Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr Pharmacolibrary_Pharmacolibrary.Examples.Paracetamol_Experiment.conf.json loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo): time 0.001589/0.001589, allocations: 100.4 kB / 19.7 MB, free: 440 kB / 13.93 MB " [Timeout remaining time 180] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo): time 0.001745/0.001745, allocations: 215.3 kB / 23 MB, free: 2.945 MB / 13.93 MB " [Timeout remaining time 180] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo): time 1.074/1.074, allocations: 230.6 MB / 256.8 MB, free: 9.605 MB / 202.7 MB " [Timeout remaining time 179] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/package.mo", uses=false) [Timeout 180] "[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/Examples/package.order:0:0-0:0:readonly] Warning: The package.order file does not list all .mo files and directories (containing package.mo) present in its directory. Missing names are: Paracetamol_Experiment Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/package.mo): time 1.819/1.819, allocations: 334.2 MB / 0.6323 GB, free: 7.879 MB / 442.7 MB " [Timeout remaining time 178] Using package Pharmacolibrary with version 25.09 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/package.mo) Using package Modelica with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo) Using package Complex with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo) Using package ModelicaServices with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo) Running command: translateModel(Pharmacolibrary.Examples.Paracetamol_Experiment,tolerance=1e-06,outputFormat="empty",numberOfIntervals=8640,variableFilter="",fileNamePrefix="Pharmacolibrary_Pharmacolibrary.Examples.Paracetamol_Experiment") translateModel(Pharmacolibrary.Examples.Paracetamol_Experiment,tolerance=1e-06,outputFormat="empty",numberOfIntervals=8640,variableFilter="",fileNamePrefix="Pharmacolibrary_Pharmacolibrary.Examples.Paracetamol_Experiment") [Timeout 660] "Notification: Pharmacolibrary requested package Modelica of version 4.0.0. Modelica 4.1.0 is used instead which states that it is fully compatible without conversion script needed. Notification: Performance of FrontEnd - loaded program: time 0.001406/0.001406, allocations: 75.86 kB / 0.867 GB, free: 7.93 MB / 0.573 GB Notification: Performance of FrontEnd - Absyn->SCode: time 0.171/0.1724, allocations: 112.8 MB / 0.9772 GB, free: 6.852 MB / 0.6824 GB Notification: Performance of NFInst.instantiate(Pharmacolibrary.Examples.Paracetamol_Experiment): time 0.005197/0.1776, allocations: 6.325 MB / 0.9834 GB, free: 0.4961 MB / 0.6824 GB Notification: Performance of NFInst.instExpressions: time 0.002332/0.1799, allocations: 1.29 MB / 0.9846 GB, free: 15.2 MB / 0.698 GB Notification: Performance of NFInst.updateImplicitVariability: time 0.000305/0.1802, allocations: 11.94 kB / 0.9846 GB, free: 15.19 MB / 0.698 GB Notification: Performance of NFTyping.typeComponents: time 0.0002245/0.1804, allocations: 110.8 kB / 0.9847 GB, free: 15.08 MB / 0.698 GB Notification: Performance of NFTyping.typeBindings: time 0.0004721/0.1809, allocations: 317.4 kB / 0.985 GB, free: 14.77 MB / 0.698 GB Notification: Performance of NFTyping.typeClassSections: time 0.000519/0.1814, allocations: 287.7 kB / 0.9853 GB, free: 14.49 MB / 0.698 GB Notification: Performance of NFFlatten.flatten: time 0.0009095/0.1823, allocations: 1.179 MB / 0.9865 GB, free: 13.3 MB / 0.698 GB Notification: Performance of NFFlatten.resolveConnections: time 0.00028/0.1826, allocations: 171.9 kB / 0.9866 GB, free: 