Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr Chemical_master_Chemical.Obsolete.Examples.Hemoglobin.Joels57.conf.json
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo): time 0.001757/0.001757, allocations: 104.4 kB / 19.7 MB, free: 2.125 MB / 14.72 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo): time 0.001753/0.001753, allocations: 213.5 kB / 22.99 MB, free: 4.945 MB / 14.72 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo): time 1.448/1.448, allocations: 230.6 MB / 256.8 MB, free: 7.793 MB / 206.1 MB
"
[Timeout remaining time 178]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/package.mo): time 0.1444/0.1444, allocations: 23.99 MB / 337.2 MB, free: 10.85 MB / 270.1 MB
"
[Timeout remaining time 180]
Using package Chemical with version 2.0.1 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/package.mo)
Using package Modelica with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo)
Using package Complex with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo)
Using package ModelicaServices with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo)
Running command: translateModel(Chemical.Obsolete.Examples.Hemoglobin.Joels57,tolerance=1e-05,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Chemical_master_Chemical.Obsolete.Examples.Hemoglobin.Joels57")
translateModel(Chemical.Obsolete.Examples.Hemoglobin.Joels57,tolerance=1e-05,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Chemical_master_Chemical.Obsolete.Examples.Hemoglobin.Joels57") [Timeout 660]
"Notification: Chemical requested package Modelica of version 4.0.0. Modelica 4.1.0 is used instead which states that it is fully compatible without conversion script needed.
Notification: Performance of FrontEnd - loaded program: time 0.002089/0.002089, allocations: 67.89 kB / 472.5 MB, free: 6.855 MB / 334.1 MB
Notification: Performance of FrontEnd - Absyn->SCode: time 0.3371/0.3392, allocations: 59.9 MB / 0.52 GB, free: 9.734 MB / 382.1 MB
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Obsolete.mo:14335:7-14335:66:writable] Warning: An inner declaration for outer component system could not be found and was automatically generated.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Obsolete.mo:14335:7-14335:66:writable] Notification: The diagnostics message for the missing inner is: 
Your model is using an outer \"system\" component but
an inner \"system\" component is not defined.
For simulation drag Modelica.Fluid.System into your model
to specify system properties.
Notification: Performance of NFInst.instantiate(Chemical.Obsolete.Examples.Hemoglobin.Joels57): time 0.1285/0.4677, allocations: 74.39 MB / 0.5926 GB, free: 15.18 MB / 446.1 MB
Notification: Performance of NFInst.instExpressions: time 0.5692/1.037, allocations: 191.2 MB / 0.7794 GB, free: 16.25 MB / 0.5606 GB
Notification: Performance of NFInst.updateImplicitVariability: time 0.01571/1.053, allocations: 233.4 kB / 0.7796 GB, free: 16.25 MB / 0.5606 GB
Notification: Performance of NFTyping.typeComponents: time 0.01587/1.069, allocations: 4.454 MB / 0.7839 GB, free: 16.23 MB / 0.5606 GB
Notification: Performance of NFTyping.typeBindings: time 0.05593/1.124, allocations: 17.87 MB / 0.8014 GB, free: 15.64 MB / 0.5606 GB
Notification: Performance of NFTyping.typeClassSections: time 0.07826/1.203, allocations: 32.65 MB / 0.8333 GB, free: 15.94 MB / 0.5762 GB
Notification: Performance of NFFlatten.flatten: time 0.0974/1.3, allocations: 89.13 MB / 0.9203 GB, free: 2.004 MB / 0.6387 GB
