Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr Pharmacolibrary_Pharmacolibrary.Examples.PKPG_1C_Gentamicin.conf.json loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo): time 0.001331/0.001331, allocations: 104.3 kB / 19.71 MB, free: 436 kB / 13.93 MB " [Timeout remaining time 180] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo): time 0.001011/0.001011, allocations: 216.9 kB / 23 MB, free: 2.973 MB / 13.93 MB " [Timeout remaining time 180] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo): time 0.9522/0.9522, allocations: 230.6 MB / 256.8 MB, free: 9.609 MB / 202.7 MB " [Timeout remaining time 179] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/package.mo", uses=false) [Timeout 180] "[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/Examples/package.order:0:0-0:0:readonly] Warning: The package.order file does not list all .mo files and directories (containing package.mo) present in its directory. Missing names are: Paracetamol_Experiment Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/package.mo): time 1.658/1.658, allocations: 334.2 MB / 0.6323 GB, free: 7.902 MB / 442.7 MB " [Timeout remaining time 178] Using package Pharmacolibrary with version 25.09 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/package.mo) Using package Modelica with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo) Using package Complex with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo) Using package ModelicaServices with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo) Running command: translateModel(Pharmacolibrary.Examples.PKPG_1C_Gentamicin,tolerance=1e-06,outputFormat="empty",numberOfIntervals=86400,variableFilter="",fileNamePrefix="Pharmacolibrary_Pharmacolibrary.Examples.PKPG_1C_Gentamicin") translateModel(Pharmacolibrary.Examples.PKPG_1C_Gentamicin,tolerance=1e-06,outputFormat="empty",numberOfIntervals=86400,variableFilter="",fileNamePrefix="Pharmacolibrary_Pharmacolibrary.Examples.PKPG_1C_Gentamicin") [Timeout 660] "Notification: Pharmacolibrary requested package Modelica of version 4.0.0. Modelica 4.1.0 is used instead which states that it is fully compatible without conversion script needed. Notification: Performance of FrontEnd - loaded program: time 0.001678/0.001678, allocations: 71.84 kB / 0.867 GB, free: 8.074 MB / 0.573 GB Notification: Performance of FrontEnd - Absyn->SCode: time 0.1764/0.178, allocations: 112.8 MB / 0.9772 GB, free: 6.988 MB / 0.6824 GB Notification: Performance of NFInst.instantiate(Pharmacolibrary.Examples.PKPG_1C_Gentamicin): time 0.002595/0.1806, allocations: 2.351 MB / 0.9795 GB, free: 4.625 MB / 0.6824 GB Notification: Performance of NFInst.instExpressions: time 0.00112/0.1818, allocations: 0.8993 MB / 0.9804 GB, free: 3.723 MB / 0.6824 GB Notification: Performance of NFInst.updateImplicitVariability: time 9.067e-05/0.1819, allocations: 4 kB / 0.9804 GB, free: 3.719 MB / 0.6824 GB Notification: Performance of NFTyping.typeComponents: time 0.0003545/0.1822, allocations: 115.4 kB / 0.9805 GB, free: 3.605 MB / 0.6824 GB Notification: Performance of NFTyping.typeBindings: time 0.0001129/0.1823, allocations: 79.33 kB / 0.9806 GB, free: 3.527 MB / 0.6824 GB Notification: Performance of NFTyping.typeClassSections: time 0.0003224/0.1826, allocations: 139.7 kB / 0.9807 GB, free: 3.391 MB / 0.6824 GB Notification: Performance of NFFlatten.flatten: time 0.0002465/0.1829, allocations: 278.8 kB / 0.981 GB, free: 3.117 MB / 0.6824 GB Notification: Performance of NFFlatten.resolveConnections: time 0.0001245/0.183, allocations: 41.09 kB / 0.981 GB, free: 3.07 MB / 0.6824 GB Notification: Performance of NFEvalConstants.evaluate: time 0.0001072/0.1831, allocations: 107.6 kB / 0.9811 GB, free: 2.965 MB / 0.6824 GB Notification: Performance of NFSimplifyModel.simplify: time 0.0001343/0.1833, allocations: 