Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr Chemical_master_Chemical.Obsolete.Examples.Hemoglobin.Joels57.conf.json
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo): time 0.00158/0.00158, allocations: 115.5 kB / 17.13 MB, free: 6.004 MB / 14.72 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo): time 0.001786/0.001786, allocations: 213.8 kB / 20.1 MB, free: 3.055 MB / 14.72 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo): time 1.462/1.462, allocations: 230.6 MB / 253.5 MB, free: 15.09 MB / 206.1 MB
"
[Timeout remaining time 178]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/package.mo): time 0.1347/0.1347, allocations: 23.9 MB / 333.4 MB, free: 1.168 MB / 254.1 MB
"
[Timeout remaining time 180]
Using package Chemical with version 2.0.1 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/package.mo)
Using package Modelica with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo)
Using package Complex with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo)
Using package ModelicaServices with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo)
Running command: translateModel(Chemical.Obsolete.Examples.Hemoglobin.Joels57,tolerance=1e-05,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Chemical_master_Chemical.Obsolete.Examples.Hemoglobin.Joels57")
translateModel(Chemical.Obsolete.Examples.Hemoglobin.Joels57,tolerance=1e-05,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Chemical_master_Chemical.Obsolete.Examples.Hemoglobin.Joels57") [Timeout 660]
"Notification: Chemical requested package Modelica of version 4.0.0. Modelica 4.1.0 is used instead which states that it is fully compatible without conversion script needed.
Notification: Performance of FrontEnd - loaded program: time 0.002067/0.002067, allocations: 64.7 kB / 467.2 MB, free: 30.5 MB / 350.1 MB
Notification: Performance of FrontEnd - Absyn->SCode: time 0.09288/0.09495, allocations: 59.84 MB / 0.5147 GB, free: 12.39 MB / 382.1 MB
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Obsolete.mo:14335:7-14335:66:writable] Warning: An inner declaration for outer component system could not be found and was automatically generated.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Obsolete.mo:14335:7-14335:66:writable] Notification: The diagnostics message for the missing inner is: 
Your model is using an outer \"system\" component but
an inner \"system\" component is not defined.
For simulation drag Modelica.Fluid.System into your model
to specify system properties.
Notification: Performance of NFInst.instantiate(Chemical.Obsolete.Examples.Hemoglobin.Joels57): time 0.5133/0.6083, allocations: 83.41 MB / 0.5962 GB, free: 0.5703 MB / 446.1 MB
Notification: Performance of NFInst.instExpressions: time 0.2543/0.8625, allocations: 217.7 MB / 0.8088 GB, free: 14.55 MB / 0.6075 GB
Notification: Performance of NFInst.updateImplicitVariability: time 0.01099/0.8735, allocations: 230.1 kB / 0.809 GB, free: 14.32 MB / 0.6075 GB
Notification: Performance of NFTyping.typeComponents: time 0.01501/0.8885, allocations: 4.909 MB / 0.8138 GB, free: 9.379 MB / 0.6075 GB
Notification: Performance of NFTyping.typeBindings: time 0.3443/1.233, allocations: 17.77 MB / 0.8311 GB, free: 8.562 MB / 0.6075 GB
Notification: Performance of NFTyping.typeClassSections: time 0.07049/1.303, allocations: 32.37 MB / 0.8628 GB, free: 8.395 MB / 0.6075 GB
Notification: Performance of NFFlatten.flatten: time 0.0838/1.387, allocations: 89.21 MB / 0.9499 GB, free: 13.6 MB / 0.6544 GB
