Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr Chemical_Chemical.Obsolete.Examples.Hemoglobin.Joels57.conf.json
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo): time 0.001356/0.001356, allocations: 118.2 kB / 17.13 MB, free: 5.945 MB / 14.72 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo): time 0.001619/0.001619, allocations: 209.5 kB / 20.09 MB, free: 2.996 MB / 14.72 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo): time 1.471/1.471, allocations: 230.6 MB / 253.5 MB, free: 15.09 MB / 206.1 MB
"
[Timeout remaining time 178]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/package.mo): time 0.142/0.142, allocations: 23.86 MB / 333.4 MB, free: 1.207 MB / 254.1 MB
"
[Timeout remaining time 180]
Using package Chemical with version 2.0.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/package.mo)
Using package Modelica with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo)
Using package Complex with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo)
Using package ModelicaServices with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo)
Running command: translateModel(Chemical.Obsolete.Examples.Hemoglobin.Joels57,tolerance=1e-05,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Chemical_Chemical.Obsolete.Examples.Hemoglobin.Joels57")
translateModel(Chemical.Obsolete.Examples.Hemoglobin.Joels57,tolerance=1e-05,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Chemical_Chemical.Obsolete.Examples.Hemoglobin.Joels57") [Timeout 660]
"Notification: Chemical requested package Modelica of version 4.0.0. Modelica 4.1.0 is used instead which states that it is fully compatible without conversion script needed.
Notification: Performance of FrontEnd - loaded program: time 0.001956/0.001956, allocations: 67.5 kB / 467.2 MB, free: 30.54 MB / 350.1 MB
Notification: Performance of FrontEnd - Absyn->SCode: time 0.09803/0.09999, allocations: 59.82 MB / 0.5146 GB, free: 12.47 MB / 382.1 MB
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/Obsolete.mo:14337:7-14337:66:writable] Warning: An inner declaration for outer component system could not be found and was automatically generated.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/Obsolete.mo:14337:7-14337:66:writable] Notification: The diagnostics message for the missing inner is: 
Your model is using an outer \"system\" component but
an inner \"system\" component is not defined.
For simulation drag Modelica.Fluid.System into your model
to specify system properties.
Notification: Performance of NFInst.instantiate(Chemical.Obsolete.Examples.Hemoglobin.Joels57): time 0.5777/0.6777, allocations: 83.15 MB / 0.5958 GB, free: 0.5977 MB / 446.1 MB
Notification: Performance of NFInst.instExpressions: time 0.2659/0.9436, allocations: 217.7 MB / 0.8084 GB, free: 14.94 MB / 0.6075 GB
Notification: Performance of NFInst.updateImplicitVariability: time 0.01501/0.9586, allocations: 230.1 kB / 0.8086 GB, free: 14.71 MB / 0.6075 GB
Notification: Performance of NFTyping.typeComponents: time 0.01668/0.9753, allocations: 4.913 MB / 0.8134 GB, free: 9.766 MB / 0.6075 GB
Notification: Performance of NFTyping.typeBindings: time 0.399/1.374, allocations: 17.76 MB / 0.8308 GB, free: 8.695 MB / 0.6075 GB
Notification: Performance of NFTyping.typeClassSections: time 0.07906/1.453, allocations: 32.37 MB / 0.8624 GB, free: 8.527 MB / 0.6075 GB
Notification: Performance of NFFlatten.flatten: time 0.0854/1.539, allocations: 89.21 MB / 0.9495 GB, free: 14.04 MB / 0.6544 GB
