Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr Physiolibrary_Physiolibrary.Fluid.Examples.BloodGasesTransport.BloodyMary.conf.json
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.1/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.1/package.mo): time 0.09341/0.09341, allocations: 15.56 MB / 35.16 MB, free: 4.504 MB / 26.18 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo): time 0.00127/0.00127, allocations: 106.9 kB / 42.74 MB, free: 6.188 MB / 34.91 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo): time 0.001467/0.001467, allocations: 216.2 kB / 50.42 MB, free: 10.03 MB / 34.91 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo): time 1.459/1.459, allocations: 230.6 MB / 288.6 MB, free: 6.352 MB / 206.1 MB
"
[Timeout remaining time 178]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 3.0.0/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 3.0.0/package.mo): time 0.1541/0.1541, allocations: 23.73 MB / 373.2 MB, free: 2.91 MB / 286.1 MB
"
[Timeout remaining time 180]
Using package Physiolibrary with version 3.0.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 3.0.0/package.mo)
Using package Modelica with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo)
Using package Complex with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo)
Using package ModelicaServices with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo)
Using package Chemical with version 1.4.1 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.1/package.mo)
Running command: translateModel(Physiolibrary.Fluid.Examples.BloodGasesTransport.BloodyMary,tolerance=1e-06,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Physiolibrary_Physiolibrary.Fluid.Examples.BloodGasesTransport.BloodyMary")
translateModel(Physiolibrary.Fluid.Examples.BloodGasesTransport.BloodyMary,tolerance=1e-06,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Physiolibrary_Physiolibrary.Fluid.Examples.BloodGasesTransport.BloodyMary") [Timeout 660]
"Notification: Chemical requested package Modelica of version 4.0.0. Modelica 4.1.0 is used instead which states that it is fully compatible without conversion script needed.
Notification: Physiolibrary requested package Modelica of version 4.0.0. Modelica 4.1.0 is used instead which states that it is fully compatible without conversion script needed.
Notification: Physiolibrary requested package Complex of version 4.0.0. Complex 4.1.0 is used instead which states that it is fully compatible without conversion script needed.
Warning: Requested package Chemical of version 1.4.0, but this package was already loaded with version 1.4.1. There are no conversion annotations and 1.4.0 is older than 1.4.1, so the libraries are probably incompatible.
Notification: Performance of FrontEnd - loaded program: time 0.003496/0.003496, allocations: 128.5 kB / 0.5059 GB, free: 14.59 MB / 366.1 MB
Notification: Performance of FrontEnd - Absyn->SCode: time 0.2687/0.2722, allocations: 63.86 MB / 0.5683 GB, free: 14.36 MB / 398.1 MB
Notification: Performance of NFInst.instantiate(Physiolibrary.Fluid.Examples.BloodGasesTransport.BloodyMary): time 0.4848/0.757, allocations: 195.1 MB / 0.7588 GB, free: 136 kB / 0.5294 GB
Notification: Performance of NFInst.instExpressions: time 0.1387/0.8957, allocations: 110.1 MB / 0.8663 GB, free: 15 MB / 0.5919 GB
Notification: Performance of NFInst.updateImplicitVariability: time 0.008377/0.904, allocations: 147.3 kB / 0.8664 GB, free: 14.85 MB / 0.5919 GB
Notification: Performance of NFTyping.typeComponents: time 0.01082/0.9149, allocations: 3.263 MB / 0.8696 GB, free: 11.57 MB / 0.5919 GB
Notification: Performance of NFTyping.typeBindings: time 0.03327/0.9481, allocations: 12.38 MB / 0.8817 GB, free: 15.13 MB / 0.6075 GB
Notification: Performance of NFTyping.typeClassSections: time 0.04528/0.9934, allocations: 18.91 MB / 0.9002 GB, free: 12.14 MB / 0.6231 GB
Notification: Performance of NFFlatten.flatten: time 0.02739/1.021, allocations: 22.3 MB / 0.9219 GB, free: 5.77 MB / 0.6387 GB
Notification: Performance of NFFlatten.resolveConnections: time 0.03711/1.058, allocations: 22.75 MB / 0.9442 GB, free: 14.88 MB / 0.67 GB
Notification: Performance of NFEvalConstants.evaluate: time 3.267/4.325, allocations: 387.8 MB / 1.323 GB, free: 211.5 MB / 0.8575 GB
Notification: Performance of NFSimplifyModel.simplify: time 0.8305/5.155, allocations: 140.6 MB / 1.46 GB, free: 145.9 MB / 0.8575 GB
Notification: Performance of NFPackage.collectConstants: time 0.01157/5.167, allocations: 3.965 MB / 1.464 GB, free: 141.9 MB / 0.8575 GB
