Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr Pharmacolibrary_Pharmacolibrary.Examples.PKPD_integration.PKPD_HemodynamicsMeurs_flatNorm.conf.json loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo): time 0.0009859/0.0009859, allocations: 100.3 kB / 19.7 MB, free: 444 kB / 13.93 MB " [Timeout remaining time 180] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo): time 0.000964/0.000964, allocations: 209.2 kB / 22.99 MB, free: 2.984 MB / 13.93 MB " [Timeout remaining time 180] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo): time 1.046/1.046, allocations: 230.6 MB / 256.8 MB, free: 9.598 MB / 202.7 MB " [Timeout remaining time 179] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/package.mo", uses=false) [Timeout 180] "[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/Examples/package.order:0:0-0:0:readonly] Warning: The package.order file does not list all .mo files and directories (containing package.mo) present in its directory. Missing names are: Paracetamol_Experiment Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/package.mo): time 1.733/1.733, allocations: 334.2 MB / 0.6323 GB, free: 7.98 MB / 442.7 MB " [Timeout remaining time 178] Using package Pharmacolibrary with version 25.09 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/package.mo) Using package Modelica with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo) Using package Complex with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo) Using package ModelicaServices with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo) Running command: translateModel(Pharmacolibrary.Examples.PKPD_integration.PKPD_HemodynamicsMeurs_flatNorm,tolerance=1e-06,outputFormat="empty",numberOfIntervals=500,variableFilter="",fileNamePrefix="Pharmacolibrary_Pharmacolibrary.Examples.PKPD_integration.PKPD_HemodynamicsMeurs_flatNorm") translateModel(Pharmacolibrary.Examples.PKPD_integration.PKPD_HemodynamicsMeurs_flatNorm,tolerance=1e-06,outputFormat="empty",numberOfIntervals=500,variableFilter="",fileNamePrefix="Pharmacolibrary_Pharmacolibrary.Examples.PKPD_integration.PKPD_HemodynamicsMeurs_flatNorm") [Timeout 660] "Notification: Pharmacolibrary requested package Modelica of version 4.0.0. Modelica 4.1.0 is used instead which states that it is fully compatible without conversion script needed. Notification: Physiolibrary requested package Modelica of version 4.0.0. Modelica 4.1.0 is used instead which states that it is fully compatible without conversion script needed. Notification: Physiolibrary requested package Complex of version 4.0.0. Complex 4.1.0 is used instead which states that it is fully compatible without conversion script needed. Warning: Requested package Chemical of version 1.4.0, but this package was already loaded with version 1.4.1. There are no conversion annotations and 1.4.0 is older than 1.4.1, so the libraries are probably incompatible. Notification: Chemical requested package Modelica of version 4.0.0. Modelica 4.1.0 is used instead which states that it is fully compatible without conversion script needed. Notification: Performance of FrontEnd - loaded program: time 0.002739/0.002739, allocations: 150.8 kB / 1.181 GB, free: 6.523 MB / 0.7293 GB Notification: Performance of FrontEnd - Absyn->SCode: time 0.6661/0.6689, allocations: 123.3 MB / 1.301 GB, free: 68.04 MB / 0.8387 GB Notification: Performance of NFInst.instantiate(Pharmacolibrary.Examples.PKPD_integration.PKPD_HemodynamicsMeurs_flatNorm): time 0.1349/0.8038, allocations: 199.3 MB / 1.496 GB, free: 14.62 MB / 0.9168 GB Notification: Performance of NFInst.instExpressions: time 0.08144/0.8852, allocations: 92.46 