Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr Chemical_Chemical.Obsolete.Examples.Hemoglobin.Joels57.conf.json
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo): time 0.001999/0.001999, allocations: 102.9 kB / 16.45 MB, free: 6.449 MB / 14.72 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo): time 0.002197/0.002197, allocations: 206.4 kB / 19.42 MB, free: 3.641 MB / 14.72 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo): time 1.593/1.593, allocations: 230.5 MB / 252.8 MB, free: 8.984 MB / 206.1 MB
"
[Timeout remaining time 178]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/package.mo): time 0.1456/0.1456, allocations: 23.85 MB / 332.7 MB, free: 12.36 MB / 270.1 MB
"
[Timeout remaining time 180]
Using package Chemical with version 2.0.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/package.mo)
Using package Modelica with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo)
Using package Complex with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo)
Using package ModelicaServices with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo)
Running command: translateModel(Chemical.Obsolete.Examples.Hemoglobin.Joels57,tolerance=1e-05,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Chemical_Chemical.Obsolete.Examples.Hemoglobin.Joels57")
translateModel(Chemical.Obsolete.Examples.Hemoglobin.Joels57,tolerance=1e-05,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Chemical_Chemical.Obsolete.Examples.Hemoglobin.Joels57") [Timeout 660]
"Notification: Chemical requested package Modelica of version 4.0.0. Modelica 4.1.0 is used instead which states that it is fully compatible without conversion script needed.
Notification: Performance of FrontEnd - loaded program: time 0.002053/0.002053, allocations: 70.67 kB / 466.5 MB, free: 9.602 MB / 334.1 MB
Notification: Performance of FrontEnd - Absyn->SCode: time 0.336/0.3381, allocations: 59.82 MB / 0.514 GB, free: 9.18 MB / 382.1 MB
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/Obsolete.mo:14337:7-14337:66:writable] Warning: An inner declaration for outer component system could not be found and was automatically generated.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/Obsolete.mo:14337:7-14337:66:writable] Notification: The diagnostics message for the missing inner is: 
Your model is using an outer \"system\" component but
an inner \"system\" component is not defined.
For simulation drag Modelica.Fluid.System into your model
to specify system properties.
Notification: Performance of NFInst.instantiate(Chemical.Obsolete.Examples.Hemoglobin.Joels57): time 0.1015/0.4396, allocations: 83.11 MB / 0.5951 GB, free: 8.043 MB / 446.1 MB
Notification: Performance of NFInst.instExpressions: time 0.5583/0.9979, allocations: 217.7 MB / 0.8077 GB, free: 14.57 MB / 0.5606 GB
Notification: Performance of NFInst.updateImplicitVariability: time 0.01309/1.011, allocations: 229.8 kB / 0.8079 GB, free: 14.57 MB / 0.5606 GB
Notification: Performance of NFTyping.typeComponents: time 0.01479/1.026, allocations: 4.914 MB / 0.8127 GB, free: 13.46 MB / 0.5606 GB
Notification: Performance of NFTyping.typeBindings: time 0.05032/1.076, allocations: 17.77 MB / 0.8301 GB, free: 6.137 MB / 0.5606 GB
Notification: Performance of NFTyping.typeClassSections: time 0.09135/1.167, allocations: 32.37 MB / 0.8617 GB, free: 1.895 MB / 0.5762 GB
Notification: Performance of NFFlatten.flatten: time 0.1072/1.275, allocations: 89.23 MB / 0.9488 GB, free: 10.1 MB / 0.67 GB
