Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr Pharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.PKPG_Gentamicin_Experiment.conf.json loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo): time 0.001096/0.001096, allocations: 105.5 kB / 18.95 MB, free: 1.184 MB / 13.93 MB " [Timeout remaining time 180] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo): time 0.001393/0.001393, allocations: 211.6 kB / 22.25 MB, free: 3.574 MB / 13.93 MB " [Timeout remaining time 180] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo): time 1.007/1.007, allocations: 230.6 MB / 256 MB, free: 9.609 MB / 202.7 MB " [Timeout remaining time 179] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/package.mo", uses=false) [Timeout 180] "[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/Examples/package.order:0:0-0:0:readonly] Warning: The package.order file does not list all .mo files and directories (containing package.mo) present in its directory. Missing names are: Paracetamol_Experiment Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/package.mo): time 1.436/1.436, allocations: 334.3 MB / 0.6315 GB, free: 7.922 MB / 442.7 MB " [Timeout remaining time 178] Using package Pharmacolibrary with version 25.09 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/package.mo) Using package Modelica with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo) Using package Complex with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo) Using package ModelicaServices with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo) Running command: "" <> buildModelFMU(Pharmacolibrary.Examples.Pharmacogenomics.PKPG_Gentamicin_Experiment,fileNamePrefix="Pharmacolibrary_Pharmacolibrary_Examples_Pharmacogenomics_PKPG_Gentamicin_Experiment",fmuType="me",version="2.0",platforms={"static"}) "" <> buildModelFMU(Pharmacolibrary.Examples.Pharmacogenomics.PKPG_Gentamicin_Experiment,fileNamePrefix="Pharmacolibrary_Pharmacolibrary_Examples_Pharmacogenomics_PKPG_Gentamicin_Experiment",fmuType="me",version="2.0",platforms={"static"}) [Timeout 660] "Notification: Pharmacolibrary requested package Modelica of version 4.0.0. Modelica 4.1.0 is used instead which states that it is fully compatible without conversion script needed. Notification: Performance of FrontEnd - loaded program: time 0.001025/0.001025, allocations: 71.89 kB / 0.8666 GB, free: 7.852 MB / 0.573 GB Notification: Performance of FrontEnd - Absyn->SCode: time 0.1831/0.1842, allocations: 112.8 MB / 0.9767 GB, free: 6.77 MB / 0.6824 GB Notification: Performance of NFInst.instantiate(Pharmacolibrary.Examples.Pharmacogenomics.PKPG_Gentamicin_Experiment): time 0.005478/0.1896, allocations: 4.814 MB / 0.9814 GB, free: 1.934 MB / 0.6824 GB Notification: Performance of NFInst.instExpressions: time 0.00218/0.1918, allocations: 1.596 MB / 0.983 GB, free: 340 kB / 0.6824 GB Notification: Performance of NFInst.updateImplicitVariability: time 0.0002358/0.1921, allocations: 15.94 kB / 0.983 GB, free: 324 kB / 0.6824 GB Notification: Performance of NFTyping.typeComponents: time 0.0004996/0.1926, allocations: 246.2 kB / 0.9832 GB, free: 76 kB / 0.6824 GB Notification: Performance of NFTyping.typeBindings: time 0.0004836/0.193, allocations: 337.5 kB / 0.9836 GB, free: 15.74 MB / 0.698 GB Notification: Performance of NFTyping.typeClassSections: time 0.0005941/0.1936, allocations: 391.4 kB / 0.9839 GB, free: 15.36 MB / 0.698 GB Notification: Performance of NFFlatten.flatten: time 0.0009891/0.1946, allocations: 1.249 MB / 0.9852 GB, free: 14.11 MB / 0.698 GB Notification: Performance of NFFlatten.resolveConnections: time 