Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr Chemical_master_Chemical.Obsolete.Examples.Hemoglobin.Joels57.conf.json
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo): time 0.001349/0.001349, allocations: 110.1 kB / 19.7 MB, free: 2.262 MB / 14.72 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo): time 0.001479/0.001479, allocations: 217.9 kB / 23.01 MB, free: 5.113 MB / 14.72 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo): time 1.456/1.456, allocations: 230.6 MB / 256.8 MB, free: 8.02 MB / 206.1 MB
"
[Timeout remaining time 178]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/package.mo): time 0.1441/0.1441, allocations: 23.88 MB / 337.1 MB, free: 11.18 MB / 270.1 MB
"
[Timeout remaining time 180]
Using package Chemical with version 2.0.1 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/package.mo)
Using package Modelica with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo)
Using package Complex with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo)
Using package ModelicaServices with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo)
Running command: translateModel(Chemical.Obsolete.Examples.Hemoglobin.Joels57,tolerance=1e-05,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Chemical_master_Chemical.Obsolete.Examples.Hemoglobin.Joels57")
translateModel(Chemical.Obsolete.Examples.Hemoglobin.Joels57,tolerance=1e-05,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Chemical_master_Chemical.Obsolete.Examples.Hemoglobin.Joels57") [Timeout 660]
"Notification: Chemical requested package Modelica of version 4.0.0. Modelica 4.1.0 is used instead which states that it is fully compatible without conversion script needed.
Notification: Performance of FrontEnd - loaded program: time 0.002034/0.002034, allocations: 67.89 kB / 472.5 MB, free: 7.148 MB / 334.1 MB
Notification: Performance of FrontEnd - Absyn->SCode: time 0.3148/0.3169, allocations: 59.87 MB / 0.5199 GB, free: 9.816 MB / 382.1 MB
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Obsolete.mo:14335:7-14335:66:writable] Warning: An inner declaration for outer component system could not be found and was automatically generated.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Obsolete.mo:14335:7-14335:66:writable] Notification: The diagnostics message for the missing inner is: 
Your model is using an outer \"system\" component but
an inner \"system\" component is not defined.
For simulation drag Modelica.Fluid.System into your model
to specify system properties.
Notification: Performance of NFInst.instantiate(Chemical.Obsolete.Examples.Hemoglobin.Joels57): time 0.1005/0.4174, allocations: 83.69 MB / 0.6016 GB, free: 6.234 MB / 446.1 MB
Notification: Performance of NFInst.instExpressions: time 0.5913/1.009, allocations: 218.1 MB / 0.8146 GB, free: 15.96 MB / 0.5606 GB
Notification: Performance of NFInst.updateImplicitVariability: time 0.01508/1.024, allocations: 233.2 kB / 0.8149 GB, free: 15.96 MB / 0.5606 GB
Notification: Performance of NFTyping.typeComponents: time 0.01556/1.039, allocations: 4.907 MB / 0.8197 GB, free: 14.8 MB / 0.5606 GB
Notification: Performance of NFTyping.typeBindings: time 0.05218/1.092, allocations: 17.91 MB / 0.8371 GB, free: 7.336 MB / 0.5606 GB
Notification: Performance of NFTyping.typeClassSections: time 0.08212/1.174, allocations: 32.63 MB / 0.869 GB, free: 1.539 MB / 0.5762 GB
Notification: Performance of NFFlatten.flatten: time 0.1053/1.279, allocations: 89.2 MB / 0.9561 GB, free: 8.969 MB / 0.67 GB
