Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr Pharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.PKPG_Lithium_Experiment.conf.json loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo): time 0.001413/0.001413, allocations: 104.3 kB / 19.71 MB, free: 440 kB / 13.93 MB " [Timeout remaining time 180] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo): time 0.001809/0.001809, allocations: 216.2 kB / 23 MB, free: 2.98 MB / 13.93 MB " [Timeout remaining time 180] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo): time 0.9901/0.9901, allocations: 230.6 MB / 256.8 MB, free: 9.605 MB / 202.7 MB " [Timeout remaining time 179] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/package.mo", uses=false) [Timeout 180] "[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/Examples/package.order:0:0-0:0:readonly] Warning: The package.order file does not list all .mo files and directories (containing package.mo) present in its directory. Missing names are: Paracetamol_Experiment Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/package.mo): time 1.764/1.764, allocations: 334.3 MB / 0.6323 GB, free: 7.965 MB / 442.7 MB " [Timeout remaining time 178] Using package Pharmacolibrary with version 25.09 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/package.mo) Using package Modelica with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo) Using package Complex with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo) Using package ModelicaServices with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo) Running command: translateModel(Pharmacolibrary.Examples.Pharmacogenomics.PKPG_Lithium_Experiment,tolerance=1e-06,outputFormat="empty",numberOfIntervals=86400,variableFilter="",fileNamePrefix="Pharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.PKPG_Lithium_Experiment") translateModel(Pharmacolibrary.Examples.Pharmacogenomics.PKPG_Lithium_Experiment,tolerance=1e-06,outputFormat="empty",numberOfIntervals=86400,variableFilter="",fileNamePrefix="Pharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.PKPG_Lithium_Experiment") [Timeout 660] "Notification: Pharmacolibrary requested package Modelica of version 4.0.0. Modelica 4.1.0 is used instead which states that it is fully compatible without conversion script needed. Notification: Performance of FrontEnd - loaded program: time 0.004719/0.004719, allocations: 71.89 kB / 0.867 GB, free: 8.152 MB / 0.573 GB Notification: Performance of FrontEnd - Absyn->SCode: time 0.1882/0.1929, allocations: 112.8 MB / 0.9772 GB, free: 7.07 MB / 0.6824 GB Notification: Performance of NFInst.instantiate(Pharmacolibrary.Examples.Pharmacogenomics.PKPG_Lithium_Experiment): time 0.005088/0.198, allocations: 6.041 MB / 0.9831 GB, free: 1 MB / 0.6824 GB Notification: Performance of NFInst.instExpressions: time 0.002855/0.2009, allocations: 1.97 MB / 0.985 GB, free: 15.02 MB / 0.698 GB Notification: Performance of NFInst.updateImplicitVariability: time 0.0004498/0.2013, allocations: 19.94 kB / 0.985 GB, free: 15 MB / 0.698 GB Notification: Performance of NFTyping.typeComponents: time 0.0006107/0.2019, allocations: 285.8 kB / 0.9853 GB, free: 14.72 MB / 0.698 GB Notification: Performance of NFTyping.typeBindings: time 0.0006152/0.2025, allocations: 448.5 kB / 0.9857 GB, free: 14.28 MB / 0.698 GB Notification: Performance of NFTyping.typeClassSections: time 0.0008575/0.2034, allocations: 0.5266 MB / 0.9862 GB, free: 13.75 MB / 0.698 GB Notification: Performance of NFFlatten.flatten: time 0.001386/0.2048, allocations: 1.755 MB / 0.988 GB, free: 11.99 MB / 0.698 GB Notification: Performance of NFFlatten.resolveConnections: time 0.0003643/0.2051, allocations: 255.6 kB / 0.9882 GB, free: 11.73 MB / 0.698 GB Notification: Performance of NFEvalConstants.evaluate: time 0.3981/0.6032, allocations: 0.5983 MB / 0.9888 GB, free: 18.46 MB / 0.698 GB Notification: Performance of NFSimplifyModel.simplify: time 0.001048/0.6043, allocations: 0.6096 MB / 0.9894 GB, free: 18.44 MB / 0.698 GB Notification: Performance of NFPackage.collectConstants: time 0.0003343/0.6046, allocations: 167.7 kB / 0.9895 GB, free: 18.44 MB / 0.698 GB Notification: Performance of NFFlatten.collectFunctions: time 0.0005954/0.6052, allocations: 306.6 kB / 0.9898 GB, free: 18.44 MB / 0.698 GB Notification: Performance of NFScalarize.scalarize: time 0.0002943/0.6055, allocations: 363.2 kB / 0.9902 GB, free: 18.38 MB / 0.698 GB Notification: Performance of NFVerifyModel.verify: time 0.0006241/0.6061, allocations: 0.6244 MB / 0.9908 GB, free: 18.21 MB / 0.698 GB Notification: Performance of NFConvertDAE.convert: time 0.001822/0.608, allocations: 2.153 MB / 0.9929 GB, free: 17.94 MB / 0.698 GB Notification: Performance of FrontEnd - DAE generated: time 4.789e-06/0.608, allocations: 0 / 0.9929 GB, free: 17.94 MB / 0.698 GB Notification: Performance of FrontEnd: time 2.294e-06/0.608, allocations: 2.344 kB / 0.9929 GB, free: 17.94 MB / 0.698 GB Notification: Performance of Transformations before backend: time 3.419e-05/0.608, allocations: 0 / 0.9929 GB, free: 17.94 MB / 0.698 GB Notification: Model statistics after passing the front-end and creating the data structures used by the back-end: * Number of equations: 233 * Number of variables: 233 Notification: Performance of Generate backend data structure: time 0.002385/0.6104, allocations: 2.229 MB / 0.9951 GB, free: 16.46 MB / 0.698 GB Notification: Performance of prepare preOptimizeDAE: time 4.584e-05/0.6104, allocations: 11.98 kB / 0.9951 GB, free: 16.46 MB / 0.698 GB Notification: Performance of preOpt normalInlineFunction (simulation): time 0.0005117/0.6109, allocations: 237.7 kB / 0.9953 GB, free: 16.37 MB / 0.698 GB Notification: Performance of preOpt evaluateParameters (simulation): time 0.0007712/0.6117, allocations: 0.7091 MB / 0.996 GB, free: 16.05 MB / 0.698 GB Notification: Performance of preOpt simplifyIfEquations (simulation): time 5.499e-05/0.6118, allocations: 71.06 kB / 0.9961 GB, free: 16.05 MB / 0.698 GB Notification: Performance of preOpt expandDerOperator (simulation): time 0.0001364/0.6119, allocations: 116.8 kB / 0.9962 GB, free: 16.05 MB / 0.698 GB Notification: Performance of preOpt clockPartitioning (simulation): time 0.002046/0.6139, allocations: 1.989 MB / 0.9981 GB, free: 15.43 MB / 0.698 GB Notification: Performance of preOpt findStateOrder (simulation): time 5.139e-05/0.614, allocations: 10.5 kB / 0.9981 GB, free: 15.43 MB / 0.698 GB Notification: Performance of preOpt replaceEdgeChange (simulation): time 7.238e-05/0.6141, allocations: 42.58 kB / 0.9982 GB, free: 15.43 MB / 0.698 GB Notification: Performance of preOpt inlineArrayEqn (simulation): time 2.343e-05/0.6141, allocations: 22.67 kB / 0.9982 GB, free: 15.43 MB / 0.698 GB Notification: Performance of preOpt removeEqualRHS (simulation): time 0.001914/0.616, allocations: 1.804 MB / 1 GB, free: 14.91 MB / 0.698 GB Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.003219/0.6192, allocations: 2.447 MB / 1.002 GB, free: 14.23 MB / 0.698 GB Notification: Performance of preOpt comSubExp (simulation): time 0.002395/0.6216, allocations: 1.934 MB / 1.004 GB, free: 13.29 MB / 0.698 GB Notification: Performance of preOpt resolveLoops (simulation): time 0.001284/0.6229, allocations: 1.424 MB / 1.006 GB, free: 12.38 MB / 0.698 GB Notification: Performance of preOpt evalFunc (simulation): time 6.555e-05/0.623, allocations: 15.09 kB / 1.006 GB, free: 12.38 MB / 0.698 GB Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 0.002082/0.6251, allocations: 2.297 MB / 1.008 GB, free: 10.82 MB / 0.698 GB Notification: Performance of pre-optimization done (n=157): time 5.951e-06/0.6251, allocations: 0 / 1.008 GB, free: 10.82 MB / 0.698 GB Notification: Performance of matching and sorting (n=165): time 0.01024/0.6353, allocations: 9.292 MB / 1.017 GB, free: 4.922 MB / 0.698 GB Notification: Performance of inlineWhenForInitialization (initialization): time 0.0006128/0.6359, allocations: 1.031 MB / 1.018 GB, free: 3.711 MB / 0.698 GB Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.00149/0.6374, allocations: 0.9622 MB / 1.019 GB, free: 3.293 MB / 0.698 GB Notification: Performance of collectPreVariables (initialization): time 0.000184/0.6376, allocations: 77 kB / 1.019 GB, free: 3.234 MB / 0.698 GB Notification: Performance of collectInitialEqns (initialization): time 0.0003828/0.638, allocations: 0.4889 MB / 1.019 GB, free: 2.844 MB / 0.698 GB Notification: Performance of collectInitialBindings (initialization): time 0.0004504/0.6384, allocations: 0.5282 MB / 1.02 GB, free: 2.438 MB / 0.698 GB Notification: Performance of simplifyInitialFunctions (initialization): time 0.0005047/0.6389, allocations: 288.8 kB / 1.02 GB, free: 2.312 MB / 0.698 GB Notification: Performance of setup shared object (initialization): time 6.753e-05/0.639, allocations: 303.1 kB / 1.021 GB, free: 2.016 MB / 0.698 GB Notification: Performance of preBalanceInitialSystem (initialization): time 0.00166/0.6406, allocations: 1.62 MB / 1.022 GB, free: 0.9648 MB / 0.698 GB Notification: Performance of partitionIndependentBlocks (initialization): time 0.001803/0.6425, allocations: 2.029 MB / 1.024 GB, free: 15.41 MB / 0.7137 GB Notification: Performance of analyzeInitialSystem (initialization): time 0.006038/0.6485, allocations: 6.579 MB / 1.031 GB, free: 11.04 MB / 0.7137 GB Notification: Performance of solveInitialSystemEqSystem (initialization): time 1.819e-05/0.6485, allocations: 2.781 kB / 1.031 GB, free: 11.04 MB / 0.7137 GB Notification: Performance of matching and sorting (n=229) (initialization): time 0.003919/0.6524, allocations: 3.919 MB / 1.034 GB, free: 8.707 MB / 0.7137 GB Notification: Performance of prepare postOptimizeDAE: time 0.00023/0.6527, allocations: 0.5648 MB / 1.035 GB, free: 8.062 MB / 0.7137 GB Notification: Performance of postOpt simplifyComplexFunction (initialization): time 2.156e-05/0.6527, allocations: 10.06 kB / 1.035 GB, free: 8.062 MB / 0.7137 GB Notification: Performance of postOpt tearingSystem (initialization): time 5.242e-05/0.6527, allocations: 17.03 kB / 1.035 GB, free: 8.062 MB / 0.7137 GB Notification: Performance of postOpt solveSimpleEquations (initialization): time 0.0006923/0.6534, allocations: 323.9 kB / 1.035 GB, free: 8.047 MB / 0.7137 GB Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 3.089e-05/0.6535, allocations: 22.27 kB / 1.035 GB, free: 8.047 MB / 0.7137 GB Notification: Performance of postOpt simplifyAllExpressions (initialization): time 0.0008266/0.6543, allocations: 91.67 kB / 1.035 GB, free: 8.02 MB / 0.7137 GB Notification: Performance of postOpt collapseArrayExpressions (initialization): time 0.0002709/0.6546, allocations: 251.9 kB / 1.036 GB, free: 8 MB / 0.7137 GB Warning: Assuming fixed start value for the following 40 variables: patient4.dose.TotalCumulativeMass:VARIABLE(min = -1e-12 unit = \"kg\" fixed = true ) \"Total dose adminitrated by this source\" type: Real patient4.dose.absorptionLumen.AUC:VARIABLE(unit = \"kg.s/m3\" fixed = true ) \"area under curve\" type: Real patient4.dose.variableDose.TotalCumulativeMass:VARIABLE(min = -1e-12 unit = \"kg\" fixed = true ) \"Total dose adminitrated by this source\" type: Real patient4.central.AUC:VARIABLE(unit = \"kg.s/m3\" fixed = true ) \"area under curve\" type: Real patient_citalopram_CYP2C19_2.dose.TotalCumulativeMass:VARIABLE(min = -1e-12 unit = \"kg\" fixed = true ) \"Total dose adminitrated by this source\" type: Real