Notification: Performance of NFFlatten.resolveConnections: time 0.08255/1.383, allocations: 51.84 MB / 0.9709 GB, free: 48 kB / 0.6856 GB
Notification: Performance of NFEvalConstants.evaluate: time 0.7853/2.168, allocations: 56.59 MB / 1.026 GB, free: 43.58 MB / 0.7169 GB
Notification: Performance of NFSimplifyModel.simplify: time 0.09628/2.264, allocations: 54.23 MB / 1.079 GB, free: 40.75 MB / 0.7169 GB
Notification: Performance of NFPackage.collectConstants: time 0.03929/2.303, allocations: 12.2 MB / 1.091 GB, free: 40.75 MB / 0.7169 GB
Notification: Performance of NFFlatten.collectFunctions: time 0.1038/2.407, allocations: 33.89 MB / 1.124 GB, free: 31.12 MB / 0.7169 GB
Notification: Performance of NFScalarize.scalarize: time 0.04178/2.449, allocations: 24.02 MB / 1.148 GB, free: 11.57 MB / 0.7169 GB
Notification: Performance of NFVerifyModel.verify: time 0.1229/2.572, allocations: 39.37 MB / 1.186 GB, free: 12.64 MB / 0.7325 GB
Notification: Performance of NFConvertDAE.convert: time 1.009/3.581, allocations: 159.6 MB / 1.342 GB, free: 107.7 MB / 0.8264 GB
Notification: Performance of FrontEnd - DAE generated: time 7.114e-06/3.581, allocations: 0 / 1.342 GB, free: 107.7 MB / 0.8264 GB
Notification: Performance of FrontEnd: time 1.773e-06/3.581, allocations: 1.719 kB / 1.342 GB, free: 107.7 MB / 0.8264 GB
Notification: Performance of Transformations before backend: time 0.003552/3.584, allocations: 0 / 1.342 GB, free: 107.7 MB / 0.8264 GB
Notification: Model statistics after passing the front-end and creating the data structures used by the back-end:
 * Number of equations: 11424
 * Number of variables: 11424
Notification: Performance of Generate backend data structure: time 0.2905/3.875, allocations: 71.67 MB / 1.412 GB, free: 87.26 MB / 0.8264 GB
Notification: Performance of prepare preOptimizeDAE: time 4.559e-05/3.875, allocations: 11.81 kB / 1.412 GB, free: 87.26 MB / 0.8264 GB
Notification: Performance of preOpt normalInlineFunction (simulation): time 0.08931/3.964, allocations: 11.94 MB / 1.424 GB, free: 83.18 MB / 0.8264 GB
Notification: Performance of preOpt evaluateParameters (simulation): time 0.1052/4.069, allocations: 42.61 MB / 1.465 GB, free: 65.55 MB / 0.8264 GB
Notification: Performance of preOpt simplifyIfEquations (simulation): time 0.006552/4.076, allocations: 9.243 MB / 1.474 GB, free: 56.17 MB / 0.8264 GB
Notification: Performance of preOpt expandDerOperator (simulation): time 0.03732/4.113, allocations: 4.596 MB / 1.479 GB, free: 51.57 MB / 0.8264 GB
Notification: Performance of preOpt clockPartitioning (simulation): time 0.3031/4.417, allocations: 112.9 MB / 1.589 GB, free: 2.008 MB / 0.8889 GB
Notification: Performance of preOpt findStateOrder (simulation): time 0.002144/4.419, allocations: 30.75 kB / 1.589 GB, free: 1.996 MB / 0.8889 GB
Notification: Performance of preOpt replaceEdgeChange (simulation): time 0.0347/4.453, allocations: 1.758 MB / 1.591 GB, free: 244 kB / 0.8889 GB
Notification: Performance of preOpt inlineArrayEqn (simulation): time 0.001025/4.454, allocations: 1.059 MB / 1.592 GB, free: 15.18 MB / 0.9045 GB
Notification: Performance of preOpt removeEqualRHS (simulation): time 0.6837/5.138, allocations: 153 MB / 1.741 GB, free: 333.2 MB / 0.9358 GB
Warning: The model contains alias variables with redundant start and/or conflicting nominal values. It is recommended to resolve the conflicts, because otherwise the system could be hard to solve. To print the conflicting alias sets and the chosen candidates please use -d=aliasConflicts.