Notification: Performance of NFFlatten.resolveConnections: time 0.09109/1.63, allocations: 61.24 MB / 1.009 GB, free: 3.234 MB / 0.7013 GB
Notification: Performance of NFEvalConstants.evaluate: time 0.09154/1.721, allocations: 56.5 MB / 1.065 GB, free: 11.52 MB / 0.7638 GB
Notification: Performance of NFSimplifyModel.simplify: time 0.9806/2.702, allocations: 52.02 MB / 1.115 GB, free: 76.25 MB / 0.7795 GB
Notification: Performance of NFPackage.collectConstants: time 0.04654/2.748, allocations: 12.21 MB / 1.127 GB, free: 76.25 MB / 0.7795 GB
Notification: Performance of NFFlatten.collectFunctions: time 0.1404/2.889, allocations: 35.44 MB / 1.162 GB, free: 76.25 MB / 0.7795 GB
Notification: Performance of NFScalarize.scalarize: time 0.0555/2.944, allocations: 24.02 MB / 1.185 GB, free: 76.25 MB / 0.7795 GB
Notification: Performance of NFVerifyModel.verify: time 0.1045/3.049, allocations: 40.57 MB / 1.225 GB, free: 56.93 MB / 0.7795 GB
Notification: Performance of NFConvertDAE.convert: time 0.2882/3.337, allocations: 159.5 MB / 1.381 GB, free: 15.34 MB / 0.8733 GB
Notification: Performance of FrontEnd - DAE generated: time 9.568e-06/3.337, allocations: 4 kB / 1.381 GB, free: 15.34 MB / 0.8733 GB
Notification: Performance of FrontEnd: time 2.154e-06/3.337, allocations: 0 / 1.381 GB, free: 15.34 MB / 0.8733 GB
Notification: Performance of Transformations before backend: time 0.003765/3.341, allocations: 0 / 1.381 GB, free: 15.34 MB / 0.8733 GB
Notification: Model statistics after passing the front-end and creating the data structures used by the back-end:
 * Number of equations: 11424
 * Number of variables: 11424
Notification: Performance of Generate backend data structure: time 0.9232/4.264, allocations: 71.8 MB / 1.451 GB, free: 317.2 MB / 0.8735 GB
Notification: Performance of prepare preOptimizeDAE: time 4.974e-05/4.264, allocations: 11.86 kB / 1.451 GB, free: 317.2 MB / 0.8735 GB
Notification: Performance of preOpt normalInlineFunction (simulation): time 0.08563/4.35, allocations: 11.94 MB / 1.462 GB, free: 311.8 MB / 0.8735 GB
Notification: Performance of preOpt evaluateParameters (simulation): time 0.1026/4.452, allocations: 41.26 MB / 1.503 GB, free: 283.6 MB / 0.8735 GB
Notification: Performance of preOpt simplifyIfEquations (simulation): time 0.00613/4.458, allocations: 6.436 MB / 1.509 GB, free: 276.5 MB / 0.8735 GB
Notification: Performance of preOpt expandDerOperator (simulation): time 0.03456/4.493, allocations: 4.6 MB / 1.514 GB, free: 271.9 MB / 0.8735 GB
Notification: Performance of preOpt clockPartitioning (simulation): time 0.2755/4.769, allocations: 112.8 MB / 1.624 GB, free: 158.4 MB / 0.8735 GB
Notification: Performance of preOpt findStateOrder (simulation): time 0.002404/4.771, allocations: 31.69 kB / 1.624 GB, free: 158.4 MB / 0.8735 GB
Notification: Performance of preOpt replaceEdgeChange (simulation): time 0.02976/4.801, allocations: 1.758 MB / 1.625 GB, free: 156.6 MB / 0.8735 GB
Notification: Performance of preOpt inlineArrayEqn (simulation): time 0.0006944/4.801, allocations: 1.06 MB / 1.626 GB, free: 155.6 MB / 0.8735 GB
Notification: Performance of preOpt removeEqualRHS (simulation): time 0.2998/5.101, allocations: 153.7 MB / 1.777 GB, free: 1.691 MB / 0.8735 GB
Warning: The model contains alias variables with redundant start and/or conflicting nominal values. It is recommended to resolve the conflicts, because otherwise the system could be hard to solve. To print the conflicting alias sets and the chosen candidates please use -d=aliasConflicts.
