Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr Pharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_1C_Gentamicin.conf.json loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo): time 0.001358/0.001358, allocations: 104.3 kB / 19.71 MB, free: 440 kB / 13.93 MB " [Timeout remaining time 180] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo): time 0.001536/0.001536, allocations: 212 kB / 23 MB, free: 2.969 MB / 13.93 MB " [Timeout remaining time 180] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo): time 1.05/1.05, allocations: 230.6 MB / 256.8 MB, free: 9.613 MB / 202.7 MB " [Timeout remaining time 179] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/package.mo", uses=false) [Timeout 180] "[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/Examples/package.order:0:0-0:0:readonly] Warning: The package.order file does not list all .mo files and directories (containing package.mo) present in its directory. Missing names are: Paracetamol_Experiment Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/package.mo): time 1.769/1.769, allocations: 334.3 MB / 0.6323 GB, free: 7.898 MB / 442.7 MB " [Timeout remaining time 178] Using package Pharmacolibrary with version 25.09 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/package.mo) Using package Modelica with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo) Using package Complex with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo) Using package ModelicaServices with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo) Running command: translateModel(Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_1C_Gentamicin,tolerance=1e-06,outputFormat="empty",numberOfIntervals=86400,variableFilter="",fileNamePrefix="Pharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_1C_Gentamicin") translateModel(Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_1C_Gentamicin,tolerance=1e-06,outputFormat="empty",numberOfIntervals=86400,variableFilter="",fileNamePrefix="Pharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_1C_Gentamicin") [Timeout 660] "Notification: Pharmacolibrary requested package Modelica of version 4.0.0. Modelica 4.1.0 is used instead which states that it is fully compatible without conversion script needed. Notification: Performance of FrontEnd - loaded program: time 0.001735/0.001735, allocations: 63.91 kB / 0.867 GB, free: 7.961 MB / 0.573 GB Notification: Performance of FrontEnd - Absyn->SCode: time 0.1774/0.1791, allocations: 112.8 MB / 0.9772 GB, free: 6.871 MB / 0.6824 GB Notification: Performance of NFInst.instantiate(Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_1C_Gentamicin): time 0.002928/0.1821, allocations: 2.396 MB / 0.9796 GB, free: 4.461 MB / 0.6824 GB Notification: Performance of NFInst.instExpressions: time 0.001245/0.1833, allocations: 0.8954 MB / 0.9804 GB, free: 3.562 MB / 0.6824 GB Notification: Performance of NFInst.updateImplicitVariability: time 0.0001148/0.1834, allocations: 0 / 0.9804 GB, free: 3.562 MB / 0.6824 GB Notification: Performance of NFTyping.typeComponents: time 0.0003838/0.1838, allocations: 119.3 kB / 0.9806 GB, free: 3.445 MB / 0.6824 GB Notification: Performance of NFTyping.typeBindings: time 0.0001261/0.1839, allocations: 83.39 kB / 0.9806 GB, free: 3.363 MB / 0.6824 GB Notification: Performance of NFTyping.typeClassSections: time 0.0003521/0.1843, allocations: 147.5 kB / 0.9808 GB, free: 3.219 MB / 0.6824 GB Notification: Performance of NFFlatten.flatten: time 0.0002844/0.1846, allocations: 282.8 kB / 0.981 GB, free: 2.941 MB / 0.6824 GB Notification: Performance of NFFlatten.resolveConnections: time 0.0001373/0.1847, allocations: 45.42 kB / 0.9811 GB, free: 2.891 MB / 0.6824 GB Notification: Performance of NFEvalConstants.evaluate: time 0.0001157/0.1848, allocations: 103.6 kB / 0.9812 GB, free: 2.789 MB / 0.6824 