Notification: Performance of NFFlatten.resolveConnections: time 0.8/2.079, allocations: 52.31 MB / 1.007 GB, free: 11.12 MB / 0.7013 GB
Notification: Performance of NFEvalConstants.evaluate: time 0.08162/2.161, allocations: 56.51 MB / 1.062 GB, free: 8.16 MB / 0.7013 GB
Notification: Performance of NFSimplifyModel.simplify: time 0.09714/2.258, allocations: 52.03 MB / 1.113 GB, free: 2.73 MB / 0.7013 GB
Notification: Performance of NFPackage.collectConstants: time 0.06155/2.319, allocations: 13.99 MB / 1.127 GB, free: 12.98 MB / 0.7169 GB
Notification: Performance of NFFlatten.collectFunctions: time 0.1239/2.443, allocations: 35.44 MB / 1.161 GB, free: 156 kB / 0.7325 GB
Notification: Performance of NFScalarize.scalarize: time 0.05085/2.494, allocations: 24.02 MB / 1.185 GB, free: 10.66 MB / 0.7638 GB
Notification: Performance of NFVerifyModel.verify: time 0.08506/2.579, allocations: 40.58 MB / 1.225 GB, free: 2.789 MB / 0.795 GB
Notification: Performance of NFConvertDAE.convert: time 0.8738/3.453, allocations: 159.5 MB / 1.38 GB, free: 146.3 MB / 0.8577 GB
Notification: Performance of FrontEnd - DAE generated: time 7.795e-06/3.453, allocations: 1.062 kB / 1.38 GB, free: 146.3 MB / 0.8577 GB
Notification: Performance of FrontEnd: time 1.843e-06/3.453, allocations: 0 / 1.38 GB, free: 146.3 MB / 0.8577 GB
Notification: Performance of Transformations before backend: time 0.0036/3.456, allocations: 0 / 1.38 GB, free: 146.3 MB / 0.8577 GB
Notification: Model statistics after passing the front-end and creating the data structures used by the back-end:
 * Number of equations: 11424
 * Number of variables: 11424
Notification: Performance of Generate backend data structure: time 0.2791/3.736, allocations: 71.73 MB / 1.45 GB, free: 114.3 MB / 0.8577 GB
Notification: Performance of prepare preOptimizeDAE: time 4.378e-05/3.736, allocations: 11.94 kB / 1.45 GB, free: 114.3 MB / 0.8577 GB
Notification: Performance of preOpt normalInlineFunction (simulation): time 0.08843/3.824, allocations: 11.94 MB / 1.462 GB, free: 109.6 MB / 0.8577 GB
Notification: Performance of preOpt evaluateParameters (simulation): time 0.1097/3.934, allocations: 42.63 MB / 1.504 GB, free: 82.69 MB / 0.8577 GB
Notification: Performance of preOpt simplifyIfEquations (simulation): time 0.006637/3.94, allocations: 9.237 MB / 1.513 GB, free: 72.12 MB / 0.8577 GB
Notification: Performance of preOpt expandDerOperator (simulation): time 0.04081/3.981, allocations: 4.596 MB / 1.517 GB, free: 67.52 MB / 0.8577 GB
Notification: Performance of preOpt clockPartitioning (simulation): time 0.639/4.62, allocations: 112.9 MB / 1.627 GB, free: 282.3 MB / 0.8733 GB
Notification: Performance of preOpt findStateOrder (simulation): time 0.002796/4.623, allocations: 27.06 kB / 1.627 GB, free: 282.3 MB / 0.8733 GB
Notification: Performance of preOpt replaceEdgeChange (simulation): time 0.03527/4.658, allocations: 1.759 MB / 1.629 GB, free: 282.3 MB / 0.8733 GB
Notification: Performance of preOpt inlineArrayEqn (simulation): time 0.001342/4.66, allocations: 1.058 MB / 1.63 GB, free: 282.3 MB / 0.8733 GB
Notification: Performance of preOpt removeEqualRHS (simulation): time 0.2947/4.954, allocations: 153.9 MB / 1.781 GB, free: 197.3 MB / 0.8733 GB
Warning: The model contains alias variables with redundant start and/or conflicting nominal values. It is recommended to resolve the conflicts, because otherwise the system could be hard to solve. To print the conflicting alias sets and the chosen candidates please use -d=aliasConflicts.
