Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr Bodylight_Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.conf.json
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo): time 0.00106/0.00106, allocations: 100.3 kB / 19.71 MB, free: 440 kB / 13.93 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo): time 0.001273/0.001273, allocations: 211.9 kB / 22.99 MB, free: 2.992 MB / 13.93 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo): time 1.011/1.011, allocations: 230.6 MB / 256.8 MB, free: 9.613 MB / 202.7 MB
"
[Timeout remaining time 179]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/package.mo): time 0.0578/0.0578, allocations: 17.16 MB / 330.3 MB, free: 0.7344 MB / 250.7 MB
"
[Timeout remaining time 180]
Using package Bodylight with version 1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/package.mo)
Using package Modelica with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo)
Using package Complex with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo)
Using package ModelicaServices with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo)
Running command: translateModel(Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC,tolerance=1e-14,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Bodylight_Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC")
translateModel(Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC,tolerance=1e-14,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Bodylight_Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC") [Timeout 660]
"Notification: Bodylight requested package Modelica of version 4.0.0. Modelica 4.1.0 is used instead which states that it is fully compatible without conversion script needed.
Notification: Performance of FrontEnd - loaded program: time 0.004813/0.004813, allocations: 67.89 kB / 460.7 MB, free: 27.14 MB / 330.7 MB
Notification: Performance of FrontEnd - Absyn->SCode: time 0.09567/0.1005, allocations: 57.77 MB / 0.5063 GB, free: 1.266 MB / 362.7 MB
Notification: Performance of NFInst.instantiate(Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC): time 0.006895/0.1074, allocations: 9.34 MB / 0.5154 GB, free: 7.883 MB / 378.7 MB
Notification: Performance of NFInst.instExpressions: time 0.01081/0.1182, allocations: 11.02 MB / 0.5262 GB, free: 12.82 MB / 394.7 MB
Notification: Performance of NFInst.updateImplicitVariability: time 0.001168/0.1194, allocations: 102.9 kB / 0.5263 GB, free: 12.71 MB / 394.7 MB
Notification: Performance of NFTyping.typeComponents: time 0.0006783/0.12, allocations: 400.1 kB / 0.5267 GB, free: 12.32 MB / 394.7 MB
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T0.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T0.Utilities.readReal' contains a call to impure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T0.Utilities.UnitConversions.findUnit'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T1.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T1.Utilities.readReal' contains a call to impure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T1.Utilities.UnitConversions.findUnit'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R1.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R1.Utilities.readReal' contains a call to impure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R1.Utilities.UnitConversions.findUnit'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T2.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T2.Utilities.readReal' contains a call to impure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T2.Utilities.UnitConversions.findUnit'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R2.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R2.Utilities.readReal' contains a call to impure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R2.Utilities.UnitConversions.findUnit'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T3.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T3.Utilities.readReal' contains a call to impure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T3.Utilities.UnitConversions.findUnit'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R3.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R3.Utilities.readReal' contains a call to impure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R3.Utilities.UnitConversions.findUnit'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T4.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T4.Utilities.readReal' contains a call to impure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T4.Utilities.UnitConversions.findUnit'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R4.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R4.Utilities.readReal' contains a call to impure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R4.Utilities.UnitConversions.findUnit'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R0.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R0.Utilities.readReal' contains a call to impure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R0.Utilities.UnitConversions.findUnit'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.oxygen_unbound.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.oxygen_unbound.Utilities.readReal' contains a call to impure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.oxygen_unbound.Utilities.UnitConversions.findUnit'.