0.0002879/0.1949, allocations: 181 kB / 0.9853 GB, free: 13.91 MB / 0.698 GB Notification: Performance of NFEvalConstants.evaluate: time 0.00028/0.1952, allocations: 450.4 kB / 0.9858 GB, free: 13.47 MB / 0.698 GB Notification: Performance of NFSimplifyModel.simplify: time 0.0003506/0.1955, allocations: 477.6 kB / 0.9862 GB, free: 13 MB / 0.698 GB Notification: Performance of NFPackage.collectConstants: time 9.449e-05/0.1956, allocations: 116 kB / 0.9863 GB, free: 12.89 MB / 0.698 GB Notification: Performance of NFFlatten.collectFunctions: time 0.0002355/0.1959, allocations: 259.4 kB / 0.9866 GB, free: 12.63 MB / 0.698 GB Notification: Performance of NFScalarize.scalarize: time 0.0001548/0.196, allocations: 274.9 kB / 0.9868 GB, free: 12.36 MB / 0.698 GB Notification: Performance of NFVerifyModel.verify: time 0.0002538/0.1963, allocations: 465.7 kB / 0.9873 GB, free: 11.91 MB / 0.698 GB Notification: Performance of NFConvertDAE.convert: time 0.3305/0.5268, allocations: 1.613 MB / 0.9889 GB, free: 20.58 MB / 0.698 GB Notification: Performance of FrontEnd - DAE generated: time 3.988e-06/0.5268, allocations: 0 / 0.9889 GB, free: 20.58 MB / 0.698 GB Notification: Performance of FrontEnd: time 1.513e-06/0.5268, allocations: 0 / 0.9889 GB, free: 20.58 MB / 0.698 GB Notification: Performance of Transformations before backend: time 2.755e-05/0.5268, allocations: 0.5312 kB / 0.9889 GB, free: 20.58 MB / 0.698 GB Notification: Model statistics after passing the front-end and creating the data structures used by the back-end: * Number of equations: 160 * Number of variables: 160 Notification: Performance of Generate backend data structure: time 0.001537/0.5284, allocations: 1.805 MB / 0.9906 GB, free: 19.34 MB / 0.698 GB Notification: Performance of prepare preOptimizeDAE: time 3.91e-05/0.5284, allocations: 12.48 kB / 0.9906 GB, free: 19.34 MB / 0.698 GB Notification: Performance of preOpt introduceOutputAliases (simulation): time 8.5e-05/0.5285, allocations: 107.6 kB / 0.9907 GB, free: 19.3 MB / 0.698 GB Notification: Performance of preOpt normalInlineFunction (simulation): time 0.000444/0.5289, allocations: 206.4 kB / 0.9909 GB, free: 19.23 MB / 0.698 GB Notification: Performance of preOpt evaluateParameters (simulation): time 0.0005198/0.5295, allocations: 0.5874 MB / 0.9915 GB, free: 18.95 MB / 0.698 GB Notification: Performance of preOpt simplifyIfEquations (simulation): time 2.665e-05/0.5295, allocations: 50.7 kB / 0.9916 GB, free: 18.95 MB / 0.698 GB Notification: Performance of preOpt expandDerOperator (simulation): time 7.69e-05/0.5296, allocations: 77.28 kB / 0.9916 GB, free: 18.95 MB / 0.698 GB Notification: Performance of preOpt clockPartitioning (simulation): time 0.001172/0.5307, allocations: 1.577 MB / 0.9932 GB, free: 18.48 MB / 0.698 GB Notification: Performance of preOpt findStateOrder (simulation): time 2.426e-05/0.5308, allocations: 7.969 kB / 0.9932 GB, free: 18.48 MB / 0.698 GB Notification: Performance of preOpt replaceEdgeChange (simulation): time 3.903e-05/0.5308, allocations: 31.8 kB / 0.9932 GB, free: 18.48 MB / 0.698 GB Notification: Performance of preOpt inlineArrayEqn (simulation): time 1.071e-05/0.5308, allocations: 13.5 kB / 0.9932 GB, free: 18.48 MB / 0.698 GB Notification: Performance of preOpt removeEqualRHS (simulation): time 0.001125/0.5319, allocations: 1.427 MB / 0.9946 GB, free: 18.09 MB / 0.698 GB Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.001837/0.5338, allocations: 1.918 MB / 0.9965 GB, free: 17.5 MB / 0.698 GB Notification: Performance of preOpt comSubExp (simulation): time 0.001455/0.5352, allocations: 1.546 MB / 0.998 