Notification: Performance of NFFlatten.collectFunctions: time 4.934/10.1, allocations: 0.6314 GB / 2.095 GB, free: 148.3 MB / 0.8575 GB
Notification: Performance of NFScalarize.scalarize: time 0.01972/10.12, allocations: 19.67 MB / 2.115 GB, free: 139.2 MB / 0.8575 GB
Notification: Performance of NFVerifyModel.verify: time 0.03598/10.16, allocations: 18.83 MB / 2.133 GB, free: 125.2 MB / 0.8575 GB
Notification: Performance of NFConvertDAE.convert: time 0.08833/10.25, allocations: 77 MB / 2.208 GB, free: 51.76 MB / 0.8575 GB
Notification: Performance of FrontEnd - DAE generated: time 6.301e-06/10.25, allocations: 8 kB / 2.208 GB, free: 51.75 MB / 0.8575 GB
Notification: Performance of FrontEnd: time 1.623e-06/10.25, allocations: 0 / 2.208 GB, free: 51.75 MB / 0.8575 GB
Notification: Performance of Transformations before backend: time 0.001384/10.25, allocations: 0 / 2.208 GB, free: 51.75 MB / 0.8575 GB
Notification: Model statistics after passing the front-end and creating the data structures used by the back-end:
 * Number of equations: 8166
 * Number of variables: 8166
Notification: Performance of Generate backend data structure: time 0.09847/10.35, allocations: 36.83 MB / 2.244 GB, free: 14.77 MB / 0.8575 GB
Notification: Performance of prepare preOptimizeDAE: time 4.563e-05/10.35, allocations: 12.03 kB / 2.244 GB, free: 14.76 MB / 0.8575 GB
Notification: Performance of preOpt normalInlineFunction (simulation): time 0.01774/10.36, allocations: 4 MB / 2.248 GB, free: 10.76 MB / 0.8575 GB
Notification: Performance of preOpt evaluateParameters (simulation): time 0.5387/10.9, allocations: 18.85 MB / 2.267 GB, free: 394 MB / 0.8575 GB
Notification: Performance of preOpt simplifyIfEquations (simulation): time 0.002723/10.9, allocations: 2.74 MB / 2.269 GB, free: 392.9 MB / 0.8575 GB
Notification: Performance of preOpt expandDerOperator (simulation): time 0.01168/10.92, allocations: 2.796 MB / 2.272 GB, free: 392 MB / 0.8575 GB
Notification: Performance of preOpt clockPartitioning (simulation): time 0.13/11.05, allocations: 81.08 MB / 2.351 GB, free: 325 MB / 0.8575 GB
Notification: Performance of preOpt findStateOrder (simulation): time 0.001206/11.05, allocations: 120.2 kB / 2.351 GB, free: 324.9 MB / 0.8575 GB
Notification: Performance of preOpt replaceEdgeChange (simulation): time 0.01065/11.06, allocations: 1.133 MB / 2.352 GB, free: 323.8 MB / 0.8575 GB
Notification: Performance of preOpt inlineArrayEqn (simulation): time 0.001163/11.06, allocations: 1.598 MB / 2.354 GB, free: 322.2 MB / 0.8575 GB
Notification: Performance of preOpt removeEqualRHS (simulation): time 0.1418/11.2, allocations: 119.5 MB / 2.471 GB, free: 202.7 MB / 0.8575 GB
Warning: The model contains alias variables with redundant start and/or conflicting nominal values. It is recommended to resolve the conflicts, because otherwise the system could be hard to solve. To print the conflicting alias sets and the chosen candidates please use -d=aliasConflicts.
Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.8926/12.09, allocations: 263.5 MB / 2.728 GB, free: 280.8 MB / 0.8577 GB
Notification: Performance of preOpt comSubExp (simulation): time 0.05284/12.15, allocations: 47.51 MB / 2.774 GB, free: 261.2 MB / 0.8577 GB
Notification: Performance of preOpt resolveLoops (simulation): time 0.04152/12.19, allocations: 37.54 MB / 2.811 GB, free: 242.2 MB / 0.8577 GB
Notification: Performance of preOpt evalFunc (simulation): time 0.1573/12.35, allocations: 124.2 MB / 2.932 GB, free: 117 MB / 0.8577 GB
Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 0.0001502/12.35, allocations: 267.8 kB / 2.932 GB, free: 116.8 MB / 0.8577 GB
Notification: Performance of preOpt simplifyInStream (simulation): time 0.02706/12.37, allocations: 6.802 MB / 2.939 GB, free: 111.1 MB / 0.8577 GB
Notification: Performance of pre-optimization done (n=3087): time 4.884e-05/12.37, allocations: 0.9062 kB / 2.939 GB, free: 111.1 MB / 0.8577 GB
Notification: Performance of matching and sorting (n=3087): time 0.7111/13.08, allocations: 132.2 MB / 3.068 GB, free: 352 MB / 0.8579 GB
Notification: Performance of inlineWhenForInitialization (initialization): time 0.0001408/13.08, allocations: 284.5 kB / 3.068 GB, free: 351.9 MB / 0.8579 GB
Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.01784/13.1, allocations: 16.16 MB / 3.084 GB, free: 347.3 MB / 0.8579 GB
Notification: Performance of collectPreVariables (initialization): time 0.005267/13.11, allocations: 418.1 kB / 3.085 GB, free: 347 MB / 0.8579 GB
Notification: Performance of collectInitialEqns (initialization): time 0.005602/13.11, allocations: 11.92 MB / 3.096 GB, free: 340.1 MB / 0.8579 GB