Notification: Performance of NFTyping.typeBindings: time 0.004409/0.1244, allocations: 2.153 MB / 0.5288 GB, free: 10.16 MB / 394.7 MB
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T0.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T0.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T1.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T1.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R1.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R1.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T2.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T2.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R2.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R2.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T3.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T3.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R3.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R3.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T4.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T4.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R4.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R4.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R0.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R0.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.oxygen_unbound.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.oxygen_unbound.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
Notification: Performance of NFTyping.typeClassSections: time 0.003358/0.1278, allocations: 2.034 MB / 0.5308 GB, free: 8.148 MB / 394.7 MB
Notification: Performance of NFFlatten.flatten: time 0.002552/0.1304, allocations: 2.768 MB / 0.5335 GB, free: 5.363 MB / 394.7 MB
Notification: Performance of NFFlatten.resolveConnections: time 0.0005403/0.1309, allocations: 388.1 kB / 0.5338 GB, free: 4.957 MB / 394.7 MB
Notification: Performance of NFEvalConstants.evaluate: time 0.001261/0.1322, allocations: 0.9962 MB / 0.5348 GB, free: 3.957 MB / 394.7 MB
Notification: Performance of NFSimplifyModel.simplify: time 0.001209/0.1334, allocations: 1.322 MB / 0.5361 GB, free: 2.629 MB / 394.7 MB
Notification: Performance of NFPackage.collectConstants: time 0.0002055/0.1336, allocations: 147.9 kB / 0.5362 GB, free: 2.484 MB / 394.7 MB
Notification: Performance of NFFlatten.collectFunctions: time 0.0003025/0.1339, allocations: 160 kB / 0.5364 GB, free: 2.328 MB / 394.7 MB
Notification: Performance of NFScalarize.scalarize: time 0.0003104/0.1342, allocations: 0.5253 MB / 0.5369 GB, free: 1.801 MB / 394.7 MB
Notification: Performance of NFVerifyModel.verify: time 0.0006211/0.1348, allocations: 0.8705 MB / 0.5378 GB, free: 0.9258 MB / 394.7 MB
Notification: Performance of NFConvertDAE.convert: time 0.001631/0.1364, allocations: 2.474 MB / 0.5402 GB, free: 14.44 MB / 410.7 MB
Notification: Performance of FrontEnd - DAE generated: time 4.058e-06/0.1364, allocations: 0 / 0.5402 GB, free: 14.44 MB / 410.7 MB
Notification: Performance of FrontEnd: time 1.814e-06/0.1364, allocations: 0 / 0.5402 GB, free: 14.44 MB / 410.7 MB
Notification: Performance of Transformations before backend: time 3.774e-05/0.1365, allocations: 0 / 0.5402 GB, free: 14.44 MB / 410.7 MB
Notification: Model statistics after passing the front-end and creating the data structures used by the back-end:
 * Number of equations: 287
 * Number of variables: 287
Notification: Performance of Generate backend data structure: time 0.003192/0.1397, allocations: 2.581 MB / 0.5427 GB, free: 11.81 MB / 410.7 MB
Notification: Performance of prepare preOptimizeDAE: time 4.291e-05/0.1397, allocations: 12.03 kB / 0.5427 GB, free: 11.8 MB / 410.7 MB
Notification: Performance of preOpt normalInlineFunction (simulation): time 0.000632/0.1403, allocations: 327.3 kB / 0.543 GB, free: 11.48 MB / 410.7 MB
Notification: Performance of preOpt evaluateParameters (simulation): time 0.001596/0.1419, allocations: 1.34 MB / 0.5443 GB, free: 10.1 MB / 410.7 MB