Notification: Performance of NFFlatten.resolveConnections: time 0.7803/2.055, allocations: 61.24 MB / 1.009 GB, free: 14.25 MB / 0.7013 GB
Notification: Performance of NFEvalConstants.evaluate: time 0.07611/2.131, allocations: 56.5 MB / 1.064 GB, free: 11.27 MB / 0.7013 GB
Notification: Performance of NFSimplifyModel.simplify: time 0.08486/2.216, allocations: 52.02 MB / 1.115 GB, free: 5.828 MB / 0.7013 GB
Notification: Performance of NFPackage.collectConstants: time 0.04365/2.26, allocations: 12.71 MB / 1.127 GB, free: 13.36 MB / 0.7169 GB
Notification: Performance of NFFlatten.collectFunctions: time 0.1372/2.397, allocations: 35.44 MB / 1.162 GB, free: 15.41 MB / 0.7482 GB
Notification: Performance of NFScalarize.scalarize: time 0.06014/2.457, allocations: 24.02 MB / 1.185 GB, free: 8.102 MB / 0.7638 GB
Notification: Performance of NFVerifyModel.verify: time 0.0917/2.549, allocations: 40.57 MB / 1.225 GB, free: 244 kB / 0.795 GB
Notification: Performance of NFConvertDAE.convert: time 0.9502/3.499, allocations: 159.5 MB / 1.38 GB, free: 146.9 MB / 0.8577 GB
Notification: Performance of FrontEnd - DAE generated: time 6.252e-06/3.499, allocations: 0 / 1.38 GB, free: 146.9 MB / 0.8577 GB
Notification: Performance of FrontEnd: time 1.553e-06/3.499, allocations: 3.781 kB / 1.38 GB, free: 146.9 MB / 0.8577 GB
Notification: Performance of Transformations before backend: time 0.003576/3.502, allocations: 2.906 kB / 1.38 GB, free: 146.9 MB / 0.8577 GB
Notification: Model statistics after passing the front-end and creating the data structures used by the back-end:
 * Number of equations: 11424
 * Number of variables: 11424
Notification: Performance of Generate backend data structure: time 0.2983/3.801, allocations: 71.8 MB / 1.451 GB, free: 114.9 MB / 0.8577 GB
Notification: Performance of prepare preOptimizeDAE: time 4.152e-05/3.801, allocations: 7.625 kB / 1.451 GB, free: 114.9 MB / 0.8577 GB
Notification: Performance of preOpt normalInlineFunction (simulation): time 0.09547/3.896, allocations: 11.94 MB / 1.462 GB, free: 110.2 MB / 0.8577 GB
Notification: Performance of preOpt evaluateParameters (simulation): time 0.1034/4, allocations: 41.28 MB / 1.503 GB, free: 84.96 MB / 0.8577 GB
Notification: Performance of preOpt simplifyIfEquations (simulation): time 0.005253/4.005, allocations: 6.432 MB / 1.509 GB, free: 77.88 MB / 0.8577 GB
Notification: Performance of preOpt expandDerOperator (simulation): time 0.03779/4.043, allocations: 4.598 MB / 1.513 GB, free: 73.28 MB / 0.8577 GB
Notification: Performance of preOpt clockPartitioning (simulation): time 0.6717/4.714, allocations: 112.8 MB / 1.623 GB, free: 277.5 MB / 0.8733 GB
Notification: Performance of preOpt findStateOrder (simulation): time 0.003594/4.718, allocations: 26.91 kB / 1.623 GB, free: 277.5 MB / 0.8733 GB
Notification: Performance of preOpt replaceEdgeChange (simulation): time 0.04186/4.76, allocations: 1.76 MB / 1.625 GB, free: 277.5 MB / 0.8733 GB
Notification: Performance of preOpt inlineArrayEqn (simulation): time 0.001717/4.762, allocations: 1.056 MB / 1.626 GB, free: 277.5 MB / 0.8733 GB
Notification: Performance of preOpt removeEqualRHS (simulation): time 0.3261/5.088, allocations: 153.7 MB / 1.776 GB, free: 203.4 MB / 0.8733 GB
Warning: The model contains alias variables with redundant start and/or conflicting nominal values. It is recommended to resolve the conflicts, because otherwise the system could be hard to solve. To print the conflicting alias sets and the chosen candidates please use -d=aliasConflicts.