Notification: Performance of NFFlatten.resolveConnections: time 0.08368/1.471, allocations: 61.24 MB / 1.01 GB, free: 2.785 MB / 0.7013 GB
Notification: Performance of NFEvalConstants.evaluate: time 0.08973/1.56, allocations: 56.51 MB / 1.065 GB, free: 11.06 MB / 0.7638 GB
Notification: Performance of NFSimplifyModel.simplify: time 0.7319/2.292, allocations: 52.01 MB / 1.116 GB, free: 76.24 MB / 0.7795 GB
Notification: Performance of NFPackage.collectConstants: time 0.03419/2.327, allocations: 12.2 MB / 1.128 GB, free: 76.24 MB / 0.7795 GB
Notification: Performance of NFFlatten.collectFunctions: time 0.1035/2.43, allocations: 35.44 MB / 1.162 GB, free: 76.24 MB / 0.7795 GB
Notification: Performance of NFScalarize.scalarize: time 0.04053/2.471, allocations: 24.02 MB / 1.186 GB, free: 76.24 MB / 0.7795 GB
Notification: Performance of NFVerifyModel.verify: time 0.06867/2.539, allocations: 40.57 MB / 1.225 GB, free: 56.79 MB / 0.7795 GB
Notification: Performance of NFConvertDAE.convert: time 0.2171/2.756, allocations: 159.5 MB / 1.381 GB, free: 14.96 MB / 0.8733 GB
Notification: Performance of FrontEnd - DAE generated: time 5.08e-06/2.756, allocations: 0 / 1.381 GB, free: 14.96 MB / 0.8733 GB
Notification: Performance of FrontEnd: time 1.373e-06/2.756, allocations: 0 / 1.381 GB, free: 14.96 MB / 0.8733 GB
Notification: Performance of Transformations before backend: time 0.002655/2.759, allocations: 0 / 1.381 GB, free: 14.96 MB / 0.8733 GB
Notification: Model statistics after passing the front-end and creating the data structures used by the back-end:
 * Number of equations: 11424
 * Number of variables: 11424
Notification: Performance of Generate backend data structure: time 0.7565/3.515, allocations: 71.8 MB / 1.451 GB, free: 316.9 MB / 0.8735 GB
Notification: Performance of prepare preOptimizeDAE: time 3.748e-05/3.516, allocations: 11.62 kB / 1.451 GB, free: 316.9 MB / 0.8735 GB
Notification: Performance of preOpt normalInlineFunction (simulation): time 0.07874/3.594, allocations: 11.94 MB / 1.463 GB, free: 311.5 MB / 0.8735 GB
Notification: Performance of preOpt evaluateParameters (simulation): time 0.08414/3.678, allocations: 41.27 MB / 1.503 GB, free: 283.3 MB / 0.8735 GB
Notification: Performance of preOpt simplifyIfEquations (simulation): time 0.004594/3.683, allocations: 6.432 MB / 1.509 GB, free: 276.2 MB / 0.8735 GB
Notification: Performance of preOpt expandDerOperator (simulation): time 0.02779/3.711, allocations: 4.596 MB / 1.514 GB, free: 271.6 MB / 0.8735 GB
Notification: Performance of preOpt clockPartitioning (simulation): time 0.2336/3.944, allocations: 112.8 MB / 1.624 GB, free: 158.2 MB / 0.8735 GB
Notification: Performance of preOpt findStateOrder (simulation): time 0.001821/3.946, allocations: 31.69 kB / 1.624 GB, free: 158.1 MB / 0.8735 GB
Notification: Performance of preOpt replaceEdgeChange (simulation): time 0.02349/3.97, allocations: 1.758 MB / 1.626 GB, free: 156.4 MB / 0.8735 GB
Notification: Performance of preOpt inlineArrayEqn (simulation): time 0.0006042/3.97, allocations: 1.06 MB / 1.627 GB, free: 155.3 MB / 0.8735 GB
Notification: Performance of preOpt removeEqualRHS (simulation): time 0.2418/4.212, allocations: 153.7 MB / 1.777 GB, free: 1.43 MB / 0.8735 GB
Warning: The model contains alias variables with redundant start and/or conflicting nominal values. It is recommended to resolve the conflicts, because otherwise the system could be hard to solve. To print the conflicting alias sets and the chosen candidates please use -d=aliasConflicts.
