Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr Chemical_Chemical.Obsolete.Examples.Hemoglobin.Joels57.conf.json
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo): time 0.001769/0.001769, allocations: 116.8 kB / 17.17 MB, free: 6.004 MB / 14.72 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo): time 0.002313/0.002313, allocations: 214.4 kB / 20.13 MB, free: 3.055 MB / 14.72 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo): time 1.521/1.521, allocations: 230.6 MB / 253.5 MB, free: 15.1 MB / 206.1 MB
"
[Timeout remaining time 178]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/package.mo): time 0.1436/0.1436, allocations: 23.86 MB / 333.4 MB, free: 1.215 MB / 254.1 MB
"
[Timeout remaining time 180]
Using package Chemical with version 2.0.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/package.mo)
Using package Modelica with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo)
Using package Complex with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo)
Using package ModelicaServices with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo)
Running command: "" <> buildModelFMU(Chemical.Obsolete.Examples.Hemoglobin.Joels57,fileNamePrefix="Chemical_Chemical_Obsolete_Examples_Hemoglobin_Joels57",fmuType="cs",version="2.0",platforms={"static"})
"" <> buildModelFMU(Chemical.Obsolete.Examples.Hemoglobin.Joels57,fileNamePrefix="Chemical_Chemical_Obsolete_Examples_Hemoglobin_Joels57",fmuType="cs",version="2.0",platforms={"static"}) [Timeout 660]
Thread is still alive.
"Notification: Chemical requested package Modelica of version 4.0.0. Modelica 4.1.0 is used instead which states that it is fully compatible without conversion script needed.
Notification: Performance of FrontEnd - loaded program: time 0.002024/0.002024, allocations: 67.5 kB / 466.7 MB, free: 30.77 MB / 350.1 MB
Notification: Performance of FrontEnd - Absyn->SCode: time 0.1168/0.1188, allocations: 59.83 MB / 0.5142 GB, free: 12.97 MB / 382.1 MB
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/Obsolete.mo:14337:7-14337:66:writable] Warning: An inner declaration for outer component system could not be found and was automatically generated.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/Obsolete.mo:14337:7-14337:66:writable] Notification: The diagnostics message for the missing inner is: 
Your model is using an outer \"system\" component but
an inner \"system\" component is not defined.
For simulation drag Modelica.Fluid.System into your model
to specify system properties.
Notification: Performance of NFInst.instantiate(Chemical.Obsolete.Examples.Hemoglobin.Joels57): time 0.5903/0.7091, allocations: 83.15 MB / 0.5954 GB, free: 328 kB / 446.1 MB
Notification: Performance of NFInst.instExpressions: time 0.2835/0.9926, allocations: 217.7 MB / 0.808 GB, free: 15.21 MB / 0.6075 GB
Notification: Performance of NFInst.updateImplicitVariability: time 0.0139/1.006, allocations: 226.2 kB / 0.8082 GB, free: 14.98 MB / 0.6075 GB
Notification: Performance of NFTyping.typeComponents: time 0.01736/1.024, allocations: 4.925 MB / 0.813 GB, free: 10.02 MB / 0.6075 GB
Notification: Performance of NFTyping.typeBindings: time 0.3951/1.419, allocations: 17.76 MB / 0.8303 GB, free: 8.828 MB / 0.6075 GB
Notification: Performance of NFTyping.typeClassSections: time 0.07413/1.493, allocations: 32.37 MB / 0.8619 GB, free: 8.66 MB / 0.6075 GB
Notification: Performance of NFFlatten.flatten: time 0.0821/1.575, allocations: 89.23 MB / 0.9491 GB, free: 14.13 MB / 0.6544 GB
Notification: Performance of NFFlatten.resolveConnections: time 0.1046/1.68, allocations: 61.24 MB / 1.009 GB, free: 3.332 MB / 0.7013 GB