Notification: Performance of preOpt removeSimpleEquations (simulation): time 1.466/6.554, allocations: 436.4 MB / 2.203 GB, free: 145.8 MB / 0.8733 GB
Notification: Performance of preOpt comSubExp (simulation): time 2.606/9.159, allocations: 0.8136 GB / 3.016 GB, free: 74.81 MB / 0.8733 GB
Notification: Performance of preOpt resolveLoops (simulation): time 0.09897/9.258, allocations: 60.08 MB / 3.075 GB, free: 14.61 MB / 0.8733 GB
Notification: Performance of preOpt evalFunc (simulation): time 0.8869/10.15, allocations: 298.5 MB / 3.366 GB, free: 96.57 MB / 0.8733 GB
Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 0.0002172/10.15, allocations: 334 kB / 3.367 GB, free: 96.24 MB / 0.8733 GB
Notification: Performance of preOpt simplifyInStream (simulation): time 0.4797/10.62, allocations: 29.33 MB / 3.395 GB, free: 274.5 MB / 0.8733 GB
Notification: Performance of pre-optimization done (n=2985): time 0.0001623/10.63, allocations: 3.375 kB / 3.395 GB, free: 274.5 MB / 0.8733 GB
Notification: Performance of matching and sorting (n=3387): time 2.541/13.17, allocations: 424.5 MB / 3.81 GB, free: 222.6 MB / 0.8733 GB
Notification: Performance of inlineWhenForInitialization (initialization): time 0.0002034/13.17, allocations: 450.7 kB / 3.81 GB, free: 222.4 MB / 0.8733 GB
Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.05653/13.22, allocations: 32.16 MB / 3.842 GB, free: 206.3 MB / 0.8733 GB
Notification: Performance of collectPreVariables (initialization): time 0.01302/13.24, allocations: 0.5688 MB / 3.842 GB, free: 205.9 MB / 0.8733 GB
Notification: Performance of collectInitialEqns (initialization): time 0.01602/13.25, allocations: 21.74 MB / 3.863 GB, free: 191 MB / 0.8733 GB
Notification: Performance of collectInitialBindings (initialization): time 0.02099/13.27, allocations: 12.4 MB / 3.875 GB, free: 180.3 MB / 0.8733 GB
Notification: Performance of simplifyInitialFunctions (initialization): time 0.04939/13.32, allocations: 9.933 MB / 3.885 GB, free: 174.8 MB / 0.8733 GB
Notification: Performance of setup shared object (initialization): time 4.326e-05/13.32, allocations: 304.2 kB / 3.885 GB, free: 174.5 MB / 0.8733 GB
Notification: Performance of preBalanceInitialSystem (initialization): time 0.06838/13.39, allocations: 38.99 MB / 3.924 GB, free: 139.7 MB / 0.8733 GB
Notification: Performance of partitionIndependentBlocks (initialization): time 0.08304/13.47, allocations: 53.19 MB / 3.975 GB, free: 80.3 MB / 0.8733 GB
Notification: Performance of analyzeInitialSystem (initialization): time 0.5472/14.02, allocations: 96.31 MB / 4.07 GB, free: 189.8 MB / 0.8733 GB
Notification: Performance of solveInitialSystemEqSystem (initialization): time 0.0003322/14.02, allocations: 131.2 kB / 4.07 GB, free: 189.8 MB / 0.8733 GB
