Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr Chemical_Chemical.Obsolete.Examples.Hemoglobin.HemoglobinCarboxylation.conf.json loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo): time 0.00142/0.00142, allocations: 105.8 kB / 19.69 MB, free: 2.258 MB / 14.72 MB " [Timeout remaining time 180] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo): time 0.001511/0.001511, allocations: 212.3 kB / 23 MB, free: 5.113 MB / 14.72 MB " [Timeout remaining time 180] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo): time 1.436/1.436, allocations: 230.6 MB / 256.8 MB, free: 8.016 MB / 206.1 MB " [Timeout remaining time 178] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/package.mo): time 0.1353/0.1353, allocations: 23.86 MB / 337 MB, free: 11.29 MB / 270.1 MB " [Timeout remaining time 180] Using package Chemical with version 2.0.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/package.mo) Using package Modelica with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo) Using package Complex with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo) Using package ModelicaServices with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo) Running command: translateModel(Chemical.Obsolete.Examples.Hemoglobin.HemoglobinCarboxylation,tolerance=1e-05,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Chemical_Chemical.Obsolete.Examples.Hemoglobin.HemoglobinCarboxylation") translateModel(Chemical.Obsolete.Examples.Hemoglobin.HemoglobinCarboxylation,tolerance=1e-05,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Chemical_Chemical.Obsolete.Examples.Hemoglobin.HemoglobinCarboxylation") [Timeout 660] "Notification: Chemical requested package Modelica of version 4.0.0. Modelica 4.1.0 is used instead which states that it is fully compatible without conversion script needed. Notification: Performance of FrontEnd - loaded program: time 0.002127/0.002127, allocations: 63.91 kB / 472.5 MB, free: 7.18 MB / 334.1 MB Notification: Performance of FrontEnd - Absyn->SCode: time 0.3465/0.3486, allocations: 59.86 MB / 0.5198 GB, free: 9.844 MB / 382.1 MB [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/Obsolete.mo:14337:7-14337:66:writable] Warning: An inner declaration for outer component system could not be found and was automatically generated. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/Obsolete.mo:14337:7-14337:66:writable] Notification: The diagnostics message for the missing inner is: Your model is using an outer \"system\" component but an inner \"system\" component is not defined. For simulation drag Modelica.Fluid.System into your model to specify system properties. Notification: Performance of NFInst.instantiate(Chemical.Obsolete.Examples.Hemoglobin.HemoglobinCarboxylation): time 0.05388/0.4025, allocations: 43.03 MB / 0.5619 GB, free: 13.98 MB / 414.1 MB Notification: Performance of NFInst.instExpressions: time 0.09762/0.5001, allocations: 73.19 MB / 0.6333 GB, free: 5.613 MB / 478.1 MB Notification: Performance of NFInst.updateImplicitVariability: time 0.004556/0.5047, allocations: 83.31 kB / 0.6334 GB, free: 5.531 MB / 478.1 MB Notification: Performance of NFTyping.typeComponents: time 0.005393/0.5101, allocations: 1.625 MB / 0.635 GB, free: 3.895 MB / 478.1 MB Notification: Performance of