Notification: Performance of preOpt removeSimpleEquations (simulation): time 1.256/6.394, allocations: 389 MB / 2.121 GB, free: 280.7 MB / 0.9358 GB
Notification: Performance of preOpt comSubExp (simulation): time 2.158/8.552, allocations: 0.6474 GB / 2.769 GB, free: 198.2 MB / 0.9358 GB
Notification: Performance of preOpt resolveLoops (simulation): time 0.1028/8.655, allocations: 60.06 MB / 2.827 GB, free: 140.1 MB / 0.9358 GB
Notification: Performance of preOpt evalFunc (simulation): time 0.9031/9.558, allocations: 254.6 MB / 3.076 GB, free: 272.6 MB / 0.9358 GB
Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 0.000294/9.558, allocations: 336.2 kB / 3.076 GB, free: 272.3 MB / 0.9358 GB
Notification: Performance of preOpt simplifyInStream (simulation): time 0.09277/9.651, allocations: 29.13 MB / 3.105 GB, free: 265.5 MB / 0.9358 GB
Notification: Performance of pre-optimization done (n=2985): time 0.0002113/9.651, allocations: 1.656 kB / 3.105 GB, free: 265.5 MB / 0.9358 GB
Notification: Performance of matching and sorting (n=3387): time 2.456/12.11, allocations: 423.7 MB / 3.518 GB, free: 258.1 MB / 0.9358 GB
Notification: Performance of inlineWhenForInitialization (initialization): time 0.0006156/12.11, allocations: 447.8 kB / 3.519 GB, free: 257.9 MB / 0.9358 GB
Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.06557/12.17, allocations: 30.72 MB / 3.549 GB, free: 242.7 MB / 0.9358 GB
Notification: Performance of collectPreVariables (initialization): time 0.01568/12.19, allocations: 0.5788 MB / 3.549 GB, free: 242.2 MB / 0.9358 GB
Notification: Performance of collectInitialEqns (initialization): time 0.01687/12.21, allocations: 21.64 MB / 3.57 GB, free: 226.2 MB / 0.9358 GB
Notification: Performance of collectInitialBindings (initialization): time 0.0269/12.23, allocations: 12.42 MB / 3.583 GB, free: 213.9 MB / 0.9358 GB
Notification: Performance of simplifyInitialFunctions (initialization): time 0.05802/12.29, allocations: 9.93 MB / 3.592 GB, free: 203.9 MB / 0.9358 GB
Notification: Performance of setup shared object (initialization): time 5.746e-05/12.29, allocations: 305.1 kB / 3.593 GB, free: 203.6 MB / 0.9358 GB
Notification: Performance of preBalanceInitialSystem (initialization): time 0.06857/12.36, allocations: 39.04 MB / 3.631 GB, free: 164.6 MB / 0.9358 GB
Notification: Performance of partitionIndependentBlocks (initialization): time 0.08287/12.44, allocations: 53.25 MB / 3.683 GB, free: 105.1 MB / 0.9358 GB
Notification: Performance of analyzeInitialSystem (initialization): time 0.6238/13.07, allocations: 96.36 MB / 3.777 GB, free: 273.5 MB / 0.9358 GB
Notification: Performance of solveInitialSystemEqSystem (initialization): time 0.000516/13.07, allocations: 130.5 kB / 3.777 GB, free: 273.5 MB / 0.9358 GB