Notification: Performance of preOpt simplifyIfEquations (simulation): time 4.504e-05/0.142, allocations: 90.64 kB / 0.5444 GB, free: 10.01 MB / 410.7 MB
Notification: Performance of preOpt expandDerOperator (simulation): time 0.0001135/0.1421, allocations: 120.1 kB / 0.5445 GB, free: 9.895 MB / 410.7 MB
Notification: Performance of preOpt clockPartitioning (simulation): time 0.001405/0.1435, allocations: 1.302 MB / 0.5458 GB, free: 8.551 MB / 410.7 MB
Notification: Performance of preOpt findStateOrder (simulation): time 1.935e-05/0.1435, allocations: 0 / 0.5458 GB, free: 8.551 MB / 410.7 MB
Notification: Performance of preOpt replaceEdgeChange (simulation): time 6.664e-05/0.1436, allocations: 48 kB / 0.5459 GB, free: 8.504 MB / 410.7 MB
Notification: Performance of preOpt inlineArrayEqn (simulation): time 1.712e-05/0.1436, allocations: 31.94 kB / 0.5459 GB, free: 8.473 MB / 410.7 MB
Notification: Performance of preOpt removeEqualRHS (simulation): time 0.001224/0.1448, allocations: 1.043 MB / 0.5469 GB, free: 7.422 MB / 410.7 MB
Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.005058/0.1499, allocations: 3.708 MB / 0.5505 GB, free: 3.656 MB / 410.7 MB
Notification: Performance of preOpt comSubExp (simulation): time 0.0009053/0.1508, allocations: 0.8915 MB / 0.5514 GB, free: 2.746 MB / 410.7 MB
Notification: Performance of preOpt resolveLoops (simulation): time 0.0005626/0.1514, allocations: 0.5888 MB / 0.552 GB, free: 2.152 MB / 410.7 MB
Notification: Performance of preOpt evalFunc (simulation): time 5.002e-05/0.1514, allocations: 13 kB / 0.552 GB, free: 2.141 MB / 410.7 MB
Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 2.354e-05/0.1514, allocations: 43.56 kB / 0.552 GB, free: 2.09 MB / 410.7 MB
Notification: Performance of pre-optimization done (n=98): time 3.186e-06/0.1514, allocations: 0 / 0.552 GB, free: 2.09 MB / 410.7 MB
Notification: Performance of matching and sorting (n=161): time 0.2245/0.3759, allocations: 15.31 MB / 0.567 GB, free: 43.7 MB / 410.7 MB
Notification: Performance of inlineWhenForInitialization (initialization): time 4.248e-05/0.3759, allocations: 102.4 kB / 0.5671 GB, free: 43.59 MB / 410.7 MB
Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.001755/0.3777, allocations: 1.686 MB / 0.5687 GB, free: 42.68 MB / 410.7 MB
Notification: Performance of collectPreVariables (initialization): time 0.0001579/0.3779, allocations: 57.23 kB / 0.5688 GB, free: 42.62 MB / 410.7 MB
Notification: Performance of collectInitialEqns (initialization): time 0.0003629/0.3782, allocations: 0.9101 MB / 0.5697 GB, free: 41.88 MB / 410.7 MB
Notification: Performance of collectInitialBindings (initialization): time 0.0003041/0.3785, allocations: 0.5608 MB / 0.5702 GB, free: 41.46 MB / 410.7 MB
Notification: Performance of simplifyInitialFunctions (initialization): time 0.0003713/0.3789, allocations: 348.8 kB / 0.5705 GB, free: 41.27 MB / 410.7 MB
Notification: Performance of setup shared object (initialization): time 2.97e-05/0.3789, allocations: 310 kB / 0.5708 GB, free: 40.96 MB / 410.7 MB
Notification: Performance of preBalanceInitialSystem (initialization): time 0.001161/0.3801, allocations: 1.065 MB / 0.5719 GB, free: 40.43 MB / 410.7 MB
Notification: Performance of partitionIndependentBlocks (initialization): time 0.001071/0.3812, allocations: 1.473 MB / 0.5733 GB, free: 39.39 MB / 410.7 MB
Notification: Performance of analyzeInitialSystem (initialization): time 0.002123/0.3833, allocations: 2.703 MB / 0.576 GB, free: 37.71 MB / 410.7 MB
Notification: Performance of solveInitialSystemEqSystem (initialization): time 8.055e-06/0.3833, allocations: 0 / 0.576 GB, free: 37.71 MB / 410.7 MB
Notification: Performance of matching and sorting (n=236) (initialization): time 0.009535/0.3928, allocations: 5.406 MB / 0.5812 GB, free: 32.47 MB / 410.7 MB
Notification: Performance of prepare postOptimizeDAE: time 2.858e-05/0.3929, allocations: 8 kB / 0.5812 GB, free: 32.46 MB / 410.7 MB