NFTyping.typeBindings: time 0.01918/0.5293, allocations: 6.025 MB / 0.6409 GB, free: 13.82 MB / 494.1 MB Notification: Performance of NFTyping.typeClassSections: time 0.02931/0.5586, allocations: 10.38 MB / 0.651 GB, free: 3.387 MB / 494.1 MB Notification: Performance of NFFlatten.flatten: time 0.03263/0.5912, allocations: 26.69 MB / 0.6771 GB, free: 8.605 MB / 0.5137 GB Notification: Performance of NFFlatten.resolveConnections: time 0.0225/0.6137, allocations: 16.28 MB / 0.693 GB, free: 8.211 MB / 0.5294 GB Notification: Performance of NFEvalConstants.evaluate: time 0.02888/0.6426, allocations: 17.8 MB / 0.7104 GB, free: 6.375 MB / 0.545 GB Notification: Performance of NFSimplifyModel.simplify: time 0.03108/0.6737, allocations: 16.72 MB / 0.7267 GB, free: 5.605 MB / 0.5606 GB Notification: Performance of NFPackage.collectConstants: time 0.01043/0.6841, allocations: 3.137 MB / 0.7298 GB, free: 2.469 MB / 0.5606 GB Notification: Performance of NFFlatten.collectFunctions: time 0.4996/1.184, allocations: 10.83 MB / 0.7403 GB, free: 47.15 MB / 0.5607 GB Notification: Performance of NFScalarize.scalarize: time 0.01229/1.196, allocations: 7.072 MB / 0.7472 GB, free: 47.15 MB / 0.5607 GB Notification: Performance of NFVerifyModel.verify: time 0.02546/1.221, allocations: 12.24 MB / 0.7592 GB, free: 46.12 MB / 0.5607 GB Notification: Performance of NFConvertDAE.convert: time 0.06263/1.284, allocations: 44.85 MB / 0.803 GB, free: 37 MB / 0.5607 GB Notification: Performance of FrontEnd - DAE generated: time 6.963e-06/1.284, allocations: 0 / 0.803 GB, free: 37 MB / 0.5607 GB Notification: Performance of FrontEnd: time 1.373e-06/1.284, allocations: 0 / 0.803 GB, free: 37 MB / 0.5607 GB Notification: Performance of Transformations before backend: time 0.0011/1.285, allocations: 7.766 kB / 0.803 GB, free: 37 MB / 0.5607 GB Notification: Model statistics after passing the front-end and creating the data structures used by the back-end: * Number of equations: 3808 * Number of variables: 3808 Notification: Performance of Generate backend data structure: time 0.07943/1.365, allocations: 23.67 MB / 0.8261 GB, free: 23.27 MB / 0.5607 GB Notification: Performance of prepare preOptimizeDAE: time 4.098e-05/1.365, allocations: 14.47 kB / 0.8261 GB, free: 23.27 MB / 0.5607 GB Notification: Performance of preOpt normalInlineFunction (simulation): time 0.02577/1.39, allocations: 3.978 MB / 0.83 GB, free: 21.48 MB / 0.5607 GB Notification: Performance of preOpt evaluateParameters (simulation): time 0.02854/1.419, allocations: 12.62 MB / 0.8424 GB, free: 14.89 MB / 0.5607 GB Notification: Performance of preOpt simplifyIfEquations (simulation): time 0.002034/1.421, allocations: 3.07 MB / 0.8454 GB, free: 11.97 MB / 0.5607 GB Notification: Performance of preOpt expandDerOperator (simulation): time 0.01128/1.432, allocations: 1.531 MB / 0.8468 GB, free: 10.44 MB / 0.5607 GB Notification: Performance of preOpt clockPartitioning (simulation): time 0.09397/1.526, allocations: 35.26 MB / 0.8813 GB, free: 6.969 MB / 0.5919 GB Notification: Performance of preOpt findStateOrder (simulation): time 0.0005889/1.527, allocations: 7.375 kB / 0.8813 GB, free: 6.965 MB / 0.5919 GB Notification: Performance of preOpt replaceEdgeChange (simulation): time 0.01/1.537, allocations: 0.5859 MB / 