Notification: Performance of matching and sorting (n=5667) (initialization): time 1.357/14.42, allocations: 257.1 MB / 4.028 GB, free: 133.6 MB / 0.9358 GB
Notification: Performance of prepare postOptimizeDAE: time 0.0006505/14.42, allocations: 196 kB / 4.028 GB, free: 133.4 MB / 0.9358 GB
Notification: Performance of postOpt simplifyComplexFunction (initialization): time 0.0009214/14.43, allocations: 446.5 kB / 4.029 GB, free: 133 MB / 0.9358 GB
Notification: Performance of postOpt tearingSystem (initialization): time 0.175/14.6, allocations: 73.71 MB / 4.101 GB, free: 59.5 MB / 0.9358 GB
Notification: Performance of postOpt solveSimpleEquations (initialization): time 0.04963/14.65, allocations: 11.18 MB / 4.112 GB, free: 48.32 MB / 0.9358 GB
Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 1.042/15.69, allocations: 309.6 MB / 4.414 GB, free: 122.2 MB / 0.9358 GB
Notification: Performance of postOpt simplifyAllExpressions (initialization): time 0.05448/15.75, allocations: 2.476 MB / 4.416 GB, free: 119.7 MB / 0.9358 GB
Notification: Performance of postOpt collapseArrayExpressions (initialization): time 0.0163/15.76, allocations: 2.805 MB / 4.419 GB, free: 116.9 MB / 0.9358 GB
Notification: Model statistics after passing the back-end for initialization:
 * Number of independent subsystems: 2031
 * Number of states: 0 ()
 * Number of discrete variables: 0 ()
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for initialization (5523):
 * Single equations (assignments): 5514
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 0
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 9
 * Mixed (continuous/discrete) equation systems: 0
Notification: Torn system details for strict tearing set:
 * Linear torn systems (#iteration vars, #inner vars, density): 6 systems
   {(1,3,100.0%), (33,10,82.4%), (1,3,100.0%), (33,10,82.4%), (1,3,100.0%), (33,10,82.4%)}
 * Non-linear torn systems (#iteration vars, #inner vars): 3 systems
   {(1,3), (1,3), (1,3)}
Notification: Performance of prepare postOptimizeDAE: time 0.04959/15.81, allocations: 18.33 MB / 4.437 GB, free: 99.29 MB / 0.9358 GB
Notification: Performance of postOpt lateInlineFunction (simulation): time 0.02306/15.84, allocations: 3.17 MB / 4.44 GB, free: 97.88 MB / 0.9358 GB
Notification: Performance of postOpt wrapFunctionCalls (simulation): time 1.248/17.08, allocations: 152.3 MB / 4.589 GB, free: 252.5 MB / 0.9358 GB
Notification: Performance of postOpt inlineArrayEqn (simulation): time 0.0003671/17.08, allocations: 359.5 kB / 4.589 GB, free: 252.5 MB / 0.9358 GB
Notification: Performance of postOpt constantLinearSystem (simulation): time 0.0005266/17.08, allocations: 56.31 kB / 4.589 GB, free: 252.5 MB / 0.9358 GB
Notification: Performance of postOpt simplifysemiLinear (simulation): time 0.001214/17.09, allocations: 180.5 kB / 4.589 GB, free: 252.5 MB / 0.9358 GB