13.12 MB / 0.698 GB Notification: Performance of NFEvalConstants.evaluate: time 0.0004139/0.183, allocations: 414.6 kB / 0.987 GB, free: 12.71 MB / 0.698 GB Notification: Performance of NFSimplifyModel.simplify: time 0.0004792/0.1835, allocations: 410.1 kB / 0.9874 GB, free: 12.31 MB / 0.698 GB Notification: Performance of NFPackage.collectConstants: time 0.0001072/0.1836, allocations: 112 kB / 0.9875 GB, free: 12.2 MB / 0.698 GB Notification: Performance of NFFlatten.collectFunctions: time 0.0001156/0.1837, allocations: 108 kB / 0.9876 GB, free: 12.1 MB / 0.698 GB Notification: Performance of NFScalarize.scalarize: time 0.0001/0.1838, allocations: 199.3 kB / 0.9878 GB, free: 11.9 MB / 0.698 GB Notification: Performance of NFVerifyModel.verify: time 0.0002912/0.1841, allocations: 414.4 kB / 0.9882 GB, free: 11.5 MB / 0.698 GB Notification: Performance of NFConvertDAE.convert: time 0.3755/0.5596, allocations: 1.22 MB / 0.9894 GB, free: 20.76 MB / 0.698 GB Notification: Performance of FrontEnd - DAE generated: time 5.751e-06/0.5596, allocations: 0 / 0.9894 GB, free: 20.76 MB / 0.698 GB Notification: Performance of FrontEnd: time 2.194e-06/0.5596, allocations: 2.406 kB / 0.9894 GB, free: 20.76 MB / 0.698 GB Notification: Performance of Transformations before backend: time 1.191e-05/0.5596, allocations: 0 / 0.9894 GB, free: 20.76 MB / 0.698 GB Notification: Model statistics after passing the front-end and creating the data structures used by the back-end: * Number of equations: 144 * Number of variables: 144 Notification: Performance of Generate backend data structure: time 0.001316/0.5609, allocations: 1.326 MB / 0.9907 GB, free: 19.9 MB / 0.698 GB Notification: Performance of prepare preOptimizeDAE: time 3.916e-05/0.561, allocations: 10.33 kB / 0.9907 GB, free: 19.9 MB / 0.698 GB Notification: Performance of preOpt normalInlineFunction (simulation): time 0.0001072/0.5611, allocations: 93.39 kB / 0.9908 GB, free: 19.85 MB / 0.698 GB Notification: Performance of preOpt evaluateParameters (simulation): time 0.000459/0.5615, allocations: 455.4 kB / 0.9912 GB, free: 19.63 MB / 0.698 GB Notification: Performance of preOpt simplifyIfEquations (simulation): time 2.687e-05/0.5616, allocations: 42.69 kB / 0.9913 GB, free: 19.63 MB / 0.698 GB Notification: Performance of preOpt expandDerOperator (simulation): time 8.323e-05/0.5616, allocations: 74.31 kB / 0.9913 GB, free: 19.63 MB / 0.698 GB Notification: Performance of preOpt clockPartitioning (simulation): time 0.0008629/0.5625, allocations: 0.8527 MB / 0.9922 GB, free: 19.34 MB / 0.698 GB Notification: Performance of preOpt findStateOrder (simulation): time 2.578e-05/0.5625, allocations: 10.39 kB / 0.9922 GB, free: 19.34 MB / 0.698 GB Notification: Performance of preOpt replaceEdgeChange (simulation): time 3.711e-05/0.5626, allocations: 26.05 kB / 0.9922 GB, free: 19.34 MB / 0.698 GB Notification: Performance of preOpt inlineArrayEqn (simulation): time 9.859e-06/0.5626, allocations: 11.78 kB / 0.9922 GB, free: 19.34 MB / 0.698 GB Notification: Performance of preOpt removeEqualRHS (simulation): time 0.0008021/0.5634, allocations: 0.7475 MB / 0.993 GB, free: 19.15 MB / 0.698 GB Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.001541/0.5649, allocations: 1.753 MB / 0.9947 GB, free: 18.45 MB / 0.698 GB Notification: Performance of preOpt comSubExp (simulation): time 0.001003/0.5659, allocations: 0.808 MB / 0.9955 GB, free: 18.18 MB / 0.698 GB Notification: Performance of preOpt resolveLoops (simulation): time 0.0004418/0.5664, allocations: 484.3 kB / 0.9959 GB, free: 17.97 MB / 0.698 GB