patient_citalopram_CYP2C19_2.dose.absorptionLumen.AUC:VARIABLE(unit = \"kg.s/m3\" fixed = true ) \"area under curve\" type: Real patient_citalopram_CYP2C19_2.dose.variableDose.TotalCumulativeMass:VARIABLE(min = -1e-12 unit = \"kg\" fixed = true ) \"Total dose adminitrated by this source\" type: Real patient_citalopram_CYP2C19_2.central.AUC:VARIABLE(unit = \"kg.s/m3\" fixed = true ) \"area under curve\" type: Real patient2.dose.TotalCumulativeMass:VARIABLE(min = -1e-12 unit = \"kg\" fixed = true ) \"Total dose adminitrated by this source\" type: Real patient2.dose.absorptionLumen.AUC:VARIABLE(unit = \"kg.s/m3\" fixed = true ) \"area under curve\" type: Real patient2.dose.variableDose.TotalCumulativeMass:VARIABLE(min = -1e-12 unit = \"kg\" fixed = true ) \"Total dose adminitrated by this source\" type: Real patient2.central.AUC:VARIABLE(unit = \"kg.s/m3\" fixed = true ) \"area under curve\" type: Real patient_citalopram_normal.dose.TotalCumulativeMass:VARIABLE(min = -1e-12 unit = \"kg\" fixed = true ) \"Total dose adminitrated by this source\" type: Real patient_citalopram_normal.dose.absorptionLumen.AUC:VARIABLE(unit = \"kg.s/m3\" fixed = true ) \"area under curve\" type: Real patient_citalopram_normal.dose.variableDose.TotalCumulativeMass:VARIABLE(min = -1e-12 unit = \"kg\" fixed = true ) \"Total dose adminitrated by this source\" type: Real patient_citalopram_normal.central.AUC:VARIABLE(unit = \"kg.s/m3\" fixed = true ) \"area under curve\" type: Real patient_citalopram_normal.dose.absorptionLumen.Cmin:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real patient_citalopram_normal.dose.absorptionLumen.Cmax:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real patient_citalopram_normal.central.Cmin:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real patient_citalopram_normal.central.Cmax:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real patient2.dose.absorptionLumen.Cmin:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real patient2.dose.absorptionLumen.Cmax:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real patient2.central.Cmin:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real patient2.central.Cmax:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real patient_citalopram_CYP2C19_2.dose.absorptionLumen.Cmin:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real patient_citalopram_CYP2C19_2.dose.absorptionLumen.Cmax:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real patient_citalopram_CYP2C19_2.central.Cmin:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real patient_citalopram_CYP2C19_2.central.Cmax:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real patient4.dose.absorptionLumen.Cmin:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real patient4.dose.absorptionLumen.Cmax:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real patient4.central.Cmin:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real patient4.central.Cmax:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real patient_citalopram_normal.central.rising:DISCRETE(fixed = true protected = true ) type: Boolean patient_citalopram_normal.dose.absorptionLumen.rising:DISCRETE(fixed = true protected = true ) type: Boolean patient2.central.rising:DISCRETE(fixed = true protected = true ) type: Boolean patient2.dose.absorptionLumen.rising:DISCRETE(fixed = true protected = true ) type: Boolean patient_citalopram_CYP2C19_2.central.rising:DISCRETE(fixed = true protected = true ) type: Boolean patient_citalopram_CYP2C19_2.dose.absorptionLumen.rising:DISCRETE(fixed = true protected = true ) type: Boolean patient4.central.rising:DISCRETE(fixed = true protected = true ) type: Boolean patient4.dose.absorptionLumen.rising:DISCRETE(fixed = true protected = true ) type: Boolean Notification: Model statistics after passing the back-end for initialization: * Number of independent subsystems: 41 * Number of states: 0 () * Number of discrete variables: 92 ($PRE.patient_citalopram_normal.dose.absorptionLumen.Cmin,patient_citalopram_normal.dose.absorptionLumen.Cmin,$PRE.patient_citalopram_normal.dose.absorptionLumen.Cmax,patient_citalopram_normal.dose.absorptionLumen.Cmax,$PRE.patient_citalopram_normal.central.Cmin,patient_citalopram_normal.central.Cmin,$PRE.patient_citalopram_normal.central.Cmax,patient_citalopram_normal.central.Cmax,$PRE.patient2.dose.absorptionLumen.Cmin,patient2.dose.absorptionLumen.Cmin,$PRE.patient2.dose.absorptionLumen.Cmax,patient2.dose.absorptionLumen.Cmax,$PRE.patient2.central.Cmin,patient2.central.Cmin,$PRE.patient2.central.Cmax,patient2.central.Cmax,$PRE.patient_citalopram_CYP2C19_2.dose.absorptionLumen.Cmin,patient_citalopram_CYP2C19_2.dose.absorptionLumen.Cmin,$PRE.patient_citalopram_CYP2C19_2.dose.absorptionLumen.Cmax,patient_citalopram_CYP2C19_2.dose.absorptionLumen.Cmax,$PRE.patient_citalopram_CYP2C19_2.central.Cmin,patient_citalopram_CYP2C19_2.central.Cmin,$PRE.patient_citalopram_CYP2C19_2.central.Cmax,patient_citalopram_CYP2C19_2.central.Cmax,$PRE.patient4.dose.absorptionLumen.Cmin,patient4.dose.absorptionLumen.Cmin,$PRE.patient4.dose.absorptionLumen.Cmax,patient4.dose.absorptionLumen.Cmax,$PRE.patient4.central.Cmin,patient4.central.Cmin,$PRE.patient4.central.Cmax,patient4.central.Cmax,$PRE.patient_citalopram_normal.central.rising,$PRE.patient_citalopram_normal.dose.pulse.count,$PRE.patient_citalopram_normal.dose.pulse.T_start,$PRE.patient_citalopram_normal.dose.absorptionLumen.rising,patient_citalopram_normal.CYP2C19.status,patient_citalopram_normal.SLC22A2.status,patient_citalopram_normal.central.rising,patient_citalopram_normal.dose.pulse.count,patient_citalopram_normal.dose.pulse.T_start,patient_citalopram_normal.dose.absorptionLumen.rising,$whenCondition20,$whenCondition19,$whenCondition18,$whenCondition