Notification: Performance of postOpt removeSimpleEquations (simulation): time 0.9704/18.06, allocations: 223.2 MB / 4.807 GB, free: 115.2 MB / 0.9358 GB
Notification: Performance of postOpt simplifyComplexFunction (simulation): time 0.000357/18.06, allocations: 8.891 kB / 4.807 GB, free: 115.2 MB / 0.9358 GB
Notification: Performance of postOpt solveSimpleEquations (simulation): time 0.04468/18.1, allocations: 7.252 MB / 4.814 GB, free: 107.9 MB / 0.9358 GB
Notification: Performance of postOpt tearingSystem (simulation): time 0.09852/18.2, allocations: 39.75 MB / 4.853 GB, free: 68.46 MB / 0.9358 GB
Notification: Performance of postOpt inputDerivativesUsed (simulation): time 0.01277/18.21, allocations: 1.448 MB / 4.855 GB, free: 67.01 MB / 0.9358 GB
Notification: Performance of postOpt calculateStrongComponentJacobians (simulation): time 0.7805/18.99, allocations: 155.6 MB / 5.007 GB, free: 232.2 MB / 0.9358 GB
Notification: Performance of postOpt calculateStateSetsJacobians (simulation): time 1.066e-05/18.99, allocations: 15.28 kB / 5.007 GB, free: 232.2 MB / 0.9358 GB
Notification: Performance of postOpt symbolicJacobian (simulation): time 0.8956/19.89, allocations: 200.2 MB / 5.202 GB, free: 96.91 MB / 0.9358 GB
Notification: Performance of postOpt removeConstants (simulation): time 0.03643/19.92, allocations: 11.32 MB / 5.213 GB, free: 87.48 MB / 0.9358 GB
Notification: Performance of postOpt simplifyTimeIndepFuncCalls (simulation): time 0.01819/19.94, allocations: 0.9138 MB / 5.214 GB, free: 86.56 MB / 0.9358 GB
Notification: Performance of postOpt simplifyAllExpressions (simulation): time 0.04141/19.98, allocations: 1.549 MB / 5.216 GB, free: 85.01 MB / 0.9358 GB
Notification: Performance of postOpt findZeroCrossings (simulation): time 0.02315/20.01, allocations: 4.68 MB / 5.22 GB, free: 80.32 MB / 0.9358 GB
Notification: Performance of postOpt collapseArrayExpressions (simulation): time 0.0106/20.02, allocations: 1.386 MB / 5.222 GB, free: 78.93 MB / 0.9358 GB
Notification: Performance of sorting global known variables: time 0.04979/20.07, allocations: 20.8 MB / 5.242 GB, free: 58.27 MB / 0.9358 GB
Notification: Performance of sort global known variables: time 3.41e-07/20.07, allocations: 4 kB / 5.242 GB, free: 58.26 MB / 0.9358 GB
Notification: Performance of remove unused functions: time 0.1081/20.18, allocations: 20.21 MB / 5.262 GB, free: 38.25 MB / 0.9358 GB
Notification: Model statistics after passing the back-end for simulation:
 * Number of independent subsystems: 45