Notification: Performance of preOpt removeSimpleEquations (simulation): time 1.512/5.724, allocations: 436.4 MB / 2.203 GB, free: 207.7 MB / 0.8735 GB
Notification: Performance of preOpt comSubExp (simulation): time 2.478/8.202, allocations: 0.8136 GB / 3.017 GB, free: 181.3 MB / 0.8735 GB
Notification: Performance of preOpt resolveLoops (simulation): time 0.09439/8.296, allocations: 60.08 MB / 3.075 GB, free: 137.3 MB / 0.8735 GB
Notification: Performance of preOpt evalFunc (simulation): time 0.8086/9.105, allocations: 298.5 MB / 3.367 GB, free: 193.1 MB / 0.8735 GB
Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 0.0002437/9.105, allocations: 341.9 kB / 3.367 GB, free: 192.9 MB / 0.8735 GB
Notification: Performance of preOpt simplifyInStream (simulation): time 0.09462/9.2, allocations: 29.34 MB / 3.396 GB, free: 182.9 MB / 0.8735 GB
Notification: Performance of pre-optimization done (n=2985): time 0.0001375/9.2, allocations: 0 / 3.396 GB, free: 182.9 MB / 0.8735 GB
Notification: Performance of matching and sorting (n=3387): time 2.4/11.6, allocations: 424.5 MB / 3.81 GB, free: 73.26 MB / 0.8735 GB
Notification: Performance of inlineWhenForInitialization (initialization): time 0.0001962/11.6, allocations: 453.3 kB / 3.811 GB, free: 72.78 MB / 0.8735 GB
Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.4226/12.02, allocations: 32.15 MB / 3.842 GB, free: 254.2 MB / 0.8735 GB
Notification: Performance of collectPreVariables (initialization): time 0.01156/12.03, allocations: 0.5751 MB / 3.843 GB, free: 253.7 MB / 0.8735 GB
Notification: Performance of collectInitialEqns (initialization): time 0.01586/12.05, allocations: 21.73 MB / 3.864 GB, free: 241.5 MB / 0.8735 GB
Notification: Performance of collectInitialBindings (initialization): time 0.02074/12.07, allocations: 12.41 MB / 3.876 GB, free: 231.8 MB / 0.8735 GB
Notification: Performance of simplifyInitialFunctions (initialization): time 0.04174/12.11, allocations: 9.924 MB / 3.886 GB, free: 228.1 MB / 0.8735 GB
Notification: Performance of setup shared object (initialization): time 3.662e-05/12.11, allocations: 302.7 kB / 3.886 GB, free: 227.8 MB / 0.8735 GB
Notification: Performance of preBalanceInitialSystem (initialization): time 0.06513/12.18, allocations: 39 MB / 3.924 GB, free: 212 MB / 0.8735 GB
Notification: Performance of partitionIndependentBlocks (initialization): time 0.07632/12.25, allocations: 53.19 MB / 3.976 GB, free: 178.7 MB / 0.8735 GB
Notification: Performance of analyzeInitialSystem (initialization): time 0.1411/12.4, allocations: 96.31 MB / 4.07 GB, free: 102.9 MB / 0.8735 GB
Notification: Performance of solveInitialSystemEqSystem (initialization): time 0.000566/12.4, allocations: 128 kB / 4.07 GB, free: 102.8 MB / 0.8735 GB