Notification: Performance of preOpt removeSimpleEquations (simulation): time 1.297/6.251, allocations: 438.7 MB / 2.209 GB, free: 137.7 MB / 0.8733 GB
Notification: Performance of preOpt comSubExp (simulation): time 2.642/8.894, allocations: 0.6704 GB / 2.879 GB, free: 202.1 MB / 0.8733 GB
Notification: Performance of preOpt resolveLoops (simulation): time 0.1115/9.005, allocations: 60.08 MB / 2.938 GB, free: 157 MB / 0.8733 GB
Notification: Performance of preOpt evalFunc (simulation): time 0.9769/9.982, allocations: 270 MB / 3.202 GB, free: 219.5 MB / 0.8733 GB
Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 0.0002557/9.982, allocations: 342.5 kB / 3.202 GB, free: 219.2 MB / 0.8733 GB
Notification: Performance of preOpt simplifyInStream (simulation): time 0.09788/10.08, allocations: 29.34 MB / 3.231 GB, free: 208.6 MB / 0.8733 GB
Notification: Performance of pre-optimization done (n=2985): time 0.0001957/10.08, allocations: 2.531 kB / 3.231 GB, free: 208.6 MB / 0.8733 GB
Notification: Performance of matching and sorting (n=3387): time 2.363/12.44, allocations: 423.8 MB / 3.645 GB, free: 135.2 MB / 0.8733 GB
Notification: Performance of inlineWhenForInitialization (initialization): time 0.0002328/12.44, allocations: 449.3 kB / 3.645 GB, free: 134.7 MB / 0.8733 GB
Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.06226/12.51, allocations: 32.26 MB / 3.676 GB, free: 102.9 MB / 0.8733 GB
Notification: Performance of collectPreVariables (initialization): time 0.0144/12.52, allocations: 0.5681 MB / 3.677 GB, free: 102.4 MB / 0.8733 GB
Notification: Performance of collectInitialEqns (initialization): time 0.01619/12.54, allocations: 21.73 MB / 3.698 GB, free: 80.68 MB / 0.8733 GB
Notification: Performance of collectInitialBindings (initialization): time 0.02313/12.56, allocations: 12.42 MB / 3.71 GB, free: 68.42 MB / 0.8733 GB
Notification: Performance of simplifyInitialFunctions (initialization): time 0.0538/12.61, allocations: 9.926 MB / 3.72 GB, free: 58.47 MB / 0.8733 GB
Notification: Performance of setup shared object (initialization): time 4.613e-05/12.61, allocations: 309.1 kB / 3.72 GB, free: 58.17 MB / 0.8733 GB
Notification: Performance of preBalanceInitialSystem (initialization): time 0.4503/13.06, allocations: 39.05 MB / 3.758 GB, free: 244.1 MB / 0.8733 GB
Notification: Performance of partitionIndependentBlocks (initialization): time 0.0854/13.15, allocations: 53.24 MB / 3.81 GB, free: 221.5 MB / 0.8733 GB
Notification: Performance of analyzeInitialSystem (initialization): time 0.1575/13.31, allocations: 96.37 MB / 3.905 GB, free: 167 MB / 0.8733 GB
Notification: Performance of solveInitialSystemEqSystem (initialization): time 0.0008773/13.31, allocations: 128.2 kB / 3.905 GB, free: 167 MB / 0.8733 GB