Notification: Performance of matching and sorting (n=5667) (initialization): time 1.829/15.85, allocations: 257.2 MB / 4.321 GB, free: 196.5 MB / 0.8733 GB
Notification: Performance of prepare postOptimizeDAE: time 0.0003863/15.85, allocations: 195.6 kB / 4.321 GB, free: 196.5 MB / 0.8733 GB
Notification: Performance of postOpt simplifyComplexFunction (initialization): time 0.0008441/15.85, allocations: 448.6 kB / 4.321 GB, free: 196.5 MB / 0.8733 GB
Notification: Performance of postOpt tearingSystem (initialization): time 0.1899/16.04, allocations: 73.72 MB / 4.393 GB, free: 193.4 MB / 0.8733 GB
Notification: Performance of postOpt solveSimpleEquations (initialization): time 0.05374/16.1, allocations: 11.18 MB / 4.404 GB, free: 193.4 MB / 0.8733 GB
Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 1.032/17.13, allocations: 315.2 MB / 4.712 GB, free: 179.7 MB / 0.8733 GB
Notification: Performance of postOpt simplifyAllExpressions (initialization): time 0.05869/17.19, allocations: 2.473 MB / 4.715 GB, free: 179 MB / 0.8733 GB
Notification: Performance of postOpt collapseArrayExpressions (initialization): time 0.0177/17.2, allocations: 2.803 MB / 4.717 GB, free: 178.6 MB / 0.8733 GB
Notification: Model statistics after passing the back-end for initialization:
 * Number of independent subsystems: 2031
 * Number of states: 0 ()
 * Number of discrete variables: 0 ()
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for initialization (5523):
 * Single equations (assignments): 5514
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 0
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 9
 * Mixed (continuous/discrete) equation systems: 0
Notification: Torn system details for strict tearing set:
 * Linear torn systems (#iteration vars, #inner vars, density): 6 systems
   {(1,3,100.0%), (33,10,82.4%), (1,3,100.0%), (33,10,82.4%), (1,3,100.0%), (33,10,82.4%)}
 * Non-linear torn systems (#iteration vars, #inner vars): 3 systems
   {(1,3), (1,3), (1,3)}
Notification: Performance of prepare postOptimizeDAE: time 0.05155/17.26, allocations: 18.34 MB / 4.735 GB, free: 170.7 MB / 0.8733 GB
Notification: Performance of postOpt lateInlineFunction (simulation): time 0.02094/17.28, allocations: 3.319 MB / 4.738 GB, free: 170.7 MB / 0.8733 GB
Notification: Performance of postOpt wrapFunctionCalls (simulation): time 0.883/18.16, allocations: 152.4 MB / 4.887 GB, free: 82.57 MB / 0.8733 GB
Notification: Performance of postOpt inlineArrayEqn (simulation): time 0.0003323/18.16, allocations: 360 kB / 4.888 GB, free: 82.22 MB / 0.8733 GB
Notification: Performance of postOpt constantLinearSystem (simulation): time 0.000452/18.16, allocations: 56 kB / 4.888 GB, free: 82.16 MB / 0.8733 GB
Notification: Performance of postOpt simplifysemiLinear (simulation): time 0.001088/18.16, allocations: 179.3 kB / 4.888 GB, free: 81.99 MB / 0.8733 GB