MB / 1.586 GB, free: 15.44 MB / 0.9949 GB Notification: Performance of NFInst.updateImplicitVariability: time 0.006858/0.8921, allocations: 142.9 kB / 1.586 GB, free: 15.3 MB / 0.9949 GB Notification: Performance of NFTyping.typeComponents: time 0.006107/0.8982, allocations: 1.353 MB / 1.587 GB, free: 13.94 MB / 0.9949 GB Notification: Performance of NFTyping.typeBindings: time 0.0236/0.9218, allocations: 8.509 MB / 1.596 GB, free: 5.383 MB / 0.9949 GB Notification: Performance of NFTyping.typeClassSections: time 0.0269/0.9487, allocations: 9.892 MB / 1.605 GB, free: 11.43 MB / 1.011 GB Notification: Performance of NFFlatten.flatten: time 0.0119/0.9606, allocations: 8.736 MB / 1.614 GB, free: 2.668 MB / 1.011 GB Notification: Performance of NFFlatten.resolveConnections: time 0.003774/0.9644, allocations: 2.013 MB / 1.616 GB, free: 0.6133 MB / 1.011 GB Notification: Performance of NFEvalConstants.evaluate: time 0.01604/0.9804, allocations: 7.101 MB / 1.623 GB, free: 9.48 MB / 1.026 GB Notification: Performance of NFSimplifyModel.simplify: time 0.006027/0.9864, allocations: 3.218 MB / 1.626 GB, free: 6.25 MB / 1.026 GB Notification: Performance of NFPackage.collectConstants: time 0.001587/0.988, allocations: 336 kB / 1.626 GB, free: 5.922 MB / 1.026 GB Notification: Performance of NFFlatten.collectFunctions: time 0.01533/1.003, allocations: 5.664 MB / 1.632 GB, free: 252 kB / 1.026 GB Notification: Performance of NFScalarize.scalarize: time 0.002146/1.005, allocations: 1.028 MB / 1.633 GB, free: 15.21 MB / 1.042 GB Notification: Performance of NFVerifyModel.verify: time 0.004172/1.01, allocations: 1.739 MB / 1.634 GB, free: 13.46 MB / 1.042 GB Notification: Performance of NFConvertDAE.convert: time 0.0229/1.033, allocations: 9.661 MB / 1.644 GB, free: 3.773 MB / 1.042 GB Notification: Performance of FrontEnd - DAE generated: time 7.343e-06/1.033, allocations: 4 kB / 1.644 GB, free: 3.77 MB / 1.042 GB Notification: Performance of FrontEnd: time 2.144e-06/1.033, allocations: 0 / 1.644 GB, free: 3.77 MB / 1.042 GB Notification: Performance of Transformations before backend: time 0.0002276/1.033, allocations: 0 / 1.644 GB, free: 3.77 MB / 1.042 GB Notification: Model statistics after passing the front-end and creating the data structures used by the back-end: * Number of equations: 651 * Number of variables: 651 Notification: Performance of Generate backend data structure: time 0.01059/1.043, allocations: 6.176 MB / 1.65 GB, free: 13.48 MB / 1.057 GB Notification: Performance of prepare preOptimizeDAE: time 4.49e-05/1.043, allocations: 15.89 kB / 1.65 GB, free: 13.46 MB / 1.057 GB Notification: Performance of preOpt normalInlineFunction (simulation): time 0.000817/1.044, allocations: 401.5 kB / 1.65 GB, free: 13.07 MB / 1.057 GB Notification: Performance of preOpt evaluateParameters (simulation): time 0.002865/1.047, allocations: 1.866 MB / 1.652 GB, free: 11.13 MB / 1.057 GB Notification: Performance of preOpt simplifyIfEquations (simulation): time 0.0001244/1.047, allocations: 213.1 kB / 1.652 GB, free: 10.92 MB / 1.057 GB Notification: Performance of preOpt expandDerOperator (simulation): time 0.0002941/1.048, allocations: 279.9 kB / 1.653 GB, free: 10.65 MB / 1.057 GB Notification: Performance of preOpt clockPartitioning (simulation): time 0.00464/1.052, allocations: 3.456 MB / 1.656 GB, free: 6.934 MB / 1.057 GB Notification: Performance of preOpt findStateOrder (simulation): time 9.064e-05/1.052, allocations: 19.89 kB / 1.656 GB, free: 6.914 MB / 1.057 GB Notification: Performance of preOpt replaceEdgeChange (simulation): time 0.0001905/1.052, allocations: 112 kB / 1.656 GB, free: 