Notification: Performance of preOpt removeSimpleEquations (simulation): time 1.726/6.827, allocations: 436.4 MB / 2.203 GB, free: 208 MB / 0.8735 GB
Notification: Performance of preOpt comSubExp (simulation): time 2.692/9.519, allocations: 0.8136 GB / 3.016 GB, free: 181.7 MB / 0.8735 GB
Notification: Performance of preOpt resolveLoops (simulation): time 0.1213/9.641, allocations: 60.07 MB / 3.075 GB, free: 137.7 MB / 0.8735 GB
Notification: Performance of preOpt evalFunc (simulation): time 1.051/10.69, allocations: 298.5 MB / 3.366 GB, free: 193.5 MB / 0.8735 GB
Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 0.0002597/10.69, allocations: 337.9 kB / 3.367 GB, free: 193.2 MB / 0.8735 GB
Notification: Performance of preOpt simplifyInStream (simulation): time 0.1294/10.82, allocations: 29.33 MB / 3.395 GB, free: 183.6 MB / 0.8735 GB
Notification: Performance of pre-optimization done (n=2985): time 0.0002195/10.82, allocations: 1.969 kB / 3.395 GB, free: 183.6 MB / 0.8735 GB
Notification: Performance of matching and sorting (n=3387): time 2.652/13.47, allocations: 424.5 MB / 3.81 GB, free: 73.8 MB / 0.8735 GB
Notification: Performance of inlineWhenForInitialization (initialization): time 0.0003921/13.47, allocations: 457.2 kB / 3.81 GB, free: 73.32 MB / 0.8735 GB
Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.4952/13.97, allocations: 32.15 MB / 3.842 GB, free: 254.8 MB / 0.8735 GB
Notification: Performance of collectPreVariables (initialization): time 0.01262/13.98, allocations: 0.5725 MB / 3.842 GB, free: 254.3 MB / 0.8735 GB
Notification: Performance of collectInitialEqns (initialization): time 0.02045/14, allocations: 21.73 MB / 3.864 GB, free: 242.1 MB / 0.8735 GB
Notification: Performance of collectInitialBindings (initialization): time 0.02384/14.03, allocations: 12.41 MB / 3.876 GB, free: 232.4 MB / 0.8735 GB
Notification: Performance of simplifyInitialFunctions (initialization): time 0.05052/14.08, allocations: 9.929 MB / 3.885 GB, free: 228.7 MB / 0.8735 GB
Notification: Performance of setup shared object (initialization): time 5.408e-05/14.08, allocations: 301.1 kB / 3.886 GB, free: 228.4 MB / 0.8735 GB
Notification: Performance of preBalanceInitialSystem (initialization): time 0.07217/14.15, allocations: 39 MB / 3.924 GB, free: 212.6 MB / 0.8735 GB
Notification: Performance of partitionIndependentBlocks (initialization): time 0.08556/14.23, allocations: 53.19 MB / 3.976 GB, free: 179.3 MB / 0.8735 GB
Notification: Performance of analyzeInitialSystem (initialization): time 0.1622/14.4, allocations: 96.31 MB / 4.07 GB, free: 103.4 MB / 0.8735 GB
Notification: Performance of solveInitialSystemEqSystem (initialization): time 0.0006877/14.4, allocations: 132.3 kB / 4.07 GB, free: 103.3 MB / 0.8735 GB