Notification: Performance of postOpt removeSimpleEquations (simulation): time 1.438/19.6, allocations: 238 MB / 5.12 GB, free: 156.9 MB / 0.8733 GB
Notification: Performance of postOpt simplifyComplexFunction (simulation): time 0.0003575/19.6, allocations: 7.875 kB / 5.12 GB, free: 156.9 MB / 0.8733 GB
Notification: Performance of postOpt solveSimpleEquations (simulation): time 0.04712/19.65, allocations: 7.25 MB / 5.127 GB, free: 155.6 MB / 0.8733 GB
Notification: Performance of postOpt tearingSystem (simulation): time 0.1046/19.75, allocations: 39.76 MB / 5.166 GB, free: 125 MB / 0.8733 GB
Notification: Performance of postOpt inputDerivativesUsed (simulation): time 0.01174/19.76, allocations: 1.444 MB / 5.168 GB, free: 123.6 MB / 0.8733 GB
Notification: Performance of postOpt calculateStrongComponentJacobians (simulation): time 0.7551/20.52, allocations: 159.6 MB / 5.323 GB, free: 189.8 MB / 0.8733 GB
Notification: Performance of postOpt calculateStateSetsJacobians (simulation): time 1.074e-05/20.52, allocations: 17.98 kB / 5.323 GB, free: 189.8 MB / 0.8733 GB
Notification: Performance of postOpt symbolicJacobian (simulation): time 0.9324/21.45, allocations: 200.4 MB / 5.519 GB, free: 85.34 MB / 0.8733 GB
Notification: Performance of postOpt removeConstants (simulation): time 0.0333/21.48, allocations: 11.15 MB / 5.53 GB, free: 76.14 MB / 0.8733 GB
Notification: Performance of postOpt simplifyTimeIndepFuncCalls (simulation): time 0.01928/21.5, allocations: 0.9177 MB / 5.531 GB, free: 75.23 MB / 0.8733 GB
Notification: Performance of postOpt simplifyAllExpressions (simulation): time 0.04303/21.55, allocations: 1.545 MB / 5.532 GB, free: 73.68 MB / 0.8733 GB
Notification: Performance of postOpt findZeroCrossings (simulation): time 0.02503/21.57, allocations: 4.549 MB / 5.537 GB, free: 69.12 MB / 0.8733 GB
Notification: Performance of postOpt collapseArrayExpressions (simulation): time 0.01213/21.58, allocations: 1.382 MB / 5.538 GB, free: 67.73 MB / 0.8733 GB
Notification: Performance of sorting global known variables: time 0.0433/21.63, allocations: 22.38 MB / 5.56 GB, free: 45.5 MB / 0.8733 GB
Notification: Performance of sort global known variables: time 1e-07/21.63, allocations: 6.344 kB / 5.56 GB, free: 45.5 MB / 0.8733 GB
Notification: Performance of remove unused functions: time 0.09431/21.72, allocations: 20.24 MB / 5.58 GB, free: 25.25 MB / 0.8733 GB
Notification: Model statistics after passing the back-end for simulation:
 * Number of independent subsystems: 45