6.805 MB / 1.057 GB Notification: Performance of preOpt inlineArrayEqn (simulation): time 4.174e-05/1.052, allocations: 68 kB / 1.656 GB, free: 6.738 MB / 1.057 GB Notification: Performance of preOpt removeEqualRHS (simulation): time 0.004621/1.057, allocations: 2.844 MB / 1.659 GB, free: 3.867 MB / 1.057 GB Warning: The model contains alias variables with redundant start and/or conflicting nominal values. It is recommended to resolve the conflicts, because otherwise the system could be hard to solve. To print the conflicting alias sets and the chosen candidates please use -d=aliasConflicts. Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.01158/1.069, allocations: 9.147 MB / 1.668 GB, free: 10.51 MB / 1.073 GB Notification: Performance of preOpt comSubExp (simulation): time 0.003237/1.072, allocations: 2.502 MB / 1.67 GB, free: 7.988 MB / 1.073 GB Notification: Performance of preOpt resolveLoops (simulation): time 0.001764/1.074, allocations: 1.401 MB / 1.672 GB, free: 6.57 MB / 1.073 GB Notification: Performance of preOpt evalFunc (simulation): time 0.006272/1.08, allocations: 3.346 MB / 1.675 GB, free: 3.191 MB / 1.073 GB Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 0.499/1.579, allocations: 1.911 MB / 1.677 GB, free: 292 MB / 1.073 GB Notification: Performance of pre-optimization done (n=269): time 7.574e-06/1.579, allocations: 0 / 1.677 GB, free: 292 MB / 1.073 GB Notification: Performance of matching and sorting (n=276): time 0.01409/1.593, allocations: 8.252 MB / 1.685 GB, free: 289.1 MB / 1.073 GB Notification: Performance of inlineWhenForInitialization (initialization): time 8.613e-05/1.593, allocations: 259.4 kB / 1.685 GB, free: 288.8 MB / 1.073 GB Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.002439/1.596, allocations: 2.133 MB / 1.687 GB, free: 288 MB / 1.073 GB Notification: Performance of collectPreVariables (initialization): time 0.0003005/1.596, allocations: 97.66 kB / 1.687 GB, free: 288 MB / 1.073 GB Notification: Performance of collectInitialEqns (initialization): time 0.0007129/1.597, allocations: 1.393 MB / 1.689 GB, free: 287 MB / 1.073 GB Notification: Performance of collectInitialBindings (initialization): time 0.0007089/1.597, allocations: 0.9602 MB / 1.69 GB, free: 286.4 MB / 1.073 GB Notification: Performance of simplifyInitialFunctions (initialization): time 0.0006668/1.598, allocations: 0.6661 MB / 1.69 GB, free: 286 MB / 1.073 GB Notification: Performance of setup shared object (initialization): time 3.353e-05/1.598, allocations: 303.8 kB / 1.69 GB, free: 285.8 MB / 1.073 GB Notification: Performance of preBalanceInitialSystem (initialization): time 0.002153/1.6, allocations: 1.552 MB / 1.692 GB, free: 285.2 MB / 1.073 GB Notification: Performance of partitionIndependentBlocks (initialization): time 0.00243/1.603, allocations: 2.249 MB / 1.694 GB, free: 283.7 MB / 1.073 GB Warning: It was not possible to determine if the initialization problem is consistent, because of not evaluable parameters/start values during compile time: Epa.mass = Epa.tm_start (Epa.m_start[1] + Epa.massOffset = Epa.tm_start) Warning: It was not possible to determine if the initialization problem is consistent, because of not evaluable parameters/start values during compile time: Epv.mass = Epv.tm_start (Epv.m_start[1] + Epv.massOffset = Epv.tm_start) Warning: It was not possible to determine if the initialization problem is consistent, because of not evaluable parameters/start values during compile time: LeftAtrium.mass = LeftAtrium.tm_start (LeftAtrium.m_start[1] + LeftAtrium.massOffset = LeftAtrium.tm_start) Warning: It was not possible to determine if the