0.8819 GB, free: 6.379 MB / 0.5919 GB Notification: Performance of preOpt inlineArrayEqn (simulation): time 0.0003449/1.537, allocations: 360 kB / 0.8822 GB, free: 6.027 MB / 0.5919 GB Notification: Performance of preOpt removeEqualRHS (simulation): time 0.1026/1.64, allocations: 47.76 MB / 0.9288 GB, free: 6.27 MB / 0.6388 GB Warning: The model contains alias variables with redundant start and/or conflicting nominal values. It is recommended to resolve the conflicts, because otherwise the system could be hard to solve. To print the conflicting alias sets and the chosen candidates please use -d=aliasConflicts. Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.5752/2.215, allocations: 131.3 MB / 1.057 GB, free: 149.1 MB / 0.6857 GB Notification: Performance of preOpt comSubExp (simulation): time 0.8304/3.045, allocations: 226.3 MB / 1.278 GB, free: 246.9 MB / 0.7013 GB Notification: Performance of preOpt resolveLoops (simulation): time 0.03178/3.077, allocations: 18.5 MB / 1.296 GB, free: 244.7 MB / 0.7013 GB Notification: Performance of preOpt evalFunc (simulation): time 0.1491/3.226, allocations: 80.48 MB / 1.375 GB, free: 183.7 MB / 0.7013 GB Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 0.000112/3.226, allocations: 138.3 kB / 1.375 GB, free: 183.6 MB / 0.7013 GB Notification: Performance of preOpt simplifyInStream (simulation): time 0.02719/3.254, allocations: 6.351 MB / 1.381 GB, free: 177.8 MB / 0.7013 GB Notification: Performance of pre-optimization done (n=995): time 4.622e-05/3.254, allocations: 2.656 kB / 1.381 GB, free: 177.8 MB / 0.7013 GB Notification: Performance of matching and sorting (n=1129): time 0.6666/3.92, allocations: 135.7 MB / 1.514 GB, free: 42.75 MB / 0.7013 GB Notification: Performance of inlineWhenForInitialization (initialization): time 7.799e-05/3.92, allocations: 164.2 kB / 1.514 GB, free: 42.57 MB / 0.7013 GB Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.01283/3.933, allocations: 10.2 MB / 1.524 GB, free: 32.43 MB / 0.7013 GB Notification: Performance of collectPreVariables (initialization): time 0.006094/3.939, allocations: 209.7 kB / 1.524 GB, free: 32.22 MB / 0.7013 GB Notification: Performance of collectInitialEqns (initialization): time 0.005014/3.944, allocations: 7.094 MB / 1.531 GB, free: 25.13 MB / 0.7013 GB Notification: Performance of collectInitialBindings (initialization): time 0.007414/3.952, allocations: 4.11 MB / 1.535 GB, free: 21.07 MB / 0.7013 GB Notification: Performance of simplifyInitialFunctions (initialization): time 0.01552/3.967, allocations: 3.273 MB / 1.538 GB, free: 17.79 MB / 0.7013 GB Notification: Performance of setup shared object (initialization): time 4.559e-05/3.967, allocations: 305.1 kB / 1.538 GB, free: 17.49 MB / 0.7013 GB Notification: Performance of preBalanceInitialSystem (initialization): time 0.2973/4.264, allocations: 11.84 MB / 1.55 GB, free: 241.1 MB / 0.7013 GB Notification: Performance of partitionIndependentBlocks (initialization): time 0.02458/4.289, allocations: 16.57 MB / 1.566 GB, free: 234.6 MB / 0.7013 GB Notification: Performance of analyzeInitialSystem (initialization): time 0.0447/4.334, allocations: 29.76 MB / 1.595 GB, free: 218.4 MB / 0.7013 GB Notification: Performance of solveInitialSystemEqSystem (initialization): time 