 * Number of states: 180 (pCO2_2000.solution.temperature,pCO2_2000.O2_free.logn,pCO2_2000.H2O.logn,pCO2_2000.relaxed.OxyHm[1].logn,pCO2_2000.relaxed.OxyHm[2].logn,pCO2_2000.relaxed.OxyHm[3].logn,pCO2_2000.relaxed.OxyHm[4].logn,pCO2_2000.relaxed.DeoxyHm[1].logn,pCO2_2000.relaxed.DeoxyHm[2].logn,pCO2_2000.relaxed.DeoxyHm[3].logn,pCO2_2000.relaxed.DeoxyHm[4].logn,pCO2_2000.relaxed.HmAH[1].logn,pCO2_2000.relaxed.HmAH[2].logn,pCO2_2000.relaxed.HmAH[3].logn,pCO2_2000.relaxed.HmAH[4].logn,pCO2_2000.relaxed.HmA[1].logn,pCO2_2000.relaxed.HmA[2].logn,pCO2_2000.relaxed.HmA[3].logn,pCO2_2000.relaxed.HmA[4].logn,pCO2_2000.relaxed.HmNH3[1].logn,pCO2_2000.relaxed.HmNH3[2].logn,pCO2_2000.relaxed.HmNH3[3].logn,pCO2_2000.relaxed.HmNH3[4].logn,pCO2_2000.relaxed.HmNH2[1].logn,pCO2_2000.relaxed.HmNH2[2].logn,pCO2_2000.relaxed.HmNH2[3].logn,pCO2_2000.relaxed.HmNH2[4].logn,pCO2_2000.relaxed.HmNHCOO[1].logn,pCO2_2000.relaxed.HmNHCOO[2].logn,pCO2_2000.relaxed.HmNHCOO[3].logn,pCO2_2000.relaxed.HmNHCOO[4].logn,pCO2_2000.tensed.OxyHm[1].logn,pCO2_2000.tensed.OxyHm[2].logn,pCO2_2000.tensed.OxyHm[3].logn,pCO2_2000.tensed.OxyHm[4].logn,pCO2_2000.tensed.DeoxyHm[1].logn,pCO2_2000.tensed.DeoxyHm[2].logn,pCO2_2000.tensed.DeoxyHm[3].logn,pCO2_2000.tensed.DeoxyHm[4].logn,pCO2_2000.tensed.HmAH[1].logn,pCO2_2000.tensed.HmAH[2].logn,pCO2_2000.tensed.HmAH[3].logn,pCO2_2000.tensed.HmAH[4].logn,pCO2_2000.tensed.HmA[1].logn,pCO2_2000.tensed.HmA[2].logn,pCO2_2000.tensed.HmA[3].logn,pCO2_2000.tensed.HmA[4].logn,pCO2_2000.tensed.HmNH3[1].logn,pCO2_2000.tensed.HmNH3[2].logn,pCO2_2000.tensed.HmNH3[3].logn,pCO2_2000.tensed.HmNH3[4].logn,pCO2_2000.tensed.HmNH2[1].logn,pCO2_2000.tensed.HmNH2[2].logn,pCO2_2000.tensed.HmNH2[3].logn,pCO2_2000.tensed.HmNH2[4].logn,pCO2_2000.tensed.HmNHCOO[1].logn,pCO2_2000.tensed.HmNHCOO[2].logn,pCO2_2000.tensed.HmNHCOO[3].logn,pCO2_2000.tensed.HmNHCOO[4].logn,pCO2_2000.CO2_free.logn,pCO2_5330.solution.temperature,pCO2_5330.O2_free.logn,pCO2_5330.H2O.logn,pCO2_5330.relaxed.OxyHm[1].logn,pCO2_5330.relaxed.OxyHm[2].logn,pCO2_5330.relaxed.OxyHm[3].logn,pCO2_5330.relaxed.OxyHm[4].logn,pCO2_5330.relaxed.DeoxyHm[1].logn,pCO2_5330.relaxed.DeoxyHm[2].logn,pCO2_5330.relaxed.DeoxyHm[3].logn,pCO2_5330.relaxed.DeoxyHm[4].logn,pCO2_5330.relaxed.HmAH[1].logn,pCO2_5330.relaxed.HmAH[2].logn,pCO2_5330.relaxed.HmAH[3].logn,pCO2_5330.relaxed.HmAH[4].logn,pCO2_5330.relaxed.HmA[1].logn,pCO2_5330.relaxed.HmA[2].logn,pCO2_5330.relaxed.HmA[3].logn,pCO2_5330.relaxed.HmA[4].logn,pCO2_5330.relaxed.HmNH3[1].logn,pCO2_5330.relaxed.HmNH3[2].logn,pCO2_5330.relaxed.HmNH3[3].logn,pCO2_5330.relaxed.HmNH3[4].logn,pCO2_5330.relaxed.HmNH2[1].logn,pCO2_5330.relaxed.HmNH2[2].logn,pCO2_5330.relaxed.HmNH2[3].logn,pCO2_5330.relaxed.HmNH2[4].logn,pCO2_5330.relaxed.HmNHCOO[1].logn,pCO2_5330.relaxed.HmNHCOO[2].logn,pCO2_5330.relaxed.HmNHCOO[3].logn,pCO2_5330.relaxed.HmNHCOO[4].logn,pCO2_5330.tensed.OxyHm[1].logn,pCO2_5330.tensed.OxyHm[2].logn,pCO2_5330.tensed.OxyHm[3].logn,pCO2_5330.tensed.OxyHm[4].logn,pCO2_5330.tensed.DeoxyHm[1].logn,pCO2_5330.tensed.DeoxyHm[2].logn,pCO2_5330.tensed.DeoxyHm[3].logn,pCO2_5330