Notification: Performance of matching and sorting (n=5667) (initialization): time 1.708/15.02, allocations: 257.3 MB / 4.156 GB, free: 200.9 MB / 0.8733 GB
Notification: Performance of prepare postOptimizeDAE: time 0.0005389/15.02, allocations: 197.5 kB / 4.156 GB, free: 200.9 MB / 0.8733 GB
Notification: Performance of postOpt simplifyComplexFunction (initialization): time 0.0008593/15.02, allocations: 443.5 kB / 4.157 GB, free: 200.9 MB / 0.8733 GB
Notification: Performance of postOpt tearingSystem (initialization): time 0.1737/15.19, allocations: 73.72 MB / 4.229 GB, free: 166.9 MB / 0.8733 GB
Notification: Performance of postOpt solveSimpleEquations (initialization): time 0.05147/15.24, allocations: 11.18 MB / 4.239 GB, free: 163 MB / 0.8733 GB
Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 1.034/16.28, allocations: 314.2 MB / 4.546 GB, free: 156.9 MB / 0.8733 GB
Notification: Performance of postOpt simplifyAllExpressions (initialization): time 0.05527/16.33, allocations: 2.475 MB / 4.549 GB, free: 156.2 MB / 0.8733 GB
Notification: Performance of postOpt collapseArrayExpressions (initialization): time 0.01684/16.35, allocations: 2.804 MB / 4.551 GB, free: 155.8 MB / 0.8733 GB
Notification: Model statistics after passing the back-end for initialization:
 * Number of independent subsystems: 2031
 * Number of states: 0 ()
 * Number of discrete variables: 0 ()
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for initialization (5523):
 * Single equations (assignments): 5514
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 0
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 9
 * Mixed (continuous/discrete) equation systems: 0
Notification: Torn system details for strict tearing set:
 * Linear torn systems (#iteration vars, #inner vars, density): 6 systems
   {(1,3,100.0%), (33,10,82.4%), (1,3,100.0%), (33,10,82.4%), (1,3,100.0%), (33,10,82.4%)}
 * Non-linear torn systems (#iteration vars, #inner vars): 3 systems
   {(1,3), (1,3), (1,3)}
Notification: Performance of prepare postOptimizeDAE: time 0.05113/16.4, allocations: 18.34 MB / 4.569 GB, free: 145 MB / 0.8733 GB
Notification: Performance of postOpt lateInlineFunction (simulation): time 0.02187/16.42, allocations: 3.318 MB / 4.573 GB, free: 145 MB / 0.8733 GB
Notification: Performance of postOpt wrapFunctionCalls (simulation): time 1.146/17.57, allocations: 152.4 MB / 4.722 GB, free: 187.9 MB / 0.8733 GB
Notification: Performance of postOpt inlineArrayEqn (simulation): time 0.0003725/17.57, allocations: 358.6 kB / 4.722 GB, free: 187.9 MB / 0.8733 GB
Notification: Performance of postOpt constantLinearSystem (simulation): time 0.0004189/17.57, allocations: 56.06 kB / 4.722 GB, free: 187.9 MB / 0.8733 GB
Notification: Performance of postOpt simplifysemiLinear (simulation): time 0.001103/17.57, allocations: 182.8 kB / 4.722 GB, free: 187.9 MB / 0.8733 GB