Notification: Performance of collectInitialBindings (initialization): time 0.01064/13.12, allocations: 11.17 MB / 3.107 GB, free: 332.2 MB / 0.8579 GB
Notification: Performance of simplifyInitialFunctions (initialization): time 0.01886/13.14, allocations: 7.71 MB / 3.115 GB, free: 329.3 MB / 0.8579 GB
Notification: Performance of setup shared object (initialization): time 3.779e-05/13.14, allocations: 301.1 kB / 3.115 GB, free: 329 MB / 0.8579 GB
Notification: Performance of preBalanceInitialSystem (initialization): time 0.04472/13.19, allocations: 39.74 MB / 3.154 GB, free: 306.1 MB / 0.8579 GB
Notification: Performance of partitionIndependentBlocks (initialization): time 0.04946/13.24, allocations: 50.97 MB / 3.204 GB, free: 250.3 MB / 0.8579 GB
Notification: Performance of analyzeInitialSystem (initialization): time 2.088/15.32, allocations: 349.2 MB / 3.545 GB, free: 222.9 MB / 0.8579 GB
Notification: Performance of solveInitialSystemEqSystem (initialization): time 0.0003075/15.32, allocations: 96 kB / 3.545 GB, free: 222.8 MB / 0.8579 GB
Notification: Performance of matching and sorting (n=4958) (initialization): time 0.189/15.51, allocations: 101.8 MB / 3.644 GB, free: 122.1 MB / 0.8579 GB
Notification: Performance of prepare postOptimizeDAE: time 0.0002083/15.51, allocations: 156 kB / 3.644 GB, free: 121.9 MB / 0.8579 GB
Notification: Performance of postOpt simplifyComplexFunction (initialization): time 0.000404/15.51, allocations: 344 kB / 3.645 GB, free: 121.6 MB / 0.8579 GB
Notification: Performance of postOpt tearingSystem (initialization): time 0.1533/15.67, allocations: 16.58 MB / 3.661 GB, free: 105 MB / 0.8579 GB
Notification: Performance of postOpt solveSimpleEquations (initialization): time 0.02704/15.69, allocations: 7.835 MB / 3.668 GB, free: 97.18 MB / 0.8579 GB
Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 0.01471/15.71, allocations: 19.39 MB / 3.687 GB, free: 77.36 MB / 0.8579 GB
Notification: Performance of postOpt simplifyAllExpressions (initialization): time 0.02575/15.73, allocations: 1.708 MB / 3.689 GB, free: 75.71 MB / 0.8579 GB
Notification: Performance of postOpt collapseArrayExpressions (initialization): time 0.007531/15.74, allocations: 2.475 MB / 3.691 GB, free: 73.24 MB / 0.8579 GB
Warning: Assuming fixed start value for the following 18 variables:
         pulmonaryArteries.extraSubstanceAmounts[1]:VARIABLE(start = pulmonaryArteries.tm_start * pulmonaryArteries.C_start[1] fixed = true )  \"Current amount of extra substances\" type: Real [3]
         pulmonaryArteries.extraSubstanceAmounts[2]:VARIABLE(start = pulmonaryArteries.tm_start * pulmonaryArteries.C_start[2] fixed = true )  \"Current amount of extra substances\" type: Real [3]
         pulmonaryArteries.extraSubstanceAmounts[3]:VARIABLE(start = pulmonaryArteries.tm_start * pulmonaryArteries.C_start[3] fixed = true )  \"Current amount of extra substances\" type: Real [3]
         pulmonaryVeins.extraSubstanceAmounts[1]:VARIABLE(start = pulmonaryVeins.tm_start * pulmonaryVeins.C_start[1] fixed = true )  \"Current amount of extra substances\" type: Real [3]
         pulmonaryVeins.extraSubstanceAmounts[2]:VARIABLE(start = pulmonaryVeins.tm_start * pulmonaryVeins.C_start[2] fixed = true )  \"Current amount of extra substances\" type: Real [3]
         pulmonaryVeins.extraSubstanceAmounts[3]:VARIABLE(start = pulmonaryVeins.tm_start * pulmonaryVeins.C_start[3] fixed = true )  \"Current amount of extra substances\" type: Real [3]
         systemicArteries.extraSubstanceAmounts[1]:VARIABLE(start = systemicArteries.tm_start * systemicArteries.C_start[1] fixed = true )  \"Current amount of extra substances\" type: Real [3]
         systemicArteries.extraSubstanceAmounts[2]:VARIABLE(start = systemicArteries.tm_start * systemicArteries.C_start[2] fixed = true )  \"Current amount of extra substances\" type: Real [3]
         systemicArteries.extraSubstanceAmounts[3]:VARIABLE(start = systemicArteries.tm_start * systemicArteries.C_start[3] fixed = true )  \"Current amount of extra substances\" type: Real [3]
         systemicVeins.extraSubstanceAmounts[1]:VARIABLE(start = systemicVeins.tm_start * systemicVeins.C_start[1] fixed = true )  \"Current amount of extra substances\" type: Real [3]
         systemicVeins.extraSubstanceAmounts[2]:VARIABLE(start = systemicVeins.tm_start * systemicVeins.C_start[2] fixed = true )  \"Current amount of extra substances\" type: Real [3]
         systemicVeins.extraSubstanceAmounts[3]:VARIABLE(start = systemicVeins.tm_start * systemicVeins.C_start[3] fixed = true )  \"Current amount of extra substances\" type: Real [3]