Notification: Performance of NFEvalConstants.evaluate: time 0.09412/1.774, allocations: 56.5 MB / 1.064 GB, free: 11.61 MB / 0.7638 GB
Notification: Performance of NFSimplifyModel.simplify: time 0.8242/2.598, allocations: 52.02 MB / 1.115 GB, free: 75.86 MB / 0.7795 GB
Notification: Performance of NFPackage.collectConstants: time 0.03786/2.636, allocations: 12.2 MB / 1.127 GB, free: 75.86 MB / 0.7795 GB
Notification: Performance of NFFlatten.collectFunctions: time 0.1175/2.753, allocations: 35.45 MB / 1.161 GB, free: 75.86 MB / 0.7795 GB
Notification: Performance of NFScalarize.scalarize: time 0.05565/2.809, allocations: 24.01 MB / 1.185 GB, free: 75.86 MB / 0.7795 GB
Notification: Performance of NFVerifyModel.verify: time 0.08202/2.891, allocations: 40.57 MB / 1.224 GB, free: 56.79 MB / 0.7795 GB
Notification: Performance of NFConvertDAE.convert: time 0.2359/3.127, allocations: 159.5 MB / 1.38 GB, free: 15.31 MB / 0.8733 GB
Notification: Performance of FrontEnd - DAE generated: time 5.51e-06/3.127, allocations: 0 / 1.38 GB, free: 15.31 MB / 0.8733 GB
Notification: Performance of FrontEnd: time 1.452e-06/3.127, allocations: 0 / 1.38 GB, free: 15.31 MB / 0.8733 GB
Notification: Performance of Transformations before backend: time 0.00284/3.13, allocations: 0 / 1.38 GB, free: 15.31 MB / 0.8733 GB
Notification: Model statistics after passing the front-end and creating the data structures used by the back-end:
 * Number of equations: 11424
 * Number of variables: 11424
Notification: Performance of Generate backend data structure: time 0.8322/3.962, allocations: 71.79 MB / 1.45 GB, free: 317.2 MB / 0.8735 GB
Notification: Performance of prepare preOptimizeDAE: time 4.998e-05/3.962, allocations: 11.72 kB / 1.45 GB, free: 317.2 MB / 0.8735 GB
Notification: Performance of preOpt introduceOutputRealDerivatives (simulation): time 0.001079/3.963, allocations: 1.137 MB / 1.451 GB, free: 317.2 MB / 0.8735 GB
Notification: Performance of preOpt introduceOutputAliases (simulation): time 0.03801/4.001, allocations: 5.946 MB / 1.457 GB, free: 312.9 MB / 0.8735 GB
Notification: Performance of preOpt normalInlineFunction (simulation): time 0.08377/4.085, allocations: 11.94 MB / 1.469 GB, free: 307.6 MB / 0.8735 GB
Notification: Performance of preOpt evaluateParameters (simulation): time 0.09975/4.185, allocations: 41.28 MB / 1.509 GB, free: 276.1 MB / 0.8735 GB
Notification: Performance of preOpt simplifyIfEquations (simulation): time 0.006002/4.191, allocations: 6.432 MB / 1.516 GB, free: 269.1 MB / 0.8735 GB
Notification: Performance of preOpt expandDerOperator (simulation): time 0.0383/4.229, allocations: 4.6 MB / 1.52 GB, free: 264.5 MB / 0.8735 GB
Notification: Performance of preOpt clockPartitioning (simulation): time 0.2576/4.487, allocations: 112.8 MB / 1.63 GB, free: 151 MB / 0.8735 GB
Notification: Performance of preOpt findStateOrder (simulation): time 0.002132/4.489, allocations: 24.69 kB / 1.63 GB, free: 151 MB / 0.8735 GB
Notification: Performance of preOpt replaceEdgeChange (simulation): time 0.02821/4.517, allocations: 1.766 MB / 1.632 GB, free: 149.2 MB / 0.8735 GB
Notification: Performance of preOpt inlineArrayEqn (simulation): time 0.0006868/4.518, allocations: 1.055 MB / 1.633 GB, free: 148.2 MB / 0.8735 GB
Notification: Performance of preOpt removeEqualRHS (simulation): time 0.6085/5.126, allocations: 153.7 MB / 1.783 GB, free: 281.2 MB / 0.8735 GB
Warning: The model contains alias variables with redundant start and/or conflicting nominal values. It is recommended to resolve the conflicts, because otherwise the system could be hard to solve. To print the conflicting alias sets and the chosen candidates please use -d=aliasConflicts.