initialization problem is consistent, because of not evaluable parameters/start values during compile time: LeftVentricle.mass = LeftVentricle.tm_start (LeftVentricle.m_start[1] + LeftVentricle.massOffset = LeftVentricle.tm_start) Warning: It was not possible to determine if the initialization problem is consistent, because of not evaluable parameters/start values during compile time: Eitha.mass = Eitha.tm_start (Eitha.m_start[1] + Eitha.massOffset = Eitha.tm_start) Warning: It was not possible to determine if the initialization problem is consistent, because of not evaluable parameters/start values during compile time: Eetha.mass = Eetha.tm_start (Eetha.m_start[1] + Eetha.massOffset = Eetha.tm_start) Warning: It was not possible to determine if the initialization problem is consistent, because of not evaluable parameters/start values during compile time: Est.mass = Est.tm_start (Est.m_start[1] + Est.massOffset = Est.tm_start) Warning: It was not possible to determine if the initialization problem is consistent, because of not evaluable parameters/start values during compile time: Eithv.mass = Eithv.tm_start (Eithv.m_start[1] + Eithv.massOffset = Eithv.tm_start) Warning: It was not possible to determine if the initialization problem is consistent, because of not evaluable parameters/start values during compile time: Eethv.mass = Eethv.tm_start (Eethv.m_start[1] + Eethv.massOffset = Eethv.tm_start) Warning: It was not possible to determine if the initialization problem is consistent, because of not evaluable parameters/start values during compile time: RightAtrium.mass = RightAtrium.tm_start (RightAtrium.m_start[1] + RightAtrium.massOffset = RightAtrium.tm_start) Warning: It was not possible to determine if the initialization problem is consistent, because of not evaluable parameters/start values during compile time: RightVentricle.mass = RightVentricle.tm_start (RightVentricle.m_start[1] + RightVentricle.massOffset = RightVentricle.tm_start) Notification: Performance of analyzeInitialSystem (initialization): time 0.03795/1.641, allocations: 23.24 MB / 1.717 GB, free: 275.2 MB / 1.073 GB Notification: Performance of solveInitialSystemEqSystem (initialization): time 4.872e-05/1.641, allocations: 6.188 kB / 1.717 GB, free: 275.2 MB / 1.073 GB Notification: Performance of matching and sorting (n=484) (initialization): time 0.009141/1.65, allocations: 4.522 MB / 1.721 GB, free: 273.4 MB / 1.073 GB Notification: Performance of prepare postOptimizeDAE: time 8.098e-05/1.65, allocations: 105.2 kB / 1.721 GB, free: 273.3 MB / 1.073 GB Notification: Performance of postOpt simplifyComplexFunction (initialization): time 6.478e-05/1.65, allocations: 24.53 kB / 1.721 GB, free: 273.3 MB / 1.073 GB Notification: Performance of postOpt tearingSystem (initialization): time 0.0009334/1.651, allocations: 0.5038 MB / 1.722 GB, free: 273.1 MB / 1.073 GB Notification: Performance of postOpt solveSimpleEquations (initialization): time 0.002875/1.654, allocations: 0.8004 MB / 1.723 GB, free: 273 MB / 1.073 GB Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 0.004849/1.659, allocations: 11.59 MB / 1.734 GB, free: 261.6 MB / 1.073 GB Notification: Performance of postOpt simplifyAllExpressions (initialization): time 0.003831/1.662, allocations: 199.4 kB / 1.734 GB, free: 261.5 MB / 1.073 GB Notification: Performance of postOpt collapseArrayExpressions (initialization): time 0.0007048/1.663, allocations: 169.9 kB / 1.734 GB, free: 261.5 MB / 1.073 GB Warning: Assuming fixed start value for the following 14 variables: peripheral.AUC:VARIABLE(unit = \"kg.s/m3\" fixed = true ) \"area under curve\" type: Real