0.0002517/4.334, allocations: 45.09 kB / 1.595 GB, free: 218.4 MB / 0.7013 GB Notification: Performance of matching and sorting (n=1889) (initialization): time 0.4272/4.761, allocations: 81.42 MB / 1.675 GB, free: 174.7 MB / 0.7013 GB Notification: Performance of prepare postOptimizeDAE: time 0.0001288/4.761, allocations: 68 kB / 1.675 GB, free: 174.7 MB / 0.7013 GB Notification: Performance of postOpt simplifyComplexFunction (initialization): time 0.0002575/4.762, allocations: 148 kB / 1.675 GB, free: 174.5 MB / 0.7013 GB Notification: Performance of postOpt tearingSystem (initialization): time 0.05684/4.818, allocations: 22.38 MB / 1.697 GB, free: 152.3 MB / 0.7013 GB Notification: Performance of postOpt solveSimpleEquations (initialization): time 0.01665/4.835, allocations: 3.726 MB / 1.7 GB, free: 148.6 MB / 0.7013 GB Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 0.1697/5.005, allocations: 93.62 MB / 1.792 GB, free: 54.7 MB / 0.7013 GB Notification: Performance of postOpt simplifyAllExpressions (initialization): time 0.01804/5.023, allocations: 0.8235 MB / 1.793 GB, free: 53.88 MB / 0.7013 GB Notification: Performance of postOpt collapseArrayExpressions (initialization): time 0.005002/5.028, allocations: 0.9329 MB / 1.794 GB, free: 52.95 MB / 0.7013 GB Notification: Model statistics after passing the back-end for initialization: * Number of independent subsystems: 677 * Number of states: 0 () * Number of discrete variables: 0 () * Number of discrete states: 0 () * Number of clocked states: 0 () * Top-level inputs: 0 Notification: Strong component statistics for initialization (1841): * Single equations (assignments): 1838 * Array equations: 0 * Algorithm blocks: 0 * Record equations: 0 * When equations: 0 * If-equations: 0 * Equation systems (not torn): 0 * Torn equation systems: 3 * Mixed (continuous/discrete) equation systems: 0 Notification: Torn system details for strict tearing set: * Linear torn systems (#iteration vars, #inner vars, density): 2 systems {(1,3,100.0%), (33,10,82.4%)} * Non-linear torn systems (#iteration vars, #inner vars): 1 system {(1,3)} Notification: Performance of prepare postOptimizeDAE: time 0.01484/5.043, allocations: 5.38 MB / 1.799 GB, free: 47.64 MB / 0.7013 GB Notification: Performance of postOpt lateInlineFunction (simulation): time 0.005905/5.049, allocations: 1.108 MB / 1.8 GB, free: 47.15 MB / 0.7013 GB Notification: Performance of postOpt wrapFunctionCalls (simulation): time 0.5517/5.6, allocations: 48.48 MB / 1.847 GB, free: 217.6 MB / 0.7013 GB Notification: Performance of postOpt inlineArrayEqn (simulation): time 0.0001564/5.6, allocations: 120.2 kB / 1.847 GB, free: 217.6 MB / 0.7013 GB Notification: Performance of postOpt constantLinearSystem (simulation): time 8.776e-05/5.601, allocations: 22.38 kB / 1.847 GB, free: 217.6 MB / 0.7013 GB Notification: Performance of postOpt simplifysemiLinear (simulation): time 0.000432/5.601, allocations: 61.83 kB / 1.847 GB, free: 217.6 MB / 0.7013 GB Notification: Performance of postOpt removeSimpleEquations (simulation): time 0.3013/5.902, allocations: 73.24 MB / 1.919 GB, free: 199.6 MB / 0.7013 GB Notification: Performance of postOpt simplifyComplexFunction (simulation): time 0.000162/5.902, allocations: 2.5 kB / 1.919 GB, free: 199.6 MB / 0.7013 