Notification: Performance of preOpt removeSimpleEquations (simulation): time 1.304/6.43, allocations: 436.4 MB / 2.209 GB, free: 211 MB / 0.8735 GB
Notification: Performance of preOpt comSubExp (simulation): time 2.604/9.034, allocations: 0.8136 GB / 3.023 GB, free: 176.9 MB / 0.8735 GB
Notification: Performance of preOpt resolveLoops (simulation): time 0.1047/9.139, allocations: 60.08 MB / 3.082 GB, free: 132 MB / 0.8735 GB
Notification: Performance of preOpt evalFunc (simulation): time 0.9187/10.06, allocations: 298.5 MB / 3.373 GB, free: 191.6 MB / 0.8735 GB
Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 0.0002092/10.06, allocations: 342.5 kB / 3.373 GB, free: 191.3 MB / 0.8735 GB
Notification: Performance of preOpt simplifyInStream (simulation): time 0.1074/10.17, allocations: 29.34 MB / 3.402 GB, free: 176.1 MB / 0.8735 GB
Notification: Performance of pre-optimization done (n=2985): time 0.0002017/10.17, allocations: 0.75 kB / 3.402 GB, free: 176.1 MB / 0.8735 GB
Notification: Performance of matching and sorting (n=3387): time 2.526/12.69, allocations: 424.5 MB / 3.816 GB, free: 66.2 MB / 0.8735 GB
Notification: Performance of inlineWhenForInitialization (initialization): time 0.0002513/12.69, allocations: 452.9 kB / 3.817 GB, free: 65.73 MB / 0.8735 GB
Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.4856/13.18, allocations: 32.15 MB / 3.848 GB, free: 253.8 MB / 0.8735 GB
Notification: Performance of collectPreVariables (initialization): time 0.01358/13.19, allocations: 0.5725 MB / 3.849 GB, free: 253.3 MB / 0.8735 GB
Notification: Performance of collectInitialEqns (initialization): time 0.01829/13.21, allocations: 21.73 MB / 3.87 GB, free: 241 MB / 0.8735 GB
Notification: Performance of collectInitialBindings (initialization): time 0.0253/13.23, allocations: 12.41 MB / 3.882 GB, free: 231.4 MB / 0.8735 GB
Notification: Performance of simplifyInitialFunctions (initialization): time 0.05049/13.28, allocations: 9.929 MB / 3.892 GB, free: 227.6 MB / 0.8735 GB
Notification: Performance of setup shared object (initialization): time 5.397e-05/13.28, allocations: 303.1 kB / 3.892 GB, free: 227.3 MB / 0.8735 GB
Notification: Performance of preBalanceInitialSystem (initialization): time 0.06876/13.35, allocations: 38.99 MB / 3.93 GB, free: 211.6 MB / 0.8735 GB
Notification: Performance of partitionIndependentBlocks (initialization): time 0.08115/13.43, allocations: 53.19 MB / 3.982 GB, free: 178.3 MB / 0.8735 GB
Notification: Performance of analyzeInitialSystem (initialization): time 0.1512/13.59, allocations: 96.31 MB / 4.076 GB, free: 98.94 MB / 0.8735 GB
Notification: Performance of solveInitialSystemEqSystem (initialization): time 0.0005108/13.59, allocations: 131.8 kB / 4.076 GB, free: 98.81 MB / 0.8735 GB
Notification: Performance of matching and sorting (n=5667) (initialization): time 1.801/15.39, allocations: 257.2 MB / 4.328 GB, free: 141 MB / 0.8735 GB
Notification: Performance of prepare postOptimizeDAE: time 0.0003646/15.39, allocations: 192 kB / 4.328 GB, free: 140.8 MB / 0.8735 GB
Notification: Performance of postOpt simplifyComplexFunction (initialization): time 0.0007269/15.39, allocations: 452.8 kB / 4.328 GB, free: 140.4 MB / 0.8735 GB
Notification: Performance of postOpt tearingSystem (initialization): time 0.1753/15.56, allocations: 73.72 MB / 4.4 GB, free: 66.95 MB / 0.8735 GB