Notification: Performance of preOpt evalFunc (simulation): time 3.648e-05/0.5664, allocations: 11.34 kB / 0.9959 GB, free: 17.97 MB / 0.698 GB Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 0.0007681/0.5672, allocations: 1.098 MB / 0.997 GB, free: 17.33 MB / 0.698 GB Notification: Performance of pre-optimization done (n=99): time 2.504e-06/0.5672, allocations: 2.969 kB / 0.997 GB, free: 17.33 MB / 0.698 GB Notification: Performance of matching and sorting (n=105): time 0.003479/0.5707, allocations: 3.546 MB / 1 GB, free: 15.66 MB / 0.698 GB Notification: Performance of inlineWhenForInitialization (initialization): time 9.61e-05/0.5708, allocations: 0.5992 MB / 1.001 GB, free: 14.97 MB / 0.698 GB Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.0004937/0.5712, allocations: 0.5204 MB / 1.002 GB, free: 14.85 MB / 0.698 GB Notification: Performance of collectPreVariables (initialization): time 5.49e-05/0.5713, allocations: 60.8 kB / 1.002 GB, free: 14.82 MB / 0.698 GB Notification: Performance of collectInitialEqns (initialization): time 0.0001392/0.5714, allocations: 300.8 kB / 1.002 GB, free: 14.67 MB / 0.698 GB Notification: Performance of collectInitialBindings (initialization): time 0.0001571/0.5716, allocations: 355.5 kB / 1.002 GB, free: 14.45 MB / 0.698 GB Notification: Performance of simplifyInitialFunctions (initialization): time 0.0001968/0.5718, allocations: 185 kB / 1.002 GB, free: 14.43 MB / 0.698 GB Notification: Performance of setup shared object (initialization): time 9.051e-05/0.5719, allocations: 398.6 kB / 1.003 GB, free: 14.12 MB / 0.698 GB Notification: Performance of preBalanceInitialSystem (initialization): time 0.0005558/0.5724, allocations: 0.6427 MB / 1.003 GB, free: 13.81 MB / 0.698 GB Notification: Performance of partitionIndependentBlocks (initialization): time 0.0006455/0.5731, allocations: 0.9608 MB / 1.004 GB, free: 13.12 MB / 0.698 GB Notification: Performance of analyzeInitialSystem (initialization): time 0.002487/0.5756, allocations: 2.487 MB / 1.007 GB, free: 11.41 MB / 0.698 GB Notification: Performance of solveInitialSystemEqSystem (initialization): time 1.31e-05/0.5756, allocations: 8.031 kB / 1.007 GB, free: 11.41 MB / 0.698 GB Notification: Performance of matching and sorting (n=159) (initialization): time 0.001997/0.5776, allocations: 1.738 MB / 1.008 GB, free: 10.36 MB / 0.698 GB Notification: Performance of prepare postOptimizeDAE: time 0.0001169/0.5777, allocations: 268.3 kB / 1.009 GB, free: 10.07 MB / 0.698 GB Notification: Performance of postOpt simplifyComplexFunction (initialization): time 1.455e-05/0.5777, allocations: 8.656 kB / 1.009 GB, free: 10.07 MB / 0.698 GB Notification: Performance of postOpt tearingSystem (initialization): time 3.031e-05/0.5777, allocations: 14.48 kB / 1.009 GB, free: 10.07 MB / 0.698 GB Notification: Performance of postOpt solveSimpleEquations (initialization): time 0.0005553/0.5783, allocations: 247 kB / 1.009 GB, free: 10.06 MB / 0.698 GB Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 2.355e-05/0.5783, allocations: 19.05 kB / 1.009 GB, free: 10.06 MB / 0.698 GB Notification: Performance of postOpt simplifyAllExpressions (initialization): time 0.0004867/0.5788, allocations: 66.33 kB / 1.009 GB, free: 10.04 MB / 0.698 GB Notification: Performance of postOpt collapseArrayExpressions (initialization): time 8.611e-05/0.5789, allocations: 50.97 kB / 1.009 GB, free: 10.03 MB / 0.698 GB Warning: Assuming fixed start value for the following 30 variables: rapid_met.central.AUC:VARIABLE(unit = \"kg.s/m3\" fixed = true ) \"area under curve\" type: Real