central.AUC:VARIABLE(unit = \"kg.s/m3\" fixed = true ) \"area under curve\" type: Real singleDose.variableDose.TotalCumulativeMass:VARIABLE(min = -1e-12 unit = \"kg\" fixed = true ) \"Total dose adminitrated by this source\" type: Real singleDose.TotalCumulativeMass:VARIABLE(min = -1e-12 unit = \"kg\" fixed = true ) \"Total dose adminitrated by this source\" type: Real peripheral.Cmin:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real peripheral.Cmax:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real central.Cmin:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real central.Cmax:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real arterialPressure.pressureInt:VARIABLE(fixed = true stateSelect=StateSelect.always protected = true ) type: Real arterialPressure.t0:DISCRETE(unit = \"s\" fixed = true nominal = 60.0 protected = true ) type: Real arterialPressure.diastolicRunning:VARIABLE(unit = \"Pa\" fixed = true nominal = 1e5 stateSelect=StateSelect.always protected = true ) type: Real arterialPressure.systolicRunning:VARIABLE(unit = \"Pa\" fixed = true nominal = 1e5 stateSelect=StateSelect.always protected = true ) type: Real central.rising:DISCRETE(fixed = true protected = true ) type: Boolean peripheral.rising:DISCRETE(fixed = true protected = true ) type: Boolean Warning: The initial conditions are over specified. The following 11 initial equations are redundant, so they are removed from the initialization system: Epa.mass = Epa.tm_start Epv.mass = Epv.tm_start LeftAtrium.mass = LeftAtrium.tm_start LeftVentricle.mass = LeftVentricle.tm_start Eitha.mass = Eitha.tm_start Eetha.mass = Eetha.tm_start Est.mass = Est.tm_start Eithv.mass = Eithv.tm_start Eethv.mass = Eethv.tm_start RightAtrium.mass = RightAtrium.tm_start RightVentricle.mass = RightVentricle.tm_start. Notification: Model statistics after passing the back-end for initialization: * Number of independent subsystems: 105 * Number of states: 0 () * Number of discrete variables: 78 (LAtrialElastance.Tvs,$PRE.LAtrialElastance.Tvs,RAtrialElastance.Tvs,$PRE.RAtrialElastance.Tvs,rightHeartPower.y_last,$PRE.rightHeartPower.y_last,leftHeartPower.y_last,$PRE.leftHeartPower.y_last,$PRE.peripheral.Cmin,peripheral.Cmin,$PRE.peripheral.Cmax,peripheral.Cmax,$PRE.central.Cmin,central.Cmin,$PRE.central.Cmax,central.Cmax,$whenCondition8,$whenCondition7,arterialPressure.meanMeasured,arterialPressure.t0,$PRE.arterialPressure.t0,arterialPressure.b,$whenCondition6,$PRE.RVentricularElastance.HP,$PRE.RAtrialElastance.HP,$PRE.LVentricularElastance.HP,$PRE.LAtrialElastance.HP,$PRE.LAtrialElastance.Tas,$PRE.LAtrialElastance.T0,$PRE.LVentricularElastance.Tas,$PRE.LVentricularElastance.T0,$PRE.LVentricularElastance.Tvs,$PRE.RAtrialElastance.Tas,$PRE.RAtrialElastance.T0,$PRE.RVentricularElastance.Tas,$PRE.RVentricularElastance.T0,$PRE.RVentricularElastance.Tvs,$PRE.singleDose.pulse.T_start,$PRE.singleDose.pulse.count,$PRE.central.rising,$PRE.peripheral.rising,AorticValve.open,LAtrialElastance.Tas,LAtrialElastance.T0,LAtrialElastance.HP,LAtrialElastance.b,LVentricularElastance.Tas,LVentricularElastance.T0,LVentricularElastance.Tvs,LVentricularElastance.HP,LVentricularElastance.b,MitralValve.open,PulmonaryValve.open,RAtrialElastance.Tas,RAtrialElastance.T0,RAtrialElastance.HP,RAtrialElastance.b,RVentricularElastance.Tas,RVentricularElastance.T0,RVentricularElastance.Tvs,RVentricularElastance.HP,RVentricularElastance.b,TricuspidValve.open,arterialPressure.systolicMeassured,arterialPressure.diastolicMeassured,singleDose.pulse.T_start,singleDose.pulse.count,central.rising,peripheral.rising,$whenCondition4,$whenCondition3,$whenCondition2,$whenCondition1,$whenCondition5,$whenCondition9,$whenCondition10,$whenCondition11,$whenCondition12) * Number