107.4 kB / 0.9812 GB, free: 2.859 MB / 0.6824 GB Notification: Performance of NFPackage.collectConstants: time 2.625e-05/0.1833, allocations: 20 kB / 0.9812 GB, free: 2.84 MB / 0.6824 GB Notification: Performance of NFFlatten.collectFunctions: time 0.0001852/0.1835, allocations: 167.4 kB / 0.9814 GB, free: 2.676 MB / 0.6824 GB Notification: Performance of NFScalarize.scalarize: time 6.919e-05/0.1835, allocations: 59.77 kB / 0.9814 GB, free: 2.617 MB / 0.6824 GB Notification: Performance of NFVerifyModel.verify: time 8.483e-05/0.1836, allocations: 107.4 kB / 0.9816 GB, free: 2.512 MB / 0.6824 GB Notification: Performance of NFConvertDAE.convert: time 0.0003486/0.184, allocations: 406.4 kB / 0.9819 GB, free: 2.113 MB / 0.6824 GB Notification: Performance of FrontEnd - DAE generated: time 4.578e-06/0.184, allocations: 0 / 0.9819 GB, free: 2.113 MB / 0.6824 GB Notification: Performance of FrontEnd: time 1.563e-06/0.184, allocations: 0 / 0.9819 GB, free: 2.113 MB / 0.6824 GB Notification: Performance of Transformations before backend: time 7.024e-06/0.184, allocations: 0 / 0.9819 GB, free: 2.113 MB / 0.6824 GB Notification: Model statistics after passing the front-end and creating the data structures used by the back-end: * Number of equations: 40 * Number of variables: 40 Notification: Performance of Generate backend data structure: time 0.000732/0.1847, allocations: 0.6016 MB / 0.9825 GB, free: 1.457 MB / 0.6824 GB Notification: Performance of prepare preOptimizeDAE: time 3.655e-05/0.1848, allocations: 10.11 kB / 0.9825 GB, free: 1.449 MB / 0.6824 GB Notification: Performance of preOpt normalInlineFunction (simulation): time 0.0001605/0.1849, allocations: 52.72 kB / 0.9826 GB, free: 1.398 MB / 0.6824 GB Notification: Performance of preOpt evaluateParameters (simulation): time 0.0002814/0.1852, allocations: 237 kB / 0.9828 GB, free: 1.141 MB / 0.6824 GB Notification: Performance of preOpt simplifyIfEquations (simulation): time 1.275e-05/0.1852, allocations: 12.38 kB / 0.9828 GB, free: 1.129 MB / 0.6824 GB Notification: Performance of preOpt expandDerOperator (simulation): time 3.606e-05/0.1852, allocations: 19.94 kB / 0.9828 GB, free: 1.109 MB / 0.6824 GB Notification: Performance of preOpt clockPartitioning (simulation): time 0.0003505/0.1856, allocations: 371.5 kB / 0.9832 GB, free: 0.7227 MB / 0.6824 GB Notification: Performance of preOpt findStateOrder (simulation): time 1.476e-05/0.1856, allocations: 11.89 kB / 0.9832 GB, free: 0.7109 MB / 0.6824 GB Notification: Performance of preOpt replaceEdgeChange (simulation): time 1.57e-05/0.1856, allocations: 11.94 kB / 0.9832 GB, free: 0.6992 MB / 0.6824 GB Notification: Performance of preOpt inlineArrayEqn (simulation): time 6.603e-06/0.1856, allocations: 4 kB / 0.9832 GB, free: 0.6953 MB / 0.6824 GB Notification: Performance of preOpt removeEqualRHS (simulation): time 0.000294/0.1859, allocations: 328.9 kB / 0.9835 GB, free: 364 kB / 0.6824 GB Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.0006042/0.1865, allocations: 468.7 kB / 0.984 GB, free: 15.87 MB / 0.698 GB Notification: Performance of preOpt comSubExp (simulation): time 0.0006036/0.1871, allocations: 359.6 kB / 0.9843 GB, free: 15.49 MB / 0.698 GB Notification: Performance of preOpt resolveLoops (simulation): time 0.0001979/0.1873, allocations: 277.7 kB / 0.9846 GB, free: 15.2 MB / 0.698 GB Notification: Performance of preOpt evalFunc (simulation): time 1.312e-05/0.1873, allocations: 4 kB / 0.9846 GB, free: 15.19 MB / 0.698 GB Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 0.0003229/0.1877, allocations: 411.1 kB / 0.985 GB, free: 14.75 MB / 0.698 GB Notification: Performance of pre-optimization done (n=26): time 2.545e-06/0.1877, allocations: 3.984 kB / 0.985 GB, free: 14.75 MB / 0.698 GB Notification: Performance of matching and sorting (n=27): time 0.001486/0.1892, allocations: 1.636 MB / 0.9866 GB, free: 12.98 MB / 0.698 GB Notification: Performance of inlineWhenForInitialization (initialization): time 6.642e-05/0.1892, allocations: 191.9 kB / 0.9868 GB, free: 12.75 MB / 0.698 GB Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.000186/0.1894, allocations: 261.9 kB / 0.987 GB, free: 12.5 MB / 0.698 GB Notification: Performance of collectPreVariables (initialization): time 2.221e-05/0.1894, allocations: 33.7 kB / 0.9871 GB, free: 12.46 MB / 0.698 GB Notification: Performance of collectInitialEqns (initialization): time 7.584e-05/0.1895, allocations: 148.6 kB / 0.9872 GB, free: 12.31 MB / 0.698 GB Notification: Performance of collectInitialBindings (initialization): time 5.12e-05/0.1896, allocations: 95.25 kB / 0.9873 GB, free: 12.21 MB / 0.698 GB Notification: Performance of simplifyInitialFunctions (initialization): time 6.518e-05/0.1896, allocations: 65.86 kB / 0.9873 GB, free: 12.14 MB / 0.698 GB Notification: Performance of setup shared object (initialization): time 8.001e-05/0.1897, allocations: 338.8 kB / 0.9877 GB, free: 11.8 MB / 0.698 GB Notification: Performance of preBalanceInitialSystem (initialization): time 0.0002275/0.1899, allocations: 316.3 kB / 0.988 GB, free: 11.47 MB / 0.698 GB Notification: Performance of partitionIndependentBlocks (initialization): time 0.0002532/0.1902, allocations: 405.6 kB / 0.9884 GB, free: 11.02 MB / 0.698 GB Notification: Performance of analyzeInitialSystem (initialization): time 0.0009379/0.1911, allocations: 1.248 MB / 0.9896 GB, free: 9.656 MB / 0.698 GB Notification: Performance of solveInitialSystemEqSystem (initialization): time 1.964e-06/0.1911, allocations: 0 / 0.9896 GB, free: 9.656 MB / 0.698 GB Notification: Performance of matching and sorting (n=38) (initialization): time 0.0006089/0.1917, allocations: 0.759 MB / 0.9903 GB, free: 8.848 MB / 0.698 GB Notification: Performance of prepare postOptimizeDAE: time 5.606e-05/0.1918, allocations: 120.5 kB / 0.9904 GB, free: 8.707 MB / 0.698 GB Notification: Performance of postOpt simplifyComplexFunction (initialization): time 5.631e-06/0.1918, allocations: 4 kB / 0.9904 GB, free: 8.703 MB / 0.698 GB Notification: Performance of postOpt tearingSystem (initialization): time 1.489e-05/0.1918, allocations: 7.938 kB / 0.9904 GB, free: 8.695 MB / 0.698 GB Notification: Performance of postOpt solveSimpleEquations (initialization): time 0.0001383/0.1919, allocations: 47.91 kB / 0.9905 GB, free: 8.648 MB / 0.698 GB Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 8.426e-06/0.192, allocations: 4 kB / 0.9905 GB, free: 8.645 MB / 0.698 GB Notification: Performance of postOpt simplifyAllExpressions (initialization): time 9.726e-05/0.192, allocations: 15.98 kB / 0.9905 GB, free: 8.629 MB / 0.698 GB Notification: Performance of postOpt collapseArrayExpressions (initialization): time 6.129e-05/0.1921, allocations: 67.92 kB / 0.9906 GB, free: 8.562 MB / 0.698 GB Warning: Assuming fixed start value for the following 6 variables: singleDose.TotalCumulativeMass:VARIABLE(min = -1e-12 unit = \"kg\" fixed = true ) \"Total dose adminitrated by this source\" type: Real singleDose.variableDose.TotalCumulativeMass:VARIABLE(min = -1e-12 unit = \"kg\" fixed = true ) \"Total dose adminitrated by this source\" type: Real central.AUC:VARIABLE(unit = \"kg.s/m3\" fixed = true ) \"area under curve\" type: Real central.Cmin:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real central.Cmax:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real central.rising:DISCRETE(fixed = true protected = true ) type: Boolean Notification: Model statistics after passing the back-end for initialization: * Number of independent subsystems: 7 * Number of states: 0 () * Number of discrete variables: 15 ($PRE.central.Cmin,central.Cmin,$PRE.central.Cmax,central.Cmax,$PRE.central.rising,$PRE.singleDose.pulse.count,$PRE.singleDose.pulse.T_start,CYP2C19.status,SLC22A2.status,central.rising,singleDose.pulse.count,singleDose.pulse.T_start,$whenCondition3,$whenCondition2,$whenCondition1) * Number of discrete states: 0 () * Number of clocked states: 0 () * Top-level inputs: 0 Notification: Strong component statistics for initialization (34): * Single equations (assignments): 30 * Array equations: 0 * Algorithm blocks: 4 * Record equations: 0 * When equations: 0 * If-equations: 0 * Equation systems (not torn): 0 * Torn equation systems: 0 * Mixed (continuous/discrete) equation systems: 0 Notification: Performance of prepare postOptimizeDAE: time 0.0002024/0.1923, allocations: 264.5 kB / 0.9908 GB, free: 8.277 MB / 0.698 GB Notification: Performance of postOpt lateInlineFunction (simulation): time 0.0003155/0.1926, allocations: 35.8 kB / 0.9909 GB, free: 8.242 MB / 0.698 GB Notification: Performance of postOpt wrapFunctionCalls (simulation): time 3.5e-05/0.1927, allocations: 30.95 kB / 0.9909 GB, free: 8.215 MB / 0.698 GB Notification: Performance of postOpt inlineArrayEqn (simulation): time 3.046e-06/0.1927, allocations: 4 kB / 0.9909 GB, free: 8.211 MB / 0.698 GB Notification: Performance of postOpt constantLinearSystem (simulation): time 4.899e-06/0.1927, allocations: 0 / 0.9909 GB, free: 8.211 MB / 0.698 GB Notification: Performance of postOpt simplifysemiLinear (simulation): time 4.439e-06/0.1927, allocations: 0 / 0.9909 GB, free: 8.211 MB / 0.698 GB Notification: Performance of postOpt removeSimpleEquations (simulation): time 0.0007646/0.1934, allocations: 0.9691 MB / 0.9918 GB, free: 7.168 MB / 0.698 GB Notification: Performance of postOpt simplifyComplexFunction (simulation): time 1.653e-06/0.1934, allocations: 0 / 0.9918 GB, free: 7.168 MB / 0.698 GB Notification: Performance of postOpt solveSimpleEquations (simulation): time 0.0001201/0.1936, allocations: 43.91 kB / 0.9919 GB, free: 7.125 MB / 0.698 GB Notification: Performance of postOpt tearingSystem (simulation): time 3.236e-06/0.1936, allocations: 4 kB / 0.9919 GB, free: 7.121 MB / 0.698 GB Notification: Performance of postOpt inputDerivativesUsed (simulation): time 1.639e-05/0.1936, allocations: 8 kB / 0.9919 GB, free: 7.113 MB / 0.698 GB Notification: Performance of postOpt calculateStrongComponentJacobians (simulation): time 3.406e-06/0.1936, allocations: 3.984 kB / 0.9919 GB, free: 7.109 MB / 0.698 GB Notification: Performance of postOpt calculateStateSetsJacobians (simulation): time 2.104e-06/0.1936, allocations: 4 kB / 0.9919 GB, free: 7.105 MB / 0.698 GB Notification: Performance of postOpt symbolicJacobian (simulation): time 0.3313/0.5249, allocations: 1.115 MB / 0.993 GB, free: 26.52 MB / 0.698 GB Notification: Performance of postOpt removeConstants (simulation): time 3.885e-05/0.5249, allocations: 18.3 kB / 0.993 GB, free: 26.52 MB / 0.698 GB Notification: Performance of postOpt simplifyTimeIndepFuncCalls (simulation): time 3.815e-05/0.525, allocations: 14.5 kB / 0.993 GB, free: 26.52 MB / 0.698 GB Notification: Performance of postOpt simplifyAllExpressions (simulation): time 0.0001078/0.5251, allocations: 14.53 kB / 0.993 GB, free: 26.52 MB / 0.698 GB Notification: Performance of postOpt findZeroCrossings (simulation): time 7.901e-05/0.5251, allocations: 22.47 kB / 0.9931 GB, free: 26.52 MB / 0.698 GB Notification: Performance of postOpt collapseArrayExpressions (simulation): time 5.603e-05/0.5252, allocations: 54.12 kB / 0.9931 GB, free: 26.52 MB / 0.698 GB Notification: Performance of sorting global known variables: time 0.0001344/0.5253, allocations: 192.3 kB / 0.9933 GB, free: 26.45 MB / 0.698 GB Notification: Performance of sort global known variables: time 8e-08/0.5253, allocations: 0 / 0.9933 GB, free: 26.45 MB / 