.tensed.DeoxyHm[4].logn,pCO2_5330.tensed.HmAH[1].logn,pCO2_5330.tensed.HmAH[2].logn,pCO2_5330.tensed.HmAH[3].logn,pCO2_5330.tensed.HmAH[4].logn,pCO2_5330.tensed.HmA[1].logn,pCO2_5330.tensed.HmA[2].logn,pCO2_5330.tensed.HmA[3].logn,pCO2_5330.tensed.HmA[4].logn,pCO2_5330.tensed.HmNH3[1].logn,pCO2_5330.tensed.HmNH3[2].logn,pCO2_5330.tensed.HmNH3[3].logn,pCO2_5330.tensed.HmNH3[4].logn,pCO2_5330.tensed.HmNH2[1].logn,pCO2_5330.tensed.HmNH2[2].logn,pCO2_5330.tensed.HmNH2[3].logn,pCO2_5330.tensed.HmNH2[4].logn,pCO2_5330.tensed.HmNHCOO[1].logn,pCO2_5330.tensed.HmNHCOO[2].logn,pCO2_5330.tensed.HmNHCOO[3].logn,pCO2_5330.tensed.HmNHCOO[4].logn,pCO2_5330.CO2_free.logn,pCO2_9330.solution.temperature,pCO2_9330.O2_free.logn,pCO2_9330.H2O.logn,pCO2_9330.relaxed.OxyHm[1].logn,pCO2_9330.relaxed.OxyHm[2].logn,pCO2_9330.relaxed.OxyHm[3].logn,pCO2_9330.relaxed.OxyHm[4].logn,pCO2_9330.relaxed.DeoxyHm[1].logn,pCO2_9330.relaxed.DeoxyHm[2].logn,pCO2_9330.relaxed.DeoxyHm[3].logn,pCO2_9330.relaxed.DeoxyHm[4].logn,pCO2_9330.relaxed.HmAH[1].logn,pCO2_9330.relaxed.HmAH[2].logn,pCO2_9330.relaxed.HmAH[3].logn,pCO2_9330.relaxed.HmAH[4].logn,pCO2_9330.relaxed.HmA[1].logn,pCO2_9330.relaxed.HmA[2].logn,pCO2_9330.relaxed.HmA[3].logn,pCO2_9330.relaxed.HmA[4].logn,pCO2_9330.relaxed.HmNH3[1].logn,pCO2_9330.relaxed.HmNH3[2].logn,pCO2_9330.relaxed.HmNH3[3].logn,pCO2_9330.relaxed.HmNH3[4].logn,pCO2_9330.relaxed.HmNH2[1].logn,pCO2_9330.relaxed.HmNH2[2].logn,pCO2_9330.relaxed.HmNH2[3].logn,pCO2_9330.relaxed.HmNH2[4].logn,pCO2_9330.relaxed.HmNHCOO[1].logn,pCO2_9330.relaxed.HmNHCOO[2].logn,pCO2_9330.relaxed.HmNHCOO[3].logn,pCO2_9330.relaxed.HmNHCOO[4].logn,pCO2_9330.tensed.OxyHm[1].logn,pCO2_9330.tensed.OxyHm[2].logn,pCO2_9330.tensed.OxyHm[3].logn,pCO2_9330.tensed.OxyHm[4].logn,pCO2_9330.tensed.DeoxyHm[1].logn,pCO2_9330.tensed.DeoxyHm[2].logn,pCO2_9330.tensed.DeoxyHm[3].logn,pCO2_9330.tensed.DeoxyHm[4].logn,pCO2_9330.tensed.HmAH[1].logn,pCO2_9330.tensed.HmAH[2].logn,pCO2_9330.tensed.HmAH[3].logn,pCO2_9330.tensed.HmAH[4].logn,pCO2_9330.tensed.HmA[1].logn,pCO2_9330.tensed.HmA[2].logn,pCO2_9330.tensed.HmA[3].logn,pCO2_9330.tensed.HmA[4].logn,pCO2_9330.tensed.HmNH3[1].logn,pCO2_9330.tensed.HmNH3[2].logn,pCO2_9330.tensed.HmNH3[3].logn,pCO2_9330.tensed.HmNH3[4].logn,pCO2_9330.tensed.HmNH2[1].logn,pCO2_9330.tensed.HmNH2[2].logn,pCO2_9330.tensed.HmNH2[3].logn,pCO2_9330.tensed.HmNH2[4].logn,pCO2_9330.tensed.HmNHCOO[1].logn,pCO2_9330.tensed.HmNHCOO[2].logn,pCO2_9330.tensed.HmNHCOO[3].logn,pCO2_9330.tensed.HmNHCOO[4].logn,pCO2_9330.CO2_free.logn)
 * Number of discrete variables: 0 ()
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for simulation (3702):
 * Single equations (assignments): 3693
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 0
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 9