Notification: Performance of matching and sorting (n=5667) (initialization): time 1.84/16.24, allocations: 257.2 MB / 4.321 GB, free: 148.1 MB / 0.8735 GB
Notification: Performance of prepare postOptimizeDAE: time 0.0009629/16.24, allocations: 202.3 kB / 4.321 GB, free: 148.1 MB / 0.8735 GB
Notification: Performance of postOpt simplifyComplexFunction (initialization): time 0.00124/16.24, allocations: 440.9 kB / 4.322 GB, free: 148.1 MB / 0.8735 GB
Notification: Performance of postOpt tearingSystem (initialization): time 0.1868/16.43, allocations: 73.73 MB / 4.394 GB, free: 75.59 MB / 0.8735 GB
Notification: Performance of postOpt solveSimpleEquations (initialization): time 0.0546/16.48, allocations: 11.18 MB / 4.405 GB, free: 65.11 MB / 0.8735 GB
Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 1.154/17.63, allocations: 315.1 MB / 4.712 GB, free: 78.81 MB / 0.8735 GB
Notification: Performance of postOpt simplifyAllExpressions (initialization): time 0.05833/17.69, allocations: 2.481 MB / 4.715 GB, free: 76.33 MB / 0.8735 GB
Notification: Performance of postOpt collapseArrayExpressions (initialization): time 0.0178/17.71, allocations: 2.802 MB / 4.717 GB, free: 73.53 MB / 0.8735 GB
Notification: Model statistics after passing the back-end for initialization:
 * Number of independent subsystems: 2031
 * Number of states: 0 ()
 * Number of discrete variables: 0 ()
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for initialization (5523):
 * Single equations (assignments): 5514
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 0
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 9
 * Mixed (continuous/discrete) equation systems: 0
Notification: Torn system details for strict tearing set:
 * Linear torn systems (#iteration vars, #inner vars, density): 6 systems
   {(1,3,100.0%), (33,10,82.4%), (1,3,100.0%), (33,10,82.4%), (1,3,100.0%), (33,10,82.4%)}
 * Non-linear torn systems (#iteration vars, #inner vars): 3 systems
   {(1,3), (1,3), (1,3)}
Notification: Performance of prepare postOptimizeDAE: time 0.05421/17.77, allocations: 18.34 MB / 4.735 GB, free: 55.62 MB / 0.8735 GB
Notification: Performance of postOpt lateInlineFunction (simulation): time 0.02378/17.79, allocations: 3.32 MB / 4.739 GB, free: 54.14 MB / 0.8735 GB
Notification: Performance of postOpt wrapFunctionCalls (simulation): time 1.36/19.15, allocations: 152.4 MB / 4.888 GB, free: 190.4 MB / 0.8735 GB
Notification: Performance of postOpt inlineArrayEqn (simulation): time 0.0004114/19.15, allocations: 357.5 kB / 4.888 GB, free: 190.4 MB / 0.8735 GB
Notification: Performance of postOpt constantLinearSystem (simulation): time 0.0006527/19.15, allocations: 55.12 kB / 4.888 GB, free: 190.4 MB / 0.8735 GB