GB Notification: Performance of NFSimplifyModel.simplify: time 0.0001489/0.185, allocations: 111.5 kB / 0.9813 GB, free: 2.68 MB / 0.6824 GB Notification: Performance of NFPackage.collectConstants: time 3.016e-05/0.185, allocations: 20 kB / 0.9813 GB, free: 2.66 MB / 0.6824 GB Notification: Performance of NFFlatten.collectFunctions: time 0.0001931/0.1852, allocations: 171.4 kB / 0.9815 GB, free: 2.492 MB / 0.6824 GB Notification: Performance of NFScalarize.scalarize: time 7.593e-05/0.1853, allocations: 67.7 kB / 0.9815 GB, free: 2.426 MB / 0.6824 GB Notification: Performance of NFVerifyModel.verify: time 9.39e-05/0.1854, allocations: 111.4 kB / 0.9816 GB, free: 2.316 MB / 0.6824 GB Notification: Performance of NFConvertDAE.convert: time 0.0003863/0.1857, allocations: 414.3 kB / 0.982 GB, free: 1.91 MB / 0.6824 GB Notification: Performance of FrontEnd - DAE generated: time 4.558e-06/0.1858, allocations: 0 / 0.982 GB, free: 1.91 MB / 0.6824 GB Notification: Performance of FrontEnd: time 1.643e-06/0.1858, allocations: 0 / 0.982 GB, free: 1.91 MB / 0.6824 GB Notification: Performance of Transformations before backend: time 6.452e-06/0.1858, allocations: 0 / 0.982 GB, free: 1.91 MB / 0.6824 GB Notification: Model statistics after passing the front-end and creating the data structures used by the back-end: * Number of equations: 40 * Number of variables: 40 Notification: Performance of Generate backend data structure: time 0.0007862/0.1865, allocations: 0.6131 MB / 0.9826 GB, free: 1.242 MB / 0.6824 GB Notification: Performance of prepare preOptimizeDAE: time 3.826e-05/0.1866, allocations: 14.11 kB / 0.9826 GB, free: 1.23 MB / 0.6824 GB Notification: Performance of preOpt normalInlineFunction (simulation): time 0.0001652/0.1868, allocations: 60.69 kB / 0.9827 GB, free: 1.172 MB / 0.6824 GB Notification: Performance of preOpt evaluateParameters (simulation): time 0.0002216/0.187, allocations: 213.5 kB / 0.9829 GB, free: 0.9414 MB / 0.6824 GB Notification: Performance of preOpt simplifyIfEquations (simulation): time 1.581e-05/0.187, allocations: 12.38 kB / 0.9829 GB, free: 0.9297 MB / 0.6824 GB Notification: Performance of preOpt expandDerOperator (simulation): time 3.868e-05/0.187, allocations: 19.94 kB / 0.9829 GB, free: 0.9102 MB / 0.6824 GB Notification: Performance of preOpt clockPartitioning (simulation): time 0.000373/0.1874, allocations: 379.5 kB / 0.9833 GB, free: 0.5156 MB / 0.6824 GB Notification: Performance of preOpt findStateOrder (simulation): time 1.516e-05/0.1874, allocations: 0 / 0.9833 GB, free: 0.5156 MB / 0.6824 GB Notification: Performance of preOpt replaceEdgeChange (simulation): time 1.663e-05/0.1874, allocations: 8 kB / 0.9833 GB, free: 0.5078 MB / 0.6824 GB Notification: Performance of preOpt inlineArrayEqn (simulation): time 5.901e-06/0.1874, allocations: 4 kB / 0.9833 GB, free: 0.5039 MB / 0.6824 GB Notification: Performance of preOpt removeEqualRHS (simulation): time 0.0003058/0.1877, allocations: 337.1 kB / 0.9836 GB, free: 160 kB / 0.6824 GB Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.000647/0.1884, allocations: 484.3 kB / 0.9841 GB, free: 15.65 MB / 0.698 GB Notification: Performance of preOpt comSubExp (simulation): time 0.0003681/0.1888, allocations: 355.6 kB / 0.9844 GB, free: 15.28 MB / 0.698 GB Notification: Performance of preOpt resolveLoops (simulation): time 0.0001933/0.189, allocations: 277.7 kB / 0.9847 GB, free: 14.98 MB / 0.698 GB Notification: Performance of preOpt evalFunc (simulation): time 1.588e-05/0.189, allocations: 11.92 kB / 0.9847 GB, free: 14.97 MB / 0.698 GB Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 0.0004917/0.1895, allocations: 419.6 kB / 0.9851 GB, free: 14.52 MB / 0.698 GB Notification: Performance of pre-optimization done (n=26): time 2.394e-06/0.1895, allocations: 0 / 0.9851 GB, free: 14.52 MB / 0.698 GB