GB Notification: Performance of postOpt solveSimpleEquations (simulation): time 0.01409/5.917, allocations: 2.417 MB / 1.921 GB, free: 199 MB / 0.7013 GB Notification: Performance of postOpt tearingSystem (simulation): time 0.03114/5.948, allocations: 11.9 MB / 1.933 GB, free: 193.7 MB / 0.7013 GB Notification: Performance of postOpt inputDerivativesUsed (simulation): time 0.004193/5.952, allocations: 476.8 kB / 1.933 GB, free: 193.4 MB / 0.7013 GB Notification: Performance of postOpt calculateStrongComponentJacobians (simulation): time 0.09959/6.051, allocations: 46.59 MB / 1.979 GB, free: 159.6 MB / 0.7013 GB Notification: Performance of postOpt calculateStateSetsJacobians (simulation): time 3.817e-06/6.051, allocations: 7.938 kB / 1.979 GB, free: 159.6 MB / 0.7013 GB Notification: Performance of postOpt symbolicJacobian (simulation): time 0.2683/6.32, allocations: 62.66 MB / 2.04 GB, free: 97.43 MB / 0.7013 GB Notification: Performance of postOpt removeConstants (simulation): time 0.01103/6.331, allocations: 3.445 MB / 2.043 GB, free: 94.64 MB / 0.7013 GB Notification: Performance of postOpt simplifyTimeIndepFuncCalls (simulation): time 0.00486/6.336, allocations: 299.8 kB / 2.044 GB, free: 94.35 MB / 0.7013 GB Notification: Performance of postOpt simplifyAllExpressions (simulation): time 0.01207/6.348, allocations: 0.515 MB / 2.044 GB, free: 93.84 MB / 0.7013 GB Notification: Performance of postOpt findZeroCrossings (simulation): time 0.005462/6.353, allocations: 1.561 MB / 2.046 GB, free: 92.27 MB / 0.7013 GB Notification: Performance of postOpt collapseArrayExpressions (simulation): time 0.002077/6.355, allocations: 471.6 kB / 2.046 GB, free: 91.81 MB / 0.7013 GB Notification: Performance of sorting global known variables: time 0.009795/6.365, allocations: 6.993 MB / 2.053 GB, free: 84.87 MB / 0.7013 GB Notification: Performance of sort global known variables: time 2e-07/6.365, allocations: 0 / 2.053 GB, free: 84.87 MB / 0.7013 GB Notification: Performance of remove unused functions: time 0.02605/6.391, allocations: 6.721 MB / 2.06 GB, free: 78.54 MB / 0.7013 GB Notification: Model statistics after passing the back-end for simulation: * Number of independent subsystems: 15 * Number of states: 60 (solution.temperature,O2_free.logn,H2O.logn,relaxed.OxyHm[1].logn,relaxed.OxyHm[2].logn,relaxed.OxyHm[3].logn,relaxed.OxyHm[4].logn,relaxed.DeoxyHm[1].logn,relaxed.DeoxyHm[2].logn,relaxed.DeoxyHm[3].logn,relaxed.DeoxyHm[4].logn,relaxed.HmAH[1].logn,relaxed.HmAH[2].logn,relaxed.HmAH[3].logn,relaxed.HmAH[4].logn,relaxed.HmA[1].logn,relaxed.HmA[2].logn,relaxed.HmA[3].logn,relaxed.HmA[4].logn,relaxed.HmNH3[1].logn,relaxed.HmNH3[2].logn,relaxed.HmNH3[3].logn,relaxed.HmNH3[4].logn,relaxed.HmNH2[1].logn,relaxed.HmNH2[2].logn,relaxed.HmNH2[3].logn,relaxed.HmNH2[4].logn,relaxed.HmNHCOO[1].logn,relaxed.HmNHCOO[2].logn,relaxed.HmNHCOO[3].logn,relaxed.HmNHCOO[4].logn,tensed.OxyHm[1].logn,tensed.OxyHm[2].logn,tensed.OxyHm[3].logn,tensed.OxyHm[4].logn,tensed.DeoxyHm[1].logn,tensed.DeoxyHm[2].logn,tensed.DeoxyHm[3].logn,tensed.DeoxyHm[4].logn,tensed.HmAH[1].logn,tensed.HmAH[2].logn,tensed.HmAH[3].logn,tensed.HmAH[4].logn,tensed.HmA[1].logn,tensed.HmA[2].logn,tensed.HmA[3].logn,tensed.HmA[4].logn,tensed.HmNH3[1].logn,tensed.HmNH3[2].logn,tensed.HmNH3[3].logn,tensed.HmNH3[4].logn,tensed.HmNH2[1].logn,tensed.HmNH2[2].logn,tensed.HmNH2[3].logn,tensed.HmNH2[4].logn,tensed.HmNHCOO[1].logn,tensed.HmNHCOO[2].logn,tensed.HmNHCOO[3].logn,tensed.HmNHCOO[4].logn,CO2_free.logn) * Number