17,$whenCondition16,$PRE.patient2.central.rising,$PRE.patient2.dose.pulse.count,$PRE.patient2.dose.pulse.T_start,$PRE.patient2.dose.absorptionLumen.rising,patient2.CYP2C19.status,patient2.SLC22A2.status,patient2.central.rising,patient2.dose.pulse.count,patient2.dose.pulse.T_start,patient2.dose.absorptionLumen.rising,$whenCondition15,$whenCondition14,$whenCondition13,$whenCondition12,$whenCondition11,$PRE.patient_citalopram_CYP2C19_2.central.rising,$PRE.patient_citalopram_CYP2C19_2.dose.pulse.count,$PRE.patient_citalopram_CYP2C19_2.dose.pulse.T_start,$PRE.patient_citalopram_CYP2C19_2.dose.absorptionLumen.rising,patient_citalopram_CYP2C19_2.CYP2C19.status,patient_citalopram_CYP2C19_2.SLC22A2.status,patient_citalopram_CYP2C19_2.central.rising,patient_citalopram_CYP2C19_2.dose.pulse.count,patient_citalopram_CYP2C19_2.dose.pulse.T_start,patient_citalopram_CYP2C19_2.dose.absorptionLumen.rising,$whenCondition10,$whenCondition9,$whenCondition8,$whenCondition7,$whenCondition6,$PRE.patient4.central.rising,$PRE.patient4.dose.pulse.count,$PRE.patient4.dose.pulse.T_start,$PRE.patient4.dose.absorptionLumen.rising,patient4.CYP2C19.status,patient4.SLC22A2.status,patient4.central.rising,patient4.dose.pulse.count,patient4.dose.pulse.T_start,patient4.dose.absorptionLumen.rising,$whenCondition5,$whenCondition4,$whenCondition3,$whenCondition2,$whenCondition1) * Number of discrete states: 0 () * Number of clocked states: 0 () * Top-level inputs: 0 Notification: Strong component statistics for initialization (209): * Single equations (assignments): 189 * Array equations: 0 * Algorithm blocks: 20 * Record equations: 0 * When equations: 0 * If-equations: 0 * Equation systems (not torn): 0 * Torn equation systems: 0 * Mixed (continuous/discrete) equation systems: 0 Notification: Performance of prepare postOptimizeDAE: time 0.001246/0.6558, allocations: 1.101 MB / 1.037 GB, free: 7.105 MB / 0.7137 GB Notification: Performance of postOpt lateInlineFunction (simulation): time 0.0003379/0.6561, allocations: 161.9 kB / 1.037 GB, free: 7.031 MB / 0.7137 GB Notification: Performance of postOpt wrapFunctionCalls (simulation): time 0.0001979/0.6563, allocations: 144.6 kB / 1.037 GB, free: 6.938 MB / 0.7137 GB Notification: Performance of postOpt inlineArrayEqn (simulation): time 1.18e-05/0.6563, allocations: 14.28 kB / 1.037 GB, free: 6.938 MB / 0.7137 GB Notification: Performance of postOpt constantLinearSystem (simulation): time 2.675e-05/0.6564, allocations: 1.406 kB / 1.037 GB, free: 6.938 MB / 0.7137 GB Notification: Performance of postOpt simplifysemiLinear (simulation): time 1.443e-05/0.6564, allocations: 12.33 kB / 1.037 GB, free: 6.934 MB / 0.7137 GB Notification: Performance of postOpt removeSimpleEquations (simulation): time 0.00534/0.6617, allocations: 5.048 MB / 1.042 GB, free: 4.02 MB / 0.7137 GB Notification: Performance of postOpt simplifyComplexFunction (simulation): time 5.962e-06/0.6617, allocations: 0 / 1.042 GB, free: 4.02 MB / 0.7137 GB Notification: Performance of postOpt solveSimpleEquations (simulation): time 0.0006547/0.6624, allocations: 245.3 kB / 1.042 GB, free: 4.008 MB / 0.7137 GB Notification: Performance of postOpt tearingSystem (simulation): time 1.007e-05/0.6624, allocations: 5.75 kB / 1.042 GB, free: 4.008 MB / 0.7137 GB Notification: Performance of postOpt inputDerivativesUsed (simulation): time 0.0001101/0.6625, allocations: 63.17 kB / 1.042 GB, free: 3.984 MB / 0.7137 GB Notification: Performance of postOpt calculateStrongComponentJacobians (simulation): time 7.484e-06/0.6625, allocations: 5.562 kB / 1.042 GB, free: 3.984 MB / 0.7137 GB Notification: Performance of postOpt calculateStateSetsJacobians (simulation): time 4.038e-06/0.6625, allocations: 5.438 kB / 1.042 GB, free: 3.98 MB / 0.7137 GB Notification: Performance of postOpt symbolicJacobian (simulation): time 0.004844/0.6674, allocations: 5.856 MB / 1.048 GB, free: 492 kB / 0.7137 GB Notification: Performance of postOpt removeConstants (simulation): time 0.000587/0.668, allocations: 317.2 kB / 1.048 GB, free: 304 kB / 0.7137 GB Notification: Performance of postOpt simplifyTimeIndepFuncCalls (simulation): time 0.0002135/0.6682, allocations: 70.22 kB / 1.048 GB, free: 268 kB / 0.7137 GB Notification: Performance of postOpt simplifyAllExpressions (simulation): time 0.00045/0.6686, allocations: 77.55 kB / 1.048 GB, free: 248 kB / 0.7137 GB Notification: Performance of postOpt findZeroCrossings (simulation): time 0.0002426/0.6689, allocations: 164.2 kB / 1.049 GB, free: 148 kB / 0.7137 GB Notification: Performance of postOpt collapseArrayExpressions (simulation): time 0.0001949/0.6691, allocations: 228.2 kB / 1.049 GB, free: 52 kB / 0.7137 GB Notification: Performance of sorting global known variables: time 0.0007612/0.6698, allocations: 0.6805 MB / 1.049 GB, free: 15.64 MB / 0.7293 GB Notification: Performance of sort global known variables: time 9e-08/0.6698, allocations: 0 / 1.049 GB, free: 15.64 MB / 0.7293 GB Notification: Performance of remove unused functions: time 0.001211/0.671, allocations: 378.7 kB / 1.05 GB, free: 15.6 MB / 0.7293 GB Notification: Model statistics after passing the back-end for simulation: * Number of independent subsystems: 5 * Number of states: 28 (patient4.dose.TotalCumulativeMass,patient4.dose.absorptionLumen.C,patient4.dose.absorptionLumen.AUC,patient4.dose.variableDose.TotalCumulativeMass,patient4.central.C,patient4.central.AUC,patient4.elim.MExc,patient_citalopram_CYP2C19_2.dose.TotalCumulativeMass,patient_citalopram_CYP2C19_2.dose.absorptionLumen.C,patient_citalopram_CYP2C19_2.dose.absorptionLumen.AUC,patient_citalopram_CYP2C19_2.dose.variableDose.TotalCumulativeMass,patient_citalopram_CYP2C19_2.central.C,patient_citalopram_CYP2C19_2.central.AUC,patient_citalopram_CYP2C19_2.elim.MExc,patient2.dose.TotalCumulativeMass,patient2.dose.absorptionLumen.C,patient2.dose.absorptionLumen.AUC,patient2.dose.variableDose.TotalCumulativeMass,patient2.central.C,patient2.central.AUC,patient2.elim.MExc,patient_citalopram_normal.dose.TotalCumulativeMass,patient_citalopram_normal.dose.absorptionLumen.C,patient_citalopram_normal.dose.absorptionLumen.AUC,patient_citalopram_normal.dose.variableDose.TotalCumulativeMass,patient_citalopram_normal.central.C,patient_citalopram_normal.central.AUC,patient_citalopram_normal.elim.MExc) * Number of discrete variables: 60 ($whenCondition1,$whenCondition2,$whenCondition3,$whenCondition4,$whenCondition5,patient4.dose.absorptionLumen.Cmax,patient4.dose.absorptionLumen.Cmin,patient4.dose.absorptionLumen.rising,patient4.dose.pulse.T_start,patient4.dose.pulse.count,patient4.central.Cmax,patient4.central.Cmin,patient4.central.rising,patient4.SLC22A2.status,patient4.CYP2C19.status,$whenCondition6,$whenCondition7,$whenCondition8,$whenCondition9,$whenCondition10,patient_citalopram_CYP2C19_2.dose.absorptionLumen.Cmax,patient_citalopram_CYP2C19_2.dose.absorptionLumen.Cmin,patient_citalopram_CYP2C19_2.dose.absorptionLumen.rising,patient_citalopram_CYP2C19_2.dose.pulse.T_start,patient_citalopram_CYP2C19_2.dose.pulse.count,patient_citalopram_CYP2C19_2.central.Cmax,patient_citalopram_CYP2C19_2.central.Cmin,patient_citalopram_CYP2C19_2.central.rising,patient_citalopram_CYP2C19_2.SLC22A2.status,patient_citalopram_CYP2C19_2.CYP2C19.status,$whenCondition11,$whenCondition12,$whenCondition13,$whenCondition14,$whenCondition15,patient2.dose.absorptionLumen.Cmax,patient2.dose.absorptionLumen.Cmin,patient2.dose.absorptionLumen.rising,patient2.dose.pulse.T_start,patient2.dose.pulse.count,patient2.central.Cmax,patient2.central.Cmin,patient2.central.rising,patient2.SLC22A2.status,patient2.CYP2C19.status,$whenCondition16,$whenCondition17,$whenCondition18,$whenCondition19,$whenCondition20,patient_citalopram_normal.dose.absorptionLumen.Cmax,patient_citalopram_normal.dose.absorptionLumen.Cmin,patient_citalopram_normal.dose.absorptionLumen.rising,patient_citalopram_normal.dose.pulse.T_start,patient_citalopram_normal.dose.pulse.count,patient_citalopram_normal.central.Cmax,patient_citalopram_normal.central.Cmin,patient_citalopram_normal.central.rising,patient_citalopram_normal.SLC22A2.status,patient_citalopram_normal.CYP2C19.status) * Number of discrete states: 52 (patient_citalopram_normal.dose.pulse.count,patient_citalopram_normal.SLC22A2.status,patient_citalopram_normal.CYP2C19.status,patient_citalopram_normal.dose.absorptionLumen.Cmin,$whenCondition20,patient_citalopram_normal.dose.absorptionLumen.Cmax,$whenCondition19,patient_citalopram_normal.dose.absorptionLumen.rising,patient_citalopram_normal.central.Cmin,$whenCondition18,patient_citalopram_normal.central.Cmax,$whenCondition17,patient_citalopram_normal.central.rising,patient2.dose.pulse.count,patient2.SLC22A2.status,patient2.CYP2C19.status,patient2.dose.absorptionLumen.Cmin,$whenCondition15,patient2.dose.absorptionLumen.Cmax,$whenCondition14,patient2.dose.absorptionLumen.rising,patient2.central.Cmin,$whenCondition13,patient2.central.Cmax,$whenCondition12,patient2.central.rising,patient_citalopram_CYP2C19_2.dose.pulse.count,patient_citalopram_CYP2C19_2.SLC22A2.status,patient_citalopram_CYP2C19_2.CYP2C19.status,patient_citalopram_CYP2C19_2.dose.absorptionLumen.Cmin,$whenCondition10,patient_citalopram_CYP2C19_2.dose.absorptionLumen.Cmax,$whenCondition9,patient_citalopram_CYP2C19_2.dose.absorptionLumen.rising,patient_citalopram_CYP2C19_2.central.Cmin,$whenCondition8,patient_citalopram_CYP2C19_2.central.Cmax,$whenCondition7,patient_citalopram_CYP2C19_2.central.rising,patient4.dose.pulse.count,patient4.SLC22A2.status,patient4.CYP2C19.status,patient4.dose.absorptionLumen.Cmin,$whenCondition5,patient4.dose.absorptionLumen.Cmax,$whenCondition4,patient4.dose.absorptionLumen.rising,patient4.central.Cmin,$whenCondition3,patient4.central.Cmax,$whenCondition2,patient4.central.rising) * Number of clocked states: 0 () * Top-level inputs: 0 Notification: Strong component statistics for simulation (133): * Single equations (assignments): 109 * Array equations: 0 * Algorithm blocks: 16 * Record equations: 0 * When equations: 8 * If-equations: 0 * Equation systems (not torn): 0 * Torn equation systems: 0 * Mixed (continuous/discrete) equation systems: 0 Notification: Performance of Backend phase and start with SimCode phase: time 0.0004246/0.6714, allocations: 293.8 kB / 1.05 GB, free: 15.44 MB / 0.7293 GB Notification: Performance of simCode: created initialization part: time 0.00397/0.6754, allocations: 4.492 MB / 1.054 GB, free: 11.88 MB / 0.7293 GB Notification: Performance of simCode: created event and clocks part: time 3.847e-06/0.6754, allocations: 5.219 kB / 1.054 GB, free: 11.88 MB / 0.7293 GB Notification: Performance of simCode: created simulation system equations: time 0.001993/0.6774, allocations: 2.545 MB / 1.057 GB, free: 9.758 MB / 0.7293 GB Notification: Performance of simCode: created of all other equations (e.g. parameter, nominal, assert, etc): time 0.002049/0.6795, allocations: 367 kB / 1.057 GB, free: 9.586 MB / 0.7293 GB Notification: Performance of simCode: created linear, non-linear and system jacobian parts: time 0.008164/0.6876, allocations: 5.213 MB / 1.062 GB, free: 5.895 MB / 0.7293 GB Notification: Performance of simCode: some other stuff during SimCode phase: time 0.001217/0.6888, allocations: 0.6635 MB / 1.063 GB, free: 5.512 MB / 0.7293 GB Notification: Performance of simCode: all other stuff during SimCode phase: time 0.00042/0.6893, allocations: 90.02 kB / 1.063 GB, free: 5.496 MB / 0.7293 GB Notification: Performance of SimCode: time 1.473e-06/0.6893, allocations: 0 / 1.063 GB, free: 5.496 MB / 0.7293 GB Notification: Performance of Templates: time 0.03383/0.7231, allocations: 20.1 MB / 1.083 GB, free: 4.883 MB / 0.7449 GB " [Timeout remaining time 659] make -j1 -f Pharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.PKPG_Lithium_Experiment.makefile [Timeout 660] make -j1 -f Pharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.PKPG_Lithium_Experiment.makefile clang++ -std=c++17 -fopenmp=libomp -Winvalid-pch -O2 -g -DNDEBUG -fPIC -std=c++11 -DBOOST_ALL_DYN_LINK -DOMC_BUILD -DUSE_THREAD -I"." -I"/var/lib/jenkins/ws/OpenModelicaLibraryTestingWork/OpenModelica/OMCompiler/build/bin/../include/omc/cpp/" -I. -I"." -I"." -I"/var/lib/jenkins/ws/OpenModelicaLibraryTestingWork/OpenModelica/OMCompiler/build/include/omc/sundials" -DMEASURETIME_PROFILEBLOCKS -DUSE_LOGGER -c -o OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.PKPG_Lithium_ExperimentCalcHelperMain.o OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.PKPG_Lithium_ExperimentCalcHelperMain.cpp In file included from OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.PKPG_Lithium_ExperimentCalcHelperMain.cpp:29: ./OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.PKPG_Lithium_ExperimentInitialize.cpp:308:116: error: use of undeclared identifier 'patient4_P_CYP2C19_P_g_P_ph_P_intermediate_'; did you mean '_patient4_P_SLC22A2_P_g_P_ph_P_intermediate_'? 308 | _functions->Pharmacolibrary_Pharmacogenomics_Phenotypes_CYP2C19__Phenotype(_patient4_P_CYP2C19_P_g_P_ph_P_poor_, patient4_P_CYP2C19_P_g_P_ph_P_intermediate_, _patient4_P_CYP2C19_P_g_P_ph_P_rapid_, patient4_P_CYP2C19_P_g_P_ph_P_ultra_, _patient4_P_CYP2C19_P_g_P_ph_P_CLscale_, _patient4_P_CYP2C19_P_g_P_ph_P_Fscale_,tmp1); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | _patient4_P_SLC22A2_P_g_P_ph_P_intermediate_ ./OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.PKPG_Lithium_Experiment.h:531:36: note: '_patient4_P_SLC22A2_P_g_P_ph_P_intermediate_' declared here 531 | StatArrayDim1 _patient4_P_SLC22A2_P_g_P_ph_P_intermediate_; | ^ In file included from OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.PKPG_Lithium_ExperimentCalcHelperMain.cpp:29: ./OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.PKPG_Lithium_ExperimentInitialize.cpp:308:200: error: use of undeclared identifier 'patient4_P_CYP2C19_P_g_P_ph_P_ultra_'; did you mean '_patient4_P_CYP2C19_P_g_P_ph_P_poor_'? 308 | _functions->Pharmacolibrary_Pharmacogenomics_Phenotypes_CYP2C19__Phenotype(_patient4_P_CYP2C19_P_g_P_ph_P_poor_, patient4_P_CYP2C19_P_g_P_ph_P_intermediate_, _patient4_P_CYP2C19_P_g_P_ph_P_rapid_, patient4_P_CYP2C19_P_g_P_ph_P_ultra_, _patient4_P_CYP2C19_P_g_P_ph_P_CLscale_, _patient4_P_CYP2C19_P_g_P_ph_P_Fscale_,tmp1); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | _patient4_P_CYP2C19_P_g_P_ph_P_poor_ ./OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.PKPG_Lithium_Experiment.h:526:36: note: '_patient4_P_CYP2C19_P_g_P_ph_P_poor_' declared here 526 | StatArrayDim1 _patient4_P_CYP2C19_P_g_P_ph_P_poor_; | ^ In file included from OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.PKPG_Lithium_ExperimentCalcHelperMain.cpp:29: ./OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.PKPG_Lithium_ExperimentInitialize.cpp:312:116: error: use of undeclared identifier 'patient4_P_CYP2C19_P_g_P_ph_P_intermediate_'; did you mean '_patient4_P_SLC22A2_P_g_P_ph_P_intermediate_'? 312 | _functions->Pharmacolibrary_Pharmacogenomics_Phenotypes_CYP2C19__Phenotype(_patient4_P_CYP2C19_P_g_P_ph_P_poor_, patient4_P_CYP2C19_P_g_P_ph_P_intermediate_, _patient4_P_CYP2C19_P_g_P_ph_P_rapid_, patient4_P_CYP2C19_P_g_P_ph_P_ultra_, _patient4_P_CYP2C19_P_g_P_ph_P_CLscale_, _patient4_P_CYP2C19_P_g_P_ph_P_Fscale_,tmp3); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | _patient4_P_SLC22A2_P_g_P_ph_P_intermediate_ ./OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.PKPG_Lithium_Experiment.h:531:36: note: '_patient4_P_SLC22A2_P_g_P_ph_P_intermediate_' declared here 531 | StatArrayDim1 _patient4_P_SLC22A2_P_g_P_ph_P_intermediate_; | ^ In file included from OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.PKPG_Lithium_ExperimentCalcHelperMain.cpp:29: ./OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.PKPG_Lithium_ExperimentInitialize.cpp:312:200: error: use of undeclared identifier 'patient4_P_CYP2C19_P_g_P_ph_P_ultra_'; did you mean '_patient4_P_CYP2C19_P_g_P_ph_P_poor_'? 312 | _functions->Pharmacolibrary_Pharmacogenomics_Phenotypes_CYP2C19__Phenotype(_patient4_P_CYP2C19_P_g_P_ph_P_poor_, patient4_P_CYP2C19_P_g_P_ph_P_intermediate_, _patient4_P_CYP2C19_P_g_P_ph_P_rapid_, patient4_P_CYP2C19_P_g_P_ph_P_ultra_, _patient4_P_CYP2C19_P_g_P_ph_P_CLscale_, _patient4_P_CYP2C19_P_g_P_ph_P_Fscale_,tmp3); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | _patient4_P_CYP2C19_P_g_P_ph_P_poor_ ./OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.PKPG_Lithium_Experiment.h:526:36: note: '_patient4_P_CYP2C19_P_g_P_ph_P_poor_' declared here 526 | StatArrayDim1 _patient4_P_CYP2C19_P_g_P_ph_P_poor_; | ^ In file included from OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.PKPG_Lithium_ExperimentCalcHelperMain.cpp:29: ./OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.PKPG_Lithium_ExperimentInitialize.cpp:346:75: error: use of undeclared identifier 'patient4_P_SLC22A2_P_g_P_ph_P_poor_' 346 | _functions->Pharmacolibrary_Pharmacogenomics_Phenotypes_OCT2__Phenotype(patient4_P_SLC22A2_P_g_P_ph_P_poor_, _patient4_P_SLC22A2_P_g_P_ph_P_intermediate_, patient4_P_SLC22A2_P_g_P_ph_P_rapid_, patient4_P_SLC22A2_P_g_P_ph_P_ultra_, _patient4_P_SLC22A2_P_g_P_ph_P_CLscale_, _patient4_P_SLC22A2_P_g_P_ph_P_Fscale_,tmp5); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ./OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.PKPG_Lithium_ExperimentInitialize.cpp:346:158: error: use of undeclared identifier 'patient4_P_SLC22A2_P_g_P_ph_P_rapid_' 346 | _functions->Pharmacolibrary_Pharmacogenomics_Phenotypes_OCT2__Phenotype(patient4_P_SLC22A2_P_g_P_ph_P_poor_, _patient4_P_SLC22A2_P_g_P_ph_P_intermediate_, patient4_P_SLC22A2_P_g_P_ph_P_rapid_, patient4_P_SLC22A2_P_g_P_ph_P_ultra_, _patient4_P_SLC22A2_P_g_P_ph_P_CLscale_, _patient4_P_SLC22A2_P_g_P_ph_P_Fscale_,tmp5); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ./OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.PKPG_Lithium_ExperimentInitialize.cpp:346:196: error: use of undeclared identifier 'patient4_P_SLC22A2_P_g_P_ph_P_ultra_' 346 | _functions->Pharmacolibrary_Pharmacogenomics_Phenotypes_OCT2__Phenotype(patient4_P_SLC22A2_P_g_P_ph_P_poor_, _patient4_P_SLC22A2_P_g_P_ph_P_intermediate_, patient4_P_SLC22A2_P_g_P_ph_P_rapid_, patient4_P_SLC22A2_P_g_P_ph_P_ultra_, _patient4_P_SLC22A2_P_g_P_ph_P_CLscale_, _patient4_P_SLC22A2_P_g_P_ph_P_Fscale_,tmp5); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ./OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.PKPG_Lithium_ExperimentInitialize.cpp:350:75: error: use of undeclared identifier 'patient4_P_SLC22A2_P_g_P_ph_P_poor_' 350 | _functions->Pharmacolibrary_Pharmacogenomics_Phenotypes_OCT2__Phenotype(patient4_P_SLC22A2_P_g_P_ph_P_poor_, _patient4_P_SLC22A2_P_g_P_ph_P_intermediate_, patient4_P_SLC22A2_P_g_P_ph_P_rapid_, patient4_P_SLC22A2_P_g_P_ph_P_ultra_, _patient4_P_SLC22A2_P_g_P_ph_P_CLscale_, _patient4_P_SLC22A2_P_g_P_ph_P_Fscale_,tmp7); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ./OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.PKPG_Lithium_ExperimentInitialize.cpp:350:158: error: use of undeclared identifier 'patient4_P_SLC22A2_P_g_P_ph_P_rapid_' 350 | _functions->Pharmacolibrary_Pharmacogenomics_Phenotypes_OCT2__Phenotype(patient4_P_SLC22A2_P_g_P_ph_P_poor_, _patient4_P_SLC22A2_P_g_P_ph_P_intermediate_, patient4_P_SLC22A2_P_g_P_ph_P_rapid_, patient4_P_SLC22A2_P_g_P_ph_P_ultra_, _patient4_P_SLC22A2_P_g_P_ph_P_CLscale_, _patient4_P_SLC22A2_P_g_P_ph_P_Fscale_,tmp7); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ./OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.PKPG_Lithium_ExperimentInitialize.cpp:350:196: error: use of undeclared identifier 'patient4_P_SLC22A2_P_g_P_ph_P_ultra_' 350 | _functions->Pharmacolibrary_Pharmacogenomics_Phenotypes_OCT2__Phenotype(patient4_P_SLC22A2_P_g_P_ph_P_poor_, _patient4_P_SLC22A2_P_g_P_ph_P_intermediate_, patient4_P_SLC22A2_P_g_P_ph_P_rapid_, patient4_P_SLC22A2_P_g_P_ph_P_ultra_, _patient4_P_SLC22A2_P_g_P_ph_P_CLscale_, _patient4_P_SLC22A2_P_g_P_ph_P_Fscale_,tmp7); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ./OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.PKPG_Lithium_ExperimentInitialize.cpp:751:136: error: use of undeclared identifier 'patient_citalopram_CYP2C19_2_P_CYP2C19_P_g_P_ph_P_intermediate_'; did you mean '_patient_citalopram_CYP2C19_2_P_SLC22A2_P_g_P_ph_P_intermediate_'? 751 | _functions->Pharmacolibrary_Pharmacogenomics_Phenotypes_CYP2C19__Phenotype(_patient_citalopram_CYP2C19_2_P_CYP2C19_P_g_P_ph_P_poor_, patient_citalopram_CYP2C19_2_P_CYP2C19_P_g_P_ph_P_intermediate_, _patient_citalopram_CYP2C19_2_P_CYP2C19_P_g_P_ph_P_rapid_, patient_citalopram_CYP2C19_2_P_CYP2C19_P_g_P_ph_P_ultra_, _patient_citalopram_CYP2C19_2_P_CYP2C19_P_g_P_ph_P_CLscale_, _patient_citalopram_CYP2C19_2_P_CYP2C19_P_g_P_ph_P_Fscale_,tmp11); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | _patient_citalopram_CYP2C19_2_P_SLC22A2_P_g_P_ph_P_intermediate_ ./OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.PKPG_Lithium_Experiment.h:540:36: note: '_patient_citalopram_CYP2C19_2_P_SLC22A2_P_g_P_ph_P_intermediate_' declared here 540 | StatArrayDim1 _patient_citalopram_CYP2C19_2_P_SLC22A2_P_g_P_ph_P_intermediate_; | ^ In file included from OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.PKPG_Lithium_ExperimentCalcHelperMain.cpp:29: ./OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.PKPG_Lithium_ExperimentInitialize.cpp:751:260: error: use of undeclared identifier 'patient_citalopram_CYP2C19_2_P_CYP2C19_P_g_P_ph_P_ultra_'; did you mean '_patient_citalopram_CYP2C19_2_P_CYP2C19_P_g_P_ph_P_poor_'? 751 | _functions->Pharmacolibrary_Pharmacogenomics_Phenotypes_CYP2C19__Phenotype(_patient_citalopram_CYP2C19_2_P_CYP2C19_P_g_P_ph_P_poor_, patient_citalopram_CYP2C19_2_P_CYP2C19_P_g_P_ph_P_intermediate_, _patient_citalopram_CYP2C19_2_P_CYP2C19_P_g_P_ph_P_rapid_, patient_citalopram_CYP2C19_2_P_CYP2C19_P_g_P_ph_P_ultra_, _patient_citalopram_CYP2C19_2_P_CYP2C19_P_g_P_ph_P_CLscale_, _patient_citalopram_CYP2C19_2_P_CYP2C19_P_g_P_ph_P_Fscale_,tmp11); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | _patient_citalopram_CYP2C19_2_P_CYP2C19_P_g_P_ph_P_poor_ ./OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.PKPG_Lithium_Experiment.h:535:36: note: '_patient_citalopram_CYP2C19_2_P_CYP2C19_P_g_P_ph_P_poor_' declared here 535 | StatArrayDim1 _patient_citalopram_CYP2C19_2_P_CYP2C19_P_g_P_ph_P_poor_; | ^ In file included from OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.PKPG_Lithium_ExperimentCalcHelperMain.cpp:29: ./OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.PKPG_Lithium_ExperimentInitialize.cpp:755:136: error: use of undeclared identifier 'patient_citalopram_CYP2C19_2_P_CYP2C19_P_g_P_ph_P_intermediate_'; did you mean '_patient_citalopram_CYP2C19_2_P_SLC22A2_P_g_P_ph_P_intermediate_'? 