GB, free: 17.02 MB / 0.698 GB Notification: Performance of preOpt resolveLoops (simulation): time 0.0007665/0.536, allocations: 1.173 MB / 0.9991 GB, free: 16.6 MB / 0.698 GB Notification: Performance of preOpt evalFunc (simulation): time 2.644e-05/0.536, allocations: 9.688 kB / 0.9991 GB, free: 16.6 MB / 0.698 GB Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 0.001223/0.5372, allocations: 1.698 MB / 1.001 GB, free: 15.85 MB / 0.698 GB Notification: Performance of pre-optimization done (n=104): time 2.073e-06/0.5372, allocations: 0.5938 kB / 1.001 GB, free: 15.85 MB / 0.698 GB Notification: Performance of matching and sorting (n=108): time 0.005836/0.5431, allocations: 7.357 MB / 1.008 GB, free: 11.49 MB / 0.698 GB Notification: Performance of inlineWhenForInitialization (initialization): time 0.0002207/0.5433, allocations: 0.6794 MB / 1.009 GB, free: 10.7 MB / 0.698 GB Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.0009016/0.5442, allocations: 0.9061 MB / 1.01 GB, free: 10.3 MB / 0.698 GB Notification: Performance of collectPreVariables (initialization): time 7.918e-05/0.5443, allocations: 60.78 kB / 1.01 GB, free: 10.25 MB / 0.698 GB Notification: Performance of collectInitialEqns (initialization): time 0.0002977/0.5446, allocations: 421.7 kB / 1.01 GB, free: 9.922 MB / 0.698 GB Notification: Performance of collectInitialBindings (initialization): time 0.0002506/0.5448, allocations: 357.9 kB / 1.01 GB, free: 9.652 MB / 0.698 GB Notification: Performance of simplifyInitialFunctions (initialization): time 0.0002494/0.5451, allocations: 204.3 kB / 1.011 GB, free: 9.562 MB / 0.698 GB Notification: Performance of setup shared object (initialization): time 0.0001114/0.5452, allocations: 355.4 kB / 1.011 GB, free: 9.234 MB / 0.698 GB Notification: Performance of preBalanceInitialSystem (initialization): time 0.001368/0.5466, allocations: 1.345 MB / 1.012 GB, free: 8.391 MB / 0.698 GB Notification: Performance of partitionIndependentBlocks (initialization): time 0.001472/0.548, allocations: 1.675 MB / 1.014 GB, free: 7.141 MB / 0.698 GB Notification: Performance of analyzeInitialSystem (initialization): time 0.005099/0.5531, allocations: 5.437 MB / 1.019 GB, free: 3.688 MB / 0.698 GB Notification: Performance of solveInitialSystemEqSystem (initialization): time 1.263e-05/0.5531, allocations: 6.188 kB / 1.019 GB, free: 3.684 MB / 0.698 GB Notification: Performance of matching and sorting (n=152) (initialization): time 0.002688/0.5558, allocations: 3.177 MB / 1.022 GB, free: 1.816 MB / 0.698 GB Notification: Performance of prepare postOptimizeDAE: time 0.0001683/0.556, allocations: 464.8 kB / 1.023 GB, free: 1.301 MB / 0.698 GB Notification: Performance of postOpt simplifyComplexFunction (initialization): time 1.183e-05/0.556, allocations: 5.75 kB / 1.023 GB, free: 1.301 MB / 0.698 GB Notification: Performance of postOpt tearingSystem (initialization): time 2.265e-05/0.556, allocations: 15.8 kB / 1.023 GB, free: 1.301 MB / 0.698 GB Notification: Performance of postOpt solveSimpleEquations (initialization): time 0.0006252/0.5567, allocations: 204.7 kB / 1.023 GB, free: 1.293 MB / 0.698 GB Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 1.715e-05/0.5567, allocations: 24.64 kB / 1.023 GB, free: 1.285 MB / 0.698 GB Notification: Performance of postOpt simplifyAllExpressions (initialization): time 0.0003916/0.5571, allocations: 75.12 kB / 1.023 GB, free: 1.266 MB / 0.698 GB Notification: Performance of postOpt collapseArrayExpressions (initialization): time 0.0002097/0.5573, allocations: 227.9 kB / 1.023 GB, free: 1.25 MB / 0.698 GB Warning: Assuming fixed