Notification: Performance of postOpt simplifysemiLinear (simulation): time 0.001569/19.15, allocations: 183.1 kB / 4.888 GB, free: 190.4 MB / 0.8735 GB
Notification: Performance of postOpt removeSimpleEquations (simulation): time 1.548/20.7, allocations: 238 MB / 5.121 GB, free: 173.6 MB / 0.8735 GB
Notification: Performance of postOpt simplifyComplexFunction (simulation): time 0.0004131/20.7, allocations: 11.5 kB / 5.121 GB, free: 173.6 MB / 0.8735 GB
Notification: Performance of postOpt solveSimpleEquations (simulation): time 0.04478/20.74, allocations: 7.257 MB / 5.128 GB, free: 173.3 MB / 0.8735 GB
Notification: Performance of postOpt tearingSystem (simulation): time 0.1026/20.85, allocations: 39.75 MB / 5.166 GB, free: 172.1 MB / 0.8735 GB
Notification: Performance of postOpt inputDerivativesUsed (simulation): time 0.01244/20.86, allocations: 1.447 MB / 5.168 GB, free: 172.1 MB / 0.8735 GB
Notification: Performance of postOpt calculateStrongComponentJacobians (simulation): time 0.3752/21.23, allocations: 159.6 MB / 5.324 GB, free: 113.7 MB / 0.8735 GB
Notification: Performance of postOpt calculateStateSetsJacobians (simulation): time 1.013e-05/21.23, allocations: 15.94 kB / 5.324 GB, free: 113.6 MB / 0.8735 GB
Notification: Performance of postOpt symbolicJacobian (simulation): time 1.47/22.7, allocations: 200.4 MB / 5.519 GB, free: 153.5 MB / 0.8735 GB
Notification: Performance of postOpt removeConstants (simulation): time 0.03548/22.74, allocations: 11.15 MB / 5.53 GB, free: 149.6 MB / 0.8735 GB
Notification: Performance of postOpt simplifyTimeIndepFuncCalls (simulation): time 0.0216/22.76, allocations: 0.9133 MB / 5.531 GB, free: 149 MB / 0.8735 GB
Notification: Performance of postOpt simplifyAllExpressions (simulation): time 0.04898/22.81, allocations: 1.546 MB / 5.533 GB, free: 148.5 MB / 0.8735 GB
Notification: Performance of postOpt findZeroCrossings (simulation): time 0.02836/22.84, allocations: 4.547 MB / 5.537 GB, free: 147.8 MB / 0.8735 GB
Notification: Performance of postOpt collapseArrayExpressions (simulation): time 0.01549/22.85, allocations: 1.389 MB / 5.538 GB, free: 147.6 MB / 0.8735 GB
Notification: Performance of sorting global known variables: time 0.04991/22.9, allocations: 22.38 MB / 5.56 GB, free: 139.4 MB / 0.8735 GB
Notification: Performance of sort global known variables: time 8.42e-07/22.9, allocations: 0.9375 kB / 5.56 GB, free: 139.4 MB / 0.8735 GB
Notification: Performance of remove unused functions: time 0.1114/23.02, allocations: 20.24 MB / 5.58 GB, free: 136 MB / 0.8735 GB
Notification: Model statistics after passing the back-end for simulation:
 * Number of independent subsystems: 45