         respiratoryUnit[1].pulmCapysVentilated.extraSubstanceAmounts[1]:VARIABLE(start = respiratoryUnit[1].pulmCapysVentilated.tm_start * respiratoryUnit[1].pulmCapysVentilated.C_start[1] fixed = true )  \"Current amount of extra substances\" type: Real [1,3]
         respiratoryUnit[1].pulmCapysVentilated.extraSubstanceAmounts[2]:VARIABLE(start = respiratoryUnit[1].pulmCapysVentilated.tm_start * respiratoryUnit[1].pulmCapysVentilated.C_start[2] fixed = true )  \"Current amount of extra substances\" type: Real [1,3]
         respiratoryUnit[1].pulmCapysVentilated.extraSubstanceAmounts[3]:VARIABLE(start = respiratoryUnit[1].pulmCapysVentilated.tm_start * respiratoryUnit[1].pulmCapysVentilated.C_start[3] fixed = true )  \"Current amount of extra substances\" type: Real [1,3]
         tissueUnit[1].systemicCapillaries.extraSubstanceAmounts[1]:VARIABLE(start = tissueUnit[1].systemicCapillaries.tm_start * tissueUnit[1].systemicCapillaries.C_start[1] fixed = true )  \"Current amount of extra substances\" type: Real [1,3]
         tissueUnit[1].systemicCapillaries.extraSubstanceAmounts[2]:VARIABLE(start = tissueUnit[1].systemicCapillaries.tm_start * tissueUnit[1].systemicCapillaries.C_start[2] fixed = true )  \"Current amount of extra substances\" type: Real [1,3]
         tissueUnit[1].systemicCapillaries.extraSubstanceAmounts[3]:VARIABLE(start = tissueUnit[1].systemicCapillaries.tm_start * tissueUnit[1].systemicCapillaries.C_start[3] fixed = true )  \"Current amount of extra substances\" type: Real [1,3]
Notification: Model statistics after passing the back-end for initialization:
 * Number of independent subsystems: 1571
 * Number of states: 0 ()
 * Number of discrete variables: 0 ()
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for initialization (4024):
 * Single equations (assignments): 3985
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 20
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 19
 * Mixed (continuous/discrete) equation systems: 0
Notification: Torn system details for strict tearing set:
 * Linear torn systems (#iteration vars, #inner vars, density): 0 systems
 * Non-linear torn systems (#iteration vars, #inner vars): 19 systems
   {(1,1), (1,1), (1,1), (1,1), (1,1), (1,3), (4,28), (1,1), (1,3), (5,10), (1,3), (1,1), (6,9), (1,3), (6,9), (1,3), (1,2), (5,10), (1,3)}
Notification: Performance of prepare postOptimizeDAE: time 0.02203/15.76, allocations: 10.75 MB / 3.702 GB, free: 62.72 MB / 0.8579 GB
Notification: Performance of postOpt lateInlineFunction (simulation): time 0.00782/15.77, allocations: 1.856 MB / 3.704 GB, free: 61.09 MB / 0.8579 GB
Notification: Performance of postOpt wrapFunctionCalls (simulation): time 0.4689/16.24, allocations: 96.05 MB / 3.798 GB, free: 309.7 MB / 0.8579 GB
Notification: Performance of postOpt inlineArrayEqn (simulation): time 0.1536/16.39, allocations: 80.87 MB / 3.877 GB, free: 232.3 MB / 0.8579 GB
Notification: Performance of postOpt constantLinearSystem (simulation): time 5.537e-05/16.39, allocations: 4 kB / 3.877 GB, free: 232.3 MB / 0.8579 GB
Notification: Performance of postOpt simplifysemiLinear (simulation): time 0.0005874/16.39, allocations: 119.5 kB / 3.877 GB, free: 232.2 MB / 0.8579 GB
Notification: Performance of postOpt removeSimpleEquations (simulation): time 0.2511/16.65, allocations: 147 MB / 4.02 GB, free: 82.37 MB / 0.8579 GB
Notification: Performance of postOpt simplifyComplexFunction (simulation): time 0.0001376/16.65, allocations: 0 / 4.02 GB, free: 82.37 MB / 0.8579 GB
Notification: Performance of postOpt solveSimpleEquations (simulation): time 0.02581/16.67, allocations: 5.509 MB / 4.026 GB, free: 76.86 MB / 0.8579 GB
Notification: Performance of postOpt tearingSystem (simulation): time 0.1207/16.79, allocations: 13.38 MB / 4.039 GB, free: 63.93 MB / 0.8579 GB
Notification: Performance of postOpt inputDerivativesUsed (simulation): time 0.00674/16.8, allocations: 0.9566 MB / 4.04 GB, free: 62.97 MB / 0.8579 GB
Notification: Performance of postOpt calculateStrongComponentJacobians (simulation): time 0.01345/16.81, allocations: 18.51 MB / 4.058 GB, free: 44.06 MB / 0.8579 GB
Notification: Performance of postOpt calculateStateSetsJacobians (simulation): time 3.296e-06/16.81, allocations: 0 / 4.058 GB, free: 44.06 MB / 0.8579 GB
Notification: Performance of postOpt symbolicJacobian (simulation): time 0.5629/17.38, allocations: 151.8 MB / 4.206 GB, free: 248.9 MB / 0.8579 GB
Notification: Performance of postOpt removeConstants (simulation): time 0.02346/17.4, allocations: 8.372 MB / 4.214 GB, free: 241.1 MB / 0.8579 GB