 * Number of states: 180 (pCO2_2000.solution.temperature,pCO2_2000.O2_free.logn,pCO2_2000.H2O.logn,pCO2_2000.relaxed.OxyHm[1].logn,pCO2_2000.relaxed.OxyHm[2].logn,pCO2_2000.relaxed.OxyHm[3].logn,pCO2_2000.relaxed.OxyHm[4].logn,pCO2_2000.relaxed.DeoxyHm[1].logn,pCO2_2000.relaxed.DeoxyHm[2].logn,pCO2_2000.relaxed.DeoxyHm[3].logn,pCO2_2000.relaxed.DeoxyHm[4].logn,pCO2_2000.relaxed.HmAH[1].logn,pCO2_2000.relaxed.HmAH[2].logn,pCO2_2000.relaxed.HmAH[3].logn,pCO2_2000.relaxed.HmAH[4].logn,pCO2_2000.relaxed.HmA[1].logn,pCO2_2000.relaxed.HmA[2].logn,pCO2_2000.relaxed.HmA[3].logn,pCO2_2000.relaxed.HmA[4].logn,pCO2_2000.relaxed.HmNH3[1].logn,pCO2_2000.relaxed.HmNH3[2].logn,pCO2_2000.relaxed.HmNH3[3].logn,pCO2_2000.relaxed.HmNH3[4].logn,pCO2_2000.relaxed.HmNH2[1].logn,pCO2_2000.relaxed.HmNH2[2].logn,pCO2_2000.relaxed.HmNH2[3].logn,pCO2_2000.relaxed.HmNH2[4].logn,pCO2_2000.relaxed.HmNHCOO[1].logn,pCO2_2000.relaxed.HmNHCOO[2].logn,pCO2_2000.relaxed.HmNHCOO[3].logn,pCO2_2000.relaxed.HmNHCOO[4].logn,pCO2_2000.tensed.OxyHm[1].logn,pCO2_2000.tensed.OxyHm[2].logn,pCO2_2000.tensed.OxyHm[3].logn,pCO2_2000.tensed.OxyHm[4].logn,pCO2_2000.tensed.DeoxyHm[1].logn,pCO2_2000.tensed.DeoxyHm[2].logn,pCO2_2000.tensed.DeoxyHm[3].logn,pCO2_2000.tensed.DeoxyHm[4].logn,pCO2_2000.tensed.HmAH[1].logn,pCO2_2000.tensed.HmAH[2].logn,pCO2_2000.tensed.HmAH[3].logn,pCO2_2000.tensed.HmAH[4].logn,pCO2_2000.tensed.HmA[1].logn,pCO2_2000.tensed.HmA[2].logn,pCO2_2000.tensed.HmA[3].logn,pCO2_2000.tensed.HmA[4].logn,pCO2_2000.tensed.HmNH3[1].logn,pCO2_2000.tensed.HmNH3[2].logn,pCO2_2000.tensed.HmNH3[3].logn,pCO2_2000.tensed.HmNH3[4].logn,pCO2_2000.tensed.HmNH2[1].logn,pCO2_2000.tensed.HmNH2[2].logn,pCO2_2000.tensed.HmNH2[3].logn,pCO2_2000.tensed.HmNH2[4].logn,pCO2_2000.tensed.HmNHCOO[1].logn,pCO2_2000.tensed.HmNHCOO[2].logn,pCO2_2000.tensed.HmNHCOO[3].logn,pCO2_2000.tensed.HmNHCOO[4].logn,pCO2_2000.CO2_free.logn,pCO2_5330.solution.temperature,pCO2_5330.O2_free.logn,pCO2_5330.H2O.logn,pCO2_5330.relaxed.OxyHm[1].logn,pCO2_5330.relaxed.OxyHm[2].logn,pCO2_5330.relaxed.OxyHm[3].logn,pCO2_5330.relaxed.OxyHm[4].logn,pCO2_5330.relaxed.DeoxyHm[1].logn,pCO2_5330.relaxed.DeoxyHm[2].logn,pCO2_5330.relaxed.DeoxyHm[3].logn,pCO2_5330.relaxed.DeoxyHm[4].logn,pCO2_5330.relaxed.HmAH[1].logn,pCO2_5330.relaxed.HmAH[2].logn,pCO2_5330.relaxed.HmAH[3].logn,pCO2_5330.relaxed.HmAH[4].logn,pCO2_5330.relaxed.HmA[1].logn,pCO2_5330.relaxed.HmA[2].logn,pCO2_5330.relaxed.HmA[3].logn,pCO2_5330.relaxed.HmA[4].logn,pCO2_5330.relaxed.HmNH3[1].logn,pCO2_5330.relaxed.HmNH3[2].logn,pCO2_5330.relaxed.HmNH3[3].logn,pCO2_5330.relaxed.HmNH3[4].logn,pCO2_5330.relaxed.HmNH2[1].logn,pCO2_5330.relaxed.HmNH2[2].logn,pCO2_5330.relaxed.HmNH2[3].logn,pCO2_5330.relaxed.HmNH2[4].logn,pCO2_5330.relaxed.HmNHCOO[1].logn,pCO2_5330.relaxed.HmNHCOO[2].logn,pCO2_5330.relaxed.HmNHCOO[3].logn,pCO2_5330.relaxed.HmNHCOO[4].logn,pCO2_5330.tensed.OxyHm[1].logn,pCO2_5330.tensed.OxyHm[2].logn,pCO2_5330.tensed.OxyHm[3].logn,pCO2_5330.tensed.OxyHm[4].logn,pCO2_5330.tensed.DeoxyHm[1].logn,pCO2_5330.tensed