 * Number of states: 180 (pCO2_2000.solution.temperature,pCO2_2000.O2_free.logn,pCO2_2000.H2O.logn,pCO2_2000.relaxed.OxyHm[1].logn,pCO2_2000.relaxed.OxyHm[2].logn,pCO2_2000.relaxed.OxyHm[3].logn,pCO2_2000.relaxed.OxyHm[4].logn,pCO2_2000.relaxed.DeoxyHm[1].logn,pCO2_2000.relaxed.DeoxyHm[2].logn,pCO2_2000.relaxed.DeoxyHm[3].logn,pCO2_2000.relaxed.DeoxyHm[4].logn,pCO2_2000.relaxed.HmAH[1].logn,pCO2_2000.relaxed.HmAH[2].logn,pCO2_2000.relaxed.HmAH[3].logn,pCO2_2000.relaxed.HmAH[4].logn,pCO2_2000.relaxed.HmA[1].logn,pCO2_2000.relaxed.HmA[2].logn,pCO2_2000.relaxed.HmA[3].logn,pCO2_2000.relaxed.HmA[4].logn,pCO2_2000.relaxed.HmNH3[1].logn,pCO2_2000.relaxed.HmNH3[2].logn,pCO2_2000.relaxed.HmNH3[3].logn,pCO2_2000.relaxed.HmNH3[4].logn,pCO2_2000.relaxed.HmNH2[1].logn,pCO2_2000.relaxed.HmNH2[2].logn,pCO2_2000.relaxed.HmNH2[3].logn,pCO2_2000.relaxed.HmNH2[4].logn,pCO2_2000.relaxed.HmNHCOO[1].logn,pCO2_2000.relaxed.HmNHCOO[2].logn,pCO2_2000.relaxed.HmNHCOO[3].logn,pCO2_2000.relaxed.HmNHCOO[4].logn,pCO2_2000.tensed.OxyHm[1].logn,pCO2_2000.tensed.OxyHm[2].logn,pCO2_2000.tensed.OxyHm[3].logn,pCO2_2000.tensed.OxyHm[4].logn,pCO2_2000.tensed.DeoxyHm[1].logn,pCO2_2000.tensed.DeoxyHm[2].logn,pCO2_2000.tensed.DeoxyHm[3].logn,pCO2_2000.tensed.DeoxyHm[4].logn,pCO2_2000.tensed.HmAH[1].logn,pCO2_2000.tensed.HmAH[2].logn,pCO2_2000.tensed.HmAH[3].logn,pCO2_2000.tensed.HmAH[4].logn,pCO2_2000.tensed.HmA[1].logn,pCO2_2000.tensed.HmA[2].logn,pCO2_2000.tensed.HmA[3].logn,pCO2_2000.tensed.HmA[4].logn,pCO2_2000.tensed.HmNH3[1].logn,pCO2_2000.tensed.HmNH3[2].logn,pCO2_2000.tensed.HmNH3[3].logn,pCO2_2000.tensed.HmNH3[4].logn,pCO2_2000.tensed.HmNH2[1].logn,pCO2_2000.tensed.HmNH2[2].logn,pCO2_2000.tensed.HmNH2[3].logn,pCO2_2000.tensed.HmNH2[4].logn,pCO2_2000.tensed.HmNHCOO[1].logn,pCO2_2000.tensed.HmNHCOO[2].logn,pCO2_2000.tensed.HmNHCOO[3].logn,pCO2_2000.tensed.HmNHCOO[4].logn,pCO2_2000.CO2_free.logn,pCO2_5330.solution.temperature,pCO2_5330.O2_free.logn,pCO2_5330.H2O.logn,pCO2_5330.relaxed.OxyHm[1].logn,pCO2_5330.relaxed.OxyHm[2].logn,pCO2_5330.relaxed.OxyHm[3].logn,pCO2_5330.relaxed.OxyHm[4].logn,pCO2_5330.relaxed.DeoxyHm[1].logn,pCO2_5330.relaxed.DeoxyHm[2].logn,pCO2_5330.relaxed.DeoxyHm[3].logn,pCO2_5330.relaxed.DeoxyHm[4].logn,pCO2_5330.relaxed.HmAH[1].logn,pCO2_5330.relaxed.HmAH[2].logn,pCO2_5330.relaxed.HmAH[3].logn,pCO2_5330.relaxed.HmAH[4].logn,pCO2_5330.relaxed.HmA[1].logn,pCO2_5330.relaxed.HmA[2].logn,pCO2_5330.relaxed.HmA[3].logn,pCO2_5330.relaxed.HmA[4].logn,pCO2_5330.relaxed.HmNH3[1].logn,pCO2_5330.relaxed.HmNH3[2].logn,pCO2_5330.relaxed.HmNH3[3].logn,pCO2_5330.relaxed.HmNH3[4].logn,pCO2_5330.relaxed.HmNH2[1].logn,pCO2_5330.relaxed.HmNH2[2].logn,pCO2_5330.relaxed.HmNH2[3].logn,pCO2_5330.relaxed.HmNH2[4].logn,pCO2_5330.relaxed.HmNHCOO[1].logn,pCO2_5330.relaxed.HmNHCOO[2].logn,pCO2_5330.relaxed.HmNHCOO[3].logn,pCO2_5330.relaxed.HmNHCOO[4].logn,pCO2_5330.tensed.OxyHm[1].logn,pCO2_5330