Notification: Performance of postOpt simplifyTimeIndepFuncCalls (simulation): time 0.00887/17.41, allocations: 0.6765 MB / 4.215 GB, free: 240.4 MB / 0.8579 GB
Notification: Performance of postOpt simplifyAllExpressions (simulation): time 0.01978/17.43, allocations: 1.102 MB / 4.216 GB, free: 239.3 MB / 0.8579 GB
Notification: Performance of postOpt findZeroCrossings (simulation): time 0.008321/17.44, allocations: 2.549 MB / 4.218 GB, free: 236.8 MB / 0.8579 GB
Notification: Performance of postOpt collapseArrayExpressions (simulation): time 0.005814/17.44, allocations: 1.402 MB / 4.22 GB, free: 235.4 MB / 0.8579 GB
Notification: Performance of sorting global known variables: time 0.01516/17.46, allocations: 10.28 MB / 4.23 GB, free: 225.2 MB / 0.8579 GB
Notification: Performance of sort global known variables: time 1.81e-07/17.46, allocations: 4.531 kB / 4.23 GB, free: 225.2 MB / 0.8579 GB
Notification: Performance of remove unused functions: time 0.03915/17.5, allocations: 14.94 MB / 4.244 GB, free: 211.5 MB / 0.8579 GB
Notification: Model statistics after passing the back-end for simulation:
 * Number of independent subsystems: 1
 * Number of states: 263 (pulmonaryArteries.enthalpy,pulmonaryArteries.extraSubstanceAmounts[1],pulmonaryArteries.extraSubstanceAmounts[2],pulmonaryArteries.extraSubstanceAmounts[3],pulmonaryArteries.substanceMasses[1],pulmonaryArteries.substanceMasses[2],pulmonaryArteries.substanceMasses[3],pulmonaryArteries.substanceMasses[4],pulmonaryArteries.substanceMasses[5],pulmonaryArteries.substanceMasses[6],pulmonaryArteries.substanceMasses[7],pulmonaryArteries.substanceMasses[8],pulmonaryArteries.substanceMasses[9],pulmonaryArteries.substanceMasses[10],pulmonaryArteries.substanceMasses[11],pulmonaryArteries.substanceMasses[12],pulmonaryArteries.substanceMasses[13],pulmonaryArteries.substanceMasses[14],pulmonaryArteries.substanceMasses[15],pulmonaryArteries.substanceMasses[16],pulmonaryArteries.substanceMasses[17],pulmonaryArteries.substanceMasses[18],pulmonaryArteries.substanceMasses[19],pulmonaryArteries.substanceMasses[20],pulmonaryArteries.substanceMasses[21],pulmonaryArteries.substanceMasses[22],pulmonaryArteries.substanceMasses[23],pulmonaryArteries.substanceMasses[24],pulmonaryArteries.substanceMasses[25],pulmonaryArteries.substanceMasses[26],pulmonaryArteries.substanceMasses[27],pulmonaryArteries.substanceMasses[28],pulmonaryArteries.substanceMasses[29],pulmonaryArteries.substanceMasses[30],pulmonaryArteries.substanceMasses[31],pulmonaryArteries.substanceMasses[32],pulmonaryArteries.substanceMasses[33],pulmonaryArteries.substanceMasses[34],pulmonaryArteries.substanceMasses[35],pulmonaryArteries.substanceMasses[36],pulmonaryArteries.substanceMasses[37],pulmonaryArteries.substanceMasses[38],pulmonaryArteries.substanceMasses[39],pulmonaryVeins.enthalpy,pulmonaryVeins.extraSubstanceAmounts[1],pulmonaryVeins.extraSubstanceAmounts[2],pulmonaryVeins.extraSubstanceAmounts[3],pulmonaryVeins.substanceMasses[1],pulmonaryVeins.substanceMasses[2],pulmonaryVeins.substanceMasses[3],pulmonaryVeins.substanceMasses[4],pulmonaryVeins.substanceMasses[5],pulmonaryVeins.substanceMasses[6],pulmonaryVeins.substanceMasses[7],pulmonaryVeins.substanceMasses[8],pulmonaryVeins.substanceMasses[9],pulmonaryVeins.substanceMasses[10],pulmonaryVeins.substanceMasses[11],pulmonaryVeins.substanceMasses[12],pulmonaryVeins.substanceMasses[13],pulmonaryVeins.substanceMasses[14],pulmonaryVeins.substanceMasses[15],pulmonaryVeins.substanceMasses[16],pulmonaryVeins.substanceMasses[17],pulmonaryVeins.substanceMasses[18],pulmonaryVeins.substanceMasses[19],pulmonaryVeins.substanceMasses[20],pulmonaryVeins.substanceMasses[21],pulmonaryVeins.substanceMasses[22],pulmonaryVeins.substanceMasses[23],pulmonaryVeins.substanceMasses[24],pulmonaryVeins.substanceMasses[25],pulmonaryVeins.substanceMasses[26],pulmonaryVeins.substanceMasses[27],pulmonaryVeins.substanceMasses[28],pulmonaryVeins.substanceMasses[29],pulmonaryVeins.substanceMasses[30],pulmonaryVeins.substanceMasses[31],pulmonaryVeins.substanceMasses[32],pulmonaryVeins.substanceMasses[33],pulmonaryVeins.substanceMasses[34],pulmonaryVeins.substanceMasses[35],pulmonaryVeins.substanceMasses[36],pulmonaryVeins.substanceMasses[37],pulmonaryVeins.substanceMasses[38],pulmonaryVeins.substanceMasses[39],systemicArteries.chemicalSolution.substanceMasses[1],systemicArteries.chemicalSolution.substanceMasses[2],systemicArteries.chemicalSolution.substanceMasses[3],systemicArteries.chemicalSolution.substanceMasses[4],systemicArteries.chemicalSolution.substanceMasses[5],systemicArteries.chemicalSolution