start value for the following 24 variables: patient4.dose.TotalCumulativeMass:VARIABLE(min = -1e-12 unit = \"kg\" fixed = true ) \"Total dose adminitrated by this source\" type: Real patient4.dose.variableDose.TotalCumulativeMass:VARIABLE(min = -1e-12 unit = \"kg\" fixed = true ) \"Total dose adminitrated by this source\" type: Real patient4.central.AUC:VARIABLE(unit = \"kg.s/m3\" fixed = true ) \"area under curve\" type: Real patient3.dose.TotalCumulativeMass:VARIABLE(min = -1e-12 unit = \"kg\" fixed = true ) \"Total dose adminitrated by this source\" type: Real patient3.dose.variableDose.TotalCumulativeMass:VARIABLE(min = -1e-12 unit = \"kg\" fixed = true ) \"Total dose adminitrated by this source\" type: Real patient3.central.AUC:VARIABLE(unit = \"kg.s/m3\" fixed = true ) \"area under curve\" type: Real patient2.dose.TotalCumulativeMass:VARIABLE(min = -1e-12 unit = \"kg\" fixed = true ) \"Total dose adminitrated by this source\" type: Real patient2.dose.variableDose.TotalCumulativeMass:VARIABLE(min = -1e-12 unit = \"kg\" fixed = true ) \"Total dose adminitrated by this source\" type: Real patient2.central.AUC:VARIABLE(unit = \"kg.s/m3\" fixed = true ) \"area under curve\" type: Real patient1.dose.TotalCumulativeMass:VARIABLE(min = -1e-12 unit = \"kg\" fixed = true ) \"Total dose adminitrated by this source\" type: Real patient1.dose.variableDose.TotalCumulativeMass:VARIABLE(min = -1e-12 unit = \"kg\" fixed = true ) \"Total dose adminitrated by this source\" type: Real patient1.central.AUC:VARIABLE(unit = \"kg.s/m3\" fixed = true ) \"area under curve\" type: Real patient1.central.Cmin:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real patient1.central.Cmax:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real patient2.central.Cmin:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real patient2.central.Cmax:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real patient3.central.Cmin:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real patient3.central.Cmax:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real patient4.central.Cmin:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real patient4.central.Cmax:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real patient1.central.rising:DISCRETE(fixed = true protected = true ) type: Boolean patient2.central.rising:DISCRETE(fixed = true protected = true ) type: Boolean patient3.central.rising:DISCRETE(fixed = true protected = true ) type: Boolean patient4.central.rising:DISCRETE(fixed = true protected = true ) type: Boolean Notification: Model statistics after passing the back-end for initialization: * Number of independent subsystems: 28 * Number of states: 0 () * Number of discrete variables: 60 ($PRE.patient1.central.Cmin,patient1.central.Cmin,$PRE.patient1.central.Cmax,patient1.central.Cmax,$PRE.patient2.central.Cmin,patient2.central.Cmin,$PRE.patient2.central.Cmax,patient2.central.Cmax,$PRE.patient3.central.Cmin,patient3.central.Cmin,$PRE.patient3.central.Cmax,patient3.central.Cmax,$PRE.patient4.central.Cmin,patient4.central.Cmin,$PRE.patient4.central.Cmax,patient4.central.Cmax,$PRE.patient1.central.rising,$PRE.patient1.dose.pulse.count,$PRE.patient1.dose.pulse.T_start,patient1.CYP2C19.status,patient1.SLC22A2.status,patient1.central.rising,patient1.dose.pulse.count,patient1.dose.pulse.T_start,$whenCondition12,$whenCondition11,$whenCondition10,$PRE.patient2.central.rising,$PRE.patient2.dose.pulse.count,$PRE.patient2.dose.pulse.T_start,patient2.CYP2C19.status,patient2.SLC22A2.status,patient2.central.rising,patient2.dose.pulse.count,patient2.dose.pulse.T_start,$whenCondition9,$whenCondition8,$whenCondition7,$PRE.patient3.central.rising,$PRE.patient3.dose.pulse.count,$PRE.patient3.dose.pulse.T_start,patient3.CYP2C19.status,patient3.SLC22A2.status,patient3.central.rising,patient3.dose.pulse.count,patient3.dose.pulse.T_start,$whenCondition6,$whenCondition5,$whenCondition4,$PRE.patient4.central.rising,$PRE.patient4.dose.pulse.count,$PRE.patient4.dose.pulse.T_start,patient4.CYP2C19.status,patient4.SLC22A2.status,patient4.central.rising,patient4.dose.pulse.count,patient4.dose.pulse.T_start,$whenCondition3,$whenCondition2,$whenCondition1) * Number of discrete states: 0 () * Number of clocked states: 0 () * Top-level inputs: 0 Notification: Strong component statistics for initialization (136): * Single equations (assignments): 120 * Array equations: 0 * Algorithm blocks: 16 * Record equations: 0 * When equations: 0 * If-equations: 0 * Equation systems (not torn): 0 * Torn equation systems: 0 * Mixed (continuous/discrete) equation systems: 0 Notification: Performance of prepare postOptimizeDAE: time 0.0006383/0.5579, allocations: 0.8167 MB / 1.024 GB, free: 0.5859 MB / 0.698 GB Notification: Performance of postOpt lateInlineFunction (simulation): time 0.0002185/0.5581, allocations: 135.5 kB / 1.024 GB, free: 0.5234 MB / 0.698 GB Notification: Performance of postOpt wrapFunctionCalls (simulation): time 0.0001216/0.5582, allocations: 114.8 kB / 1.024 GB, free: 464 kB / 0.698 GB Notification: Performance of postOpt inlineArrayEqn (simulation): time 7.043e-06/0.5583, allocations: 8.969 kB / 1.024 GB, free: 464 kB / 0.698 GB Notification: Performance of postOpt constantLinearSystem (simulation): time 1.562e-05/0.5583, allocations: 5.281 kB / 1.024 GB, free: 460 kB / 0.698 GB Notification: Performance of postOpt simplifysemiLinear (simulation): time 9.558e-06/0.5583, allocations: 5.344 kB / 1.024 GB, free: 460 kB / 0.698 GB Notification: Performance of postOpt removeSimpleEquations (simulation): time 0.003409/0.5617, allocations: 4.039 MB / 1.028 GB, free: 14.12 MB / 0.7137 GB Notification: Performance of postOpt simplifyComplexFunction (simulation): time 3.396e-06/0.5617, allocations: 1.344 kB / 1.028 GB, free: 14.12 MB / 0.7137 GB Notification: Performance of postOpt solveSimpleEquations (simulation): time 0.0004066/0.5621, allocations: 152.2 kB / 1.028 GB, free: 14.12 MB / 0.7137 GB Notification: Performance of postOpt tearingSystem (simulation): time 5.991e-06/0.5621, allocations: 3.562 kB / 1.028 GB, free: 14.12 MB / 0.7137 GB Notification: Performance of postOpt inputDerivativesUsed (simulation): time 6.663e-05/0.5622, allocations: 47.52 kB / 1.028 GB, free: 14.1 MB / 0.7137 GB Notification: Performance of postOpt calculateStrongComponentJacobians (simulation): time 5.481e-06/0.5622, allocations: 7.438 kB / 1.028 GB, free: 14.09 MB / 0.7137 GB Notification: Performance of postOpt calculateStateSetsJacobians (simulation): time 2.655e-06/0.5622, allocations: 1.688 kB / 1.028 GB, free: 14.09 MB / 0.7137 GB Notification: Performance of postOpt symbolicJacobian (simulation): time 0.003734/0.5659, allocations: 4.759 MB / 1.033 GB, free: 11.32 MB / 0.7137 GB Notification: Performance of postOpt removeConstants (simulation): time 0.0001008/0.566, allocations: 106.2 kB / 1.033 GB, free: 11.24 MB / 0.7137 GB Notification: Performance of postOpt simplifyTimeIndepFuncCalls (simulation): time 0.0001188/0.5661, allocations: 44.02 kB / 1.033 GB, free: 11.22 MB / 0.7137 GB Notification: Performance of postOpt simplifyAllExpressions (simulation): time 0.00034/0.5665, allocations: 64.88 kB / 1.033 GB, free: 11.21 MB / 0.7137 GB Notification: Performance of postOpt