Notification: Performance of postOpt solveSimpleEquations (initialization): time 0.0518/15.62, allocations: 11.18 MB / 4.411 GB, free: 56.47 MB / 0.8735 GB
Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 1.02/16.64, allocations: 315.1 MB / 4.719 GB, free: 69.65 MB / 0.8735 GB
Notification: Performance of postOpt simplifyAllExpressions (initialization): time 0.05406/16.69, allocations: 2.473 MB / 4.721 GB, free: 67.18 MB / 0.8735 GB
Notification: Performance of postOpt collapseArrayExpressions (initialization): time 0.01468/16.7, allocations: 2.799 MB / 4.724 GB, free: 64.38 MB / 0.8735 GB
Notification: Model statistics after passing the back-end for initialization:
 * Number of independent subsystems: 2031
 * Number of states: 0 ()
 * Number of discrete variables: 0 ()
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for initialization (5523):
 * Single equations (assignments): 5514
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 0
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 9
 * Mixed (continuous/discrete) equation systems: 0
Notification: Torn system details for strict tearing set:
 * Linear torn systems (#iteration vars, #inner vars, density): 6 systems
   {(1,3,100.0%), (33,10,82.4%), (1,3,100.0%), (33,10,82.4%), (1,3,100.0%), (33,10,82.4%)}
 * Non-linear torn systems (#iteration vars, #inner vars): 3 systems
   {(1,3), (1,3), (1,3)}
Notification: Performance of prepare postOptimizeDAE: time 0.04529/16.75, allocations: 18.35 MB / 4.742 GB, free: 46.42 MB / 0.8735 GB
Notification: Performance of postOpt lateInlineFunction (simulation): time 0.02298/16.77, allocations: 3.319 MB / 4.745 GB, free: 44.95 MB / 0.8735 GB
Notification: Performance of postOpt wrapFunctionCalls (simulation): time 1.252/18.02, allocations: 152.4 MB / 4.894 GB, free: 186.8 MB / 0.8735 GB
Notification: Performance of postOpt inlineArrayEqn (simulation): time 0.0003547/18.02, allocations: 357.7 kB / 4.894 GB, free: 186.8 MB / 0.8735 GB
Notification: Performance of postOpt constantLinearSystem (simulation): time 0.0004592/18.03, allocations: 54.94 kB / 4.894 GB, free: 186.8 MB / 0.8735 GB
Notification: Performance of postOpt simplifysemiLinear (simulation): time 0.001047/18.03, allocations: 177.6 kB / 4.895 GB, free: 186.8 MB / 0.8735 GB
Notification: Performance of postOpt removeSimpleEquations (simulation): time 1.394/19.42, allocations: 238 MB / 5.127 GB, free: 172.4 MB / 0.8735 GB
Notification: Performance of postOpt simplifyComplexFunction (simulation): time 0.000416/19.42, allocations: 11.62 kB / 5.127 GB, free: 172.4 MB / 0.8735 GB
Notification: Performance of postOpt solveSimpleEquations (simulation): time 0.04305/19.46, allocations: 7.252 MB / 5.134 GB, free: 172.1 MB / 0.8735 GB
Notification: Performance of postOpt tearingSystem (simulation): time 0.09801/19.56, allocations: 39.76 MB / 5.173 GB, free: 170.6 MB / 0.8735 GB
Notification: Performance of postOpt inputDerivativesUsed (simulation): time 0.01215/19.57, allocations: 1.447 MB / 5.174 GB, free: 170.6 MB / 0.8735 GB
Notification: Performance of postOpt calculateStrongComponentJacobians (simulation): time 0.3387/19.91, allocations: 159.6 MB / 5.33 GB, free: 104.1 MB / 0.8735 GB
Notification: Performance of postOpt calculateStateSetsJacobians (simulation): time 9.338e-06/19.91, allocations: 23.86 kB / 5.33 GB, free: 104.1 MB / 0.8735 GB