of discrete states: 0 () * Number of clocked states: 0 () * Top-level inputs: 0 Notification: Strong component statistics for initialization (464): * Single equations (assignments): 446 * Array equations: 0 * Algorithm blocks: 3 * Record equations: 0 * When equations: 0 * If-equations: 0 * Equation systems (not torn): 0 * Torn equation systems: 15 * Mixed (continuous/discrete) equation systems: 0 Notification: Torn system details for strict tearing set: * Linear torn systems (#iteration vars, #inner vars, density): 0 systems * Non-linear torn systems (#iteration vars, #inner vars): 15 systems {(1,1), (1,1), (1,1), (1,1), (1,1), (1,1), (1,1), (1,1), (1,3), (1,1), (1,1), (1,1), (1,1), (1,1), (1,1)} Notification: Performance of prepare postOptimizeDAE: time 0.002003/1.665, allocations: 0.7304 MB / 1.735 GB, free: 261 MB / 1.073 GB Notification: Performance of postOpt lateInlineFunction (simulation): time 0.001/1.666, allocations: 311.4 kB / 1.735 GB, free: 260.9 MB / 1.073 GB Notification: Performance of postOpt wrapFunctionCalls (simulation): time 0.007233/1.673, allocations: 3.585 MB / 1.739 GB, free: 259.4 MB / 1.073 GB Notification: Performance of postOpt inlineArrayEqn (simulation): time 2.607e-05/1.673, allocations: 27.34 kB / 1.739 GB, free: 259.4 MB / 1.073 GB Notification: Performance of postOpt constantLinearSystem (simulation): time 1.51e-05/1.673, allocations: 0 / 1.739 GB, free: 259.4 MB / 1.073 GB Notification: Performance of postOpt simplifysemiLinear (simulation): time 3.026e-05/1.673, allocations: 15.73 kB / 1.739 GB, free: 259.4 MB / 1.073 GB Notification: Performance of postOpt removeSimpleEquations (simulation): time 0.01231/1.686, allocations: 5.675 MB / 1.744 GB, free: 257.1 MB / 1.073 GB Notification: Performance of postOpt simplifyComplexFunction (simulation): time 1.04e-05/1.686, allocations: 0 / 1.744 GB, free: 257.1 MB / 1.073 GB Notification: Performance of postOpt solveSimpleEquations (simulation): time 0.001801/1.688, allocations: 471.9 kB / 1.745 GB, free: 257.1 MB / 1.073 GB Notification: Performance of postOpt tearingSystem (simulation): time 0.0007965/1.688, allocations: 479 kB / 1.745 GB, free: 256.8 MB / 1.073 GB Notification: Performance of postOpt inputDerivativesUsed (simulation): time 0.0002641/1.689, allocations: 89.91 kB / 1.745 GB, free: 256.8 MB / 1.073 GB Notification: Performance of postOpt calculateStrongComponentJacobians (simulation): time 0.004534/1.693, allocations: 11.56 MB / 1.757 GB, free: 245.4 MB / 1.073 GB Notification: Performance of postOpt calculateStateSetsJacobians (simulation): time 2.464e-06/1.693, allocations: 0 / 1.757 GB, free: 245.4 MB / 1.073 GB Notification: Performance of postOpt symbolicJacobian (simulation): time 0.007365/1.7, allocations: 5.246 MB / 1.762 GB, free: 243.2 MB / 1.073 GB Notification: Performance of postOpt removeConstants (simulation): time 0.001491/1.702, allocations: 0.5465 MB / 1.762 GB, free: 242.9 MB / 1.073 GB Notification: Performance of postOpt simplifyTimeIndepFuncCalls (simulation): time 0.0004218/1.702, allocations: 65.94 kB / 1.762 GB, free: 242.8 MB / 1.073 GB Notification: Performance of postOpt simplifyAllExpressions (simulation): time 0.001222/1.704, allocations: 158.1 kB / 1.763 GB, free: 242.8 MB / 1.073 GB Notification: Performance of postOpt findZeroCrossings (simulation): time 0.0004307/1.704, allocations: 237.6 kB / 1.763 GB, free: 242.7 MB / 1.073 GB Notification: Performance of postOpt collapseArrayExpressions (simulation): time 0.0001831/1.704, allocations: 104.9 kB / 1.763 GB, free: 