraryTestingWork/OpenModelicaLibraryTesting/files/Pharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.PK_2C_single_fmpy.sim & (cd run_fmpy && python3 -m fmpy simulate --output-file ../Pharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.PK_2C_single_fmpy_res.csv --start-time 0 --stop-time 86400 --timeout 50 --relative-tolerance 1e-12 --interface-type ModelExchange --solver CVode --output-interval 1004.65 ../Pharmacolibrary_Pharmacolibrary_Examples_Pharmacogenomics_PK_2C_single.fmu) > Pharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.PK_2C_single_fmpy.pipe 2>&1) [Timeout 52.5]
fmpy timed out simulating the FMU
[Calling sys.exit(0), Time elapsed: 12.113397247157991]