Notification: Performance of postOpt symbolicJacobian (simulation): time 1.354/21.27, allocations: 200.4 MB / 5.526 GB, free: 155.9 MB / 0.8735 GB
Notification: Performance of postOpt removeConstants (simulation): time 0.03442/21.3, allocations: 11.14 MB / 5.537 GB, free: 152.1 MB / 0.8735 GB
Notification: Performance of postOpt simplifyTimeIndepFuncCalls (simulation): time 0.01687/21.32, allocations: 0.922 MB / 5.538 GB, free: 151.5 MB / 0.8735 GB
Notification: Performance of postOpt simplifyAllExpressions (simulation): time 0.04261/21.36, allocations: 1.546 MB / 5.539 GB, free: 151 MB / 0.8735 GB
Notification: Performance of postOpt findZeroCrossings (simulation): time 0.02488/21.39, allocations: 4.55 MB / 5.544 GB, free: 150.3 MB / 0.8735 GB
Notification: Performance of postOpt collapseArrayExpressions (simulation): time 0.01023/21.4, allocations: 1.384 MB / 5.545 GB, free: 150.1 MB / 0.8735 GB
Notification: Performance of sorting global known variables: time 0.04082/21.44, allocations: 22.37 MB / 5.567 GB, free: 141.8 MB / 0.8735 GB
Notification: Performance of sort global known variables: time 1.81e-07/21.44, allocations: 0 / 5.567 GB, free: 141.8 MB / 0.8735 GB
Notification: Performance of remove unused functions: time 0.09162/21.53, allocations: 20.25 MB / 5.587 GB, free: 138.5 MB / 0.8735 GB
Notification: Model statistics after passing the back-end for simulation:
 * Number of independent subsystems: 45
 * Number of states: 180 (pCO2_2000.solution.temperature,pCO2_2000.O2_free.logn,pCO2_2000.H2O.logn,pCO2_2000.relaxed.OxyHm[1].logn,pCO2_2000.relaxed.OxyHm[2].logn,pCO2_2000.relaxed.OxyHm[3].logn,pCO2_2000.relaxed.OxyHm[4].logn,pCO2_2000.relaxed.DeoxyHm[1].logn,pCO2_2000.relaxed.DeoxyHm[2].logn,pCO2_2000.relaxed.DeoxyHm[3].logn,pCO2_2000.relaxed.DeoxyHm[4].logn,pCO2_2000.relaxed.HmAH[1].logn,pCO2_2000.relaxed.HmAH[2].logn,pCO2_2000.relaxed.HmAH[3].logn,pCO2_2000.relaxed.HmAH[4].logn,pCO2_2000.relaxed.HmA[1].logn,pCO2_2000.relaxed.HmA[2].logn,pCO2_2000.relaxed.HmA[3].logn,pCO2_2000.relaxed.HmA[4].logn,pCO2_2000.relaxed.HmNH3[1].logn,pCO2_2000.relaxed.HmNH3[2].logn,pCO2_2000.relaxed.HmNH3[3].logn,pCO2_2000.relaxed.HmNH3[4].logn,pCO2_2000.relaxed.HmNH2[1].logn,pCO2_2000.relaxed.HmNH2[2].logn,pCO2_2000.relaxed.HmNH2[3].logn,pCO2_2000.relaxed.HmNH2[4].logn,pCO2_2000.relaxed.HmNHCOO[1].logn,pCO2_2000.relaxed.HmNHCOO[2].logn,pCO2_2000.relaxed.HmNHCOO[3].logn,pCO2_2000.relaxed.HmNHCOO[4].logn,pCO2_2000.tensed.OxyHm[1].logn,pCO2_2000.tensed.OxyHm[2].logn,pCO2_2000.tensed.OxyHm[3].logn,pCO2_2000.tensed.OxyHm[4].logn,pCO2_2000.tensed.DeoxyHm[1].logn,pCO2_2000.tensed.DeoxyHm[2].logn,pCO2_2000.tensed.DeoxyHm[3].logn,pCO2_2000.tensed.DeoxyHm[4].logn,pCO2_2000.tensed.HmAH[1].logn,pCO2_2000.tensed.HmAH[2].logn,pCO2_2000.tensed.HmAH[3].logn,pCO2_2000.tensed.HmAH[4].logn,pCO2_2000.tensed.HmA[1].logn,pCO2_2000.tensed.HmA[2].logn,pCO2_2000.tensed.HmA[3].logn,pCO2_2000.tensed.HmA[4].logn,pCO2_2000.tensed.HmNH3[1].logn,pCO2_2000.tensed.HmNH3[2].logn,pCO2_2000.tensed.HmNH3[3].logn,pCO2_2000.tensed.HmNH3[4].logn,pCO2_2000.tensed.HmNH2[1].logn,pCO2_2000.tensed.HmNH2[2].logn,pCO2_2000.tensed.HmNH2[3].logn,pCO2_2000.tensed.HmNH2[4].logn,pCO2_2000.tensed.HmNHCOO[1].logn,pCO2_2000.tensed.HmNHCOO[2].logn,pCO2_2000.tensed.HmNHCOO[3].logn,pCO2_2000.tensed.HmNHCOO[4].logn,pCO2_2000.CO2_free.logn,