Notification: Performance of matching and sorting (n=5667) (initialization): time 1.713/14.11, allocations: 257.2 MB / 4.321 GB, free: 147 MB / 0.8735 GB
Notification: Performance of prepare postOptimizeDAE: time 0.0003269/14.11, allocations: 199.1 kB / 4.322 GB, free: 147 MB / 0.8735 GB
Notification: Performance of postOpt simplifyComplexFunction (initialization): time 0.0006643/14.11, allocations: 447.9 kB / 4.322 GB, free: 147 MB / 0.8735 GB
Notification: Performance of postOpt tearingSystem (initialization): time 0.1823/14.29, allocations: 73.73 MB / 4.394 GB, free: 75 MB / 0.8735 GB
Notification: Performance of postOpt solveSimpleEquations (initialization): time 0.05064/14.34, allocations: 11.18 MB / 4.405 GB, free: 64.52 MB / 0.8735 GB
Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 0.9132/15.26, allocations: 315.1 MB / 4.713 GB, free: 78.24 MB / 0.8735 GB
Notification: Performance of postOpt simplifyAllExpressions (initialization): time 0.05332/15.31, allocations: 2.47 MB / 4.715 GB, free: 75.77 MB / 0.8735 GB
Notification: Performance of postOpt collapseArrayExpressions (initialization): time 0.01416/15.32, allocations: 2.801 MB / 4.718 GB, free: 72.97 MB / 0.8735 GB
Notification: Model statistics after passing the back-end for initialization:
 * Number of independent subsystems: 2031
 * Number of states: 0 ()
 * Number of discrete variables: 0 ()
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for initialization (5523):
 * Single equations (assignments): 5514
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 0
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 9
 * Mixed (continuous/discrete) equation systems: 0
Notification: Torn system details for strict tearing set:
 * Linear torn systems (#iteration vars, #inner vars, density): 6 systems
   {(1,3,100.0%), (33,10,82.4%), (1,3,100.0%), (33,10,82.4%), (1,3,100.0%), (33,10,82.4%)}
 * Non-linear torn systems (#iteration vars, #inner vars): 3 systems
   {(1,3), (1,3), (1,3)}
Notification: Performance of prepare postOptimizeDAE: time 0.04357/15.37, allocations: 18.35 MB / 4.736 GB, free: 55.05 MB / 0.8735 GB
Notification: Performance of postOpt lateInlineFunction (simulation): time 0.01809/15.39, allocations: 3.321 MB / 4.739 GB, free: 53.57 MB / 0.8735 GB
Notification: Performance of postOpt wrapFunctionCalls (simulation): time 1.205/16.59, allocations: 152.4 MB / 4.888 GB, free: 189.8 MB / 0.8735 GB
Notification: Performance of postOpt inlineArrayEqn (simulation): time 0.0003181/16.59, allocations: 359.4 kB / 4.888 GB, free: 189.8 MB / 0.8735 GB
Notification: Performance of postOpt constantLinearSystem (simulation): time 0.0003702/16.59, allocations: 53.91 kB / 4.888 GB, free: 189.8 MB / 0.8735 GB
Notification: Performance of postOpt simplifysemiLinear (simulation): time 0.0008878/16.59, allocations: 184.5 kB / 4.888 GB, free: 189.8 MB / 0.8735 GB