0.698 GB Notification: Performance of remove unused functions: time 0.0003063/0.5256, allocations: 73.53 kB / 0.9934 GB, free: 26.45 MB / 0.698 GB Notification: Model statistics after passing the back-end for simulation: * Number of independent subsystems: 1 * Number of states: 5 (singleDose.TotalCumulativeMass,singleDose.variableDose.TotalCumulativeMass,central.C,central.AUC,elim.MExc) * Number of discrete variables: 10 ($whenCondition1,$whenCondition2,$whenCondition3,singleDose.pulse.T_start,singleDose.pulse.count,central.Cmax,central.Cmin,central.rising,SLC22A2.status,CYP2C19.status) * Number of discrete states: 8 (singleDose.pulse.count,SLC22A2.status,CYP2C19.status,central.Cmin,$whenCondition3,central.Cmax,$whenCondition2,central.rising) * Number of clocked states: 0 () * Top-level inputs: 0 Notification: Strong component statistics for simulation (22): * Single equations (assignments): 17 * Array equations: 0 * Algorithm blocks: 3 * Record equations: 0 * When equations: 2 * If-equations: 0 * Equation systems (not torn): 0 * Torn equation systems: 0 * Mixed (continuous/discrete) equation systems: 0 Notification: Performance of Backend phase and start with SimCode phase: time 0.0002056/0.5258, allocations: 155.3 kB / 0.9935 GB, free: 26.36 MB / 0.698 GB Notification: Performance of simCode: created initialization part: time 0.0005432/0.5264, allocations: 0.8536 MB / 0.9943 GB, free: 25.88 MB / 0.698 GB Notification: Performance of simCode: created event and clocks part: time 2.304e-06/0.5264, allocations: 3.375 kB / 0.9944 GB, free: 25.88 MB / 0.698 GB Notification: Performance of simCode: created simulation system equations: time 0.0002249/0.5266, allocations: 472.8 kB / 0.9948 GB, free: 25.6 MB / 0.698 GB Notification: Performance of simCode: created of all other equations (e.g. parameter, nominal, assert, etc): time 0.0003118/0.5269, allocations: 69.08 kB / 0.9949 GB, free: 25.6 MB / 0.698 GB Notification: Performance of simCode: created linear, non-linear and system jacobian parts: time 0.001021/0.5279, allocations: 1.076 MB / 0.9959 GB, free: 25.07 MB / 0.698 GB Notification: Performance of simCode: some other stuff during SimCode phase: time 0.0001007/0.528, allocations: 167 kB / 0.9961 GB, free: 25 MB / 0.698 GB Notification: Performance of simCode: all other stuff during SimCode phase: time 4.042e-05/0.5281, allocations: 24.5 kB / 0.9961 GB, free: 24.98 MB / 0.698 GB Notification: Performance of SimCode: time 5.11e-07/0.5281, allocations: 0 / 0.9961 GB, free: 24.98 MB / 0.698 GB Notification: Performance of Templates: time 0.004736/0.5328, allocations: 3.867 MB / 0.9999 GB, free: 24.64 MB / 0.698 GB " [Timeout remaining time 659] make -j1 -f Pharmacolibrary_Pharmacolibrary.Examples.PKPG_1C_Gentamicin.makefile [Timeout 660] make -j1 -f Pharmacolibrary_Pharmacolibrary.Examples.PKPG_1C_Gentamicin.makefile clang++ -std=c++17 -fopenmp=libomp -Winvalid-pch -O2 -g -DNDEBUG -fPIC -std=c++11 -DBOOST_ALL_DYN_LINK -DOMC_BUILD -DUSE_THREAD -I"." -I"/var/lib/jenkins/ws/OpenModelicaLibraryTestingWork/OpenModelica/OMCompiler/build/bin/../include/omc/cpp/" -I. -I"." -I"." -I"/var/lib/jenkins/ws/OpenModelicaLibraryTestingWork/OpenModelica/OMCompiler/build/include/omc/sundials" -DMEASURETIME_PROFILEBLOCKS -DUSE_LOGGER -c -o OMCppPharmacolibrary_Pharmacolibrary.Examples.PKPG_1C_GentamicinCalcHelperMain.o OMCppPharmacolibrary_Pharmacolibrary.Examples.PKPG_1C_GentamicinCalcHelperMain.cpp In file included from OMCppPharmacolibrary_Pharmacolibrary.Examples.PKPG_1C_GentamicinCalcHelperMain.cpp:29: ./OMCppPharmacolibrary_Pharmacolibrary.Examples.PKPG_1C_GentamicinInitialize.cpp:180:105: error: use of undeclared identifier 'CYP2C19_P_g_P_ph_P_intermediate_'; did you mean '_SLC22A2_P_g_P_ph_P_intermediate_'? 