.substanceMasses[6],systemicArteries.chemicalSolution.substanceMasses[7],systemicArteries.chemicalSolution.substanceMasses[8],systemicArteries.chemicalSolution.substanceMasses[9],systemicArteries.chemicalSolution.substanceMasses[10],systemicArteries.chemicalSolution.substanceMasses[11],systemicArteries.chemicalSolution.substanceMasses[12],systemicArteries.chemicalSolution.substanceMasses[13],systemicArteries.chemicalSolution.substanceMasses[14],systemicArteries.chemicalSolution.substanceMasses[15],systemicArteries.chemicalSolution.substanceMasses[16],systemicArteries.chemicalSolution.substanceMasses[17],systemicArteries.chemicalSolution.substanceMasses[18],systemicArteries.chemicalSolution.substanceMasses[19],systemicArteries.chemicalSolution.substanceMasses[20],systemicArteries.chemicalSolution.substanceMasses[21],systemicArteries.chemicalSolution.substanceMasses[22],systemicArteries.chemicalSolution.substanceMasses[23],systemicArteries.chemicalSolution.substanceMasses[24],systemicArteries.chemicalSolution.substanceMasses[25],systemicArteries.chemicalSolution.substanceMasses[26],systemicArteries.chemicalSolution.substanceMasses[27],systemicArteries.chemicalSolution.substanceMasses[28],systemicArteries.chemicalSolution.substanceMasses[29],systemicArteries.chemicalSolution.substanceMasses[30],systemicArteries.chemicalSolution.substanceMasses[31],systemicArteries.chemicalSolution.substanceMasses[32],systemicArteries.chemicalSolution.substanceMasses[33],systemicArteries.chemicalSolution.substanceMasses[34],systemicArteries.chemicalSolution.substanceMasses[35],systemicArteries.chemicalSolution.substanceMasses[36],systemicArteries.chemicalSolution.substanceMasses[37],systemicArteries.chemicalSolution.substanceMasses[38],systemicArteries.chemicalSolution.substanceMasses[39],systemicArteries.enthalpy,systemicArteries.extraSubstanceAmounts[1],systemicArteries.extraSubstanceAmounts[2],systemicArteries.extraSubstanceAmounts[3],systemicVeins.chemicalSolution.substanceMasses[1],systemicVeins.chemicalSolution.substanceMasses[2],systemicVeins.chemicalSolution.substanceMasses[3],systemicVeins.chemicalSolution.substanceMasses[4],systemicVeins.chemicalSolution.substanceMasses[5],systemicVeins.chemicalSolution.substanceMasses[6],systemicVeins.chemicalSolution.substanceMasses[7],systemicVeins.chemicalSolution.substanceMasses[8],systemicVeins.chemicalSolution.substanceMasses[9],systemicVeins.chemicalSolution.substanceMasses[10],systemicVeins.chemicalSolution.substanceMasses[11],systemicVeins.chemicalSolution.substanceMasses[12],systemicVeins.chemicalSolution.substanceMasses[13],systemicVeins.chemicalSolution.substanceMasses[14],systemicVeins.chemicalSolution.substanceMasses[15],systemicVeins.chemicalSolution.substanceMasses[16],systemicVeins.chemicalSolution.substanceMasses[17],systemicVeins.chemicalSolution.substanceMasses[18],systemicVeins.chemicalSolution.substanceMasses[19],systemicVeins.chemicalSolution.substanceMasses[20],systemicVeins.chemicalSolution.substanceMasses[21],systemicVeins.chemicalSolution.substanceMasses[22],systemicVeins.chemicalSolution.substanceMasses[23],systemicVeins.chemicalSolution.substanceMasses[24],systemicVeins.chemicalSolution.substanceMasses[25],systemicVeins.chemicalSolution.substanceMasses[26],systemicVeins.chemicalSolution.substanceMasses[27],systemicVeins.chemicalSolution.substanceMasses[28],systemicVeins.chemicalSolution.substanceMasses[29],systemicVeins.chemicalSolution.substanceMasses[30],systemicVeins.chemicalSolution.substanceMasses[31],systemicVeins.chemicalSolution.substanceMasses[32],systemicVeins.chemicalSolution.substanceMasses[33],systemicVeins.chemicalSolution.substanceMasses[34],systemicVeins.chemicalSolution.substanceMasses[35],systemicVeins.chemicalSolution.substanceMasses[36],systemicVeins.chemicalSolution.substanceMasses[37],systemicVeins.chemicalSolution.substanceMasses[38],systemicVeins.chemicalSolution.substanceMasses[39],systemicVeins.enthalpy,systemicVeins.extraSubstanceAmounts[1],systemicVeins.extraSubstanceAmounts[2],systemicVeins.extraSubstanceAmounts[3],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[1],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[2],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[3],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[4],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[5],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[6],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[7],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[8],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[9],