Notification: Performance of postOpt removeSimpleEquations (simulation): time 1.342/17.93, allocations: 238 MB / 5.121 GB, free: 173 MB / 0.8735 GB
Notification: Performance of postOpt simplifyComplexFunction (simulation): time 0.000358/17.93, allocations: 11.38 kB / 5.121 GB, free: 173 MB / 0.8735 GB
Notification: Performance of postOpt solveSimpleEquations (simulation): time 0.04204/17.98, allocations: 7.252 MB / 5.128 GB, free: 172.7 MB / 0.8735 GB
Notification: Performance of postOpt tearingSystem (simulation): time 0.09738/18.07, allocations: 39.76 MB / 5.167 GB, free: 171.5 MB / 0.8735 GB
Notification: Performance of postOpt inputDerivativesUsed (simulation): time 0.01075/18.08, allocations: 1.447 MB / 5.168 GB, free: 171.5 MB / 0.8735 GB
Notification: Performance of postOpt calculateStrongComponentJacobians (simulation): time 0.3271/18.41, allocations: 159.6 MB / 5.324 GB, free: 113.3 MB / 0.8735 GB
Notification: Performance of postOpt calculateStateSetsJacobians (simulation): time 9.548e-06/18.41, allocations: 16.84 kB / 5.324 GB, free: 113.3 MB / 0.8735 GB
Notification: Performance of postOpt symbolicJacobian (simulation): time 1.271/19.68, allocations: 200.4 MB / 5.52 GB, free: 152.9 MB / 0.8735 GB
Notification: Performance of postOpt removeConstants (simulation): time 0.02969/19.71, allocations: 11.15 MB / 5.531 GB, free: 149 MB / 0.8735 GB
Notification: Performance of postOpt simplifyTimeIndepFuncCalls (simulation): time 0.01607/19.73, allocations: 0.9162 MB / 5.532 GB, free: 148.4 MB / 0.8735 GB
Notification: Performance of postOpt simplifyAllExpressions (simulation): time 0.0383/19.77, allocations: 1.548 MB / 5.533 GB, free: 147.9 MB / 0.8735 GB
Notification: Performance of postOpt findZeroCrossings (simulation): time 0.0222/19.79, allocations: 4.546 MB / 5.537 GB, free: 147.2 MB / 0.8735 GB
Notification: Performance of postOpt collapseArrayExpressions (simulation): time 0.00889/19.8, allocations: 1.386 MB / 5.539 GB, free: 147 MB / 0.8735 GB
Notification: Performance of sorting global known variables: time 0.03613/19.83, allocations: 22.38 MB / 5.561 GB, free: 138.8 MB / 0.8735 GB
Notification: Performance of sort global known variables: time 1.8e-07/19.83, allocations: 0 / 5.561 GB, free: 138.8 MB / 0.8735 GB
Notification: Performance of remove unused functions: time 0.08479/19.92, allocations: 20.24 MB / 5.58 GB, free: 135.4 MB / 0.8735 GB
Notification: Model statistics after passing the back-end for simulation:
 * Number of independent subsystems: 45