Notification: Performance of postOpt removeSimpleEquations (simulation): time 0.8849/18.45, allocations: 239 MB / 4.955 GB, free: 83.93 MB / 0.8733 GB
Notification: Performance of postOpt simplifyComplexFunction (simulation): time 0.0003227/18.45, allocations: 8 kB / 4.955 GB, free: 83.93 MB / 0.8733 GB
Notification: Performance of postOpt solveSimpleEquations (simulation): time 0.03883/18.49, allocations: 7.253 MB / 4.963 GB, free: 76.66 MB / 0.8733 GB
Notification: Performance of postOpt tearingSystem (simulation): time 0.08746/18.58, allocations: 39.76 MB / 5.001 GB, free: 37.16 MB / 0.8733 GB
Notification: Performance of postOpt inputDerivativesUsed (simulation): time 0.01142/18.59, allocations: 1.448 MB / 5.003 GB, free: 35.71 MB / 0.8733 GB
Notification: Performance of postOpt calculateStrongComponentJacobians (simulation): time 0.6607/19.25, allocations: 158.7 MB / 5.158 GB, free: 170.5 MB / 0.8733 GB
Notification: Performance of postOpt calculateStateSetsJacobians (simulation): time 8.296e-06/19.25, allocations: 16.59 kB / 5.158 GB, free: 170.5 MB / 0.8733 GB
Notification: Performance of postOpt symbolicJacobian (simulation): time 1.127/20.38, allocations: 200.4 MB / 5.353 GB, free: 175.6 MB / 0.8733 GB
Notification: Performance of postOpt removeConstants (simulation): time 0.03195/20.41, allocations: 11.55 MB / 5.365 GB, free: 175.6 MB / 0.8733 GB
Notification: Performance of postOpt simplifyTimeIndepFuncCalls (simulation): time 0.01515/20.43, allocations: 0.9153 MB / 5.366 GB, free: 175.6 MB / 0.8733 GB
Notification: Performance of postOpt simplifyAllExpressions (simulation): time 0.03553/20.46, allocations: 1.547 MB / 5.367 GB, free: 175.6 MB / 0.8733 GB
Notification: Performance of postOpt findZeroCrossings (simulation): time 0.0202/20.48, allocations: 4.686 MB / 5.372 GB, free: 175.5 MB / 0.8733 GB
Notification: Performance of postOpt collapseArrayExpressions (simulation): time 0.008918/20.49, allocations: 1.381 MB / 5.373 GB, free: 175.5 MB / 0.8733 GB
Notification: Performance of sorting global known variables: time 0.03579/20.53, allocations: 22.47 MB / 5.395 GB, free: 174.8 MB / 0.8733 GB
Notification: Performance of sort global known variables: time 2.41e-07/20.53, allocations: 0 / 5.395 GB, free: 174.8 MB / 0.8733 GB
Notification: Performance of remove unused functions: time 0.07966/20.61, allocations: 20.24 MB / 5.415 GB, free: 173.3 MB / 0.8733 GB
Notification: Model statistics after passing the back-end for simulation:
 * Number of independent subsystems: 45