pCO2_5330.solution.temperature,pCO2_5330.O2_free.logn,pCO2_5330.H2O.logn,pCO2_5330.relaxed.OxyHm[1].logn,pCO2_5330.relaxed.OxyHm[2].logn,pCO2_5330.relaxed.OxyHm[3].logn,pCO2_5330.relaxed.OxyHm[4].logn,pCO2_5330.relaxed.DeoxyHm[1].logn,pCO2_5330.relaxed.DeoxyHm[2].logn,pCO2_5330.relaxed.DeoxyHm[3].logn,pCO2_5330.relaxed.DeoxyHm[4].logn,pCO2_5330.relaxed.HmAH[1].logn,pCO2_5330.relaxed.HmAH[2].logn,pCO2_5330.relaxed.HmAH[3].logn,pCO2_5330.relaxed.HmAH[4].logn,pCO2_5330.relaxed.HmA[1].logn,pCO2_5330.relaxed.HmA[2].logn,pCO2_5330.relaxed.HmA[3].logn,pCO2_5330.relaxed.HmA[4].logn,pCO2_5330.relaxed.HmNH3[1].logn,pCO2_5330.relaxed.HmNH3[2].logn,pCO2_5330.relaxed.HmNH3[3].logn,pCO2_5330.relaxed.HmNH3[4].logn,pCO2_5330.relaxed.HmNH2[1].logn,pCO2_5330.relaxed.HmNH2[2].logn,pCO2_5330.relaxed.HmNH2[3].logn,pCO2_5330.relaxed.HmNH2[4].logn,pCO2_5330.relaxed.HmNHCOO[1].logn,pCO2_5330.relaxed.HmNHCOO[2].logn,pCO2_5330.relaxed.HmNHCOO[3].logn,pCO2_5330.relaxed.HmNHCOO[4].logn,pCO2_5330.tensed.OxyHm[1].logn,pCO2_5330.tensed.OxyHm[2].logn,pCO2_5330.tensed.OxyHm[3].logn,pCO2_5330.tensed.OxyHm[4].logn,pCO2_5330.tensed.DeoxyHm[1].logn,pCO2_5330.tensed.DeoxyHm[2].logn,pCO2_5330.tensed.DeoxyHm[3].logn,pCO2_5330.tensed.DeoxyHm[4].logn,pCO2_5330.tensed.HmAH[1].logn,pCO2_5330.tensed.HmAH[2].logn,pCO2_5330.tensed.HmAH[3].logn,pCO2_5330.tensed.HmAH[4].logn,pCO2_5330.tensed.HmA[1].logn,pCO2_5330.tensed.HmA[2].logn,pCO2_5330.tensed.HmA[3].logn,pCO2_5330.tensed.HmA[4].logn,pCO2_5330.tensed.HmNH3[1].logn,pCO2_5330.tensed.HmNH3[2].logn,pCO2_5330.tensed.HmNH3[3].logn,pCO2_5330.tensed.HmNH3[4].logn,pCO2_5330.tensed.HmNH2[1].logn,pCO2_5330.tensed.HmNH2[2].logn,pCO2_5330.tensed.HmNH2[3].logn,pCO2_5330.tensed.HmNH2[4].logn,pCO2_5330.tensed.HmNHCOO[1].logn,pCO2_5330.tensed.HmNHCOO[2].logn,pCO2_5330.tensed.HmNHCOO[3].logn,pCO2_5330.tensed.HmNHCOO[4].logn,pCO2_5330.CO2_free.logn,pCO2_9330.solution.temperature,pCO2_9330.O2_free.logn,pCO2_9330.H2O.logn,pCO2_9330.relaxed.OxyHm[1].logn,pCO2_9330.relaxed.OxyHm[2].logn,pCO2_9330.relaxed.OxyHm[3].logn,pCO2_9330.relaxed.OxyHm[4].logn,pCO2_9330.relaxed.DeoxyHm[1].logn,pCO2_9330.relaxed.DeoxyHm[2].logn,pCO2_9330.relaxed.DeoxyHm[3].logn,pCO2_9330.relaxed.DeoxyHm[4].logn,pCO2_9330.relaxed.HmAH[1].logn,pCO2_9330.relaxed.HmAH[2].logn,pCO2_9330.relaxed.HmAH[3].logn,pCO2_9330.relaxed.HmAH[4].logn,pCO2_9330.relaxed.HmA[1].logn,pCO2_9330.relaxed.HmA[2].logn,pCO2_9330.relaxed.HmA[3].logn,pCO2_9330.relaxed.HmA[4].logn,pCO2_9330.relaxed.HmNH3[1].logn,pCO2_9330.relaxed.HmNH3[2].logn,pCO2_9330.relaxed.HmNH3[3].logn,pCO2_9330.relaxed.HmNH3[4].logn,pCO2_9330.relaxed.HmNH2[1].logn,pCO2_9330.relaxed.HmNH2[2].logn,pCO2_9330.relaxed.HmNH2[3].logn,pCO2_9330.relaxed.HmNH2[4].logn,pCO2_9330.relaxed.HmNHCOO[1].logn,pCO2_9330.relaxed.HmNHCOO[2].logn,pCO2_9330.relaxed.HmNHCOO[3].logn,pCO2_9330.relaxed.HmNHCOO[4].logn,pCO2_9330.tensed.OxyHm[1].logn,pCO2_9330.tensed.OxyHm[2].logn,pCO2_9330.tensed.OxyHm[3].logn,pCO2_9330.tensed.OxyHm[4].logn,pCO2_9330.tensed.DeoxyHm[1].logn,pCO2_9330.tensed.DeoxyHm[2].logn,pCO2_9330.tensed.DeoxyHm[3].logn,pCO2_9330.tensed.DeoxyHm[4].logn,pCO2_9330.tensed.HmAH[1].logn,pCO2_9330.tensed.HmAH[2].logn,pCO2_9330.tensed.HmAH[3].logn,pCO2_9330.tensed.HmAH[4].logn,pCO2_9330.tensed.HmA[1].logn,pCO2_9330.tensed.HmA[2].logn,pCO2_9330.tensed.HmA[3].logn,pCO2_9330.tensed.HmA[4].logn,pCO2_9330.tensed.HmNH3[1].logn,pCO2_9330.tensed.HmNH3[2].logn,pCO2_9330.tensed.HmNH3[3].logn,pCO2_9330.tensed.HmNH3[4].logn,pCO2_9330.tensed.HmNH2[1].logn,pCO2_9330.tensed.HmNH2[2].logn,pCO2_9330.tensed.HmNH2[3].logn,pCO2_9330.tensed.HmNH2[4].logn,pCO2_9330.tensed.HmNHCOO[1].logn,pCO2_9330.tensed.HmNHCOO[2].logn,pCO2_9330.tensed.HmNHCOO[3].logn,pCO2_9330.tensed.HmNHCOO[4].logn,pCO2_9330.CO2_free.logn)