rapid_met.periodicDose.TotalCumulativeMass:VARIABLE(min = -1e-12 unit = \"kg\" fixed = true ) \"Total dose adminitrated by this source\" type: Real rapid_met.periodicDose.absorptionLumen.AUC:VARIABLE(unit = \"kg.s/m3\" fixed = true ) \"area under curve\" type: Real rapid_met.periodicDose.variableDose.TotalCumulativeMass:VARIABLE(min = -1e-12 unit = \"kg\" fixed = true ) \"Total dose adminitrated by this source\" type: Real poor_met.central.AUC:VARIABLE(unit = \"kg.s/m3\" fixed = true ) \"area under curve\" type: Real poor_met.periodicDose.TotalCumulativeMass:VARIABLE(min = -1e-12 unit = \"kg\" fixed = true ) \"Total dose adminitrated by this source\" type: Real poor_met.periodicDose.absorptionLumen.AUC:VARIABLE(unit = \"kg.s/m3\" fixed = true ) \"area under curve\" type: Real poor_met.periodicDose.variableDose.TotalCumulativeMass:VARIABLE(min = -1e-12 unit = \"kg\" fixed = true ) \"Total dose adminitrated by this source\" type: Real normal.central.AUC:VARIABLE(unit = \"kg.s/m3\" fixed = true ) \"area under curve\" type: Real normal.periodicDose.TotalCumulativeMass:VARIABLE(min = -1e-12 unit = \"kg\" fixed = true ) \"Total dose adminitrated by this source\" type: Real normal.periodicDose.absorptionLumen.AUC:VARIABLE(unit = \"kg.s/m3\" fixed = true ) \"area under curve\" type: Real normal.periodicDose.variableDose.TotalCumulativeMass:VARIABLE(min = -1e-12 unit = \"kg\" fixed = true ) \"Total dose adminitrated by this source\" type: Real normal.central.Cmin:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real normal.central.Cmax:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real normal.periodicDose.absorptionLumen.Cmin:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real normal.periodicDose.absorptionLumen.Cmax:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real poor_met.central.Cmin:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real poor_met.central.Cmax:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real poor_met.periodicDose.absorptionLumen.Cmin:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real poor_met.periodicDose.absorptionLumen.Cmax:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real rapid_met.central.Cmin:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real rapid_met.central.Cmax:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real rapid_met.periodicDose.absorptionLumen.Cmin:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real rapid_met.periodicDose.absorptionLumen.Cmax:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real normal.periodicDose.absorptionLumen.rising:DISCRETE(fixed = true protected = true ) type: Boolean normal.central.rising:DISCRETE(fixed = true protected = true ) type: Boolean poor_met.periodicDose.absorptionLumen.rising:DISCRETE(fixed = true protected = true ) type: Boolean poor_met.central.rising:DISCRETE(fixed = true protected = true ) type: Boolean rapid_met.periodicDose.absorptionLumen.rising:DISCRETE(fixed = true protected = true ) type: Boolean rapid_met.central.rising:DISCRETE(fixed = true protected = true ) type: Boolean Notification: Model statistics after passing the back-end for initialization: * Number of independent subsystems: 36 * Number of states: 0 () * Number of discrete variables: 63 ($PRE.normal.central.Cmin,normal.central.Cmin,$PRE.normal.central.Cmax,normal.central.Cmax,$PRE.normal.periodicDose.absorptionLumen.Cmin,normal.periodicDose.absorptionLumen.Cmin,$PRE.normal.periodicDose.absorptionLumen.Cmax,normal.periodicDose.absorptionLumen.Cmax,$PRE.poor_met.central.Cmin,poor_met.central.Cmin,$PRE.poor_met.central.Cmax,poor_met.central.Cmax,$PRE.poor_met.periodicDose.absorptionLumen.Cmin,poor_met.periodicDose.absorptionLumen.Cmin,$PRE.poor_met.periodicDose.absorptionLumen.Cmax,poor_met.periodicDose.absorptionLumen.Cmax,$PRE.rapid_met.central.Cmin,rapid_met.central.Cmin,$PRE.rapid_met.central.Cmax,rapid_met.central.Cmax,$PRE.rapid_met.periodicDose.absorptionLumen.Cmin,rapid_met.periodicDose.absorptionLumen.Cmin,$PRE.rapid_met.periodicDose.absorptionLumen.Cmax,rapid_met.periodicDose.absorptionLumen.Cmax,$PRE.normal.periodicDose.pulse.count,$PRE.normal.periodicDose.pulse.T_start,$PRE.normal.periodicDose.absorptionLumen.rising,$PRE.normal.central.rising,normal.periodicDose.pulse.count,normal.periodicDose.pulse.T_start,normal.periodicDose.absorptionLumen.rising,normal.central.rising,$whenCondition15,$whenCondition14,$whenCondition13,$whenCondition12,$whenCondition11,$PRE.poor_met.periodicDose.pulse.count,$PRE.poor_met.periodicDose.pulse.T_start,$PRE.poor_met.periodicDose.absorptionLumen.rising,$PRE.poor_met.central.rising,poor_met.periodicDose.pulse.count,poor_met.periodicDose.pulse.T_start,poor_met.periodicDose.absorptionLumen.rising,poor_met.central.rising,$whenCondition10,$whenCondition9,$whenCondition8,$whenCondition7,$whenCondition6,$PRE.rapid_met.periodicDose.pulse.count,$PRE.rapid_met.periodicDose.pulse.T_start,$PRE.rapid_met.periodicDose.absorptionLumen.rising,$PRE.rapid_met.central.rising,rapid_met.periodicDose.pulse.count,rapid_met.periodicDose.pulse.T_start,rapid_met.periodicDose.absorptionLumen.rising,rapid_met.central.rising,$whenCondition5,$whenCondition4,$whenCondition3,$whenCondition2,$whenCondition1) * Number of discrete states: 0 () * Number of clocked states: 0 () * Top-level inputs: 0 Notification: Strong component statistics for initialization (150): * Single equations (assignments): 141 * Array equations: 0 * Algorithm blocks: 9 * Record equations: 0 * When equations: 0 * If-equations: 0 * Equation systems (not torn): 0 * Torn equation systems: 0 * Mixed (continuous/discrete) equation systems: 0 Notification: Performance of prepare postOptimizeDAE: time 0.0007348/0.5796, allocations: 0.5699 MB / 1.01 GB, free: 9.594 MB / 0.698 GB Notification: Performance of postOpt lateInlineFunction (simulation): time 0.0001247/0.5798, allocations: 91.73 kB / 1.01 GB, free: 9.547 MB / 0.698 GB Notification: Performance of postOpt wrapFunctionCalls (simulation): time 0.0001075/0.5799, allocations: 84.97 kB / 1.01 GB, free: 9.488 MB / 0.698 GB Notification: Performance of postOpt inlineArrayEqn (simulation): time 1.477e-05/0.5799, allocations: 13.95 kB / 1.01 GB, free: 9.484 MB / 0.698 GB Notification: Performance of postOpt constantLinearSystem (simulation): time 1.617e-05/0.5799, allocations: 0.6875 kB / 1.01 GB, free: 9.484 MB / 0.698 GB Notification: Performance of postOpt simplifysemiLinear (simulation): time 1.11e-05/0.5799, allocations: 5.547 kB / 1.01 GB, free: 9.484 MB / 0.698 GB Notification: Performance of postOpt removeSimpleEquations (simulation): time 0.00274/0.5826, allocations: 2.311 MB / 1.012 GB, free: 8.09 MB / 0.698 GB Notification: Performance of postOpt simplifyComplexFunction (simulation): time 3.647e-06/0.5826, allocations: 3.609 kB / 1.012 GB, free: 8.09 MB / 0.698 GB Notification: Performance of postOpt solveSimpleEquations (simulation): time 0.0004764/0.5831, allocations: 172.2 kB / 1.012 GB, free: 8.082 MB / 0.698 GB Notification: Performance of postOpt tearingSystem (simulation): time 6.552e-06/0.5831, allocations: 3.031 kB / 1.012 GB, free: 8.082 MB / 0.698 GB Notification: Performance of postOpt inputDerivativesUsed (simulation): time 5.728e-05/0.5832, allocations: 36.95 kB / 1.012 GB, free: 8.066 MB / 0.698 GB Notification: Performance of postOpt calculateStrongComponentJacobians (simulation): time 6.743e-06/0.5832, allocations: 7.547 kB / 1.012 GB, free: 8.066 MB / 0.698 GB Notification: Performance of postOpt calculateStateSetsJacobians (simulation): time 2.705e-06/0.5832, allocations: 1.219 kB / 1.012 GB, free: 8.066 MB / 0.698 GB Notification: Performance of postOpt symbolicJacobian (simulation): time 0.002563/0.5858, allocations: 2.249 MB / 1.015 GB, free: 6.629 MB / 0.698 GB Notification: Performance of postOpt removeConstants (simulation): time 0.0003588/0.5861, allocations: 172 kB / 1.015 GB, free: 6.523 MB / 0.698 GB Notification: Performance of postOpt simplifyTimeIndepFuncCalls (simulation): time 0.0001345/0.5863, allocations: 41.78 kB / 1.015 GB, free: 6.504 MB / 0.698 GB Notification: Performance of postOpt simplifyAllExpressions (simulation): time 0.000326/0.5866, allocations: 51.5 kB / 1.015 GB, free: 6.492 MB / 0.698 GB Notification: Performance of postOpt findZeroCrossings (simulation): time 0.0002097/0.5868, allocations: 103.2 kB / 1.015 GB, free: 6.465 MB / 0.698 GB Notification: Performance of postOpt collapseArrayExpressions (simulation): time 6.121e-05/0.5869, allocations: 40.8 kB / 1.015 GB, free: 6.453 MB / 0.698 GB Notification: Performance of sorting global known variables: time 0.0004413/0.5873, allocations: 365.9 kB / 1.015 GB, free: 6.281 MB / 0.698 GB Notification: Performance of sort global known variables: time 1.71e-07/0.5873, allocations: 0.5312 kB / 1.015 GB, free: 6.281 MB / 0.698 GB Notification: Performance of remove unused functions: time 0.0008119/0.5881, allocations: 246 kB / 1.016 GB, free: 6.254 MB / 0.698 GB Notification: Model statistics after passing the back-end for simulation: * Number of independent subsystems: 3 * Number of states: 21 (rapid_met.central.C,rapid_met.central.AUC,rapid_met.elim.MExc,rapid_met.periodicDose.TotalCumulativeMass,rapid_met.periodicDose.absorptionLumen.C,rapid_met.periodicDose.absorptionLumen.AUC,rapid_met.periodicDose.variableDose.TotalCumulativeMass,poor_met.central.C,poor_met.central.AUC,poor_met.elim.MExc,poor_met.periodicDose.TotalCumulativeMass,poor_met.periodicDose.absorptionLumen.C,poor_met.periodicDose.absorptionLumen.AUC,poor_met.periodicDose.variableDose.TotalCumulativeMass,normal.central.C,normal.central.AUC,normal.elim.MExc,normal.periodicDose.TotalCumulativeMass,normal.periodicDose.absorptionLumen.C,normal.periodicDose.absorptionLumen.AUC,normal.periodicDose.variableDose.TotalCumulativeMass) * Number of discrete variables: 39 ($whenCondition1,$whenCondition2,$whenCondition3,$whenCondition4,$whenCondition5,rapid_met.central.Cmax,rapid_met.central.Cmin,rapid_met.central.rising,rapid_met.periodicDose.absorptionLumen.Cmax,rapid_met.periodicDose.absorptionLumen.Cmin,rapid_met.periodicDose.absorptionLumen.rising,rapid_met.periodicDose.pulse.T_start,rapid_met.periodicDose.pulse.count,$whenCondition6,$whenCondition7,$whenCondition8,$whenCondition9,$whenCondition10,poor_met.central.Cmax,poor_met.central.Cmin,poor_met.central.rising,poor_met.periodicDose.absorptionLumen.Cmax,poor_met.periodicDose.absorptionLumen.Cmin,poor_met.periodicDose.absorptionLumen.rising,poor_met.periodicDose.pulse.T_start,poor_met.periodicDose.pulse.count,$whenCondition11,$whenCondition12,$whenCondition13,$whenCondition14,$whenCondition15,normal.central.Cmax,normal.central.Cmin,normal.central.rising,normal.periodicDose.absorptionLumen.Cmax,normal.periodicDose.absorptionLumen.Cmin,normal.periodicDose.absorptionLumen.rising,normal.periodicDose.pulse.T_start,normal.periodicDose.pulse.count) * Number