 * Number of states: 180 (pCO2_2000.solution.temperature,pCO2_2000.O2_free.logn,pCO2_2000.H2O.logn,pCO2_2000.relaxed.OxyHm[1].logn,pCO2_2000.relaxed.OxyHm[2].logn,pCO2_2000.relaxed.OxyHm[3].logn,pCO2_2000.relaxed.OxyHm[4].logn,pCO2_2000.relaxed.DeoxyHm[1].logn,pCO2_2000.relaxed.DeoxyHm[2].logn,pCO2_2000.relaxed.DeoxyHm[3].logn,pCO2_2000.relaxed.DeoxyHm[4].logn,pCO2_2000.relaxed.HmAH[1].logn,pCO2_2000.relaxed.HmAH[2].logn,pCO2_2000.relaxed.HmAH[3].logn,pCO2_2000.relaxed.HmAH[4].logn,pCO2_2000.relaxed.HmA[1].logn,pCO2_2000.relaxed.HmA[2].logn,pCO2_2000.relaxed.HmA[3].logn,pCO2_2000.relaxed.HmA[4].logn,pCO2_2000.relaxed.HmNH3[1].logn,pCO2_2000.relaxed.HmNH3[2].logn,pCO2_2000.relaxed.HmNH3[3].logn,pCO2_2000.relaxed.HmNH3[4].logn,pCO2_2000.relaxed.HmNH2[1].logn,pCO2_2000.relaxed.HmNH2[2].logn,pCO2_2000.relaxed.HmNH2[3].logn,pCO2_2000.relaxed.HmNH2[4].logn,pCO2_2000.relaxed.HmNHCOO[1].logn,pCO2_2000.relaxed.HmNHCOO[2].logn,pCO2_2000.relaxed.HmNHCOO[3].logn,pCO2_2000.relaxed.HmNHCOO[4].logn,pCO2_2000.tensed.OxyHm[1].logn,pCO2_2000.tensed.OxyHm[2].logn,pCO2_2000.tensed.OxyHm[3].logn,pCO2_2000.tensed.OxyHm[4].logn,pCO2_2000.tensed.DeoxyHm[1].logn,pCO2_2000.tensed.DeoxyHm[2].logn,pCO2_2000.tensed.DeoxyHm[3].logn,pCO2_2000.tensed.DeoxyHm[4].logn,pCO2_2000.tensed.HmAH[1].logn,pCO2_2000.tensed.HmAH[2].logn,pCO2_2000.tensed.HmAH[3].logn,pCO2_2000.tensed.HmAH[4].logn,pCO2_2000.tensed.HmA[1].logn,pCO2_2000.tensed.HmA[2].logn,pCO2_2000.tensed.HmA[3].logn,pCO2_2000.tensed.HmA[4].logn,pCO2_2000.tensed.HmNH3[1].logn,pCO2_2000.tensed.HmNH3[2].logn,pCO2_2000.tensed.HmNH3[3].logn,pCO2_2000.tensed.HmNH3[4].logn,pCO2_2000.tensed.HmNH2[1].logn,pCO2_2000.tensed.HmNH2[2].logn,pCO2_2000.tensed.HmNH2[3].logn,pCO2_2000.tensed.HmNH2[4].logn,pCO2_2000.tensed.HmNHCOO[1].logn,pCO2_2000.tensed.HmNHCOO[2].logn,pCO2_2000.tensed.HmNHCOO[3].logn,pCO2_2000.tensed.HmNHCOO[4].logn,pCO2_2000.CO2_free.logn,pCO2_5330.solution.temperature,pCO2_5330.O2_free.logn,pCO2_5330.H2O.logn,pCO2_5330.relaxed.OxyHm[1].logn,pCO2_5330.relaxed.OxyHm[2].logn,pCO2_5330.relaxed.OxyHm[3].logn,pCO2_5330.relaxed.OxyHm[4].logn,pCO2_5330.relaxed.DeoxyHm[1].logn,pCO2_5330.relaxed.DeoxyHm[2].logn,pCO2_5330.relaxed.DeoxyHm[3].logn,pCO2_5330.relaxed.DeoxyHm[4].logn,pCO2_5330.relaxed.HmAH[1].logn,pCO2_5330.relaxed.HmAH[2].logn,pCO2_5330.relaxed.HmAH[3].logn,pCO2_5330.relaxed.HmAH[4].logn,pCO2_5330.relaxed.HmA[1].logn,pCO2_5330.relaxed.HmA[2].logn,pCO2_5330.relaxed.HmA[3].logn,pCO2_5330.relaxed.HmA[4].logn,pCO2_5330.relaxed.HmNH3[1].logn,pCO2_5330.relaxed.HmNH3[2].logn,pCO2_5330.relaxed.HmNH3[3].logn,pCO2_5330.relaxed.HmNH3[4].logn,pCO2_5330.relaxed.HmNH2[1].logn,pCO2_5330.relaxed.HmNH2[2].logn,pCO2_5330.relaxed.HmNH2[3].logn,pCO2_5330.relaxed.HmNH2[4].logn,pCO2_5330.relaxed.HmNHCOO[1].logn,pCO2_5330.relaxed.HmNHCOO[2].logn,pCO2_5330.relaxed.HmNHCOO[3].logn,pCO2_5330.relaxed.HmNHCOO[4].logn,pCO2_5330.tensed.OxyHm[1].logn,pCO2_5330.tensed.OxyHm[2].logn,pCO2_5330.tensed.OxyHm[3].logn,pCO2_5330.tensed.OxyHm[4].logn,pCO2_5330.tensed.DeoxyHm[1].logn,pCO2_5330.tensed.DeoxyHm[2