755 | _functions->Pharmacolibrary_Pharmacogenomics_Phenotypes_CYP2C19__Phenotype(_patient_citalopram_CYP2C19_2_P_CYP2C19_P_g_P_ph_P_poor_, patient_citalopram_CYP2C19_2_P_CYP2C19_P_g_P_ph_P_intermediate_, _patient_citalopram_CYP2C19_2_P_CYP2C19_P_g_P_ph_P_rapid_, patient_citalopram_CYP2C19_2_P_CYP2C19_P_g_P_ph_P_ultra_, _patient_citalopram_CYP2C19_2_P_CYP2C19_P_g_P_ph_P_CLscale_, _patient_citalopram_CYP2C19_2_P_CYP2C19_P_g_P_ph_P_Fscale_,tmp13); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | _patient_citalopram_CYP2C19_2_P_SLC22A2_P_g_P_ph_P_intermediate_ ./OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.PKPG_Lithium_Experiment.h:540:36: note: '_patient_citalopram_CYP2C19_2_P_SLC22A2_P_g_P_ph_P_intermediate_' declared here 540 | StatArrayDim1 _patient_citalopram_CYP2C19_2_P_SLC22A2_P_g_P_ph_P_intermediate_; | ^ In file included from OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.PKPG_Lithium_ExperimentCalcHelperMain.cpp:29: ./OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.PKPG_Lithium_ExperimentInitialize.cpp:755:260: error: use of undeclared identifier 'patient_citalopram_CYP2C19_2_P_CYP2C19_P_g_P_ph_P_ultra_'; did you mean '_patient_citalopram_CYP2C19_2_P_CYP2C19_P_g_P_ph_P_poor_'? 755 | _functions->Pharmacolibrary_Pharmacogenomics_Phenotypes_CYP2C19__Phenotype(_patient_citalopram_CYP2C19_2_P_CYP2C19_P_g_P_ph_P_poor_, patient_citalopram_CYP2C19_2_P_CYP2C19_P_g_P_ph_P_intermediate_, _patient_citalopram_CYP2C19_2_P_CYP2C19_P_g_P_ph_P_rapid_, patient_citalopram_CYP2C19_2_P_CYP2C19_P_g_P_ph_P_ultra_, _patient_citalopram_CYP2C19_2_P_CYP2C19_P_g_P_ph_P_CLscale_, _patient_citalopram_CYP2C19_2_P_CYP2C19_P_g_P_ph_P_Fscale_,tmp13); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | _patient_citalopram_CYP2C19_2_P_CYP2C19_P_g_P_ph_P_poor_ ./OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.PKPG_Lithium_Experiment.h:535:36: note: '_patient_citalopram_CYP2C19_2_P_CYP2C19_P_g_P_ph_P_poor_' declared here 535 | StatArrayDim1 _patient_citalopram_CYP2C19_2_P_CYP2C19_P_g_P_ph_P_poor_; | ^ In file included from OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.PKPG_Lithium_ExperimentCalcHelperMain.cpp:29: ./OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.PKPG_Lithium_ExperimentInitialize.cpp:789:75: error: use of undeclared identifier 'patient_citalopram_CYP2C19_2_P_SLC22A2_P_g_P_ph_P_poor_' 789 | _functions->Pharmacolibrary_Pharmacogenomics_Phenotypes_OCT2__Phenotype(patient_citalopram_CYP2C19_2_P_SLC22A2_P_g_P_ph_P_poor_, _patient_citalopram_CYP2C19_2_P_SLC22A2_P_g_P_ph_P_intermediate_, patient_citalopram_CYP2C19_2_P_SLC22A2_P_g_P_ph_P_rapid_, patient_citalopram_CYP2C19_2_P_SLC22A2_P_g_P_ph_P_ultra_, _patient_citalopram_CYP2C19_2_P_SLC22A2_P_g_P_ph_P_CLscale_, _patient_citalopram_CYP2C19_2_P_SLC22A2_P_g_P_ph_P_Fscale_,tmp15); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ./OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.PKPG_Lithium_ExperimentInitialize.cpp:789:198: error: use of undeclared identifier 'patient_citalopram_CYP2C19_2_P_SLC22A2_P_g_P_ph_P_rapid_' 789 | _functions->Pharmacolibrary_Pharmacogenomics_Phenotypes_OCT2__Phenotype(patient_citalopram_CYP2C19_2_P_SLC22A2_P_g_P_ph_P_poor_, _patient_citalopram_CYP2C19_2_P_SLC22A2_P_g_P_ph_P_intermediate_, patient_citalopram_CYP2C19_2_P_SLC22A2_P_g_P_ph_P_rapid_, patient_citalopram_CYP2C19_2_P_SLC22A2_P_g_P_ph_P_ultra_, _patient_citalopram_CYP2C19_2_P_SLC22A2_P_g_P_ph_P_CLscale_, _patient_citalopram_CYP2C19_2_P_SLC22A2_P_g_P_ph_P_Fscale_,tmp15); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ./OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.PKPG_Lithium_ExperimentInitialize.cpp:789:256: error: use of undeclared identifier 'patient_citalopram_CYP2C19_2_P_SLC22A2_P_g_P_ph_P_ultra_' 789 | _functions->Pharmacolibrary_Pharmacogenomics_Phenotypes_OCT2__Phenotype(patient_citalopram_CYP2C19_2_P_SLC22A2_P_g_P_ph_P_poor_, _patient_citalopram_CYP2C19_2_P_SLC22A2_P_g_P_ph_P_intermediate_, patient_citalopram_CYP2C19_2_P_SLC22A2_P_g_P_ph_P_rapid_, patient_citalopram_CYP2C19_2_P_SLC22A2_P_g_P_ph_P_ultra_, _patient_citalopram_CYP2C19_2_P_SLC22A2_P_g_P_ph_P_CLscale_, _patient_citalopram_CYP2C19_2_P_SLC22A2_P_g_P_ph_P_Fscale_,tmp15); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ./OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.PKPG_Lithium_ExperimentInitialize.cpp:793:75: error: use of undeclared identifier 'patient_citalopram_CYP2C19_2_P_SLC22A2_P_g_P_ph_P_poor_' 793 | _functions->Pharmacolibrary_Pharmacogenomics_Phenotypes_OCT2__Phenotype(patient_citalopram_CYP2C19_2_P_SLC22A2_P_g_P_ph_P_poor_, _patient_citalopram_CYP2C19_2_P_SLC22A2_P_g_P_ph_P_intermediate_, patient_citalopram_CYP2C19_2_P_SLC22A2_P_g_P_ph_P_rapid_, patient_citalopram_CYP2C19_2_P_SLC22A2_P_g_P_ph_P_ultra_, _patient_citalopram_CYP2C19_2_P_SLC22A2_P_g_P_ph_P_CLscale_, _patient_citalopram_CYP2C19_2_P_SLC22A2_P_g_P_ph_P_Fscale_,tmp17); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ./OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.PKPG_Lithium_ExperimentInitialize.cpp:793:198: error: use of undeclared identifier 'patient_citalopram_CYP2C19_2_P_SLC22A2_P_g_P_ph_P_rapid_' 793 | _functions->Pharmacolibrary_Pharmacogenomics_Phenotypes_OCT2__Phenotype(patient_citalopram_CYP2C19_2_P_SLC22A2_P_g_P_ph_P_poor_, _patient_citalopram_CYP2C19_2_P_SLC22A2_P_g_P_ph_P_intermediate_, patient_citalopram_CYP2C19_2_P_SLC22A2_P_g_P_ph_P_rapid_, patient_citalopram_CYP2C19_2_P_SLC22A2_P_g_P_ph_P_ultra_, _patient_citalopram_CYP2C19_2_P_SLC22A2_P_g_P_ph_P_CLscale_, _patient_citalopram_CYP2C19_2_P_SLC22A2_P_g_P_ph_P_Fscale_,tmp17); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ fatal error: too many errors emitted, stopping now [-ferror-limit=] 20 errors generated. make: *** [: OMCppPharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.PKPG_Lithium_ExperimentCalcHelperMain.o] Error 1 [Calling os._exit(0), Time elapsed: 5.979695464950055]