180 | _functions->Pharmacolibrary_Pharmacogenomics_Phenotypes_CYP2C19__Phenotype(_CYP2C19_P_g_P_ph_P_poor_, CYP2C19_P_g_P_ph_P_intermediate_, _CYP2C19_P_g_P_ph_P_rapid_, CYP2C19_P_g_P_ph_P_ultra_, _CYP2C19_P_g_P_ph_P_CLscale_, _CYP2C19_P_g_P_ph_P_Fscale_,tmp1); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | _SLC22A2_P_g_P_ph_P_intermediate_ ./OMCppPharmacolibrary_Pharmacolibrary.Examples.PKPG_1C_Gentamicin.h:239:36: note: '_SLC22A2_P_g_P_ph_P_intermediate_' declared here 239 | StatArrayDim1 _SLC22A2_P_g_P_ph_P_intermediate_; | ^ In file included from OMCppPharmacolibrary_Pharmacolibrary.Examples.PKPG_1C_GentamicinCalcHelperMain.cpp:29: ./OMCppPharmacolibrary_Pharmacolibrary.Examples.PKPG_1C_GentamicinInitialize.cpp:180:167: error: use of undeclared identifier 'CYP2C19_P_g_P_ph_P_ultra_'; did you mean '_CYP2C19_P_g_P_ph_P_poor_'? 180 | _functions->Pharmacolibrary_Pharmacogenomics_Phenotypes_CYP2C19__Phenotype(_CYP2C19_P_g_P_ph_P_poor_, CYP2C19_P_g_P_ph_P_intermediate_, _CYP2C19_P_g_P_ph_P_rapid_, CYP2C19_P_g_P_ph_P_ultra_, _CYP2C19_P_g_P_ph_P_CLscale_, _CYP2C19_P_g_P_ph_P_Fscale_,tmp1); | ^~~~~~~~~~~~~~~~~~~~~~~~~ | _CYP2C19_P_g_P_ph_P_poor_ ./OMCppPharmacolibrary_Pharmacolibrary.Examples.PKPG_1C_Gentamicin.h:236:36: note: '_CYP2C19_P_g_P_ph_P_poor_' declared here 236 | StatArrayDim1 _CYP2C19_P_g_P_ph_P_poor_; | ^ In file included from OMCppPharmacolibrary_Pharmacolibrary.Examples.PKPG_1C_GentamicinCalcHelperMain.cpp:29: ./OMCppPharmacolibrary_Pharmacolibrary.Examples.PKPG_1C_GentamicinInitialize.cpp:184:105: error: use of undeclared identifier 'CYP2C19_P_g_P_ph_P_intermediate_'; did you mean '_SLC22A2_P_g_P_ph_P_intermediate_'? 184 | _functions->Pharmacolibrary_Pharmacogenomics_Phenotypes_CYP2C19__Phenotype(_CYP2C19_P_g_P_ph_P_poor_, CYP2C19_P_g_P_ph_P_intermediate_, _CYP2C19_P_g_P_ph_P_rapid_, CYP2C19_P_g_P_ph_P_ultra_, _CYP2C19_P_g_P_ph_P_CLscale_, _CYP2C19_P_g_P_ph_P_Fscale_,tmp3); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | _SLC22A2_P_g_P_ph_P_intermediate_ ./OMCppPharmacolibrary_Pharmacolibrary.Examples.PKPG_1C_Gentamicin.h:239:36: note: '_SLC22A2_P_g_P_ph_P_intermediate_' declared here 239 | StatArrayDim1 _SLC22A2_P_g_P_ph_P_intermediate_; | ^ In file included from OMCppPharmacolibrary_Pharmacolibrary.Examples.PKPG_1C_GentamicinCalcHelperMain.cpp:29: ./OMCppPharmacolibrary_Pharmacolibrary.Examples.PKPG_1C_GentamicinInitialize.cpp:184:167: error: use of undeclared identifier 'CYP2C19_P_g_P_ph_P_ultra_'; did you mean '_CYP2C19_P_g_P_ph_P_poor_'? 184 | _functions->Pharmacolibrary_Pharmacogenomics_Phenotypes_CYP2C19__Phenotype(_CYP2C19_P_g_P_ph_P_poor_, CYP2C19_P_g_P_ph_P_intermediate_, _CYP2C19_P_g_P_ph_P_rapid_, CYP2C19_P_g_P_ph_P_ultra_, _CYP2C19_P_g_P_ph_P_CLscale_, _CYP2C19_P_g_P_ph_P_Fscale_,tmp3); | ^~~~~~~~~~~~~~~~~~~~~~~~~ | _CYP2C19_P_g_P_ph_P_poor_ ./OMCppPharmacolibrary_Pharmacolibrary.Examples.PKPG_1C_Gentamicin.h:236:36: note: '_CYP2C19_P_g_P_ph_P_poor_' declared here 236 | StatArrayDim1 _CYP2C19_P_g_P_ph_P_poor_; | ^ In file included from OMCppPharmacolibrary_Pharmacolibrary.Examples.PKPG_1C_GentamicinCalcHelperMain.cpp:29: ./OMCppPharmacolibrary_Pharmacolibrary.Examples.PKPG_1C_GentamicinInitialize.cpp:218:75: error: use of undeclared identifier 'SLC22A2_P_g_P_ph_P_poor_' 218 | _functions->Pharmacolibrary_Pharmacogenomics_Phenotypes_OCT2__Phenotype(SLC22A2_P_g_P_ph_P_poor_, _SLC22A2_P_g_P_ph_P_intermediate_, SLC22A2_P_g_P_ph_P_rapid_, SLC22A2_P_g_P_ph_P_ultra_, _SLC22A2_P_g_P_ph_P_CLscale_, _SLC22A2_P_g_P_ph_P_Fscale_,tmp5); | ^~~~~~~~~~~~~~~~~~~~~~~~ ./OMCppPharmacolibrary_Pharmacolibrary.Examples.PKPG_1C_GentamicinInitialize.cpp:218:136: error: use of undeclared identifier 'SLC22A2_P_g_P_ph_P_rapid_' 218 | _functions->Pharmacolibrary_Pharmacogenomics_Phenotypes_OCT2__Phenotype(SLC22A2_P_g_P_ph_P_poor_, _SLC22A2_P_g_P_ph_P_intermediate_, SLC22A2_P_g_P_ph_P_rapid_, SLC22A2_P_g_P_ph_P_ultra_, _SLC22A2_P_g_P_ph_P_CLscale_, _SLC22A2_P_g_P_ph_P_Fscale_,tmp5); | ^~~~~~~~~~~~~~~~~~~~~~~~~ ./OMCppPharmacolibrary_Pharmacolibrary.Examples.PKPG_1C_GentamicinInitialize.cpp:218:163: error: use of undeclared identifier 'SLC22A2_P_g_P_ph_P_ultra_' 218 | _functions->Pharmacolibrary_Pharmacogenomics_Phenotypes_OCT2__Phenotype(SLC22A2_P_g_P_ph_P_poor_, _SLC22A2_P_g_P_ph_P_intermediate_, SLC22A2_P_g_P_ph_P_rapid_, SLC22A2_P_g_P_ph_P_ultra_, _SLC22A2_P_g_P_ph_P_CLscale_, _SLC22A2_P_g_P_ph_P_Fscale_,tmp5); | ^~~~~~~~~~~~~~~~~~~~~~~~~ ./OMCppPharmacolibrary_Pharmacolibrary.Examples.PKPG_1C_GentamicinInitialize.cpp:222:75: error: use of undeclared identifier 'SLC22A2_P_g_P_ph_P_poor_' 222 | _functions->Pharmacolibrary_Pharmacogenomics_Phenotypes_OCT2__Phenotype(SLC22A2_P_g_P_ph_P_poor_, _SLC22A2_P_g_P_ph_P_intermediate_, SLC22A2_P_g_P_ph_P_rapid_, SLC22A2_P_g_P_ph_P_ultra_, _SLC22A2_P_g_P_ph_P_CLscale_, _SLC22A2_P_g_P_ph_P_Fscale_,tmp7); | ^~~~~~~~~~~~~~~~~~~~~~~~ ./OMCppPharmacolibrary_Pharmacolibrary.Examples.PKPG_1C_GentamicinInitialize.cpp:222:136: error: use of undeclared identifier 'SLC22A2_P_g_P_ph_P_rapid_' 222 | _functions->Pharmacolibrary_Pharmacogenomics_Phenotypes_OCT2__Phenotype(SLC22A2_P_g_P_ph_P_poor_, _SLC22A2_P_g_P_ph_P_intermediate_, SLC22A2_P_g_P_ph_P_rapid_, SLC22A2_P_g_P_ph_P_ultra_, _SLC22A2_P_g_P_ph_P_CLscale_, _SLC22A2_P_g_P_ph_P_Fscale_,tmp7); | ^~~~~~~~~~~~~~~~~~~~~~~~~ ./OMCppPharmacolibrary_Pharmacolibrary.Examples.PKPG_1C_GentamicinInitialize.cpp:222:163: error: use of undeclared identifier 'SLC22A2_P_g_P_ph_P_ultra_' 222 | _functions->Pharmacolibrary_Pharmacogenomics_Phenotypes_OCT2__Phenotype(SLC22A2_P_g_P_ph_P_poor_, _SLC22A2_P_g_P_ph_P_intermediate_, SLC22A2_P_g_P_ph_P_rapid_, SLC22A2_P_g_P_ph_P_ultra_, _SLC22A2_P_g_P_ph_P_CLscale_, _SLC22A2_P_g_P_ph_P_Fscale_,tmp7); | ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from OMCppPharmacolibrary_Pharmacolibrary.Examples.PKPG_1C_GentamicinCalcHelperMain.cpp:33: ./OMCppPharmacolibrary_Pharmacolibrary.Examples.PKPG_1C_Gentamicin.cpp:177:105: error: use of undeclared identifier 'CYP2C19_P_g_P_ph_P_intermediate_'; did you mean '_SLC22A2_P_g_P_ph_P_intermediate_'? 177 | _functions->Pharmacolibrary_Pharmacogenomics_Phenotypes_CYP2C19__Phenotype(_CYP2C19_P_g_P_ph_P_poor_, CYP2C19_P_g_P_ph_P_intermediate_, _CYP2C19_P_g_P_ph_P_rapid_, CYP2C19_P_g_P_ph_P_ultra_, _CYP2C19_P_g_P_ph_P_CLscale_, _CYP2C19_P_g_P_ph_P_Fscale_,tmp31); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | _SLC22A2_P_g_P_ph_P_intermediate_ ./OMCppPharmacolibrary_Pharmacolibrary.Examples.PKPG_1C_Gentamicin.h:239:36: note: '_SLC22A2_P_g_P_ph_P_intermediate_' declared here 239 | StatArrayDim1 _SLC22A2_P_g_P_ph_P_intermediate_; | ^ In file included from OMCppPharmacolibrary_Pharmacolibrary.Examples.PKPG_1C_GentamicinCalcHelperMain.cpp:33: ./OMCppPharmacolibrary_Pharmacolibrary.Examples.PKPG_1C_Gentamicin.cpp:177:167: error: use of undeclared identifier 'CYP2C19_P_g_P_ph_P_ultra_'; did you mean '_CYP2C19_P_g_P_ph_P_poor_'? 177 | _functions->Pharmacolibrary_Pharmacogenomics_Phenotypes_CYP2C19__Phenotype(_CYP2C19_P_g_P_ph_P_poor_, CYP2C19_P_g_P_ph_P_intermediate_, _CYP2C19_P_g_P_ph_P_rapid_, CYP2C19_P_g_P_ph_P_ultra_, _CYP2C19_P_g_P_ph_P_CLscale_, _CYP2C19_P_g_P_ph_P_Fscale_,tmp31); | ^~~~~~~~~~~~~~~~~~~~~~~~~ | _CYP2C19_P_g_P_ph_P_poor_ ./OMCppPharmacolibrary_Pharmacolibrary.Examples.PKPG_1C_Gentamicin.h:236:36: note: '_CYP2C19_P_g_P_ph_P_poor_' declared here 236 | StatArrayDim1 _CYP2C19_P_g_P_ph_P_poor_; | ^ In file included from OMCppPharmacolibrary_Pharmacolibrary.Examples.PKPG_1C_GentamicinCalcHelperMain.cpp:33: ./OMCppPharmacolibrary_Pharmacolibrary.Examples.PKPG_1C_Gentamicin.cpp:181:105: error: use of undeclared identifier 'CYP2C19_P_g_P_ph_P_intermediate_'; did you mean '_SLC22A2_P_g_P_ph_P_intermediate_'? 