Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr Physiolibrary_Physiolibrary.Organs.Lungs.Examples.MeanLungsTest.conf.json loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0/package.mo): time 0.09063/0.09063, allocations: 15.52 MB / 32.54 MB, free: 3.477 MB / 26.18 MB " [Timeout remaining time 180] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.0.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.0.0+maint.om/package.mo): time 0.001252/0.001252, allocations: 111.4 kB / 39.78 MB, free: 1.125 MB / 26.18 MB " [Timeout remaining time 180] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.0.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.0.0+maint.om/package.mo): time 0.001556/0.001556, allocations: 200.9 kB / 47.14 MB, free: 2.488 MB / 34.91 MB " [Timeout remaining time 180] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.0.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.0.0+maint.om/package.mo): time 1.43/1.43, allocations: 225.6 MB / 280 MB, free: 15.35 MB / 222.1 MB " [Timeout remaining time 178] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 3.0.0/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 3.0.0/package.mo): time 0.144/0.144, allocations: 23.72 MB / 362.9 MB, free: 0.7891 MB / 270.1 MB " [Timeout remaining time 180] Using package Physiolibrary with version 3.0.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 3.0.0/package.mo) Using package Modelica with version 4.0.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.0.0+maint.om/package.mo) Using package Complex with version 4.0.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.0.0+maint.om/package.mo) Using package ModelicaServices with version 4.0.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.0.0+maint.om/package.mo) Using package Chemical with version 1.4.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0/package.mo) Running command: translateModel(Physiolibrary.Organs.Lungs.Examples.MeanLungsTest,tolerance=1e-06,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Physiolibrary_Physiolibrary.Organs.Lungs.Examples.MeanLungsTest") translateModel(Physiolibrary.Organs.Lungs.Examples.MeanLungsTest,tolerance=1e-06,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Physiolibrary_Physiolibrary.Organs.Lungs.Examples.MeanLungsTest") [Timeout 660] "Notification: Performance of FrontEnd - loaded program: time 0.003245/0.003245, allocations: 123.8 kB / 0.4919 GB, free: 24.66 MB / 350.1 MB Notification: Performance of FrontEnd - Absyn->SCode: time 0.09438/0.09763, allocations: 62.64 MB / 0.5531 GB, free: 9.906 MB / 398.1 MB Notification: Performance of NFInst.instantiate(Physiolibrary.Organs.Lungs.Examples.MeanLungsTest): time 0.3769/0.4745, allocations: 128.1 MB / 0.6782 GB, free: 6.402 MB / 478.1 MB Notification: Performance of NFInst.instExpressions: time 0.09625/0.5708, allocations: 70.15 MB / 0.7467 GB, free: 12 kB / 0.5294 GB Notification: Performance of NFInst.updateImplicitVariability: time 0.004903/0.5757, allocations: 71.8 kB / 0.7468 GB, free: 15.94 MB / 0.545 GB Notification: Performance of NFTyping.typeComponents: time 0.004855/0.5805, allocations: 1.339 MB / 0.7481 GB, free: 14.59 MB / 0.545 GB Notification: Performance of NFTyping.typeBindings: time 0.02268/0.6032, allocations: 8.02 MB / 0.7559 GB, free: 6.543 MB / 0.545 GB Notification: Performance of NFTyping.typeClassSections: time 0.01791/0.6211, allocations: 7.22 MB / 0.763 GB, free: 15.29 MB / 0.5606 GB Notification: Performance of NFFlatten.flatten: time 0.6629/1.284, allocations: 75.54 MB / 0.8368 GB, free: 7.562 MB / 0.6075 GB Notification: Performance of NFFlatten.resolveConnections: time 0.1782/1.462, allocations: 114.6 MB / 0.9487 GB, free: 4.676 MB / 0.6388 GB Notification: Performance of NFEvalConstants.evaluate: time 0.6743/2.137, allocations: 129.1 MB / 1.075 GB, free: 15.2 MB / 0.7638 GB Notification: Performance of NFSimplifyModel.simplify: time 3.42/5.557, allocations: 373 MB / 1.439 GB, free: 144.6 MB / 0.8264 GB Notification: Performance of NFPackage.collectConstants: time 0.05166/5.609, allocations: 16.74 MB / 1.455 GB, free: 144.6 MB / 0.8264 GB Notification: Performance of NFFlatten.collectFunctions: time 2.222/7.831, allocations: 270.4 MB / 1.719 GB, free: 208.1 MB / 0.8577 GB Notification: Performance of NFScalarize.scalarize: time 0.08281/7.914, allocations: 60.28 MB / 1.778 GB, free: 208 MB / 0.8577 GB Notification: Performance of NFVerifyModel.verify: time 0.1318/8.046, allocations: 70.25 MB / 1.847 GB, free: 169.2 MB / 0.8577 GB Notification: Performance of NFConvertDAE.convert: time 1.075/9.121, allocations: 245.1 MB / 2.086 GB, free: 56.89 MB / 0.8579 GB Notification: Performance of FrontEnd - DAE generated: time 7.985e-06/9.121, allocations: 3.688 kB / 2.086 GB, free: 56.89 MB / 0.8579 GB Notification: Performance of FrontEnd: time 1.794e-06/9.121, allocations: 0 / 2.086 GB, free: 56.89 MB / 0.8579 GB Notification: Performance of Transformations before backend: time 0.005373/9.126, allocations: 0 / 2.086 GB, free: 56.89 MB / 0.8579 GB Notification: Model statistics after passing the front-end and creating the data structures used by the back-end: * Number of equations: 21641 * Number of variables: 21641 Notification: Performance of Generate backend data structure: time 0.44/9.566, allocations: 105.5 MB / 2.189 GB, free: 5.723 MB / 0.8579 GB Notification: Performance of prepare preOptimizeDAE: time 5.852e-05/9.566, allocations: 8.031 kB / 2.189 GB, free: 5.715 MB / 0.8579 GB Notification: Performance of preOpt normalInlineFunction (simulation): time 0.09141/9.658, allocations: 11.27 MB / 2.2 GB, free: 11.14 MB / 0.8735 GB Notification: Performance of preOpt evaluateParameters (simulation): time 0.1995/9.857, allocations: 66.47 MB / 2.265 GB, free: 14.55 MB / 0.936 GB Notification: Performance of preOpt simplifyIfEquations (simulation): time 0.01482/9.872, allocations: 8.212 MB / 2.273 GB, free: 6.344 MB / 0.936 GB Notification: Performance of preOpt expandDerOperator (simulation): time 0.06478/9.937, allocations: 7.367 MB / 2.28 GB, free: 14.98 MB / 0.9517 GB Notification: Performance of preOpt clockPartitioning (simulation): time 1.222/11.16, allocations: 264.3 MB / 2.538 GB, free: 364.6 MB / 1.092 GB Notification: Performance of preOpt findStateOrder (simulation): time 0.003342/11.16, allocations: 176.4 kB / 2.539 GB, free: 364.5 MB / 1.092 GB Notification: Performance of preOpt replaceEdgeChange (simulation): time 0.05319/11.22, allocations: 2.946 MB / 2.541 GB, free: 362.2 MB / 1.092 GB Notification: Performance of preOpt inlineArrayEqn (simulation): time 0.007051/11.22, allocations: 5.021 MB / 2.546 GB, free: 360.9 MB / 1.092 GB Notification: Performance of preOpt removeEqualRHS (simulation): time 0.673/11.9, allocations: 400.9 MB / 2.938 GB, free: 1.684 MB / 1.092 GB Warning: The model contains alias variables with redundant start and/or conflicting nominal values. It is recommended to resolve the conflicts, because otherwise the system could be hard to solve. To print the conflicting alias sets and the chosen candidates please use -d=aliasConflicts. Notification: Performance of preOpt removeSimpleEquations (simulation): time 2.238/14.13, allocations: 0.8712 GB / 3.809 GB, free: 72.4 MB / 1.092 GB Notification: Performance of preOpt comSubExp (simulation): time 0.6514/14.78, allocations: 166.8 MB / 3.972 GB, free: 328.5 MB / 1.092 GB Notification: Performance of preOpt resolveLoops (simulation): time 0.1831/14.97, allocations: 127 MB / 4.096 GB, free: 275.5 MB / 1.092 GB Notification: Performance of preOpt evalFunc (simulation): time 1.055/16.02, allocations: 435.7 MB / 4.521 GB, free: 233.5 MB / 1.092 GB Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 0.0003566/16.02, allocations: 0.6439 MB / 4.522 GB, free: 233.1 MB / 1.092 GB Notification: Performance of preOpt simplifyInStream (simulation): time 0.1152/16.14, allocations: 34.77 MB / 4.556 GB, free: 226.7 MB / 1.092 GB Notification: Performance of pre-optimization done (n=8137): time 0.0001617/16.14, allocations: 1.219 kB / 4.556 GB, free: 226.7 MB / 1.092 GB Notification: Performance of matching and sorting (n=8137): time 1.402/17.54, allocations: 465 MB / 5.01 GB, free: 196.4 MB / 1.092 GB Notification: Performance of inlineWhenForInitialization (initialization): time 0.0003163/17.54, allocations: 0.6591 MB / 5.011 GB, free: 195.7 MB / 1.092 GB Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.08411/17.62, allocations: 47.16 MB / 5.057 GB, free: 148.9 MB / 1.092 GB Notification: Performance of collectPreVariables (initialization): time 0.02102/17.65, allocations: 1.041 MB / 5.058 GB, free: 147.9 MB / 1.092 GB Notification: Performance of collectInitialEqns (initialization): time 0.02102/17.67, allocations: 30.69 MB / 5.088 GB, free: 117.3 MB / 1.092 GB Notification: Performance of collectInitialBindings (initialization): time 0.4706/18.14, allocations: 