.tensed.OxyHm[2].logn,pCO2_5330.tensed.OxyHm[3].logn,pCO2_5330.tensed.OxyHm[4].logn,pCO2_5330.tensed.DeoxyHm[1].logn,pCO2_5330.tensed.DeoxyHm[2].logn,pCO2_5330.tensed.DeoxyHm[3].logn,pCO2_5330.tensed.DeoxyHm[4].logn,pCO2_5330.tensed.HmAH[1].logn,pCO2_5330.tensed.HmAH[2].logn,pCO2_5330.tensed.HmAH[3].logn,pCO2_5330.tensed.HmAH[4].logn,pCO2_5330.tensed.HmA[1].logn,pCO2_5330.tensed.HmA[2].logn,pCO2_5330.tensed.HmA[3].logn,pCO2_5330.tensed.HmA[4].logn,pCO2_5330.tensed.HmNH3[1].logn,pCO2_5330.tensed.HmNH3[2].logn,pCO2_5330.tensed.HmNH3[3].logn,pCO2_5330.tensed.HmNH3[4].logn,pCO2_5330.tensed.HmNH2[1].logn,pCO2_5330.tensed.HmNH2[2].logn,pCO2_5330.tensed.HmNH2[3].logn,pCO2_5330.tensed.HmNH2[4].logn,pCO2_5330.tensed.HmNHCOO[1].logn,pCO2_5330.tensed.HmNHCOO[2].logn,pCO2_5330.tensed.HmNHCOO[3].logn,pCO2_5330.tensed.HmNHCOO[4].logn,pCO2_5330.CO2_free.logn,pCO2_9330.solution.temperature,pCO2_9330.O2_free.logn,pCO2_9330.H2O.logn,pCO2_9330.relaxed.OxyHm[1].logn,pCO2_9330.relaxed.OxyHm[2].logn,pCO2_9330.relaxed.OxyHm[3].logn,pCO2_9330.relaxed.OxyHm[4].logn,pCO2_9330.relaxed.DeoxyHm[1].logn,pCO2_9330.relaxed.DeoxyHm[2].logn,pCO2_9330.relaxed.DeoxyHm[3].logn,pCO2_9330.relaxed.DeoxyHm[4].logn,pCO2_9330.relaxed.HmAH[1].logn,pCO2_9330.relaxed.HmAH[2].logn,pCO2_9330.relaxed.HmAH[3].logn,pCO2_9330.relaxed.HmAH[4].logn,pCO2_9330.relaxed.HmA[1].logn,pCO2_9330.relaxed.HmA[2].logn,pCO2_9330.relaxed.HmA[3].logn,pCO2_9330.relaxed.HmA[4].logn,pCO2_9330.relaxed.HmNH3[1].logn,pCO2_9330.relaxed.HmNH3[2].logn,pCO2_9330.relaxed.HmNH3[3].logn,pCO2_9330.relaxed.HmNH3[4].logn,pCO2_9330.relaxed.HmNH2[1].logn,pCO2_9330.relaxed.HmNH2[2].logn,pCO2_9330.relaxed.HmNH2[3].logn,pCO2_9330.relaxed.HmNH2[4].logn,pCO2_9330.relaxed.HmNHCOO[1].logn,pCO2_9330.relaxed.HmNHCOO[2].logn,pCO2_9330.relaxed.HmNHCOO[3].logn,pCO2_9330.relaxed.HmNHCOO[4].logn,pCO2_9330.tensed.OxyHm[1].logn,pCO2_9330.tensed.OxyHm[2].logn,pCO2_9330.tensed.OxyHm[3].logn,pCO2_9330.tensed.OxyHm[4].logn,pCO2_9330.tensed.DeoxyHm[1].logn,pCO2_9330.tensed.DeoxyHm[2].logn,pCO2_9330.tensed.DeoxyHm[3].logn,pCO2_9330.tensed.DeoxyHm[4].logn,pCO2_9330.tensed.HmAH[1].logn,pCO2_9330.tensed.HmAH[2].logn,pCO2_9330.tensed.HmAH[3].logn,pCO2_9330.tensed.HmAH[4].logn,pCO2_9330.tensed.HmA[1].logn,pCO2_9330.tensed.HmA[2].logn,pCO2_9330.tensed.HmA[3].logn,pCO2_9330.tensed.HmA[4].logn,pCO2_9330.tensed.HmNH3[1].logn,pCO2_9330.tensed.HmNH3[2].logn,pCO2_9330.tensed.HmNH3[3].logn,pCO2_9330.tensed.HmNH3[4].logn,pCO2_9330.tensed.HmNH2[1].logn,pCO2_9330.tensed.HmNH2[2].logn,pCO2_9330.tensed.HmNH2[3].logn,pCO2_9330.tensed.HmNH2[4].logn,pCO2_9330.tensed.HmNHCOO[1].logn,pCO2_9330.tensed.HmNHCOO[2].logn,pCO2_9330.tensed.HmNHCOO[3].logn,pCO2_9330.tensed.HmNHCOO[4].logn,pCO2_9330.CO2_free.logn)
 * Number of discrete variables: 0 ()