findZeroCrossings (simulation): time 0.0001772/0.5667, allocations: 110.8 kB / 1.033 GB, free: 11.18 MB / 0.7137 GB Notification: Performance of postOpt collapseArrayExpressions (simulation): time 0.0001913/0.5668, allocations: 219.8 kB / 1.034 GB, free: 11.16 MB / 0.7137 GB Notification: Performance of sorting global known variables: time 0.0006177/0.5675, allocations: 0.6328 MB / 1.034 GB, free: 10.89 MB / 0.7137 GB Notification: Performance of sort global known variables: time 8e-08/0.5675, allocations: 0 / 1.034 GB, free: 10.89 MB / 0.7137 GB Notification: Performance of remove unused functions: time 0.0007052/0.5682, allocations: 268.1 kB / 1.034 GB, free: 10.86 MB / 0.7137 GB Notification: Model statistics after passing the back-end for simulation: * Number of independent subsystems: 4 * Number of states: 20 (patient4.dose.TotalCumulativeMass,patient4.dose.variableDose.TotalCumulativeMass,patient4.central.C,patient4.central.AUC,patient4.elim.MExc,patient3.dose.TotalCumulativeMass,patient3.dose.variableDose.TotalCumulativeMass,patient3.central.C,patient3.central.AUC,patient3.elim.MExc,patient2.dose.TotalCumulativeMass,patient2.dose.variableDose.TotalCumulativeMass,patient2.central.C,patient2.central.AUC,patient2.elim.MExc,patient1.dose.TotalCumulativeMass,patient1.dose.variableDose.TotalCumulativeMass,patient1.central.C,patient1.central.AUC,patient1.elim.MExc) * Number of discrete variables: 40 ($whenCondition1,$whenCondition2,$whenCondition3,patient4.dose.pulse.T_start,patient4.dose.pulse.count,patient4.central.Cmax,patient4.central.Cmin,patient4.central.rising,patient4.SLC22A2.status,patient4.CYP2C19.status,$whenCondition4,$whenCondition5,$whenCondition6,patient3.dose.pulse.T_start,patient3.dose.pulse.count,patient3.central.Cmax,patient3.central.Cmin,patient3.central.rising,patient3.SLC22A2.status,patient3.CYP2C19.status,$whenCondition7,$whenCondition8,$whenCondition9,patient2.dose.pulse.T_start,patient2.dose.pulse.count,patient2.central.Cmax,patient2.central.Cmin,patient2.central.rising,patient2.SLC22A2.status,patient2.CYP2C19.status,$whenCondition10,$whenCondition11,$whenCondition12,patient1.dose.pulse.T_start,patient1.dose.pulse.count,patient1.central.Cmax,patient1.central.Cmin,patient1.central.rising,patient1.SLC22A2.status,patient1.CYP2C19.status) * Number of discrete states: 32 (patient1.dose.pulse.count,patient1.SLC22A2.status,patient1.CYP2C19.status,patient1.central.Cmin,$whenCondition12,patient1.central.Cmax,$whenCondition11,patient1.central.rising,patient2.dose.pulse.count,patient2.SLC22A2.status,patient2.CYP2C19.status,patient2.central.Cmin,$whenCondition9,patient2.central.Cmax,$whenCondition8,patient2.central.rising,patient3.dose.pulse.count,patient3.SLC22A2.status,patient3.CYP2C19.status,patient3.central.Cmin,$whenCondition6,patient3.central.Cmax,$whenCondition5,patient3.central.rising,patient4.dose.pulse.count,patient4.SLC22A2.status,patient4.CYP2C19.status,patient4.central.Cmin,$whenCondition3,patient4.central.Cmax,$whenCondition2,patient4.central.rising) * Number of clocked states: 0 () * Top-level inputs: 0 Notification: Strong component statistics for simulation (88): * Single equations (assignments): 68 * Array equations: 0 * Algorithm blocks: 12 * Record equations: 0 * When equations: 8 * If-equations: 0 * Equation systems (not torn): 0 * Torn equation systems: 0 * Mixed (continuous/discrete) equation systems: 0 Notification: Performance of Backend phase and start with SimCode phase: time 0.004044/0.5722, allocations: 5.445 MB / 1.04 GB, free: 7.508 MB / 0.7137 GB Notification: Performance of simCode: created initialization part: time 0.002491/0.5747, allocations: 3.63 MB / 1.043 GB, free: 4.91 MB / 0.7137 GB Notification: Performance of simCode: created event and clocks part: time 2.435e-06/0.5747, allocations: 1.625 kB / 1.043 GB, free: 4.91 MB / 0.7137 GB Notification: Performance of simCode: created simulation system equations: time 0.001189/0.5759, allocations: 1.99 MB / 1.045 GB, free: 3.414 MB / 0.7137 GB Notification: Performance of simCode: created of all other equations (e.g. parameter, nominal, assert, etc): time 0.0009391/0.5768, allocations: 273.7 kB / 1.046 GB, free: 3.32 MB / 0.7137 GB Notification: Performance of simCode: created linear, non-linear and system jacobian parts: time 0.01518/0.592, allocations: 16.69 MB / 1.062 GB, free: 8.117 MB / 0.7293 GB Notification: Performance of simCode: some other stuff during SimCode phase: time 0.0003593/0.5924, allocations: 0.5171 MB / 1.062 GB, free: 7.812 MB / 0.7293 GB Notification: Performance of simCode: alias equations: time 0.0005268/0.5929, allocations: 81.42 kB / 1.062 GB, free: 7.773 MB / 0.7293 GB Notification: Performance of simCode: all other stuff during SimCode phase: time 0.0003515/0.5933, allocations: 400.2 kB / 1.063 GB, free: 7.43 MB / 0.7293 GB Notification: Performance of SimCode: time 1.163e-06/0.5933, allocations: 2.188 kB / 1.063 GB, free: 7.43 MB / 0.7293 GB Notification: Performance of buildModelFMU: Generate the FMI files: time 0.1036/0.6968, allocations: 29.57 MB / 1.092 GB, free: 12.44 MB / 0.7605 GB Notification: Performance of buildModelFMU: Generate platform static: time 7.817/8.513, allocations: 3.375 kB / 1.092 GB, free: 12.44 MB / 0.7605 GB " [Timeout remaining time 651] (rm -f Pharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.PKPG_Gentamicin_Experiment.pipe ; mkfifo Pharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.PKPG_Gentamicin_Experiment.pipe ; head -c 1048576 < Pharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.PKPG_Gentamicin_Experiment.pipe >> ../files/Pharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.PKPG_Gentamicin_Experiment.sim & (cd run_OMSimulator && /home/hudson/saved_omc/OMSimulator/install/bin/OMSimulator --stripRoot --tempDir=temp_Pharmacolibrary_Pharmacolibrary_Examples_Pharmacogenomics_PKPG_Gentamicin_Experiment_fmu --startTime=0 --stopTime=172800 --stepSize=100 --timeout=50 --tolerance=1e-06 ../Pharmacolibrary_Pharmacolibrary_Examples_Pharmacogenomics_PKPG_Gentamicin_Experiment.fmu) > Pharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.PKPG_Gentamicin_Experiment.pipe 2>&1) [Timeout 52.5] (rm -f Pharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.PKPG_Gentamicin_Experiment_fmpy.pipe ; mkfifo Pharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.PKPG_Gentamicin_Experiment_fmpy.pipe ; head -c 1048576 < Pharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.PKPG_Gentamicin_Experiment_fmpy.pipe >> /var/lib/jenkins/ws/OpenModelicaLibraryTestingWork/OpenModelicaLibraryTesting/files/Pharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.PKPG_Gentamicin_Experiment_fmpy.sim & (cd run_fmpy && python3 -m fmpy simulate --output-file ../Pharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.PKPG_Gentamicin_Experiment_fmpy_res.csv --start-time 0 --stop-time 172800 --timeout 50 --relative-tolerance 1e-06 --interface-type ModelExchange --solver CVode --output-interval 100 ../Pharmacolibrary_Pharmacolibrary_Examples_Pharmacogenomics_PKPG_Gentamicin_Experiment.fmu) > Pharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.PKPG_Gentamicin_Experiment_fmpy.pipe 2>&1) [Timeout 52.5] [Calling sys.exit(0), Time elapsed: 12.730757320299745]