29.52 MB / 5.117 GB, free: 339.2 MB / 1.092 GB Notification: Performance of simplifyInitialFunctions (initialization): time 0.1018/18.24, allocations: 21.38 MB / 5.138 GB, free: 338.2 MB / 1.092 GB Notification: Performance of setup shared object (initialization): time 4.806e-05/18.24, allocations: 301.1 kB / 5.138 GB, free: 337.9 MB / 1.092 GB Notification: Performance of preBalanceInitialSystem (initialization): time 0.2041/18.44, allocations: 134.3 MB / 5.269 GB, free: 290.6 MB / 1.092 GB Notification: Performance of partitionIndependentBlocks (initialization): time 0.2126/18.66, allocations: 160.1 MB / 5.425 GB, free: 164.3 MB / 1.092 GB Error: Initialization problem is structural singular. Please, check the initial conditions. Notification: Performance of analyzeInitialSystem (initialization): time 9.027/27.68, allocations: 1.316 GB / 6.742 GB, free: 262.6 MB / 1.092 GB Notification: Performance of solveInitialSystemEqSystem (initialization): time 0.000813/27.68, allocations: 219.2 kB / 6.742 GB, free: 262.6 MB / 1.092 GB Notification: Performance of matching and sorting (n=12314) (initialization): time 1.2/28.88, allocations: 336.1 MB / 7.07 GB, free: 249.5 MB / 1.092 GB Notification: Performance of prepare postOptimizeDAE: time 0.0006548/28.88, allocations: 336.8 kB / 7.07 GB, free: 249.5 MB / 1.092 GB Notification: Performance of postOpt simplifyComplexFunction (initialization): time 0.001287/28.89, allocations: 0.7489 MB / 7.071 GB, free: 249.5 MB / 1.092 GB Notification: Performance of postOpt tearingSystem (initialization): time 1.331/30.22, allocations: 224.3 MB / 7.29 GB, free: 188.7 MB / 1.092 GB Notification: Performance of postOpt solveSimpleEquations (initialization): time 0.08771/30.3, allocations: 20.79 MB / 7.31 GB, free: 169.7 MB / 1.092 GB Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 0.08773/30.39, allocations: 90.89 MB / 7.399 GB, free: 83.23 MB / 1.092 GB Notification: Performance of postOpt simplifyAllExpressions (initialization): time 0.08811/30.48, allocations: 5.948 MB / 7.405 GB, free: 77.43 MB / 1.092 GB Notification: Performance of postOpt collapseArrayExpressions (initialization): time 0.0285/30.51, allocations: 6.668 MB / 7.412 GB, free: 70.76 MB / 1.092 GB Warning: Assuming fixed start value for the following 36 variables: lungs.pulmArty.extraSubstanceAmounts[1]:VARIABLE(start = lungs.pulmArty.tm_start * lungs.pulmArty.C_start[1] fixed = true ) \"Current amount of extra substances\" type: Real [3] lungs.pulmArty.extraSubstanceAmounts[2]:VARIABLE(start = lungs.pulmArty.tm_start * lungs.pulmArty.C_start[2] fixed = true ) \"Current amount of extra substances\" type: Real [3] lungs.pulmArty.extraSubstanceAmounts[3]:VARIABLE(start = lungs.pulmArty.tm_start * lungs.pulmArty.C_start[3] fixed = true ) \"Current amount of extra substances\" type: Real [3] lungs.pulmVeins.extraSubstanceAmounts[1]:VARIABLE(start = lungs.pulmVeins.tm_start * lungs.pulmVeins.C_start[1] fixed = true ) \"Current amount of extra substances\" type: Real [3] lungs.pulmVeins.extraSubstanceAmounts[2]:VARIABLE(start = lungs.pulmVeins.tm_start * lungs.pulmVeins.C_start[2] fixed = true ) \"Current amount of extra substances\" type: Real [3] lungs.pulmVeins.extraSubstanceAmounts[3]:VARIABLE(start = lungs.pulmVeins.tm_start * lungs.pulmVeins.C_start[3] fixed = true ) \"Current amount of extra substances\" type: Real [3] lungs.respiratoryUnit[1].pulmCapysVentilated.extraSubstanceAmounts[1]:VARIABLE(start = lungs.respiratoryUnit[1].pulmCapysVentilated.tm_start * lungs.respiratoryUnit[1].pulmCapysVentilated.C_start[1] fixed = true ) \"Current amount of extra substances\" type: Real [10,3] lungs.respiratoryUnit[1].pulmCapysVentilated.extraSubstanceAmounts[2]:VARIABLE(start = lungs.respiratoryUnit[1].pulmCapysVentilated.tm_start * lungs.respiratoryUnit[1].pulmCapysVentilated.C_start[2] fixed = true ) \"Current amount of extra substances\" type: Real [10,3] lungs.respiratoryUnit[1].pulmCapysVentilated.extraSubstanceAmounts[3]:VARIABLE(start = lungs.respiratoryUnit[1].pulmCapysVentilated.tm_start * lungs.respiratoryUnit[1].pulmCapysVentilated.C_start[3] fixed = true ) \"Current amount of extra substances\" type: Real [10,3] lungs.respiratoryUnit[2].pulmCapysVentilated.extraSubstanceAmounts[1]:VARIABLE(start = lungs.respiratoryUnit[2].pulmCapysVentilated.tm_start * lungs.respiratoryUnit[2].pulmCapysVentilated.C_start[1] fixed = true ) \"Current amount of extra