242.7 MB / 1.073 GB Notification: Performance of sorting global known variables: time 0.001644/1.706, allocations: 1.353 MB / 1.764 GB, free: 242.2 MB / 1.073 GB Notification: Performance of sort global known variables: time 8.1e-08/1.706, allocations: 0 / 1.764 GB, free: 242.2 MB / 1.073 GB Notification: Performance of remove unused functions: time 0.005852/1.712, allocations: 2.441 MB / 1.767 GB, free: 241.6 MB / 1.073 GB Notification: Model statistics after passing the back-end for simulation: * Number of independent subsystems: 1 * Number of states: 35 (peripheral.AUC,peripheral.C,elim.MExc,central.AUC,central.C,singleDose.variableDose.TotalCumulativeMass,singleDose.TotalCumulativeMass,arterialPressure.pressureInt,arterialPressure.systolicRunning,arterialPressure.diastolicRunning,leftHeartPower.x,rightHeartPower.x,RightVentricle.substanceMasses[1],RightVentricle.enthalpy,RightAtrium.substanceMasses[1],RightAtrium.enthalpy,Eethv.substanceMasses[1],Eethv.enthalpy,Eithv.substanceMasses[1],Eithv.enthalpy,Est.substanceMasses[1],Est.enthalpy,inertia.q_in.m_flow,Eetha.substanceMasses[1],Eetha.enthalpy,Eitha.substanceMasses[1],Eitha.enthalpy,LeftVentricle.substanceMasses[1],LeftVentricle.enthalpy,LeftAtrium.substanceMasses[1],LeftAtrium.enthalpy,Epv.substanceMasses[1],Epv.enthalpy,Epa.substanceMasses[1],Epa.enthalpy) * Number of discrete variables: 51 (LAtrialElastance.b,LVentricularElastance.b,RAtrialElastance.b,RVentricularElastance.b,arterialPressure.b,$whenCondition12,$whenCondition11,$whenCondition10,$whenCondition9,$whenCondition8,$whenCondition7,$whenCondition6,$whenCondition5,$whenCondition1,$whenCondition2,$whenCondition3,$whenCondition4,peripheral.rising,peripheral.Cmin,peripheral.Cmax,central.rising,central.Cmin,central.Cmax,singleDose.pulse.count,singleDose.pulse.T_start,arterialPressure.meanMeasured,arterialPressure.diastolicMeassured,arterialPressure.systolicMeassured,arterialPressure.t0,leftHeartPower.y_last,rightHeartPower.y_last,TricuspidValve.open,RVentricularElastance.HP,RVentricularElastance.Tvs,RVentricularElastance.T0,RVentricularElastance.Tas,RAtrialElastance.HP,RAtrialElastance.Tvs,RAtrialElastance.T0,RAtrialElastance.Tas,PulmonaryValve.open,MitralValve.open,LVentricularElastance.HP,LVentricularElastance.Tvs,LVentricularElastance.T0,LVentricularElastance.Tas,LAtrialElastance.HP,LAtrialElastance.Tvs,LAtrialElastance.T0,LAtrialElastance.Tas,AorticValve.open) * Number of discrete states: 25 (singleDose.pulse.count,rightHeartPower.x,leftHeartPower.x,arterialPressure.t0,arterialPressure.diastolicRunning,arterialPressure.systolicRunning,arterialPressure.pressureInt,RVentricularElastance.T0,RVentricularElastance.HP,RAtrialElastance.T0,RAtrialElastance.HP,LVentricularElastance.T0,LVentricularElastance.HP,LAtrialElastance.T0,LAtrialElastance.HP,peripheral.Cmin,$whenCondition4,peripheral.Cmax,$whenCondition3,peripheral.rising,central.Cmin,$whenCondition2,central.Cmax,$whenCondition1,central.rising) * Number of clocked states: 0 () * Top-level inputs: 0 Notification: Strong component statistics for simulation (264): * Single equations (assignments): 223 * Array equations: 0 * Algorithm blocks: 2 * Record equations: 0 * When equations: 24 * If-equations: 0 * Equation systems (not torn): 0 * Torn equation systems: 15 * Mixed (continuous/discrete) equation systems: 0 Notification: Torn system details for strict tearing set: * Linear torn systems (#iteration vars, #inner vars, density): 0 systems * Non-linear torn systems (#iteration vars, #inner vars): 15 systems {(1,1), (1,3), (1,1), (1,1), (1,1), (1,1), (1,1), (1,1), (1,1), (1,1), (1,1), (1,1), (1,1), (1,1), (1,1)} Notification: Performance of Backend phase and start with SimCode phase: time 0.005236/1.717, allocations: 2.878 MB / 1.769 GB, free: 240.9 MB / 1.073 GB Notification: Performance of simCode: created initialization part: time 0.006335/1.723, allocations: 3.906 MB / 1.773 GB, free: 239.2 MB / 1.073 GB Notification: Performance of simCode: created event and clocks part: time 1.388e-05/1.723, allocations: 2.719 kB / 1.773 GB, free: 239.2 MB / 1.073 GB Notification: Performance of simCode: created simulation system equations: time 0.002651/1.726, allocations: 2.084 MB / 1.775 GB, free: 238.1 MB / 1.073 GB Notification: Performance of simCode: created of all other equations (e.g. parameter, nominal, assert, etc): time 0.003639/1.73, allocations: 1.043 MB / 1.776 GB, free: 237.8 MB / 1.073 GB Notification: Performance of simCode: created linear, non-linear and system jacobian parts: time 0.01065/1.74, allocations: 7.508 MB / 1.784 GB, free: 234.1 MB / 1.073 GB Notification: Performance of simCode: some other stuff during SimCode phase: time 0.001941/1.742, allocations: 1.34 MB / 1.785 GB, free: 233.8 MB / 1.073 GB Notification: Performance of simCode: all other stuff during SimCode phase: time 0.001516/1.744, allocations: 318.4 kB / 1.785 GB, free: 233.8 MB / 1.073 GB Notification: Performance of SimCode: time 2.154e-06/1.744, allocations: 0 / 1.785 GB, free: 233.8 MB / 1.073 GB Notification: Performance of Templates: time 0.1438/1.888, allocations: 227.2 MB / 2.007 GB, free: 38.91 MB / 1.073 GB " [Timeout remaining time 658] make -j1 -f Pharmacolibrary_Pharmacolibrary.Examples.PKPD_integration.PKPD_HemodynamicsMeurs_flatNorm.makefile [Timeout 660] make -j1 -f Pharmacolibrary_Pharmacolibrary.Examples.PKPD_integration.PKPD_HemodynamicsMeurs_flatNorm.makefile clang++ -std=c++17 -fopenmp=libomp -Winvalid-pch -O2 -g -DNDEBUG -fPIC -std=c++11 -DBOOST_ALL_DYN_LINK -DOMC_BUILD -DUSE_THREAD -I"." -I"/var/lib/jenkins/ws/OpenModelicaLibraryTestingWork/OpenModelica/OMCompiler/build/bin/../include/omc/cpp/" -I. -I"." -I"." -I"/var/lib/jenkins/ws/OpenModelicaLibraryTestingWork/OpenModelica/OMCompiler/build/include/omc/sundials" -DMEASURETIME_PROFILEBLOCKS -DUSE_LOGGER -c -o OMCppPharmacolibrary_Pharmacolibrary.Examples.PKPD_integration.PKPD_HemodynamicsMeurs_flatNormCalcHelperMain.o OMCppPharmacolibrary_Pharmacolibrary.Examples.PKPD_integration.PKPD_HemodynamicsMeurs_flatNormCalcHelperMain.cpp In file included from OMCppPharmacolibrary_Pharmacolibrary.Examples.PKPD_integration.PKPD_HemodynamicsMeurs_flatNormCalcHelperMain.cpp:8: In file included from /var/lib/jenkins/ws/OpenModelicaLibraryTestingWork/OpenModelica/OMCompiler/build/bin/../include/omc/cpp/Core/Modelica.h:206: /var/lib/jenkins/ws/OpenModelicaLibraryTestingWork/OpenModelica/OMCompiler/build/bin/../include/omc/cpp/Core/Math/Array.h:883:14: error: array type 'std::basic_string[1]' is not assignable 883 | _array = otherarray._array; | ~~~~~~ ^ /var/lib/jenkins/ws/OpenModelicaLibraryTestingWork/OpenModelica/OMCompiler/build/bin/../include/omc/cpp/Core/Math/Array.h:1056:6: note: in instantiation of member function 'StatArray, 1>::StatArray' requested here 1056 | :StatArray(otherarray) | ^ ./OMCppPharmacolibrary_Pharmacolibrary.Examples.PKPD_integration.PKPD_HemodynamicsMeurs_flatNormTypes.h:9:8: note: in instantiation of member function 'StatArrayDim1, 1>::StatArrayDim1' requested here 9 | struct Chemical_Interfaces_Incompressible_SubstanceDataType | ^ 1 error generated. make: *** [: OMCppPharmacolibrary_Pharmacolibrary.Examples.PKPD_integration.PKPD_HemodynamicsMeurs_flatNormCalcHelperMain.o] Error 1 [Calling os._exit(0), Time elapsed: 7.940641003195196]