of discrete variables: 0 () * Number of discrete states: 0 () * Number of clocked states: 0 () * Top-level inputs: 0 Notification: Strong component statistics for simulation (1234): * Single equations (assignments): 1231 * Array equations: 0 * Algorithm blocks: 0 * Record equations: 0 * When equations: 0 * If-equations: 0 * Equation systems (not torn): 0 * Torn equation systems: 3 * Mixed (continuous/discrete) equation systems: 0 Notification: Torn system details for strict tearing set: * Linear torn systems (#iteration vars, #inner vars, density): 2 systems {(1,3,100.0%), (33,10,82.4%)} * Non-linear torn systems (#iteration vars, #inner vars): 1 system {(1,3)} Notification: Performance of Backend phase and start with SimCode phase: time 0.008883/6.4, allocations: 3.637 MB / 2.063 GB, free: 75.29 MB / 0.7013 GB Notification: Performance of simCode: created initialization part: time 0.06262/6.463, allocations: 26.38 MB / 2.089 GB, free: 48.89 MB / 0.7013 GB Notification: Performance of simCode: created event and clocks part: time 1.123e-05/6.463, allocations: 4 kB / 2.089 GB, free: 48.89 MB / 0.7013 GB Notification: Performance of simCode: created simulation system equations: time 0.03591/6.499, allocations: 13.61 MB / 2.102 GB, free: 35.26 MB / 0.7013 GB Notification: Performance of simCode: created of all other equations (e.g. parameter, nominal, assert, etc): time 0.01555/6.514, allocations: 2.509 MB / 2.105 GB, free: 32.88 MB / 0.7013 GB Notification: Performance of simCode: created linear, non-linear and system jacobian parts: time 0.3523/6.866, allocations: 38.17 MB / 2.142 GB, free: 214.7 MB / 0.7013 GB Notification: Performance of simCode: some other stuff during SimCode phase: time 0.01664/6.883, allocations: 9.632 MB / 2.151 GB, free: 213.7 MB / 0.7013 GB Notification: Performance of simCode: all other stuff during SimCode phase: time 0.007758/6.891, allocations: 1.564 MB / 2.153 GB, free: 213.6 MB / 0.7013 GB Notification: Performance of SimCode: time 8.41e-07/6.891, allocations: 0 / 2.153 GB, free: 213.6 MB / 0.7013 GB Notification: Performance of Templates: time 0.8216/7.712, allocations: 0.5144 GB / 2.667 GB, free: 15.09 MB / 0.7013 GB " [Timeout remaining time 652] make -j1 -f Chemical_Chemical.Obsolete.Examples.Hemoglobin.HemoglobinCarboxylation.makefile [Timeout 660] (rm -f Chemical_Chemical.Obsolete.Examples.Hemoglobin.HemoglobinCarboxylation.pipe ; mkfifo Chemical_Chemical.Obsolete.Examples.Hemoglobin.HemoglobinCarboxylation.pipe ; head -c 1048576 < Chemical_Chemical.Obsolete.Examples.Hemoglobin.HemoglobinCarboxylation.pipe >> ../files/Chemical_Chemical.Obsolete.Examples.Hemoglobin.HemoglobinCarboxylation.sim & ./Chemical_Chemical.Obsolete.Examples.Hemoglobin.HemoglobinCarboxylation -abortSlowSimulation -alarm=480 -lv LOG_STATS > Chemical_Chemical.Obsolete.Examples.Hemoglobin.HemoglobinCarboxylation.pipe 2>&1) [Timeout 480] [Calling sys.exit(0), Time elapsed: 33.80852534202859] Failed to read output from testmodel.py, exit status != 0: 7.722861780086532 7.909497754 6.622409034 Calling exit ...