.DeoxyHm[2].logn,pCO2_5330.tensed.DeoxyHm[3].logn,pCO2_5330.tensed.DeoxyHm[4].logn,pCO2_5330.tensed.HmAH[1].logn,pCO2_5330.tensed.HmAH[2].logn,pCO2_5330.tensed.HmAH[3].logn,pCO2_5330.tensed.HmAH[4].logn,pCO2_5330.tensed.HmA[1].logn,pCO2_5330.tensed.HmA[2].logn,pCO2_5330.tensed.HmA[3].logn,pCO2_5330.tensed.HmA[4].logn,pCO2_5330.tensed.HmNH3[1].logn,pCO2_5330.tensed.HmNH3[2].logn,pCO2_5330.tensed.HmNH3[3].logn,pCO2_5330.tensed.HmNH3[4].logn,pCO2_5330.tensed.HmNH2[1].logn,pCO2_5330.tensed.HmNH2[2].logn,pCO2_5330.tensed.HmNH2[3].logn,pCO2_5330.tensed.HmNH2[4].logn,pCO2_5330.tensed.HmNHCOO[1].logn,pCO2_5330.tensed.HmNHCOO[2].logn,pCO2_5330.tensed.HmNHCOO[3].logn,pCO2_5330.tensed.HmNHCOO[4].logn,pCO2_5330.CO2_free.logn,pCO2_9330.solution.temperature,pCO2_9330.O2_free.logn,pCO2_9330.H2O.logn,pCO2_9330.relaxed.OxyHm[1].logn,pCO2_9330.relaxed.OxyHm[2].logn,pCO2_9330.relaxed.OxyHm[3].logn,pCO2_9330.relaxed.OxyHm[4].logn,pCO2_9330.relaxed.DeoxyHm[1].logn,pCO2_9330.relaxed.DeoxyHm[2].logn,pCO2_9330.relaxed.DeoxyHm[3].logn,pCO2_9330.relaxed.DeoxyHm[4].logn,pCO2_9330.relaxed.HmAH[1].logn,pCO2_9330.relaxed.HmAH[2].logn,pCO2_9330.relaxed.HmAH[3].logn,pCO2_9330.relaxed.HmAH[4].logn,pCO2_9330.relaxed.HmA[1].logn,pCO2_9330.relaxed.HmA[2].logn,pCO2_9330.relaxed.HmA[3].logn,pCO2_9330.relaxed.HmA[4].logn,pCO2_9330.relaxed.HmNH3[1].logn,pCO2_9330.relaxed.HmNH3[2].logn,pCO2_9330.relaxed.HmNH3[3].logn,pCO2_9330.relaxed.HmNH3[4].logn,pCO2_9330.relaxed.HmNH2[1].logn,pCO2_9330.relaxed.HmNH2[2].logn,pCO2_9330.relaxed.HmNH2[3].logn,pCO2_9330.relaxed.HmNH2[4].logn,pCO2_9330.relaxed.HmNHCOO[1].logn,pCO2_9330.relaxed.HmNHCOO[2].logn,pCO2_9330.relaxed.HmNHCOO[3].logn,pCO2_9330.relaxed.HmNHCOO[4].logn,pCO2_9330.tensed.OxyHm[1].logn,pCO2_9330.tensed.OxyHm[2].logn,pCO2_9330.tensed.OxyHm[3].logn,pCO2_9330.tensed.OxyHm[4].logn,pCO2_9330.tensed.DeoxyHm[1].logn,pCO2_9330.tensed.DeoxyHm[2].logn,pCO2_9330.tensed.DeoxyHm[3].logn,pCO2_9330.tensed.DeoxyHm[4].logn,pCO2_9330.tensed.HmAH[1].logn,pCO2_9330.tensed.HmAH[2].logn,pCO2_9330.tensed.HmAH[3].logn,pCO2_9330.tensed.HmAH[4].logn,pCO2_9330.tensed.HmA[1].logn,pCO2_9330.tensed.HmA[2].logn,pCO2_9330.tensed.HmA[3].logn,pCO2_9330.tensed.HmA[4].logn,pCO2_9330.tensed.HmNH3[1].logn,pCO2_9330.tensed.HmNH3[2].logn,pCO2_9330.tensed.HmNH3[3].logn,pCO2_9330.tensed.HmNH3[4].logn,pCO2_9330.tensed.HmNH2[1].logn,pCO2_9330.tensed.HmNH2[2].logn,pCO2_9330.tensed.HmNH2[3].logn,pCO2_9330.tensed.HmNH2[4].logn,pCO2_9330.tensed.HmNHCOO[1].logn,pCO2_9330.tensed.HmNHCOO[2].logn,pCO2_9330.tensed.HmNHCOO[3].logn,pCO2_9330.tensed.HmNHCOO[4].logn,pCO2_9330.CO2_free.logn)
 * Number of discrete variables: 0 ()
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for simulation (3702):
 * Single equations (assignments): 3693
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 0