].logn,pCO2_5330.tensed.DeoxyHm[3].logn,pCO2_5330.tensed.DeoxyHm[4].logn,pCO2_5330.tensed.HmAH[1].logn,pCO2_5330.tensed.HmAH[2].logn,pCO2_5330.tensed.HmAH[3].logn,pCO2_5330.tensed.HmAH[4].logn,pCO2_5330.tensed.HmA[1].logn,pCO2_5330.tensed.HmA[2].logn,pCO2_5330.tensed.HmA[3].logn,pCO2_5330.tensed.HmA[4].logn,pCO2_5330.tensed.HmNH3[1].logn,pCO2_5330.tensed.HmNH3[2].logn,pCO2_5330.tensed.HmNH3[3].logn,pCO2_5330.tensed.HmNH3[4].logn,pCO2_5330.tensed.HmNH2[1].logn,pCO2_5330.tensed.HmNH2[2].logn,pCO2_5330.tensed.HmNH2[3].logn,pCO2_5330.tensed.HmNH2[4].logn,pCO2_5330.tensed.HmNHCOO[1].logn,pCO2_5330.tensed.HmNHCOO[2].logn,pCO2_5330.tensed.HmNHCOO[3].logn,pCO2_5330.tensed.HmNHCOO[4].logn,pCO2_5330.CO2_free.logn,pCO2_9330.solution.temperature,pCO2_9330.O2_free.logn,pCO2_9330.H2O.logn,pCO2_9330.relaxed.OxyHm[1].logn,pCO2_9330.relaxed.OxyHm[2].logn,pCO2_9330.relaxed.OxyHm[3].logn,pCO2_9330.relaxed.OxyHm[4].logn,pCO2_9330.relaxed.DeoxyHm[1].logn,pCO2_9330.relaxed.DeoxyHm[2].logn,pCO2_9330.relaxed.DeoxyHm[3].logn,pCO2_9330.relaxed.DeoxyHm[4].logn,pCO2_9330.relaxed.HmAH[1].logn,pCO2_9330.relaxed.HmAH[2].logn,pCO2_9330.relaxed.HmAH[3].logn,pCO2_9330.relaxed.HmAH[4].logn,pCO2_9330.relaxed.HmA[1].logn,pCO2_9330.relaxed.HmA[2].logn,pCO2_9330.relaxed.HmA[3].logn,pCO2_9330.relaxed.HmA[4].logn,pCO2_9330.relaxed.HmNH3[1].logn,pCO2_9330.relaxed.HmNH3[2].logn,pCO2_9330.relaxed.HmNH3[3].logn,pCO2_9330.relaxed.HmNH3[4].logn,pCO2_9330.relaxed.HmNH2[1].logn,pCO2_9330.relaxed.HmNH2[2].logn,pCO2_9330.relaxed.HmNH2[3].logn,pCO2_9330.relaxed.HmNH2[4].logn,pCO2_9330.relaxed.HmNHCOO[1].logn,pCO2_9330.relaxed.HmNHCOO[2].logn,pCO2_9330.relaxed.HmNHCOO[3].logn,pCO2_9330.relaxed.HmNHCOO[4].logn,pCO2_9330.tensed.OxyHm[1].logn,pCO2_9330.tensed.OxyHm[2].logn,pCO2_9330.tensed.OxyHm[3].logn,pCO2_9330.tensed.OxyHm[4].logn,pCO2_9330.tensed.DeoxyHm[1].logn,pCO2_9330.tensed.DeoxyHm[2].logn,pCO2_9330.tensed.DeoxyHm[3].logn,pCO2_9330.tensed.DeoxyHm[4].logn,pCO2_9330.tensed.HmAH[1].logn,pCO2_9330.tensed.HmAH[2].logn,pCO2_9330.tensed.HmAH[3].logn,pCO2_9330.tensed.HmAH[4].logn,pCO2_9330.tensed.HmA[1].logn,pCO2_9330.tensed.HmA[2].logn,pCO2_9330.tensed.HmA[3].logn,pCO2_9330.tensed.HmA[4].logn,pCO2_9330.tensed.HmNH3[1].logn,pCO2_9330.tensed.HmNH3[2].logn,pCO2_9330.tensed.HmNH3[3].logn,pCO2_9330.tensed.HmNH3[4].logn,pCO2_9330.tensed.HmNH2[1].logn,pCO2_9330.tensed.HmNH2[2].logn,pCO2_9330.tensed.HmNH2[3].logn,pCO2_9330.tensed.HmNH2[4].logn,pCO2_9330.tensed.HmNHCOO[1].logn,pCO2_9330.tensed.HmNHCOO[2].logn,pCO2_9330.tensed.HmNHCOO[3].logn,pCO2_9330.tensed.HmNHCOO[4].logn,pCO2_9330.CO2_free.logn)
 * Number of discrete variables: 0 ()
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for simulation (3702):
 * Single equations (assignments): 3693
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 0