Notification: Performance of matching and sorting (n=27): time 0.00152/0.191, allocations: 1.646 MB / 0.9867 GB, free: 12.75 MB / 0.698 GB Notification: Performance of inlineWhenForInitialization (initialization): time 6.928e-05/0.1911, allocations: 191.9 kB / 0.9869 GB, free: 12.52 MB / 0.698 GB Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.0002054/0.1913, allocations: 285.8 kB / 0.9872 GB, free: 12.23 MB / 0.698 GB Notification: Performance of collectPreVariables (initialization): time 2.476e-05/0.1913, allocations: 33.7 kB / 0.9872 GB, free: 12.2 MB / 0.698 GB Notification: Performance of collectInitialEqns (initialization): time 8.824e-05/0.1914, allocations: 156.6 kB / 0.9874 GB, free: 12.04 MB / 0.698 GB Notification: Performance of collectInitialBindings (initialization): time 4.98e-05/0.1914, allocations: 91.27 kB / 0.9874 GB, free: 11.95 MB / 0.698 GB Notification: Performance of simplifyInitialFunctions (initialization): time 6.677e-05/0.1915, allocations: 57.94 kB / 0.9875 GB, free: 11.89 MB / 0.698 GB Notification: Performance of setup shared object (initialization): time 8.718e-05/0.1916, allocations: 346.7 kB / 0.9878 GB, free: 11.54 MB / 0.698 GB Notification: Performance of preBalanceInitialSystem (initialization): time 0.0002335/0.1918, allocations: 328.1 kB / 0.9881 GB, free: 11.19 MB / 0.698 GB Notification: Performance of partitionIndependentBlocks (initialization): time 0.0002457/0.1921, allocations: 395.2 kB / 0.9885 GB, free: 10.75 MB / 0.698 GB Notification: Performance of analyzeInitialSystem (initialization): time 0.0009222/0.193, allocations: 1.26 MB / 0.9898 GB, free: 9.379 MB / 0.698 GB Notification: Performance of solveInitialSystemEqSystem (initialization): time 1.823e-06/0.193, allocations: 0 / 0.9898 GB, free: 9.379 MB / 0.698 GB Notification: Performance of matching and sorting (n=38) (initialization): time 0.0006/0.1936, allocations: 0.7635 MB / 0.9905 GB, free: 8.562 MB / 0.698 GB Notification: Performance of prepare postOptimizeDAE: time 5.868e-05/0.1936, allocations: 122.8 kB / 0.9906 GB, free: 8.418 MB / 0.698 GB Notification: Performance of postOpt simplifyComplexFunction (initialization): time 6.332e-06/0.1936, allocations: 0 / 0.9906 GB, free: 8.418 MB / 0.698 GB Notification: Performance of postOpt tearingSystem (initialization): time 1.505e-05/0.1937, allocations: 4 kB / 0.9906 GB, free: 8.414 MB / 0.698 GB Notification: Performance of postOpt solveSimpleEquations (initialization): time 0.0001396/0.1938, allocations: 52.09 kB / 0.9907 GB, free: 8.363 MB / 0.698 GB Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 8.425e-06/0.1938, allocations: 4 kB / 0.9907 GB, free: 8.359 MB / 0.698 GB Notification: Performance of postOpt simplifyAllExpressions (initialization): time 9.759e-05/0.1939, allocations: 19.98 kB / 0.9907 GB, free: 8.34 MB / 0.698 GB Notification: Performance of postOpt collapseArrayExpressions (initialization): time 6.099e-05/0.194, allocations: 51.92 kB / 0.9907 GB, free: 8.289 MB / 0.698 GB Warning: Assuming fixed start value for the following 6 variables: dose.TotalCumulativeMass:VARIABLE(min = -1e-12 unit = \"kg\" fixed = true ) \"Total dose adminitrated by this source\" type: Real dose.variableDose.TotalCumulativeMass:VARIABLE(min = -1e-12 unit = \"kg\" fixed = true ) \"Total dose adminitrated by this source\" type: Real central.AUC:VARIABLE(unit = \"kg.s/m3\" fixed = true ) \"area under curve\" type: Real central.Cmin:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real central.Cmax:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real central.rising:DISCRETE(fixed = true protected = true ) type: Boolean Notification: Model statistics after passing the back-end for initialization: * Number of independent subsystems: 7 * Number of states: 0 () * Number of discrete variables: 15 ($PRE.central.Cmin,central.Cmin,$PRE.central.Cmax,central.Cmax,$PRE.central.rising,$PRE.dose.pulse.count,$PRE.dose.pulse.T_start,CYP2C19.status,SLC22A2.status,central.rising,dose.pulse.count,dose.pulse.T_start,$whenCondition3,$whenCondition2,$whenCondition1) * Number of discrete states: 0 () * Number of clocked states: 0 () * Top-level inputs: 0 Notification: Strong component statistics for initialization (34): * Single equations (assignments): 30 * Array equations: 0 * Algorithm blocks: 4 * Record equations: 0 * When equations: 0 * If-equations: 0 * Equation systems (not torn): 0 * Torn equation systems: 0 * Mixed (continuous/discrete) equation systems: 0 Notification: Performance of prepare postOptimizeDAE: time 0.0002228/0.1942, allocations: 282.3 kB / 0.991 GB, free: 7.992 MB / 0.698 GB Notification: Performance of postOpt lateInlineFunction (simulation): time 5.399e-05/0.1942, allocations: 35.75 kB / 0.991 GB, free: 7.957 MB / 0.698 GB Notification: Performance of postOpt wrapFunctionCalls (simulation): time 4.11e-05/0.1943, allocations: 30.95 kB / 0.9911 GB, free: 7.926 MB / 0.698 GB Notification: Performance of postOpt inlineArrayEqn (simulation): time 3.587e-06/0.1943, allocations: 4 kB / 0.9911 GB, free: 7.922 MB / 0.698 GB Notification: Performance of postOpt constantLinearSystem (simulation): time 5.761e-06/0.1943, allocations: 0 / 0.9911 GB, free: 7.922 MB / 0.698 GB Notification: Performance of postOpt simplifysemiLinear (simulation): time 4.488e-06/0.1943, allocations: 0 / 0.9911 GB, free: 7.922 MB / 0.698 GB Notification: Performance of postOpt removeSimpleEquations (simulation): time 0.4007/0.595, allocations: 0.9802 MB / 0.992 GB, free: 26.72 MB / 0.698 GB Notification: Performance of postOpt simplifyComplexFunction (simulation): time 5.119e-06/0.595, allocations: 0.5625 kB / 0.992 GB, free: 26.72 MB / 0.698 GB Notification: Performance of postOpt solveSimpleEquations (simulation): time 0.0001561/0.5952, allocations: 39.95 kB / 0.9921 GB, free: 26.72 MB / 0.698 GB Notification: Performance of postOpt tearingSystem (simulation): time 5.6e-06/0.5952, allocations: 2.219 kB / 0.9921 GB, free: 26.72 MB / 0.698 GB Notification: Performance of postOpt inputDerivativesUsed (simulation): time 2.815e-05/0.5952, allocations: 10.89 kB / 0.9921 GB, free: 26.72 MB / 0.698 GB Notification: Performance of postOpt calculateStrongComponentJacobians (simulation): time 3.877e-06/0.5952, allocations: 1.312 kB / 0.9921 GB, free: 26.72 MB / 0.698 GB Notification: Performance of postOpt calculateStateSetsJacobians (simulation): time 2.524e-06/0.5952, allocations: 1.922 kB / 0.9921 GB, free: 26.72 MB / 0.698 GB Notification: Performance of postOpt symbolicJacobian (simulation): time 0.0009071/0.5961, allocations: 1.138 MB / 0.9932 GB, free: 26.3 MB / 0.698 GB Notification: Performance of postOpt removeConstants (simulation): time 4.377e-05/0.5962, allocations: 29.59 kB / 0.9932 GB, free: 26.3 MB / 0.698 GB Notification: Performance of postOpt simplifyTimeIndepFuncCalls (simulation): time 3.941e-05/0.5962, allocations: 11.59 kB / 0.9932 GB, free: 26.3 MB / 0.698 GB Notification: Performance of postOpt simplifyAllExpressions (simulation): time 0.0001033/0.5963, allocations: 14.36 kB / 0.9933 GB, free: 26.3 MB / 0.698 GB Notification: Performance of postOpt findZeroCrossings (simulation): time 8.33e-05/0.5964, allocations: 27.98 kB / 0.9933 GB, free: 26.3 MB / 0.698 GB Notification: Performance of postOpt collapseArrayExpressions (simulation): time 6.257e-05/0.5965, allocations: 48.19 kB / 0.9933 GB, free: 26.3 MB / 0.698 GB Notification: Performance of sorting global known variables: time 0.0001504/0.5966, allocations: 205.4 kB / 0.9935 GB, free: 26.23 MB / 0.698 GB Notification: Performance of sort global known variables: time 7e-08/0.5966, allocations: 1.031 kB / 0.9935 GB, free: 26.23 MB / 0.698 GB Notification: Performance of remove unused functions: time 0.0003055/0.5969, allocations: 76.77 kB / 0.9936 GB, free: 26.23 MB / 0.698 GB Notification: Model statistics after passing the back-end for simulation: * Number of independent subsystems: 1 * Number of states: 5 (dose.TotalCumulativeMass,dose.variableDose.TotalCumulativeMass,central.C,central.AUC,elim.MExc) * Number of discrete variables: 10 ($whenCondition1,$whenCondition2,$whenCondition3,dose.pulse.T_start,dose.pulse.count,central.Cmax,central.Cmin,central.rising,SLC22A2.status,CYP2C19.status) * Number of discrete states: 8 (dose.pulse.count,SLC22A2.status,CYP2C19.status,central.Cmin,$whenCondition3,central.Cmax,$whenCondition2,central.rising) * Number of clocked states: 0 () * Top-level inputs: 0 Notification: Strong component statistics for simulation (22): * Single equations (assignments): 17 * Array equations: 0 * Algorithm blocks: 3 * Record equations: 0 * When equations: 2 * If-equations: 0 * Equation systems (not torn): 0 * Torn equation systems: 0 * Mixed (continuous/discrete) equation systems: 0 Notification: Performance of Backend phase and start with SimCode phase: time 0.0002353/0.5972, allocations: 158.9 kB / 0.9937 GB, free: 26.14 MB / 0.698 GB Notification: Performance of simCode: created initialization part: time 0.0005672/0.5977, allocations: 0.8521 MB / 0.9946 GB, free: 25.66 MB / 0.698 GB Notification: Performance of simCode: created event and clocks part: time 2.134e-06/0.5977, allocations: 1.969 kB / 0.9946 GB, free: 25.66 MB / 0.698 GB Notification: Performance of simCode: created simulation system equations: time 0.0002455/0.598, allocations: 469.7 kB / 0.995 GB, free: 25.38 MB / 0.698 GB Notification: Performance of simCode: created of all other equations (e.g. parameter, nominal, assert, etc): time 0.0003359/0.5983, allocations: 71.92 kB / 0.9951 GB, free: 25.38 MB / 0.698 GB Notification: Performance of simCode: created linear, non-linear and system jacobian parts: time 0.001132/0.5994, allocations: 1.089 MB / 0.9962 GB, free: 24.84 MB / 0.698 GB Notification: Performance of simCode: some other stuff during SimCode phase: time 0.0001064/0.5995, allocations: 176 kB / 0.9963 GB, free: 24.77 MB / 0.698 GB Notification: Performance of simCode: all other stuff during SimCode phase: time 4.349e-05/0.5996, allocations: 19.44 kB / 0.9963 GB, free: 24.76 MB / 0.698 GB Notification: Performance of SimCode: time 7.02e-07/0.5996, allocations: 0 / 0.9963 GB, free: 24.76 MB / 0.698 GB Notification: Performance of Templates: time 0.005632/0.6052, allocations: 4.007 MB / 1 GB, free: 24.4 MB / 0.698 GB " [Timeout remaining time 659] make -j1 -f Pharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_1C_Gentamicin.makefile [Timeout 660] make -j1 -f Pharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_1C_Gentamicin.makefile clang++ -std=c++17 -fopenmp=libomp -Winvalid-pch -O2 -g -DNDEBUG -fPIC -std=c++11 -DBOOST_ALL_DYN_LINK -DOMC_BUILD -DUSE_THREAD -I"." -I"/var/lib/jenkins/ws/OpenModelicaLibraryTestingWork/OpenModelica/OMCompiler/build/bin/../include/omc/cpp/" -I. -I"." -I"." -I"/var/lib/jenkins/ws/OpenModelicaLibraryTestingWork/OpenModelica/OMCompiler/build/include/omc/sundials" -DMEASURETIME_PROFILEBLOCKS -DUSE_LOGGER -c -o OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_1C_GentamicinCalcHelperMain.o OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_1C_GentamicinCalcHelperMain.cpp In file included from OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_1C_GentamicinCalcHelperMain.cpp:29: ./OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_1C_GentamicinInitialize.cpp:180:105: error: use of undeclared identifier 'CYP2C19_P_g_P_ph_P_intermediate_'; did you mean '_SLC22A2_P_g_P_ph_P_intermediate_'? 