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[10],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[11],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[12],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[13],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[14],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[15],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[16],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[17],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[18],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[19],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[20],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[21],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[22],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[23],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[24],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[25],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[26],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[27],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[28],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[29],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[30],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[31],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[32],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[33],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[34],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[35],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[36],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[37],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[38],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[39],respiratoryUnit[1].pulmCapysVentilated.enthalpy,respiratoryUnit[1].pulmCapysVentilated.extraSubstanceAmounts[1],respiratoryUnit[1].pulmCapysVentilated.extraSubstanceAmounts[2],respiratoryUnit[1].pulmCapysVentilated.extraSubstanceAmounts[3],respiratoryUnit[1].alveoli.chemicalSolution.substanceMasses[1],respiratoryUnit[1].alveoli.chemicalSolution.substanceMasses[2],respiratoryUnit[1].alveoli.chemicalSolution.substanceMasses[3],respiratoryUnit[1].alveoli.chemicalSolution.substanceMasses[4],respiratoryUnit[1].alveoli.enthalpy,tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[1],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[2],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[3],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[4],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[5],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[6],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[7],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[8],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[9],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[10],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[11],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[12],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[13],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[14],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[15],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[16],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[17],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[18],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[19],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[20],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[21],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[22],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[23],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[24],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[25],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[26],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[27],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[28],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[29],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[30],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[31],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[32],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[33],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[34],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[35],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[36],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[37],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[38],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[39],tissueUnit[1].systemicCapillaries.enthalpy,tissueUnit[1].systemicCapillaries.extraSubstanceAmounts[1],tissueUnit[1].systemicCapillaries.extraSubstanceAmounts[2],tissueUnit[1].systemicCapillaries.extraSubstanceAmounts[3])