Notification: Performance of postOpt simplifyComplexFunction (initialization): time 1.861e-05/0.3929, allocations: 12.06 kB / 0.5813 GB, free: 32.45 MB / 410.7 MB
Notification: Performance of postOpt tearingSystem (initialization): time 0.009335/0.4022, allocations: 3.617 MB / 0.5848 GB, free: 28.86 MB / 410.7 MB
Notification: Performance of postOpt solveSimpleEquations (initialization): time 0.0006077/0.4028, allocations: 235.6 kB / 0.585 GB, free: 28.63 MB / 410.7 MB
Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 0.01948/0.4223, allocations: 19.89 MB / 0.6044 GB, free: 8.566 MB / 410.7 MB
Notification: Performance of postOpt simplifyAllExpressions (initialization): time 0.001426/0.4237, allocations: 98.19 kB / 0.6045 GB, free: 8.473 MB / 410.7 MB
Notification: Performance of postOpt collapseArrayExpressions (initialization): time 0.000101/0.4238, allocations: 72 kB / 0.6046 GB, free: 8.402 MB / 410.7 MB
Notification: Model statistics after passing the back-end for initialization:
 * Number of independent subsystems: 52
 * Number of states: 0 ()
 * Number of discrete variables: 0 ()
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for initialization (120):
 * Single equations (assignments): 118
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 0
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 2
 * Mixed (continuous/discrete) equation systems: 0
Notification: Torn system details for strict tearing set:
 * Linear torn systems (#iteration vars, #inner vars, density): 1 system
   {(3,56,100.0%)}
 * Non-linear torn systems (#iteration vars, #inner vars): 1 system
   {(10,49)}
Notification: Performance of prepare postOptimizeDAE: time 0.0005953/0.4244, allocations: 445.2 kB / 0.605 GB, free: 7.965 MB / 410.7 MB
Notification: Performance of postOpt lateInlineFunction (simulation): time 0.0002062/0.4246, allocations: 222.5 kB / 0.6052 GB, free: 7.75 MB / 410.7 MB
Notification: Performance of postOpt wrapFunctionCalls (simulation): time 0.000251/0.4249, allocations: 337.8 kB / 0.6056 GB, free: 7.418 MB / 410.7 MB
Notification: Performance of postOpt inlineArrayEqn (simulation): time 7.064e-06/0.4249, allocations: 20 kB / 0.6056 GB, free: 7.398 MB / 410.7 MB
Notification: Performance of postOpt constantLinearSystem (simulation): time 4.313e-05/0.4249, allocations: 8 kB / 0.6056 GB, free: 7.391 MB / 410.7 MB
Notification: Performance of postOpt simplifysemiLinear (simulation): time 8.366e-06/0.4249, allocations: 7.969 kB / 0.6056 GB, free: 7.383 MB / 410.7 MB
Notification: Performance of postOpt removeSimpleEquations (simulation): time 0.001547/0.4265, allocations: 1.646 MB / 0.6072 GB, free: 5.734 MB / 410.7 MB
Notification: Performance of postOpt simplifyComplexFunction (simulation): time 5.721e-06/0.4265, allocations: 0 / 0.6072 GB, free: 5.734 MB / 410.7 MB
Notification: Performance of postOpt solveSimpleEquations (simulation): time 0.0002358/0.4267, allocations: 95.88 kB / 0.6073 GB, free: 5.641 MB / 410.7 MB
Notification: Performance of postOpt tearingSystem (simulation): time 0.008958/0.4357, allocations: 3.45 MB / 0.6107 GB, free: 2.211 MB / 410.7 MB
Notification: Performance of postOpt inputDerivativesUsed (simulation): time 0.0001583/0.4358, allocations: 32 kB / 0.6107 GB, free: 2.18 MB / 410.7 MB
Notification: Performance of postOpt calculateStrongComponentJacobians (simulation): time 0.02342/0.4593, allocations: 19.92 MB / 0.6301 GB, free: 14.05 MB / 442.7 MB
Notification: Performance of postOpt calculateStateSetsJacobians (simulation): time 3.056e-06/0.4593, allocations: 4 kB / 0.6301 GB, free: 14.05 MB / 442.7 MB
Notification: Performance of postOpt symbolicJacobian (simulation): time 0.01212/0.4714, allocations: 6.84 MB / 0.6368 GB, free: 7.203 MB / 442.7 MB
Notification: Performance of postOpt removeConstants (simulation): time 0.001106/0.4725, allocations: 461.6 kB / 0.6373 GB, free: 6.75 MB / 442.7 MB