180 | _functions->Pharmacolibrary_Pharmacogenomics_Phenotypes_CYP2C19__Phenotype(_CYP2C19_P_g_P_ph_P_poor_, CYP2C19_P_g_P_ph_P_intermediate_, _CYP2C19_P_g_P_ph_P_rapid_, CYP2C19_P_g_P_ph_P_ultra_, _CYP2C19_P_g_P_ph_P_CLscale_, _CYP2C19_P_g_P_ph_P_Fscale_,tmp1); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | _SLC22A2_P_g_P_ph_P_intermediate_ ./OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_1C_Gentamicin.h:243:36: note: '_SLC22A2_P_g_P_ph_P_intermediate_' declared here 243 | StatArrayDim1 _SLC22A2_P_g_P_ph_P_intermediate_; | ^ In file included from OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_1C_GentamicinCalcHelperMain.cpp:29: ./OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_1C_GentamicinInitialize.cpp:180:167: error: use of undeclared identifier 'CYP2C19_P_g_P_ph_P_ultra_'; did you mean '_CYP2C19_P_g_P_ph_P_poor_'? 180 | _functions->Pharmacolibrary_Pharmacogenomics_Phenotypes_CYP2C19__Phenotype(_CYP2C19_P_g_P_ph_P_poor_, CYP2C19_P_g_P_ph_P_intermediate_, _CYP2C19_P_g_P_ph_P_rapid_, CYP2C19_P_g_P_ph_P_ultra_, _CYP2C19_P_g_P_ph_P_CLscale_, _CYP2C19_P_g_P_ph_P_Fscale_,tmp1); | ^~~~~~~~~~~~~~~~~~~~~~~~~ | _CYP2C19_P_g_P_ph_P_poor_ ./OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_1C_Gentamicin.h:238:36: note: '_CYP2C19_P_g_P_ph_P_poor_' declared here 238 | StatArrayDim1 _CYP2C19_P_g_P_ph_P_poor_; | ^ In file included from OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_1C_GentamicinCalcHelperMain.cpp:29: ./OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_1C_GentamicinInitialize.cpp:184:105: error: use of undeclared identifier 'CYP2C19_P_g_P_ph_P_intermediate_'; did you mean '_SLC22A2_P_g_P_ph_P_intermediate_'? 184 | _functions->Pharmacolibrary_Pharmacogenomics_Phenotypes_CYP2C19__Phenotype(_CYP2C19_P_g_P_ph_P_poor_, CYP2C19_P_g_P_ph_P_intermediate_, _CYP2C19_P_g_P_ph_P_rapid_, CYP2C19_P_g_P_ph_P_ultra_, _CYP2C19_P_g_P_ph_P_CLscale_, _CYP2C19_P_g_P_ph_P_Fscale_,tmp3); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | _SLC22A2_P_g_P_ph_P_intermediate_ ./OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_1C_Gentamicin.h:243:36: note: '_SLC22A2_P_g_P_ph_P_intermediate_' declared here 243 | StatArrayDim1 _SLC22A2_P_g_P_ph_P_intermediate_; | ^ In file included from OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_1C_GentamicinCalcHelperMain.cpp:29: ./OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_1C_GentamicinInitialize.cpp:184:167: error: use of undeclared identifier 'CYP2C19_P_g_P_ph_P_ultra_'; did you mean '_CYP2C19_P_g_P_ph_P_poor_'? 184 | _functions->Pharmacolibrary_Pharmacogenomics_Phenotypes_CYP2C19__Phenotype(_CYP2C19_P_g_P_ph_P_poor_, CYP2C19_P_g_P_ph_P_intermediate_, _CYP2C19_P_g_P_ph_P_rapid_, CYP2C19_P_g_P_ph_P_ultra_, _CYP2C19_P_g_P_ph_P_CLscale_, _CYP2C19_P_g_P_ph_P_Fscale_,tmp3); | ^~~~~~~~~~~~~~~~~~~~~~~~~ | _CYP2C19_P_g_P_ph_P_poor_ ./OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_1C_Gentamicin.h:238:36: note: '_CYP2C19_P_g_P_ph_P_poor_' declared here 238 | StatArrayDim1 _CYP2C19_P_g_P_ph_P_poor_; | ^ In file included from OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_1C_GentamicinCalcHelperMain.cpp:29: ./OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_1C_GentamicinInitialize.cpp:218:75: error: use of undeclared identifier 'SLC22A2_P_g_P_ph_P_poor_' 218 | _functions->Pharmacolibrary_Pharmacogenomics_Phenotypes_OCT2__Phenotype(SLC22A2_P_g_P_ph_P_poor_, _SLC22A2_P_g_P_ph_P_intermediate_, SLC22A2_P_g_P_ph_P_rapid_, SLC22A2_P_g_P_ph_P_ultra_, _SLC22A2_P_g_P_ph_P_CLscale_, _SLC22A2_P_g_P_ph_P_Fscale_,tmp5); | ^~~~~~~~~~~~~~~~~~~~~~~~ ./OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_1C_GentamicinInitialize.cpp:218:136: error: use of undeclared identifier 'SLC22A2_P_g_P_ph_P_rapid_' 218 | _functions->Pharmacolibrary_Pharmacogenomics_Phenotypes_OCT2__Phenotype(SLC22A2_P_g_P_ph_P_poor_, _SLC22A2_P_g_P_ph_P_intermediate_, SLC22A2_P_g_P_ph_P_rapid_, SLC22A2_P_g_P_ph_P_ultra_, _SLC22A2_P_g_P_ph_P_CLscale_, _SLC22A2_P_g_P_ph_P_Fscale_,tmp5); | ^~~~~~~~~~~~~~~~~~~~~~~~~ ./OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_1C_GentamicinInitialize.cpp:218:163: error: use of undeclared identifier 'SLC22A2_P_g_P_ph_P_ultra_' 218 | _functions->Pharmacolibrary_Pharmacogenomics_Phenotypes_OCT2__Phenotype(SLC22A2_P_g_P_ph_P_poor_, _SLC22A2_P_g_P_ph_P_intermediate_, SLC22A2_P_g_P_ph_P_rapid_, SLC22A2_P_g_P_ph_P_ultra_, _SLC22A2_P_g_P_ph_P_CLscale_, _SLC22A2_P_g_P_ph_P_Fscale_,tmp5); | ^~~~~~~~~~~~~~~~~~~~~~~~~ ./OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_1C_GentamicinInitialize.cpp:222:75: error: use of undeclared identifier 'SLC22A2_P_g_P_ph_P_poor_' 222 | _functions->Pharmacolibrary_Pharmacogenomics_Phenotypes_OCT2__Phenotype(SLC22A2_P_g_P_ph_P_poor_, _SLC22A2_P_g_P_ph_P_intermediate_, SLC22A2_P_g_P_ph_P_rapid_, SLC22A2_P_g_P_ph_P_ultra_, _SLC22A2_P_g_P_ph_P_CLscale_, _SLC22A2_P_g_P_ph_P_Fscale_,tmp7); | ^~~~~~~~~~~~~~~~~~~~~~~~ ./OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_1C_GentamicinInitialize.cpp:222:136: error: use of undeclared identifier 'SLC22A2_P_g_P_ph_P_rapid_' 222 | _functions->Pharmacolibrary_Pharmacogenomics_Phenotypes_OCT2__Phenotype(SLC22A2_P_g_P_ph_P_poor_, _SLC22A2_P_g_P_ph_P_intermediate_, SLC22A2_P_g_P_ph_P_rapid_, SLC22A2_P_g_P_ph_P_ultra_, _SLC22A2_P_g_P_ph_P_CLscale_, _SLC22A2_P_g_P_ph_P_Fscale_,tmp7); | ^~~~~~~~~~~~~~~~~~~~~~~~~ ./OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_1C_GentamicinInitialize.cpp:222:163: error: use of undeclared identifier 'SLC22A2_P_g_P_ph_P_ultra_' 222 | _functions->Pharmacolibrary_Pharmacogenomics_Phenotypes_OCT2__Phenotype(SLC22A2_P_g_P_ph_P_poor_, _SLC22A2_P_g_P_ph_P_intermediate_, SLC22A2_P_g_P_ph_P_rapid_, SLC22A2_P_g_P_ph_P_ultra_, _SLC22A2_P_g_P_ph_P_CLscale_, _SLC22A2_P_g_P_ph_P_Fscale_,tmp7); | ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_1C_GentamicinCalcHelperMain.cpp:33: ./OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_1C_Gentamicin.cpp:177:105: error: use of undeclared identifier 'CYP2C19_P_g_P_ph_P_intermediate_'; did you mean '_SLC22A2_P_g_P_ph_P_intermediate_'? 177 | _functions->Pharmacolibrary_Pharmacogenomics_Phenotypes_CYP2C19__Phenotype(_CYP2C19_P_g_P_ph_P_poor_, CYP2C19_P_g_P_ph_P_intermediate_, _CYP2C19_P_g_P_ph_P_rapid_, CYP2C19_P_g_P_ph_P_ultra_, _CYP2C19_P_g_P_ph_P_CLscale_, _CYP2C19_P_g_P_ph_P_Fscale_,tmp31); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | _SLC22A2_P_g_P_ph_P_intermediate_ ./OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_1C_Gentamicin.h:243:36: note: '_SLC22A2_P_g_P_ph_P_intermediate_' declared here 243 | StatArrayDim1 _SLC22A2_P_g_P_ph_P_intermediate_; | ^ In file included from OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_1C_GentamicinCalcHelperMain.cpp:33: ./OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_1C_Gentamicin.cpp:177:167: error: use of undeclared identifier 'CYP2C19_P_g_P_ph_P_ultra_'; did you mean '_CYP2C19_P_g_P_ph_P_poor_'? 177 | _functions->Pharmacolibrary_Pharmacogenomics_Phenotypes_CYP2C19__Phenotype(_CYP2C19_P_g_P_ph_P_poor_, CYP2C19_P_g_P_ph_P_intermediate_, _CYP2C19_P_g_P_ph_P_rapid_, CYP2C19_P_g_P_ph_P_ultra_, _CYP2C19_P_g_P_ph_P_CLscale_, _CYP2C19_P_g_P_ph_P_Fscale_,tmp31); | ^~~~~~~~~~~~~~~~~~~~~~~~~ | _CYP2C19_P_g_P_ph_P_poor_ ./OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_1C_Gentamicin.h:238:36: note: '_CYP2C19_P_g_P_ph_P_poor_' declared here 238 | StatArrayDim1 _CYP2C19_P_g_P_ph_P_poor_; | ^ In file included from OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_1C_GentamicinCalcHelperMain.cpp:33: ./OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_1C_Gentamicin.cpp:181:105: error: use of undeclared identifier 'CYP2C19_P_g_P_ph_P_intermediate_'; did you mean '_SLC22A2_P_g_P_ph_P_intermediate_'? 