 * Mixed (continuous/discrete) equation systems: 0
Notification: Torn system details for strict tearing set:
 * Linear torn systems (#iteration vars, #inner vars, density): 6 systems
   {(1,3,100.0%), (33,10,82.4%), (1,3,100.0%), (33,10,82.4%), (1,3,100.0%), (33,10,82.4%)}
 * Non-linear torn systems (#iteration vars, #inner vars): 3 systems
   {(1,3), (1,3), (1,3)}
Notification: Performance of Backend phase and start with SimCode phase: time 0.4157/22.14, allocations: 10.8 MB / 5.59 GB, free: 211.5 MB / 0.8733 GB
Notification: Performance of simCode: created initialization part: time 0.2424/22.38, allocations: 85.25 MB / 5.674 GB, free: 200.7 MB / 0.8733 GB
Notification: Performance of simCode: created event and clocks part: time 1.715e-05/22.38, allocations: 3.906 kB / 5.674 GB, free: 200.7 MB / 0.8733 GB
Notification: Performance of simCode: created simulation system equations: time 0.1394/22.52, allocations: 54.53 MB / 5.727 GB, free: 179.1 MB / 0.8733 GB
Notification: Performance of simCode: created of all other equations (e.g. parameter, nominal, assert, etc): time 0.06809/22.59, allocations: 7.817 MB / 5.735 GB, free: 176 MB / 0.8733 GB
Notification: Performance of simCode: created linear, non-linear and system jacobian parts: time 0.3224/22.91, allocations: 122.8 MB / 5.854 GB, free: 75.39 MB / 0.8733 GB
Notification: Performance of simCode: some other stuff during SimCode phase: time 0.0576/22.97, allocations: 30.6 MB / 5.884 GB, free: 45.1 MB / 0.8733 GB
Notification: Performance of simCode: alias equations: time 0.06044/23.03, allocations: 15.63 MB / 5.9 GB, free: 29.51 MB / 0.8733 GB
Notification: Performance of simCode: all other stuff during SimCode phase: time 0.4686/23.5, allocations: 4.305 MB / 5.904 GB, free: 146.3 MB / 0.8733 GB
Notification: Performance of SimCode: time 8.82e-07/23.5, allocations: 2.5 kB / 5.904 GB, free: 146.3 MB / 0.8733 GB
Notification: Performance of Templates: time 2.83/26.33, allocations: 1.017 GB / 6.921 GB, free: 220.1 MB / 0.9358 GB
"
[Timeout remaining time 634]
make -j1 -f Chemical_Chemical.Obsolete.Examples.Hemoglobin.Joels57.makefile [Timeout 660]
(rm -f Chemical_Chemical.Obsolete.Examples.Hemoglobin.Joels57.pipe ; mkfifo Chemical_Chemical.Obsolete.Examples.Hemoglobin.Joels57.pipe ; head -c 1048576 < Chemical_Chemical.Obsolete.Examples.Hemoglobin.Joels57.pipe >> ../files/Chemical_Chemical.Obsolete.Examples.Hemoglobin.Joels57.sim & ./Chemical_Chemical.Obsolete.Examples.Hemoglobin.Joels57  -abortSlowSimulation -alarm=480 -lv LOG_STATS > Chemical_Chemical.Obsolete.Examples.Hemoglobin.Joels57.pipe 2>&1) [Timeout 480]
[Calling sys.exit(0), Time elapsed: 67.57444661483169]
Failed to read output from testmodel.py, exit status != 0:
26.3357693888247 26.348932619 22.847169756
Calling exit ...
<OMPython.OMCSessionZMQ object at 0x7fe919c957e0>