Notification: Performance of postOpt simplifyTimeIndepFuncCalls (simulation): time 0.0002173/0.4727, allocations: 28 kB / 0.6373 GB, free: 6.723 MB / 442.7 MB
Notification: Performance of postOpt simplifyAllExpressions (simulation): time 0.0009735/0.4737, allocations: 58.66 kB / 0.6374 GB, free: 6.668 MB / 442.7 MB
Notification: Performance of postOpt findZeroCrossings (simulation): time 0.0005094/0.4742, allocations: 153.9 kB / 0.6375 GB, free: 6.516 MB / 442.7 MB
Notification: Performance of postOpt collapseArrayExpressions (simulation): time 6.839e-05/0.4743, allocations: 43.98 kB / 0.6375 GB, free: 6.473 MB / 442.7 MB
Notification: Performance of sorting global known variables: time 0.001083/0.4753, allocations: 1.104 MB / 0.6386 GB, free: 5.348 MB / 442.7 MB
Notification: Performance of sort global known variables: time 2.41e-07/0.4753, allocations: 0 / 0.6386 GB, free: 5.348 MB / 442.7 MB
Notification: Performance of remove unused functions: time 0.001878/0.4772, allocations: 0.9147 MB / 0.6395 GB, free: 4.434 MB / 442.7 MB
Notification: Model statistics after passing the back-end for simulation:
 * Number of independent subsystems: 2
 * Number of states: 1 (hemoglobinConservationLaw.state[1])
 * Number of discrete variables: 0 ()
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for simulation (45):
 * Single equations (assignments): 43
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 0
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 2
 * Mixed (continuous/discrete) equation systems: 0
Notification: Torn system details for strict tearing set:
 * Linear torn systems (#iteration vars, #inner vars, density): 1 system
   {(6,53,86.1%)}
 * Non-linear torn systems (#iteration vars, #inner vars): 1 system
   {(10,49)}
Notification: Performance of Backend phase and start with SimCode phase: time 0.0001939/0.4774, allocations: 129.2 kB / 0.6396 GB, free: 4.301 MB / 442.7 MB
Notification: Performance of simCode: created initialization part: time 0.00576/0.4832, allocations: 3.719 MB / 0.6433 GB, free: 0.5664 MB / 442.7 MB
Notification: Performance of simCode: created event and clocks part: time 3.657e-06/0.4832, allocations: 3.938 kB / 0.6433 GB, free: 0.5625 MB / 442.7 MB
Notification: Performance of simCode: created simulation system equations: time 0.004022/0.4872, allocations: 2.488 MB / 0.6457 GB, free: 14.05 MB / 458.7 MB
Notification: Performance of simCode: created of all other equations (e.g. parameter, nominal, assert, etc): time 0.001374/0.4886, allocations: 369.1 kB / 0.6461 GB, free: 13.71 MB / 458.7 MB
Notification: Performance of simCode: created linear, non-linear and system jacobian parts: time 0.005356/0.4939, allocations: 3.994 MB / 0.65 GB, free: 9.699 MB / 458.7 MB
Notification: Performance of simCode: some other stuff during SimCode phase: time 0.0007915/0.4947, allocations: 1.004 MB / 0.6509 GB, free: 8.66 MB / 458.7 MB
Notification: Performance of simCode: all other stuff during SimCode phase: time 0.0002387/0.495, allocations: 91.42 kB / 0.651 GB, free: 8.57 MB / 458.7 MB
Notification: Performance of SimCode: time 7.42e-07/0.495, allocations: 0 / 0.651 GB, free: 8.57 MB / 458.7 MB
Notification: Performance of Templates: time 0.04145/0.5364, allocations: 43.8 MB / 0.6938 GB, free: 12.85 MB / 0.4948 GB
"
[Timeout remaining time 659]
make -j1 -f Bodylight_Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.makefile [Timeout 660]
(rm -f Bodylight_Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.pipe ; mkfifo Bodylight_Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.pipe ; head -c 1048576 < Bodylight_Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.pipe >> ../files/Bodylight_Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.sim & ./Bodylight_Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC > Bodylight_Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.pipe 2>&1) [Timeout 240]
[Calling sys.exit(0), Time elapsed: 7.994310365058482]