 * Number of states: 180 (pCO2_2000.solution.temperature,pCO2_2000.O2_free.logn,pCO2_2000.H2O.logn,pCO2_2000.relaxed.OxyHm[1].logn,pCO2_2000.relaxed.OxyHm[2].logn,pCO2_2000.relaxed.OxyHm[3].logn,pCO2_2000.relaxed.OxyHm[4].logn,pCO2_2000.relaxed.DeoxyHm[1].logn,pCO2_2000.relaxed.DeoxyHm[2].logn,pCO2_2000.relaxed.DeoxyHm[3].logn,pCO2_2000.relaxed.DeoxyHm[4].logn,pCO2_2000.relaxed.HmAH[1].logn,pCO2_2000.relaxed.HmAH[2].logn,pCO2_2000.relaxed.HmAH[3].logn,pCO2_2000.relaxed.HmAH[4].logn,pCO2_2000.relaxed.HmA[1].logn,pCO2_2000.relaxed.HmA[2].logn,pCO2_2000.relaxed.HmA[3].logn,pCO2_2000.relaxed.HmA[4].logn,pCO2_2000.relaxed.HmNH3[1].logn,pCO2_2000.relaxed.HmNH3[2].logn,pCO2_2000.relaxed.HmNH3[3].logn,pCO2_2000.relaxed.HmNH3[4].logn,pCO2_2000.relaxed.HmNH2[1].logn,pCO2_2000.relaxed.HmNH2[2].logn,pCO2_2000.relaxed.HmNH2[3].logn,pCO2_2000.relaxed.HmNH2[4].logn,pCO2_2000.relaxed.HmNHCOO[1].logn,pCO2_2000.relaxed.HmNHCOO[2].logn,pCO2_2000.relaxed.HmNHCOO[3].logn,pCO2_2000.relaxed.HmNHCOO[4].logn,pCO2_2000.tensed.OxyHm[1].logn,pCO2_2000.tensed.OxyHm[2].logn,pCO2_2000.tensed.OxyHm[3].logn,pCO2_2000.tensed.OxyHm[4].logn,pCO2_2000.tensed.DeoxyHm[1].logn,pCO2_2000.tensed.DeoxyHm[2].logn,pCO2_2000.tensed.DeoxyHm[3].logn,pCO2_2000.tensed.DeoxyHm[4].logn,pCO2_2000.tensed.HmAH[1].logn,pCO2_2000.tensed.HmAH[2].logn,pCO2_2000.tensed.HmAH[3].logn,pCO2_2000.tensed.HmAH[4].logn,pCO2_2000.tensed.HmA[1].logn,pCO2_2000.tensed.HmA[2].logn,pCO2_2000.tensed.HmA[3].logn,pCO2_2000.tensed.HmA[4].logn,pCO2_2000.tensed.HmNH3[1].logn,pCO2_2000.tensed.HmNH3[2].logn,pCO2_2000.tensed.HmNH3[3].logn,pCO2_2000.tensed.HmNH3[4].logn,pCO2_2000.tensed.HmNH2[1].logn,pCO2_2000.tensed.HmNH2[2].logn,pCO2_2000.tensed.HmNH2[3].logn,pCO2_2000.tensed.HmNH2[4].logn,pCO2_2000.tensed.HmNHCOO[1].logn,pCO2_2000.tensed.HmNHCOO[2].logn,pCO2_2000.tensed.HmNHCOO[3].logn,pCO2_2000.tensed.HmNHCOO[4].logn,pCO2_2000.CO2_free.logn,pCO2_5330.solution.temperature,pCO2_5330.O2_free.logn,pCO2_5330.H2O.logn,pCO2_5330.relaxed.OxyHm[1].logn,pCO2_5330.relaxed.OxyHm[2].logn,pCO2_5330.relaxed.OxyHm[3].logn,pCO2_5330.relaxed.OxyHm[4].logn,pCO2_5330.relaxed.DeoxyHm[1].logn,pCO2_5330.relaxed.DeoxyHm[2].logn,pCO2_5330.relaxed.DeoxyHm[3].logn,pCO2_5330.relaxed.DeoxyHm[4].logn,pCO2_5330.relaxed.HmAH[1].logn,pCO2_5330.relaxed.HmAH[2].logn,pCO2_5330.relaxed.HmAH[3].logn,pCO2_5330.relaxed.HmAH[4].logn,pCO2_5330.relaxed.HmA[1].logn,pCO2_5330.relaxed.HmA[2].logn,pCO2_5330.relaxed.HmA[3].logn,pCO2_5330.relaxed.HmA[4].logn,pCO2_5330.relaxed.HmNH3[1].logn,pCO2_5330.relaxed.HmNH3[2].logn,pCO2_5330.relaxed.HmNH3[3].logn,pCO2_5330.relaxed.HmNH3[4].logn,pCO2_5330.relaxed.HmNH2[1].logn,pCO2_5330.relaxed.HmNH2[2].logn,pCO2_5330.relaxed.HmNH2[3].logn,pCO2_5330.relaxed.HmNH2[4].logn,pCO2_5330.relaxed.HmNHCOO[1].logn,pCO2_5330.relaxed.HmNHCOO[2].logn,pCO2_5330.relaxed.HmNHCOO[3].logn,pCO2_5330.relaxed.HmNHCOO[4].logn,pCO2_5330.tensed.OxyHm[1].logn,pCO2_5330.tensed.OxyHm[2].logn,pCO2_5330.tensed.OxyHm[3].logn,pCO2_5330.tensed.OxyHm[4].logn,pCO2_5330.tensed.DeoxyHm[1].logn,pCO2_5330.tensed.DeoxyHm[2].logn,pCO2_5330.tensed.DeoxyHm[3].logn,pCO2_5330.tensed.DeoxyHm[4].logn,pCO2_5330.tensed.HmAH[1].logn,pCO2_5330.tensed.HmAH[2].logn,pCO2_5330.tensed.HmAH[3].logn,pCO2_5330.tensed.HmAH[4].logn,pCO2_5330.tensed.HmA[1].logn,pCO2_5330.tensed.HmA[2].logn,pCO2_5330.tensed.HmA[3].logn,pCO2_5330.tensed.HmA[4].logn,pCO2_5330.tensed.HmNH3[1].logn,pCO2_5330.tensed.HmNH3[2].logn,pCO2_5330.tensed.HmNH3[3].logn,pCO2_5330.tensed.HmNH3[4].logn,pCO2_5330.tensed.HmNH2[1].logn,pCO2_5330.tensed.HmNH2[2].logn,pCO2_5330.tensed.HmNH2[3].logn,pCO2_5330.tensed.HmNH2[4].logn,pCO2_5330.tensed.HmNHCOO[1].logn,pCO2_5330.tensed.HmNHCOO[2].logn,pCO2_5330.tensed.HmNHCOO[3].logn,pCO2_5330.tensed.HmNHCOO[4].logn,pCO2_5330.CO2_free.logn,pCO2_9330.solution.temperature,pCO2_9330.O2_free.logn,pCO2_9330.H2O.logn,pCO2_9330.relaxed.OxyHm[1].logn,pCO2_9330.relaxed.OxyHm[2].logn,pCO2_9330.relaxed.OxyHm[3].logn,pCO2_9330.relaxed.OxyHm[4].logn,pCO2_9330.relaxed.DeoxyHm[1].logn,pCO2_9330.relaxed.DeoxyHm[2].logn,pCO2_9330.relaxed.DeoxyHm[3].logn,pCO2_9330.relaxed.DeoxyHm[4].logn,pCO2_9330.relaxed.HmAH[1].logn,pCO2_9330.relaxed.HmAH[2].logn,pCO2_9330.relaxed.HmAH[3].logn,pCO2_9330.relaxed.HmAH[4].logn,pCO2_9330.relaxed.HmA[1].logn,pCO2_9330.relaxed.HmA[2].logn,pCO2_9330.relaxed.HmA[3].logn,pCO2_9330.relaxed.HmA[4].logn,pCO2_9330.relaxed.HmNH3[1].logn,pCO2_9330.relaxed.HmNH3[2].logn,pCO2_9330.relaxed.HmNH3[3].logn,pCO2_9330.relaxed.HmNH3[4].logn,pCO2_9330.relaxed.HmNH2[1].logn,pCO2_9330.relaxed.HmNH2[2].logn,pCO2_9330.relaxed.HmNH2[3].logn,pCO2_9330.relaxed.HmNH2[4].logn,pCO2_9330.relaxed.HmNHCOO[1].logn,pCO2_9330.relaxed.HmNHCOO[2].logn,pCO2_9330.relaxed.HmNHCOO[3].logn,pCO2_9330.relaxed.HmNHCOO[4].logn,pCO2_9330.tensed.OxyHm[1].logn,pCO2_9330.tensed.OxyHm[2].logn,pCO2_9330.tensed.OxyHm[3].logn,pCO2_9330.tensed.OxyHm[4].logn,pCO2_9330.tensed.DeoxyHm[1].logn,pCO2_9330.tensed.DeoxyHm[2].logn,pCO2_9330.tensed.DeoxyHm[3].logn,pCO2_9330.tensed.DeoxyHm[4].logn,pCO2_9330.tensed.HmAH[1].logn,pCO2_9330.tensed.HmAH[2].logn,pCO2_9330.tensed.HmAH[3].logn,pCO2_9330.tensed.HmAH[4].logn,pCO2_9330.tensed.HmA[1].logn,pCO2_9330.tensed.HmA[2].logn,pCO2_9330.tensed.HmA[3].logn,pCO2_9330.tensed.HmA[4].logn,pCO2_9330.tensed.HmNH3[1].logn,pCO2_9330.tensed.HmNH3[2].logn,pCO2_9330.tensed.HmNH3[3].logn,pCO2_9330.tensed.HmNH3[4].logn,pCO2_9330.tensed.HmNH2[1].logn,pCO2_9330.tensed.HmNH2[2].logn,pCO2_9330.tensed.HmNH2[3].logn,pCO2_9330.tensed.HmNH2[4].logn,pCO2_9330.tensed.HmNHCOO[1].logn,pCO2_9330.tensed.HmNHCOO[2].logn,pCO2_9330.tensed.HmNHCOO[3].logn,pCO2_9330.tensed.HmNHCOO[4].logn,pCO2_9330.CO2_free.logn)
 * Number of discrete variables: 0 ()
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for simulation (3702):
 * Single equations (assignments): 3693
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 0