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 9
 * Mixed (continuous/discrete) equation systems: 0
Notification: Torn system details for strict tearing set:
 * Linear torn systems (#iteration vars, #inner vars, density): 6 systems
   {(1,3,100.0%), (33,10,82.4%), (1,3,100.0%), (33,10,82.4%), (1,3,100.0%), (33,10,82.4%)}
 * Non-linear torn systems (#iteration vars, #inner vars): 3 systems
   {(1,3), (1,3), (1,3)}
Notification: Performance of Backend phase and start with SimCode phase: time 0.03126/19.95, allocations: 10.82 MB / 5.591 GB, free: 132.6 MB / 0.8735 GB
Notification: Performance of simCode: created initialization part: time 0.1979/20.15, allocations: 85.22 MB / 5.674 GB, free: 79.29 MB / 0.8735 GB
Notification: Performance of simCode: created event and clocks part: time 1.098e-05/20.15, allocations: 4 kB / 5.674 GB, free: 79.29 MB / 0.8735 GB
Notification: Performance of simCode: created simulation system equations: time 0.1309/20.28, allocations: 54.5 MB / 5.727 GB, free: 33.94 MB / 0.8735 GB
Notification: Performance of simCode: created of all other equations (e.g. parameter, nominal, assert, etc): time 0.05702/20.34, allocations: 7.826 MB / 5.735 GB, free: 26.65 MB / 0.8735 GB
Notification: Performance of simCode: created linear, non-linear and system jacobian parts: time 0.6578/20.99, allocations: 121.6 MB / 5.854 GB, free: 196.8 MB / 0.8892 GB
Notification: Performance of simCode: some other stuff during SimCode phase: time 0.05376/21.05, allocations: 29.68 MB / 5.883 GB, free: 194.7 MB / 0.8892 GB
Notification: Performance of simCode: all other stuff during SimCode phase: time 0.02907/21.08, allocations: 4.683 MB / 5.887 GB, free: 194.4 MB / 0.8892 GB
Notification: Performance of SimCode: time 1.173e-06/21.08, allocations: 0 / 5.887 GB, free: 194.4 MB / 0.8892 GB
Notification: Performance of Templates: time 6.793/27.87, allocations: 3.299 GB / 9.186 GB, free: 108.4 MB / 0.9829 GB
"
[Timeout remaining time 632]
make -j1 -f Chemical_master_Chemical.Obsolete.Examples.Hemoglobin.Joels57.makefile [Timeout 660]
(rm -f Chemical_master_Chemical.Obsolete.Examples.Hemoglobin.Joels57.pipe ; mkfifo Chemical_master_Chemical.Obsolete.Examples.Hemoglobin.Joels57.pipe ; head -c 1048576 < Chemical_master_Chemical.Obsolete.Examples.Hemoglobin.Joels57.pipe >> ../files/Chemical_master_Chemical.Obsolete.Examples.Hemoglobin.Joels57.sim & ./Chemical_master_Chemical.Obsolete.Examples.Hemoglobin.Joels57  -abortSlowSimulation -alarm=480 -lv LOG_STATS > Chemical_master_Chemical.Obsolete.Examples.Hemoglobin.Joels57.pipe 2>&1) [Timeout 480]
[Calling sys.exit(0), Time elapsed: 87.0108269409975]
Failed to read output from testmodel.py, exit status != 0:
27.87763548499788 27.886833531 25.128124482
Calling exit ...
<OMPython.OMCSessionZMQ object at 0x7fcecddaaf50>