of discrete states: 33 (normal.periodicDose.pulse.count,normal.central.Cmin,$whenCondition15,normal.central.Cmax,$whenCondition14,normal.central.rising,normal.periodicDose.absorptionLumen.Cmin,$whenCondition13,normal.periodicDose.absorptionLumen.Cmax,$whenCondition12,normal.periodicDose.absorptionLumen.rising,poor_met.periodicDose.pulse.count,poor_met.central.Cmin,$whenCondition10,poor_met.central.Cmax,$whenCondition9,poor_met.central.rising,poor_met.periodicDose.absorptionLumen.Cmin,$whenCondition8,poor_met.periodicDose.absorptionLumen.Cmax,$whenCondition7,poor_met.periodicDose.absorptionLumen.rising,rapid_met.periodicDose.pulse.count,rapid_met.central.Cmin,$whenCondition5,rapid_met.central.Cmax,$whenCondition4,rapid_met.central.rising,rapid_met.periodicDose.absorptionLumen.Cmin,$whenCondition3,rapid_met.periodicDose.absorptionLumen.Cmax,$whenCondition2,rapid_met.periodicDose.absorptionLumen.rising) * Number of clocked states: 0 () * Top-level inputs: 0 Notification: Strong component statistics for simulation (87): * Single equations (assignments): 75 * Array equations: 0 * Algorithm blocks: 6 * Record equations: 0 * When equations: 6 * If-equations: 0 * Equation systems (not torn): 0 * Torn equation systems: 0 * Mixed (continuous/discrete) equation systems: 0 Notification: Performance of Backend phase and start with SimCode phase: time 0.0001968/0.5883, allocations: 187.4 kB / 1.016 GB, free: 6.133 MB / 0.698 GB Notification: Performance of simCode: created initialization part: time 0.001918/0.5902, allocations: 1.834 MB / 1.017 GB, free: 4.777 MB / 0.698 GB Notification: Performance of simCode: created event and clocks part: time 3.016e-06/0.5902, allocations: 4.062 kB / 1.017 GB, free: 4.773 MB / 0.698 GB Notification: Performance of simCode: created simulation system equations: time 0.0008316/0.5911, allocations: 0.9434 MB / 1.018 GB, free: 4.051 MB / 0.698 GB Notification: Performance of simCode: created of all other equations (e.g. parameter, nominal, assert, etc): time 0.0009304/0.592, allocations: 260.5 kB / 1.019 GB, free: 3.965 MB / 0.698 GB Notification: Performance of simCode: created linear, non-linear and system jacobian parts: time 0.003552/0.5955, allocations: 2.818 MB / 1.021 GB, free: 2 MB / 0.698 GB Notification: Performance of simCode: some other stuff during SimCode phase: time 0.000387/0.5959, allocations: 367.6 kB / 1.022 GB, free: 1.883 MB / 0.698 GB Notification: Performance of simCode: all other stuff during SimCode phase: time 0.0002512/0.5962, allocations: 70.91 kB / 1.022 GB, free: 1.871 MB / 0.698 GB Notification: Performance of SimCode: time 1.092e-06/0.5962, allocations: 0.5 kB / 1.022 GB, free: 1.871 MB / 0.698 GB Notification: Performance of Templates: time 0.01758/0.6138, allocations: 12.16 MB / 1.034 GB, free: 13.98 MB / 0.7137 GB " [Timeout remaining time 659] make -j1 -f Pharmacolibrary_Pharmacolibrary.Examples.Paracetamol_Experiment.makefile [Timeout 660] (rm -f Pharmacolibrary_Pharmacolibrary.Examples.Paracetamol_Experiment.pipe ; mkfifo Pharmacolibrary_Pharmacolibrary.Examples.Paracetamol_Experiment.pipe ; head -c 1048576 < Pharmacolibrary_Pharmacolibrary.Examples.Paracetamol_Experiment.pipe >> ../files/Pharmacolibrary_Pharmacolibrary.Examples.Paracetamol_Experiment.sim & ./Pharmacolibrary_Pharmacolibrary.Examples.Paracetamol_Experiment > Pharmacolibrary_Pharmacolibrary.Examples.Paracetamol_Experiment.pipe 2>&1) [Timeout 240] [Calling sys.exit(0), Time elapsed: 8.266752114985138]