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 9
 * Mixed (continuous/discrete) equation systems: 0
Notification: Torn system details for strict tearing set:
 * Linear torn systems (#iteration vars, #inner vars, density): 6 systems
   {(1,3,100.0%), (33,10,82.4%), (1,3,100.0%), (33,10,82.4%), (1,3,100.0%), (33,10,82.4%)}
 * Non-linear torn systems (#iteration vars, #inner vars): 3 systems
   {(1,3), (1,3), (1,3)}
Notification: Performance of Backend phase and start with SimCode phase: time 0.02602/20.63, allocations: 10.82 MB / 5.425 GB, free: 171.2 MB / 0.8733 GB
Notification: Performance of simCode: created initialization part: time 0.1774/20.81, allocations: 85.28 MB / 5.509 GB, free: 137.9 MB / 0.8733 GB
Notification: Performance of simCode: created event and clocks part: time 1.212e-05/20.81, allocations: 4 kB / 5.509 GB, free: 137.9 MB / 0.8733 GB
Notification: Performance of simCode: created simulation system equations: time 0.1167/20.93, allocations: 54.51 MB / 5.562 GB, free: 92.67 MB / 0.8733 GB
Notification: Performance of simCode: created of all other equations (e.g. parameter, nominal, assert, etc): time 0.05303/20.98, allocations: 7.825 MB / 5.57 GB, free: 86.43 MB / 0.8733 GB
Notification: Performance of simCode: created linear, non-linear and system jacobian parts: time 0.5886/21.57, allocations: 122.2 MB / 5.689 GB, free: 178.2 MB / 0.8733 GB
Notification: Performance of simCode: some other stuff during SimCode phase: time 0.05271/21.62, allocations: 29.68 MB / 5.718 GB, free: 176.1 MB / 0.8733 GB
Notification: Performance of simCode: all other stuff during SimCode phase: time 0.02587/21.65, allocations: 4.687 MB / 5.722 GB, free: 176.1 MB / 0.8733 GB
Notification: Performance of SimCode: time 1.423e-06/21.65, allocations: 0 / 5.722 GB, free: 176.1 MB / 0.8733 GB
Notification: Performance of Templates: time 6.007/27.65, allocations: 3.299 GB / 9.021 GB, free: 101.1 MB / 0.967 GB
"
[Timeout remaining time 632]
make -j1 -f Chemical_master_Chemical.Obsolete.Examples.Hemoglobin.Joels57.makefile [Timeout 660]
(rm -f Chemical_master_Chemical.Obsolete.Examples.Hemoglobin.Joels57.pipe ; mkfifo Chemical_master_Chemical.Obsolete.Examples.Hemoglobin.Joels57.pipe ; head -c 1048576 < Chemical_master_Chemical.Obsolete.Examples.Hemoglobin.Joels57.pipe >> ../files/Chemical_master_Chemical.Obsolete.Examples.Hemoglobin.Joels57.sim & ./Chemical_master_Chemical.Obsolete.Examples.Hemoglobin.Joels57  -abortSlowSimulation -alarm=480 -lv LOG_STATS > Chemical_master_Chemical.Obsolete.Examples.Hemoglobin.Joels57.pipe 2>&1) [Timeout 480]
[Calling sys.exit(0), Time elapsed: 78.37573128199438]
Failed to read output from testmodel.py, exit status != 0:
27.664718236017507 27.672087842 24.216717826
Calling exit ...
<OMPython.OMCSessionZMQ object at 0x7f4d091caf50>