 * Number of discrete variables: 0 ()
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for simulation (2862):
 * Single equations (assignments): 2823
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 20
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 19
 * Mixed (continuous/discrete) equation systems: 0
Notification: Torn system details for strict tearing set:
 * Linear torn systems (#iteration vars, #inner vars, density): 0 systems
 * Non-linear torn systems (#iteration vars, #inner vars): 19 systems
   {(1,1), (1,1), (1,1), (1,1), (1,1), (1,4), (4,35), (1,1), (1,4), (6,10), (1,4), (1,1), (6,10), (1,4), (6,10), (1,4), (1,3), (5,11), (1,4)}
Notification: Performance of Backend phase and start with SimCode phase: time 0.02141/17.52, allocations: 9.626 MB / 4.254 GB, free: 203.9 MB / 0.8579 GB
Notification: Performance of simCode: created initialization part: time 0.1026/17.62, allocations: 87.3 MB / 4.339 GB, free: 116.6 MB / 0.8579 GB
Notification: Performance of simCode: created event and clocks part: time 8.516e-06/17.62, allocations: 1.062 kB / 4.339 GB, free: 116.6 MB / 0.8579 GB
Notification: Performance of simCode: created simulation system equations: time 0.04874/17.67, allocations: 41.24 MB / 4.379 GB, free: 75.29 MB / 0.8579 GB
Notification: Performance of simCode: created of all other equations (e.g. parameter, nominal, assert, etc): time 0.06537/17.73, allocations: 14.87 MB / 4.394 GB, free: 61.52 MB / 0.8579 GB
Notification: Performance of simCode: created linear, non-linear and system jacobian parts: time 0.4335/18.17, allocations: 120.7 MB / 4.512 GB, free: 263.8 MB / 0.8579 GB
Notification: Performance of simCode: some other stuff during SimCode phase: time 0.02897/18.2, allocations: 17.49 MB / 4.529 GB, free: 250.7 MB / 0.8579 GB
Notification: Performance of simCode: all other stuff during SimCode phase: time 0.01607/18.21, allocations: 3.179 MB / 4.532 GB, free: 247.8 MB / 0.8579 GB
Notification: Performance of SimCode: time 9.42e-07/18.21, allocations: 0 / 4.532 GB, free: 247.8 MB / 0.8579 GB
Notification: Performance of Templates: time 5.678/23.89, allocations: 2.933 GB / 7.465 GB, free: 200 MB / 0.8579 GB
"
[Timeout remaining time 636]
make -j1 -f Physiolibrary_Physiolibrary.Fluid.Examples.BloodGasesTransport.BloodyMary.makefile [Timeout 660]
make -j1 -f Physiolibrary_Physiolibrary.Fluid.Examples.BloodGasesTransport.BloodyMary.makefile clang++ -std=c++17  -fopenmp=libomp  -Winvalid-pch -O2 -g -DNDEBUG -fPIC   -std=c++11 -DBOOST_ALL_DYN_LINK   -DOMC_BUILD  -DUSE_THREAD  -I"." -I"/var/lib/jenkins1/ws/OpenModelicaLibraryTestingWork/OpenModelica/OMCompiler/build/bin/../include/omc/cpp/" -I.  -I"." -I"." -I"/var/lib/jenkins1/ws/OpenModelicaLibraryTestingWork/OpenModelica/OMCompiler/build/include/omc/sundials"     -DMEASURETIME_PROFILEBLOCKS -DUSE_LOGGER  -c -o OMCppPhysiolibrary_Physiolibrary.Fluid.Examples.BloodGasesTransport.BloodyMaryCalcHelperMain.o OMCppPhysiolibrary_Physiolibrary.Fluid.Examples.BloodGasesTransport.BloodyMaryCalcHelperMain.cpp
In file included from OMCppPhysiolibrary_Physiolibrary.Fluid.Examples.BloodGasesTransport.BloodyMaryCalcHelperMain.cpp:8:
In file included from /var/lib/jenkins1/ws/OpenModelicaLibraryTestingWork/OpenModelica/OMCompiler/build/bin/../include/omc/cpp/Core/Modelica.h:206:
/var/lib/jenkins1/ws/OpenModelicaLibraryTestingWork/OpenModelica/OMCompiler/build/bin/../include/omc/cpp/Core/Math/Array.h:883:14: error: array type 'std::basic_string<char>[1]' is not assignable
      _array = otherarray._array;
      ~~~~~~ ^
/var/lib/jenkins1/ws/OpenModelicaLibraryTestingWork/OpenModelica/OMCompiler/build/bin/../include/omc/cpp/Core/Math/Array.h:1056:6: note: in instantiation of member function 'StatArray<std::basic_string<char>, 1, false>::StatArray' requested here
    :StatArray<T, size, external>(otherarray)
     ^
./OMCppPhysiolibrary_Physiolibrary.Fluid.Examples.BloodGasesTransport.BloodyMaryTypes.h:9:8: note: in instantiation of member function 'StatArrayDim1<std::basic_string<char>, 1, false>::StatArrayDim1' requested here
struct Chemical_Interfaces_IdealGas_SubstanceDataType
       ^
1 error generated.
make: *** [<builtin>: OMCppPhysiolibrary_Physiolibrary.Fluid.Examples.BloodGasesTransport.BloodyMaryCalcHelperMain.o] Error 1
[Calling os._exit(0), Time elapsed: 29.432609184179455]
Failed to read output from testmodel.py, exit status != 0:
23.900821031071246 23.910118409 13.661957527
Calling exit ...
<OMPython.OMCSessionZMQ object at 0x7fae33572fe0>