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 9
 * Mixed (continuous/discrete) equation systems: 0
Notification: Torn system details for strict tearing set:
 * Linear torn systems (#iteration vars, #inner vars, density): 6 systems
   {(1,3,100.0%), (33,10,82.4%), (1,3,100.0%), (33,10,82.4%), (1,3,100.0%), (33,10,82.4%)}
 * Non-linear torn systems (#iteration vars, #inner vars): 3 systems
   {(1,3), (1,3), (1,3)}
Notification: Performance of Backend phase and start with SimCode phase: time 0.03313/20.21, allocations: 10.81 MB / 5.272 GB, free: 28.73 MB / 0.9358 GB
Notification: Performance of simCode: created initialization part: time 0.6235/20.83, allocations: 85.28 MB / 5.355 GB, free: 256 MB / 0.9358 GB
Notification: Performance of simCode: created event and clocks part: time 1.881e-05/20.83, allocations: 2.062 kB / 5.355 GB, free: 256 MB / 0.9358 GB
Notification: Performance of simCode: created simulation system equations: time 0.1342/20.97, allocations: 54.51 MB / 5.409 GB, free: 234.4 MB / 0.9358 GB
Notification: Performance of simCode: created of all other equations (e.g. parameter, nominal, assert, etc): time 0.05842/21.03, allocations: 7.688 MB / 5.416 GB, free: 231.5 MB / 0.9358 GB
Notification: Performance of simCode: created linear, non-linear and system jacobian parts: time 0.2957/21.32, allocations: 121.8 MB / 5.535 GB, free: 147.1 MB / 0.9358 GB
Notification: Performance of simCode: some other stuff during SimCode phase: time 0.05378/21.37, allocations: 29.65 MB / 5.564 GB, free: 125.3 MB / 0.9358 GB
Notification: Performance of simCode: all other stuff during SimCode phase: time 0.03012/21.4, allocations: 4.609 MB / 5.569 GB, free: 121.4 MB / 0.9358 GB
Notification: Performance of SimCode: time 1.263e-06/21.4, allocations: 0 / 5.569 GB, free: 121.4 MB / 0.9358 GB
Notification: Performance of Templates: time 7.857/29.26, allocations: 3.31 GB / 8.879 GB, free: 28.96 MB / 0.9827 GB
"
[Timeout remaining time 631]
make -j1 -f Chemical_master_Chemical.Obsolete.Examples.Hemoglobin.Joels57.makefile [Timeout 660]
(rm -f Chemical_master_Chemical.Obsolete.Examples.Hemoglobin.Joels57.pipe ; mkfifo Chemical_master_Chemical.Obsolete.Examples.Hemoglobin.Joels57.pipe ; head -c 1048576 < Chemical_master_Chemical.Obsolete.Examples.Hemoglobin.Joels57.pipe >> ../files/Chemical_master_Chemical.Obsolete.Examples.Hemoglobin.Joels57.sim & ./Chemical_master_Chemical.Obsolete.Examples.Hemoglobin.Joels57  -abortSlowSimulation -alarm=480 -lv LOG_STATS > Chemical_master_Chemical.Obsolete.Examples.Hemoglobin.Joels57.pipe 2>&1) [Timeout 480]
[Calling sys.exit(0), Time elapsed: 113.56943755410612]
Failed to read output from testmodel.py, exit status != 0:
29.272211270872504 29.281722411 25.697993894
Calling exit ...
<OMPython.OMCSessionZMQ object at 0x7f1a45ee6fe0>