 * Number of discrete variables: 0 ()
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for simulation (3702):
 * Single equations (assignments): 3693
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 0
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 9
 * Mixed (continuous/discrete) equation systems: 0
Notification: Torn system details for strict tearing set:
 * Linear torn systems (#iteration vars, #inner vars, density): 6 systems
   {(1,3,100.0%), (33,10,82.4%), (1,3,100.0%), (33,10,82.4%), (1,3,100.0%), (33,10,82.4%)}
 * Non-linear torn systems (#iteration vars, #inner vars): 3 systems
   {(1,3), (1,3), (1,3)}
Notification: Performance of Backend phase and start with SimCode phase: time 1.34/22.87, allocations: 211.9 MB / 5.794 GB, free: 200.7 MB / 0.8892 GB
Notification: Performance of simCode: created initialization part: time 0.2105/23.08, allocations: 85.25 MB / 5.877 GB, free: 175.8 MB / 0.8892 GB
Notification: Performance of simCode: created event and clocks part: time 1.303e-05/23.08, allocations: 2.844 kB / 5.877 GB, free: 175.8 MB / 0.8892 GB
Notification: Performance of simCode: created simulation system equations: time 0.1346/23.21, allocations: 54.53 MB / 5.93 GB, free: 154.2 MB / 0.8892 GB
Notification: Performance of simCode: created of all other equations (e.g. parameter, nominal, assert, etc): time 0.06515/23.28, allocations: 7.82 MB / 5.938 GB, free: 151.1 MB / 0.8892 GB
Notification: Performance of simCode: created linear, non-linear and system jacobian parts: time 4.567/27.85, allocations: 0.8504 GB / 6.788 GB, free: 229 MB / 0.9204 GB
Notification: Performance of simCode: some other stuff during SimCode phase: time 0.04845/27.89, allocations: 30.6 MB / 6.818 GB, free: 226.7 MB / 0.9204 GB
Notification: Performance of simCode: alias equations: time 0.05524/27.95, allocations: 15.63 MB / 6.833 GB, free: 226.3 MB / 0.9204 GB
Notification: Performance of simCode: all other stuff during SimCode phase: time 0.0501/28, allocations: 22.84 MB / 6.856 GB, free: 219.7 MB / 0.9204 GB
Notification: Performance of SimCode: time 1.463e-06/28, allocations: 0 / 6.856 GB, free: 219.7 MB / 0.9204 GB
Notification: Performance of buildModelFMU: Generate the FMI files: time 3.25/31.25, allocations: 1.387 GB / 8.242 GB, free: 125.6 MB / 0.936 GB
Error: Error building simulator. Build log: cmd: cd 'Chemical_Chemical_Obsolete_Examples_Hemoglobin_Joels57.fmutmp/sources/' && mkdir build_cmake_static && cd build_cmake_static && cmake -DCMAKE_BUILD_TYPE=Release -DCMAKE_C_COMPILER='clang' .. && cmake --build . --parallel -j1 --target install && cd .. && rm -rf build_cmake_static
-- The C compiler identification is Clang 14.0.0
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Check for working C compiler: /usr/bin/clang - skipped
-- Detecting C compile features
-- Detecting C compile features - done
-- FMI2 include directory: /var/lib/jenkins1/ws/OpenModelicaLibraryTestingWork/OpenModelica/OMCompiler/build/bin/../include/omc/c/fmi