181 | _functions->Pharmacolibrary_Pharmacogenomics_Phenotypes_CYP2C19__Phenotype(_CYP2C19_P_g_P_ph_P_poor_, CYP2C19_P_g_P_ph_P_intermediate_, _CYP2C19_P_g_P_ph_P_rapid_, CYP2C19_P_g_P_ph_P_ultra_, _CYP2C19_P_g_P_ph_P_CLscale_, _CYP2C19_P_g_P_ph_P_Fscale_,tmp33); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | _SLC22A2_P_g_P_ph_P_intermediate_ ./OMCppPharmacolibrary_Pharmacolibrary.Examples.PKPG_1C_Gentamicin.h:239:36: note: '_SLC22A2_P_g_P_ph_P_intermediate_' declared here 239 | StatArrayDim1 _SLC22A2_P_g_P_ph_P_intermediate_; | ^ In file included from OMCppPharmacolibrary_Pharmacolibrary.Examples.PKPG_1C_GentamicinCalcHelperMain.cpp:33: ./OMCppPharmacolibrary_Pharmacolibrary.Examples.PKPG_1C_Gentamicin.cpp:181:167: error: use of undeclared identifier 'CYP2C19_P_g_P_ph_P_ultra_'; did you mean '_CYP2C19_P_g_P_ph_P_poor_'? 181 | _functions->Pharmacolibrary_Pharmacogenomics_Phenotypes_CYP2C19__Phenotype(_CYP2C19_P_g_P_ph_P_poor_, CYP2C19_P_g_P_ph_P_intermediate_, _CYP2C19_P_g_P_ph_P_rapid_, CYP2C19_P_g_P_ph_P_ultra_, _CYP2C19_P_g_P_ph_P_CLscale_, _CYP2C19_P_g_P_ph_P_Fscale_,tmp33); | ^~~~~~~~~~~~~~~~~~~~~~~~~ | _CYP2C19_P_g_P_ph_P_poor_ ./OMCppPharmacolibrary_Pharmacolibrary.Examples.PKPG_1C_Gentamicin.h:236:36: note: '_CYP2C19_P_g_P_ph_P_poor_' declared here 236 | StatArrayDim1 _CYP2C19_P_g_P_ph_P_poor_; | ^ In file included from OMCppPharmacolibrary_Pharmacolibrary.Examples.PKPG_1C_GentamicinCalcHelperMain.cpp:33: ./OMCppPharmacolibrary_Pharmacolibrary.Examples.PKPG_1C_Gentamicin.cpp:215:75: error: use of undeclared identifier 'SLC22A2_P_g_P_ph_P_poor_' 215 | _functions->Pharmacolibrary_Pharmacogenomics_Phenotypes_OCT2__Phenotype(SLC22A2_P_g_P_ph_P_poor_, _SLC22A2_P_g_P_ph_P_intermediate_, SLC22A2_P_g_P_ph_P_rapid_, SLC22A2_P_g_P_ph_P_ultra_, _SLC22A2_P_g_P_ph_P_CLscale_, _SLC22A2_P_g_P_ph_P_Fscale_,tmp35); | ^~~~~~~~~~~~~~~~~~~~~~~~ ./OMCppPharmacolibrary_Pharmacolibrary.Examples.PKPG_1C_Gentamicin.cpp:215:136: error: use of undeclared identifier 'SLC22A2_P_g_P_ph_P_rapid_' 215 | _functions->Pharmacolibrary_Pharmacogenomics_Phenotypes_OCT2__Phenotype(SLC22A2_P_g_P_ph_P_poor_, _SLC22A2_P_g_P_ph_P_intermediate_, SLC22A2_P_g_P_ph_P_rapid_, SLC22A2_P_g_P_ph_P_ultra_, _SLC22A2_P_g_P_ph_P_CLscale_, _SLC22A2_P_g_P_ph_P_Fscale_,tmp35); | ^~~~~~~~~~~~~~~~~~~~~~~~~ ./OMCppPharmacolibrary_Pharmacolibrary.Examples.PKPG_1C_Gentamicin.cpp:215:163: error: use of undeclared identifier 'SLC22A2_P_g_P_ph_P_ultra_' 215 | _functions->Pharmacolibrary_Pharmacogenomics_Phenotypes_OCT2__Phenotype(SLC22A2_P_g_P_ph_P_poor_, _SLC22A2_P_g_P_ph_P_intermediate_, SLC22A2_P_g_P_ph_P_rapid_, SLC22A2_P_g_P_ph_P_ultra_, _SLC22A2_P_g_P_ph_P_CLscale_, _SLC22A2_P_g_P_ph_P_Fscale_,tmp35); | ^~~~~~~~~~~~~~~~~~~~~~~~~ ./OMCppPharmacolibrary_Pharmacolibrary.Examples.PKPG_1C_Gentamicin.cpp:219:75: error: use of undeclared identifier 'SLC22A2_P_g_P_ph_P_poor_' 219 | _functions->Pharmacolibrary_Pharmacogenomics_Phenotypes_OCT2__Phenotype(SLC22A2_P_g_P_ph_P_poor_, _SLC22A2_P_g_P_ph_P_intermediate_, SLC22A2_P_g_P_ph_P_rapid_, SLC22A2_P_g_P_ph_P_ultra_, _SLC22A2_P_g_P_ph_P_CLscale_, _SLC22A2_P_g_P_ph_P_Fscale_,tmp37); | ^~~~~~~~~~~~~~~~~~~~~~~~ ./OMCppPharmacolibrary_Pharmacolibrary.Examples.PKPG_1C_Gentamicin.cpp:219:136: error: use of undeclared identifier 'SLC22A2_P_g_P_ph_P_rapid_' 219 | _functions->Pharmacolibrary_Pharmacogenomics_Phenotypes_OCT2__Phenotype(SLC22A2_P_g_P_ph_P_poor_, _SLC22A2_P_g_P_ph_P_intermediate_, SLC22A2_P_g_P_ph_P_rapid_, SLC22A2_P_g_P_ph_P_ultra_, _SLC22A2_P_g_P_ph_P_CLscale_, _SLC22A2_P_g_P_ph_P_Fscale_,tmp37); | ^~~~~~~~~~~~~~~~~~~~~~~~~ fatal error: too many errors emitted, stopping now [-ferror-limit=] 20 errors generated. make: *** [: OMCppPharmacolibrary_Pharmacolibrary.Examples.PKPG_1C_GentamicinCalcHelperMain.o] Error 1 [Calling os._exit(0), Time elapsed: 5.519508834928274]