substances\" type: Real [10,3] lungs.respiratoryUnit[2].pulmCapysVentilated.extraSubstanceAmounts[2]:VARIABLE(start = lungs.respiratoryUnit[2].pulmCapysVentilated.tm_start * lungs.respiratoryUnit[2].pulmCapysVentilated.C_start[2] fixed = true ) \"Current amount of extra substances\" type: Real [10,3] lungs.respiratoryUnit[2].pulmCapysVentilated.extraSubstanceAmounts[3]:VARIABLE(start = lungs.respiratoryUnit[2].pulmCapysVentilated.tm_start * lungs.respiratoryUnit[2].pulmCapysVentilated.C_start[3] fixed = true ) \"Current amount of extra substances\" type: Real [10,3] lungs.respiratoryUnit[3].pulmCapysVentilated.extraSubstanceAmounts[1]:VARIABLE(start = lungs.respiratoryUnit[3].pulmCapysVentilated.tm_start * lungs.respiratoryUnit[3].pulmCapysVentilated.C_start[1] fixed = true ) \"Current amount of extra substances\" type: Real [10,3] lungs.respiratoryUnit[3].pulmCapysVentilated.extraSubstanceAmounts[2]:VARIABLE(start = lungs.respiratoryUnit[3].pulmCapysVentilated.tm_start * lungs.respiratoryUnit[3].pulmCapysVentilated.C_start[2] fixed = true ) \"Current amount of extra substances\" type: Real [10,3] lungs.respiratoryUnit[3].pulmCapysVentilated.extraSubstanceAmounts[3]:VARIABLE(start = lungs.respiratoryUnit[3].pulmCapysVentilated.tm_start * lungs.respiratoryUnit[3].pulmCapysVentilated.C_start[3] fixed = true ) \"Current amount of extra substances\" type: Real [10,3] lungs.respiratoryUnit[4].pulmCapysVentilated.extraSubstanceAmounts[1]:VARIABLE(start = lungs.respiratoryUnit[4].pulmCapysVentilated.tm_start * lungs.respiratoryUnit[4].pulmCapysVentilated.C_start[1] fixed = true ) \"Current amount of extra substances\" type: Real [10,3] lungs.respiratoryUnit[4].pulmCapysVentilated.extraSubstanceAmounts[2]:VARIABLE(start = lungs.respiratoryUnit[4].pulmCapysVentilated.tm_start * lungs.respiratoryUnit[4].pulmCapysVentilated.C_start[2] fixed = true ) \"Current amount of extra substances\" type: Real [10,3] lungs.respiratoryUnit[4].pulmCapysVentilated.extraSubstanceAmounts[3]:VARIABLE(start = lungs.respiratoryUnit[4].pulmCapysVentilated.tm_start * lungs.respiratoryUnit[4].pulmCapysVentilated.C_start[3] fixed = true ) \"Current amount of extra substances\" type: Real [10,3] lungs.respiratoryUnit[5].pulmCapysVentilated.extraSubstanceAmounts[1]:VARIABLE(start = lungs.respiratoryUnit[5].pulmCapysVentilated.tm_start * lungs.respiratoryUnit[5].pulmCapysVentilated.C_start[1] fixed = true ) \"Current amount of extra substances\" type: Real [10,3] lungs.respiratoryUnit[5].pulmCapysVentilated.extraSubstanceAmounts[2]:VARIABLE(start = lungs.respiratoryUnit[5].pulmCapysVentilated.tm_start * lungs.respiratoryUnit[5].pulmCapysVentilated.C_start[2] fixed = true ) \"Current amount of extra substances\" type: Real [10,3] lungs.respiratoryUnit[5].pulmCapysVentilated.extraSubstanceAmounts[3]:VARIABLE(start = lungs.respiratoryUnit[5].pulmCapysVentilated.tm_start * lungs.respiratoryUnit[5].pulmCapysVentilated.C_start[3] fixed = true ) \"Current amount of extra substances\" type: Real [10,3] lungs.respiratoryUnit[6].pulmCapysVentilated.extraSubstanceAmounts[1]:VARIABLE(start = lungs.respiratoryUnit[6].pulmCapysVentilated.tm_start * lungs.respiratoryUnit[6].pulmCapysVentilated.C_start[1] fixed = true ) \"Current amount of extra substances\" type: Real [10,3] lungs.respiratoryUnit[6].pulmCapysVentilated.extraSubstanceAmounts[2]:VARIABLE(start = lungs.respiratoryUnit[6].pulmCapysVentilated.tm_start * lungs.respiratoryUnit[6].pulmCapysVentilated.C_start[2] fixed = true ) \"Current amount of extra substances\" type: Real [10,3] lungs.respiratoryUnit[6].pulmCapysVentilated.extraSubstanceAmounts[3]:VARIABLE(start = lungs.respiratoryUnit[6].pulmCapysVentilated.tm_start * lungs.respiratoryUnit[6].pulmCapysVentilated.C_start[3] fixed = true ) \"Current amount of extra substances\" type: Real [10,3] lungs.respiratoryUnit[7].pulmCapysVentilated.extraSubstanceAmounts[1]:VARIABLE(start = lungs.respiratoryUnit[7].pulmCapysVentilated.tm_start * lungs.respiratoryUnit[7].pulmCapysVentilated.C_start[1] fixed = true ) \"Current amount of extra substances\" type: Real [10,3] lungs.respiratoryUnit[7].pulmCapysVentilated.extraSubstanceAmounts[2]:VARIABLE(start = lungs.respiratoryUnit[7].pulmCapysVentilated.tm_start * lungs.respiratoryUnit[7].pulmCapysVentilated.C_start[2] fixed = true ) \"Current amount of extra substances\" type: Real [10,3] lungs.respiratoryUnit[7].pulmCapysVentilated.extraSubstanceAmounts[3]:VARIABLE(start = lungs.respiratoryUnit[7].pulmCapysVentilated.tm_start * lungs.respiratoryUnit[7].pulmCapysVentilated.C_start[3] fixed = true ) \"Current amount of extra substances\" type: Real [10,3] lungs.respiratoryUnit[8].pulmCapysVentilated.extraSubstanceAmounts[1]:VARIABLE(start = lungs.respiratoryUnit[8].pulmCapysVentilated.tm_start * lungs.respiratoryUnit[8].pulmCapysVentilated.C_start[1] fixed = true ) \"Current amount of extra substances\" type: Real [10,3] lungs.respiratoryUnit[8].pulmCapysVentilated.extraSubstanceAmounts[2]:VARIABLE(start = lungs.respiratoryUnit[8].pulmCapysVentilated.tm_start * lungs.respiratoryUnit[8].pulmCapysVentilated.C_start[2] fixed = true ) \"Current amount of extra substances\" type: Real [10,3] lungs.respiratoryUnit[8].pulmCapysVentilated.extraSubstanceAmounts[3]:VARIABLE(start = lungs.respiratoryUnit[8].pulmCapysVentilated.tm_start * lungs.respiratoryUnit[8].pulmCapysVentilated.C_start[3] fixed = true ) \"Current amount of extra substances\" type: Real [10,3] lungs.respiratoryUnit[9].pulmCapysVentilated.extraSubstanceAmounts[1]:VARIABLE(start = lungs.respiratoryUnit[9].pulmCapysVentilated.tm_start * lungs.respiratoryUnit[9].pulmCapysVentilated.C_start[1] fixed = true ) \"Current amount of extra substances\" type: Real [10,3] lungs.respiratoryUnit[9].pulmCapysVentilated.extraSubstanceAmounts[2]:VARIABLE(start = lungs.respiratoryUnit[9].pulmCapysVentilated.tm_start * lungs.respiratoryUnit[9].pulmCapysVentilated.C_start[2] fixed = true ) \"Current amount of extra substances\" type: Real [10,3] lungs.respiratoryUnit[9].pulmCapysVentilated.extraSubstanceAmounts[3]:VARIABLE(start = lungs.respiratoryUnit[9].pulmCapysVentilated.tm_start * lungs.respiratoryUnit[9].pulmCapysVentilated.C_start[3] fixed = true ) \"Current amount of extra substances\" type: Real [10,3] lungs.respiratoryUnit[10].pulmCapysVentilated.extraSubstanceAmounts[1]:VARIABLE(start = lungs.respiratoryUnit[10].pulmCapysVentilated.tm_start * lungs.respiratoryUnit[10].pulmCapysVentilated.C_start[1] fixed = true ) \"Current amount of extra substances\" type: Real [10,3] lungs.respiratoryUnit[10].pulmCapysVentilated.extraSubstanceAmounts[2]:VARIABLE(start = lungs.respiratoryUnit[10].pulmCapysVentilated.tm_start * lungs.respiratoryUnit[10].pulmCapysVentilated.C_start[2] fixed = true ) \"Current amount of extra substances\" type: Real [10,3] lungs.respiratoryUnit[10].pulmCapysVentilated.extraSubstanceAmounts[3]:VARIABLE(start = lungs.respiratoryUnit[10].pulmCapysVentilated.tm_start * lungs.respiratoryUnit[10].pulmCapysVentilated.C_start[3] fixed = true ) \"Current amount of extra substances\" type: Real [10,3] Warning: The initial conditions are over specified. The following 1 initial equations are redundant, so they are removed from the initialization system: lungs.pleuralSpace.mass = lungs.pleuralSpace.tm_start. Notification: Model statistics after passing the back-end for initialization: * Number of independent subsystems: 3490 * Number of states: 0 () * Number of discrete variables: 0 () * Number of discrete states: 0 () * Number of clocked states: 0 () * Top-level inputs: 0 Notification: Strong component statistics for initialization (9867): * Single equations (assignments): 9771 * Array equations: 0 * Algorithm blocks: 0 * Record equations: 50 * When equations: 0 * If-equations: 0 * Equation systems (not torn): 0 * Torn equation systems: 46 * Mixed (continuous/discrete) equation systems: 0 Notification: Torn system details for strict tearing set: * Linear torn systems (#iteration vars, #inner vars, density): 0 systems * Non-linear torn systems (#iteration vars, #inner vars): 46 systems {(1,1), (1,1), (1,1), (1,1), (1,1), (1,1), (1,1), (1,1), (1,1), (1,1), (1,3), (1,1), (1,1), (1,1), (1,1), (1,1), (1,1), (1,1), (1,1), (1,1), (1,1), (1,1), (1,3), (10,61), (11,87), (6,9), (1,3), (6,9), (1,3), (6,9), (1,3), (6,9), (1,3), (6,9), (1,3), (5,10), (1,3), (6,9), (1,3), (5,10), (1,3), (5,10), (1,3), (6,9), (1,3), (10,24)} Notification: Performance of prepare postOptimizeDAE: time 0.5289/31.04, allocations: 38.25 MB / 7.449 GB, free: 297.1 MB / 1.092 GB Notification: Performance of postOpt lateInlineFunction (simulation): time 0.03386/31.07, allocations: 4.858 MB / 7.454 GB, free: 297.1 MB / 1.092 GB Notification: Performance of postOpt wrapFunctionCalls (simulation): time 0.7741/31.85, allocations: 314.3 MB / 7.761 GB, free: 147.4 MB / 1.092 GB Notification: Performance of postOpt inlineArrayEqn (simulation): time 1.145/32.99, allocations: 265.5 MB / 8.02 GB, free: 215 MB / 1.092 GB Notification: Performance of postOpt constantLinearSystem (simulation): time 0.0001709/32.99, allocations: 0 / 8.02 GB, free: 215 MB / 1.092 GB Notification: Performance of postOpt simplifysemiLinear (simulation): time 0.001689/32.99, allocations: 323.3 kB / 8.02 GB, free: 215 MB / 1.092 GB Notification: Performance of postOpt removeSimpleEquations (simulation): time 1.594/34.59, allocations: 0.5064 GB / 8.527 GB, free: 149.9 MB / 1.092 GB Notification: Performance of postOpt simplifyComplexFunction (simulation): time 0.000506/34.59, allocations: 0 / 8.527 GB, free: 149.9 MB / 1.092 GB Notification: Performance of postOpt solveSimpleEquations (simulation): time 0.07739/34.66, allocations: 15.75 MB / 8.542 GB, free: 137.1 MB / 1.092 GB Notification: Performance of postOpt tearingSystem (simulation): time 0.3576/35.02, allocations: 50.19 MB / 8.591 GB, free: 87.37 MB / 1.092 GB Notification: Performance of postOpt inputDerivativesUsed (simulation): time 0.0217/35.04, allocations: 2.757 MB / 8.594 GB, free: 84.61 MB / 1.092 GB Notification: Performance of postOpt calculateStrongComponentJacobians (simulation): time 0.5372/35.58, allocations: 73.5 MB / 8.665 GB, free: 274.4 MB / 1.092 GB Notification: Performance of postOpt calculateStateSetsJacobians (simulation): time 3.417e-06/35.58, allocations: 2.109 kB / 8.665 GB, free: 274.4 MB / 1.092 GB Notification: Performance of postOpt symbolicJacobian (simulation): time 1.362/36.94, allocations: 498.6 MB / 9.152 GB, free: 245.1 MB / 1.092 GB Notification: Performance of postOpt removeConstants (simulation): time 0.06791/37.01, allocations: 29.11 MB / 9.181 GB, free: 234.5 MB / 1.092 GB Notification: Performance of postOpt simplifyTimeIndepFuncCalls (simulation): time 0.02997/37.04, allocations: 1.95 MB / 9.183 GB, free: 233.3 MB / 1.092 GB Notification: Performance of postOpt simplifyAllExpressions (simulation): time 0.06377/37.1, allocations: 4.374 MB / 9.187 GB, free: 232.3 MB / 1.092 GB Notification: Performance of postOpt findZeroCrossings (simulation): time 0.05668/37.16, allocations: 25.35 MB / 9.212 GB, free: 229.2 MB / 1.092 GB Notification: Performance of postOpt collapseArrayExpressions (simulation): time 0.01939/37.18, allocations: 3.856 MB / 9.216 GB, free: 225.4 MB / 1.092 GB Notification: Performance of sorting global known variables: time 0.06024/37.24, allocations: 32.34 MB / 9.247 GB, free: 199.1 MB / 1.092 GB Notification: Performance of sort global known variables: time 2.2e-07/37.24, allocations: 0.875 kB / 9.247 GB, free: 199.1 MB / 1.092 GB Notification: Performance of remove unused functions: time 0.1175/37.36, allocations: 34.59 MB / 9.281 GB, free: 164.5 MB / 1.092 GB Notification: Model statistics after passing the back-end for simulation: * Number of independent subsystems: 1 * Number of states: 568 (lungs.pulmArty.enthalpy,lungs.pulmArty.extraSubstanceAmounts[1],lungs.pulmArty.extraSubstanceAmounts[2],lungs.pulmArty.extraSubstanceAmounts[3],lungs.pulmArty.substanceMasses[1],lungs.pulmArty.substanceMasses[2],lungs.pulmArty.substanceMasses[3],lungs.pulmArty.substanceMasses[4],lungs.pulmArty.substanceMasses[5],lungs.pulmArty.substanceMasses[6],lungs.pulmArty.substanceMasses[7],lungs.pulmArty.substanceMasses[8],lungs.pulmArty.substanceMasses[9],lungs.pulmArty.substanceMasses[10],lungs.pulmArty.substanceMasses[11],lungs.pulmArty.substanceMasses[12],lungs.pulmArty.substanceMasses[13],lungs.pulmArty.substanceMasses[14],lungs.pulmArty.substanceMasses[15],lungs.pulmArty.substanceMasses[16],lungs.pulmArty.substanceMasses[17],lungs.pulmArty.substanceMasses[18],lungs.pulmArty.substanceMasses[19],lungs.pulmArty.substanceMasses[20],lungs.pulmArty.substanceMasses[21],lungs.pulmArty.substanceMasses[22],lungs.pulmArty.substanceMasses[23],lungs.pulmArty.substanceMasses[24],lungs.pulmArty.substanceMasses[25],lungs.pulmArty.substanceMasses[26],lungs.pulmArty.substanceMasses[27],lungs.pulmArty.substanceMasses[28],lungs.pulmArty.substanceMasses[29],lungs.pulmArty.substanceMasses[30],lungs.pulmArty.substanceMasses[31],lungs.pulmArty.substanceMasses[32],lungs.pulmArty.substanceMasses[33],lungs.pulmArty.substanceMasses[34],lungs.pulmArty.substanceMasses[35],lungs.pulmArty.substanceMasses[36],lungs.pulmArty.substanceMasses[37],lungs.pulmArty.substanceMasses[38],lungs.pulmArty.substanceMasses[39],lungs.pulmVeins.enthalpy,lungs.pulmVeins.extraSubstanceAmounts[1],lungs.pulmVeins.extraSubstanceAmounts[2],lungs.pulmVeins.extraSubstanceAmounts[3],lungs.pulmVeins.substanceMasses[1],lungs.pulmVeins.substanceMasses[2],lungs.pulmVeins.substanceMasses[3],lungs.pulmVeins.substanceMasses[4],lungs.pulmVeins.substanceMasses[5],lungs.pulmVeins.substanceMasses[6],lungs.pulmVeins.substanceMasses[7],lungs.pulmVeins.substanceMasses[8],lungs.pulmVeins.substanceMasses[9],lungs.pulmVeins.substanceMasses[10],lungs.pulmVeins.substanceMasses[11],lungs.pulmVeins.substanceMasses[12],lungs.pulmVeins.substanceMasses[13],lungs.pulmVeins.substanceMasses[14],lungs.pulmVeins.substanceMasses[15],lungs.pulmVeins.substanceMasses[16],lungs.pulmVeins.substanceMasses[17],lungs.pulmVeins.substanceMasses[18],lungs.pulmVeins.substanceMasses[19],lungs.pulmVeins.substanceMasses[20],lungs.pulmVeins.substanceMasses[21],lungs.pulmVeins.substanceMasses[22],lungs.pulmVeins.substanceMasses[23],lungs.pulmVeins.substanceMasses[24],lungs.pulmVeins.substanceMasses[25],lungs.pulmVeins.substanceMasses[26],lungs.pulmVeins.substanceMasses[27],lungs.pulmVeins.substanceMasses[28],lungs.pulmVeins.substanceMasses[29],lungs.pulmVeins.substanceMasses[30],lungs.pulmVeins.substanceMasses[31],lungs.pulmVeins.substanceMasses[32],lungs.pulmVeins.substanceMasses[33],lungs.pulmVeins.substanceMasses[34],lungs.pulmVeins.substanceMasses[35],lungs.pulmVeins.substanceMasses[36],lungs.pulmVeins.substanceMasses[37],lungs.pulmVeins.substanceMasses[38],lungs.pulmVeins.substanceMasses[39],lungs.pleuralSpace.enthalpy,lungs.pleuralSpace.substanceMasses[1],lungs.respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[1],lungs.respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[2],lungs.respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[3],lungs.respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[4],lungs.respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[5],lungs.respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[6],lungs.respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[7],lungs.respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[8],lungs.respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[9],lungs.respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[10],lungs.respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[11],lungs.respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[12],lungs.respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[13],lungs.respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[14],lungs.respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[15],lungs.respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[16],lungs.respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[17],lungs.respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[18],lungs.respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[19],lungs.respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[20],lungs.respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[21],lungs.respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[22],lungs.respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[23],lungs.respira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olution.substanceMasses[36],lungs.respiratoryUnit[10].pulmCapysVentilated.chemicalSolution.substanceMasses[37],lungs.respiratoryUnit[10].pulmCapysVentilated.chemicalSolution.substanceMasses[38],lungs.respiratoryUnit[10].pulmCapysVentilated.chemicalSolution.substanceMasses[39],lungs.respiratoryUnit[10].pulmCapysVentilated.enthalpy,lungs.respiratoryUnit[10].pulmCapysVentilated.extraSubstanceAmounts[1],lungs.respiratoryUnit[10].pulmCapysVentilated.extraSubstanceAmounts[2],lungs.respiratoryUnit[10].pulmCapysVentilated.extraSubstanceAmounts[3],lungs.respiratoryUnit[10].alveoli.chemicalSolution.substanceMasses[1],lungs.respiratoryUnit[10].alveoli.chemicalSolution.substanceMasses[2],lungs.respiratoryUnit[10].alveoli.chemicalSolution.substanceMasses[3],lungs.respiratoryUnit[10].alveoli.chemicalSolution.substanceMasses[4],lungs.respiratoryUnit[10].alveoli.enthalpy) * Number of discrete variables: 0 () * Number of discrete states: 0 () * Number of clocked states: 0 () * Top-level inputs: 0 Notification: Strong component statistics for simulation (7560): * Single equations (assignments): 7464 * Array equations: 0 * Algorithm blocks: 0 * Record equations: 50 * When equations: 0 * If-equations: 0 * Equation systems (not torn): 0 * Torn equation systems: 46 * Mixed (continuous/discrete) equation systems: 0 Notification: Torn system details for strict tearing set: * Linear torn systems (#iteration vars, #inner vars, density): 0 systems * Non-linear torn systems (#iteration vars, #inner vars): 46 systems {(1,1), (1,1), (1,1), (1,1), (1,1), (1,1), (1,1), (1,1), (1,1), (1,1), (1,4), (1,1), (1,1), (1,1), (1,1), (1,1), (1,1), (1,1), (1,1), (1,1), (1,1), (1,1), (1,4), (6,10), (1,4), (5,11), (1,4), (5,11), (1,4), (6,10), (1,4), (5,11), (1,4), (5,11), (1,4), (5,11), (1,4), (5,11), (1,4), (6,10), (1,4), (5,11), (1,4), (11,99), (10,72), (11,34)} Notification: Performance of Backend phase and start with SimCode phase: time 0.02881/37.39, allocations: 7.266 MB / 9.288 GB, free: 158.7 MB / 1.092 GB Notification: Performance of simCode: created initialization part: time 0.9064/38.29, allocations: 277.5 MB / 9.559 GB, free: 233 MB / 1.092 GB Notification: Performance of simCode: created event and clocks part: time 1.086e-05/38.29, allocations: 3.562 kB / 9.559 GB, free: 233 MB / 1.092 GB Notification: Performance of simCode: created simulation system equations: time 0.2138/38.51, allocations: 131.5 MB / 9.687 GB, free: 152.7 MB / 1.092 GB Notification: Performance of simCode: created of all other equations (e.g. parameter, nominal, assert, etc): time 0.2177/38.73, allocations: 43.64 MB / 9.73 GB, free: 110.9 MB / 1.092 GB Notification: Performance of simCode: created linear, non-linear and system jacobian parts: time 1.524/40.25, allocations: 375.8 MB / 10.1 GB, free: 93.08 MB / 1.092 GB Notification: Performance of simCode: some other stuff during SimCode phase: time 0.1337/40.38, allocations: 55.39 MB / 10.15 GB, free: 49.77 MB / 1.092 GB Notification: Performance of simCode: all other stuff during SimCode phase: time 0.07018/40.45, allocations: 9.353 MB / 10.16 GB, free: 41.5 MB / 1.092 GB Notification: Performance of SimCode: time 2.014e-06/40.45, allocations: 0 / 10.16 GB, free: 41.5 MB / 1.092 GB Notification: Performance of Templates: time 45.81/86.26, allocations: 22.11 GB / 32.27 GB, free: 154.2 MB / 1.342 GB " [Timeout remaining time 574] make -j1 -f Physiolibrary_Physiolibrary.Organs.Lungs.Examples.MeanLungsTest.makefile [Timeout 660] make -j1 -f Physiolibrary_Physiolibrary.Organs.Lungs.Examples.MeanLungsTest.makefile clang++ -std=c++17 -fopenmp=libomp -Winvalid-pch -O2 -g -DNDEBUG -fPIC -std=c++11 -DBOOST_ALL_DYN_LINK -DUSE_DGESV -DUSE_LOGGER -DOMC_BUILD -DUSE_THREAD -DSUNDIALS_MAJOR_VERSION=5 -DSUNDIALS_MINOR_VERSION=4 -DPMC_USE_SUNDIALS -I"." -I"/var/lib/jenkins1/ws/OpenModelicaLibraryTestingWork_2/OpenModelica/OMCompiler/build/bin/../include/omc/cpp/" -I. "-I/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.0.0+maint.om/Resources/C-Sources" -I"." -I"." -I"/var/lib/jenkins1/ws/OpenModelicaLibraryTestingWork_2/OpenModelica/OMCompiler/build/include/omc/sundials" "-I/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.0.0+maint.om/Resources/C-Sources" -DMEASURETIME_PROFILEBLOCKS -DUSE_LOGGER -c -o OMCppPhysiolibrary_Physiolibrary.Organs.Lungs.Examples.MeanLungsTestCalcHelperMain.o OMCppPhysiolibrary_Physiolibrary.Organs.Lungs.Examples.MeanLungsTestCalcHelperMain.cpp In file included from OMCppPhysiolibrary_Physiolibrary.Organs.Lungs.Examples.MeanLungsTestCalcHelperMain.cpp:8: In file included from /var/lib/jenkins1/ws/OpenModelicaLibraryTestingWork_2/OpenModelica/OMCompiler/build/bin/../include/omc/cpp/Core/Modelica.h:206: /var/lib/jenkins1/ws/OpenModelicaLibraryTestingWork_2/OpenModelica/OMCompiler/build/bin/../include/omc/cpp/Core/Math/Array.h:883:14: error: array type 'std::basic_string[1]' is not assignable _array = otherarray._array; ~~~~~~ ^ /var/lib/jenkins1/ws/OpenModelicaLibraryTestingWork_2/OpenModelica/OMCompiler/build/bin/../include/omc/cpp/Core/Math/Array.h:1056:6: note: in instantiation of member function 'StatArray, 1, false>::StatArray' requested here :StatArray(otherarray) ^ ./OMCppPhysiolibrary_Physiolibrary.Organs.Lungs.Examples.MeanLungsTestTypes.h:9:8: note: in instantiation of member function 'StatArrayDim1, 1, false>::StatArrayDim1' requested here struct Chemical_Interfaces_IdealGas_SubstanceDataType ^ 1 error generated. make: *** [: OMCppPhysiolibrary_Physiolibrary.Organs.Lungs.Examples.MeanLungsTestCalcHelperMain.o] Error 1 [Calling os._exit(0), Time elapsed: 94.84964870102704] Failed to read output from testmodel.py, exit status != 0: 86.27436026302166 86.283002731 77.159381832 Calling exit ...