-- Looking for pthread.h
-- Looking for pthread.h - found
-- Performing Test CMAKE_HAVE_LIBC_PTHREAD
-- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Success
-- Found Threads: TRUE  
-- Building for FMI platform linux64
-- Install directory: /var/lib/jenkins1/ws/OpenModelicaLibraryTestingWork/OpenModelicaLibraryTesting/Chemical_Chemical.Obsolete.Examples.Hemoglobin.Joels57/Chemical_Chemical_Obsolete_Examples_Hemoglobin_Joels57.fmutmp/sources/../binaries/linux64
-- CVODE_DIRECTORY: /var/lib/jenkins1/ws/OpenModelicaLibraryTestingWork/OpenModelica/OMCompiler/build/bin/../lib/x86_64-linux-gnu/omc
-- SUNDIALS_CVODE_LIBRARY: /var/lib/jenkins1/ws/OpenModelicaLibraryTestingWork/OpenModelica/OMCompiler/build/lib/x86_64-linux-gnu/omc/libsundials_cvode.so
-- SUNDIALS_NVECSERIAL_LIBRARY: /var/lib/jenkins1/ws/OpenModelicaLibraryTestingWork/OpenModelica/OMCompiler/build/lib/x86_64-linux-gnu/omc/libsundials_nvecserial.so
-- CVODE: /var/lib/jenkins1/ws/OpenModelicaLibraryTestingWork/OpenModelica/OMCompiler/build/lib/x86_64-linux-gnu/omc/libsundials_nvecserial.so /var/lib/jenkins1/ws/OpenModelicaLibraryTestingWork/OpenModelica/OMCompiler/build/lib/x86_64-linux-gnu/omc/libsundials_cvode.so
-- Not using FMI2_FUNCTION_PREFIX
-- Installing dynamic dependencies from list: /var/lib/jenkins1/ws/OpenModelicaLibraryTestingWork/OpenModelica/OMCompiler/build/lib/x86_64-linux-gnu/omc/libsundials_cvode.so;/var/lib/jenkins1/ws/OpenModelicaLibraryTestingWork/OpenModelica/OMCompiler/build/lib/x86_64-linux-gnu/omc/libsundials_nvecserial.so
-- Configuring done
-- Generating done
-- Build files have been written to: /var/lib/jenkins1/ws/OpenModelicaLibraryTestingWork/OpenModelicaLibraryTesting/Chemical_Chemical.Obsolete.Examples.Hemoglobin.Joels57/Chemical_Chemical_Obsolete_Examples_Hemoglobin_Joels57.fmutmp/sources/build_cmake_static
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gmake[2]: *** [CMakeFiles/Chemical_Chemical_Obsolete_Examples_Hemoglobin_Joels57.dir/build.make:1812: CMakeFiles/Chemical_Chemical_Obsolete_Examples_Hemoglobin_Joels57.dir/Chemical_Chemical_Obsolete_Examples_Hemoglobin_Joels57_init_fmu.c.o] Interrupt
gmake[1]: *** [CMakeFiles/Makefile2:84: CMakeFiles/Chemical_Chemical_Obsolete_Examples_Hemoglobin_Joels57.dir/all] Interrupt
gmake: *** [Makefile:136: all] Interrupt
"
[Timeout remaining time 0]
Timeout error for cmd: "" <> buildModelFMU(Chemical.Obsolete.Examples.Hemoglobin.Joels57,fileNamePrefix="Chemical_Chemical_Obsolete_Examples_Hemoglobin_Joels57",fmuType="cs",version="2.0",platforms={"static"})
Failed to read output from testmodel.py, exit status != 0:
Traceback (most recent call last):
  File "/var/lib/jenkins1/ws/OpenModelicaLibraryTestingWork/OpenModelicaLibraryTesting/./testmodel.py", line 410, in <module>
    res=sendExpressionTimeout(omc, cmd, conf["ulimitOmc"])
  File "/var/lib/jenkins1/ws/OpenModelicaLibraryTestingWork/OpenModelicaLibraryTesting/./testmodel.py", line 144, in sendExpressionTimeout
    raise TimeoutError(res[1])
__main__.TimeoutError

During handling of the above exception, another exception occurred:

Traceback (most recent call last):
  File "/var/lib/jenkins1/ws/OpenModelicaLibraryTestingWork/OpenModelicaLibraryTesting/./testmodel.py", line 424, in <module>
    writeResultAndExit(0, omc, omc_new)
NameError: name 'omc' is not defined