181 | _functions->Pharmacolibrary_Pharmacogenomics_Phenotypes_CYP2C19__Phenotype(_CYP2C19_P_g_P_ph_P_poor_, CYP2C19_P_g_P_ph_P_intermediate_, _CYP2C19_P_g_P_ph_P_rapid_, CYP2C19_P_g_P_ph_P_ultra_, _CYP2C19_P_g_P_ph_P_CLscale_, _CYP2C19_P_g_P_ph_P_Fscale_,tmp33); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | _SLC22A2_P_g_P_ph_P_intermediate_ ./OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_1C_Gentamicin.h:243:36: note: '_SLC22A2_P_g_P_ph_P_intermediate_' declared here 243 | StatArrayDim1 _SLC22A2_P_g_P_ph_P_intermediate_; | ^ In file included from OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_1C_GentamicinCalcHelperMain.cpp:33: ./OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_1C_Gentamicin.cpp:181:167: error: use of undeclared identifier 'CYP2C19_P_g_P_ph_P_ultra_'; did you mean '_CYP2C19_P_g_P_ph_P_poor_'? 181 | _functions->Pharmacolibrary_Pharmacogenomics_Phenotypes_CYP2C19__Phenotype(_CYP2C19_P_g_P_ph_P_poor_, CYP2C19_P_g_P_ph_P_intermediate_, _CYP2C19_P_g_P_ph_P_rapid_, CYP2C19_P_g_P_ph_P_ultra_, _CYP2C19_P_g_P_ph_P_CLscale_, _CYP2C19_P_g_P_ph_P_Fscale_,tmp33); | ^~~~~~~~~~~~~~~~~~~~~~~~~ | _CYP2C19_P_g_P_ph_P_poor_ ./OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_1C_Gentamicin.h:238:36: note: '_CYP2C19_P_g_P_ph_P_poor_' declared here 238 | StatArrayDim1 _CYP2C19_P_g_P_ph_P_poor_; | ^ In file included from OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_1C_GentamicinCalcHelperMain.cpp:33: ./OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_1C_Gentamicin.cpp:215:75: error: use of undeclared identifier 'SLC22A2_P_g_P_ph_P_poor_' 215 | _functions->Pharmacolibrary_Pharmacogenomics_Phenotypes_OCT2__Phenotype(SLC22A2_P_g_P_ph_P_poor_, _SLC22A2_P_g_P_ph_P_intermediate_, SLC22A2_P_g_P_ph_P_rapid_, SLC22A2_P_g_P_ph_P_ultra_, _SLC22A2_P_g_P_ph_P_CLscale_, _SLC22A2_P_g_P_ph_P_Fscale_,tmp35); | ^~~~~~~~~~~~~~~~~~~~~~~~ ./OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_1C_Gentamicin.cpp:215:136: error: use of undeclared identifier 'SLC22A2_P_g_P_ph_P_rapid_' 215 | _functions->Pharmacolibrary_Pharmacogenomics_Phenotypes_OCT2__Phenotype(SLC22A2_P_g_P_ph_P_poor_, _SLC22A2_P_g_P_ph_P_intermediate_, SLC22A2_P_g_P_ph_P_rapid_, SLC22A2_P_g_P_ph_P_ultra_, _SLC22A2_P_g_P_ph_P_CLscale_, _SLC22A2_P_g_P_ph_P_Fscale_,tmp35); | ^~~~~~~~~~~~~~~~~~~~~~~~~ ./OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_1C_Gentamicin.cpp:215:163: error: use of undeclared identifier 'SLC22A2_P_g_P_ph_P_ultra_' 215 | _functions->Pharmacolibrary_Pharmacogenomics_Phenotypes_OCT2__Phenotype(SLC22A2_P_g_P_ph_P_poor_, _SLC22A2_P_g_P_ph_P_intermediate_, SLC22A2_P_g_P_ph_P_rapid_, SLC22A2_P_g_P_ph_P_ultra_, _SLC22A2_P_g_P_ph_P_CLscale_, _SLC22A2_P_g_P_ph_P_Fscale_,tmp35); | ^~~~~~~~~~~~~~~~~~~~~~~~~ ./OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_1C_Gentamicin.cpp:219:75: error: use of undeclared identifier 'SLC22A2_P_g_P_ph_P_poor_' 219 | _functions->Pharmacolibrary_Pharmacogenomics_Phenotypes_OCT2__Phenotype(SLC22A2_P_g_P_ph_P_poor_, _SLC22A2_P_g_P_ph_P_intermediate_, SLC22A2_P_g_P_ph_P_rapid_, SLC22A2_P_g_P_ph_P_ultra_, _SLC22A2_P_g_P_ph_P_CLscale_, _SLC22A2_P_g_P_ph_P_Fscale_,tmp37); | ^~~~~~~~~~~~~~~~~~~~~~~~ ./OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_1C_Gentamicin.cpp:219:136: error: use of undeclared identifier 'SLC22A2_P_g_P_ph_P_rapid_' 219 | _functions->Pharmacolibrary_Pharmacogenomics_Phenotypes_OCT2__Phenotype(SLC22A2_P_g_P_ph_P_poor_, _SLC22A2_P_g_P_ph_P_intermediate_, SLC22A2_P_g_P_ph_P_rapid_, SLC22A2_P_g_P_ph_P_ultra_, _SLC22A2_P_g_P_ph_P_CLscale_, _SLC22A2_P_g_P_ph_P_Fscale_,tmp37); | ^~~~~~~~~~~~~~~~~~~~~~~~~ fatal error: too many errors emitted, stopping now [-ferror-limit=] 20 errors generated. make: *** [: OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_1C_GentamicinCalcHelperMain.o] Error 1 [Calling os._exit(0), Time elapsed: 5.861374886939302]