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for simulation (3702):
 * Single equations (assignments): 3693
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 0
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 9
 * Mixed (continuous/discrete) equation systems: 0
Notification: Torn system details for strict tearing set:
 * Linear torn systems (#iteration vars, #inner vars, density): 6 systems
   {(1,3,100.0%), (33,10,82.4%), (1,3,100.0%), (33,10,82.4%), (1,3,100.0%), (33,10,82.4%)}
 * Non-linear torn systems (#iteration vars, #inner vars): 3 systems
   {(1,3), (1,3), (1,3)}
Notification: Performance of Backend phase and start with SimCode phase: time 0.0399/23.06, allocations: 10.81 MB / 5.591 GB, free: 133.2 MB / 0.8735 GB
Notification: Performance of simCode: created initialization part: time 0.2339/23.29, allocations: 85.23 MB / 5.674 GB, free: 79.74 MB / 0.8735 GB
Notification: Performance of simCode: created event and clocks part: time 1.449e-05/23.29, allocations: 4 kB / 5.674 GB, free: 79.73 MB / 0.8735 GB
Notification: Performance of simCode: created simulation system equations: time 0.1553/23.44, allocations: 54.51 MB / 5.727 GB, free: 34.28 MB / 0.8735 GB
Notification: Performance of simCode: created of all other equations (e.g. parameter, nominal, assert, etc): time 0.08324/23.53, allocations: 7.821 MB / 5.735 GB, free: 26.98 MB / 0.8735 GB
Notification: Performance of simCode: created linear, non-linear and system jacobian parts: time 0.9131/24.44, allocations: 121.6 MB / 5.854 GB, free: 197.4 MB / 0.8892 GB
Notification: Performance of simCode: some other stuff during SimCode phase: time 0.07627/24.52, allocations: 29.68 MB / 5.883 GB, free: 195.4 MB / 0.8892 GB
Notification: Performance of simCode: all other stuff during SimCode phase: time 0.03803/24.56, allocations: 4.679 MB / 5.887 GB, free: 195.2 MB / 0.8892 GB
Notification: Performance of SimCode: time 1.503e-06/24.56, allocations: 0 / 5.887 GB, free: 195.2 MB / 0.8892 GB
Notification: Performance of Templates: time 8.753/33.31, allocations: 3.299 GB / 9.186 GB, free: 108.1 MB / 0.9829 GB
"
[Timeout remaining time 627]
make -j1 -f Chemical_Chemical.Obsolete.Examples.Hemoglobin.Joels57.makefile [Timeout 660]
(rm -f Chemical_Chemical.Obsolete.Examples.Hemoglobin.Joels57.pipe ; mkfifo Chemical_Chemical.Obsolete.Examples.Hemoglobin.Joels57.pipe ; head -c 1048576 < Chemical_Chemical.Obsolete.Examples.Hemoglobin.Joels57.pipe >> ../files/Chemical_Chemical.Obsolete.Examples.Hemoglobin.Joels57.sim & ./Chemical_Chemical.Obsolete.Examples.Hemoglobin.Joels57  -abortSlowSimulation -alarm=480 -lv LOG_STATS > Chemical_Chemical.Obsolete.Examples.Hemoglobin.Joels57.pipe 2>&1) [Timeout 480]
[Calling sys.exit(0), Time elapsed: 120.46174058000906]
Failed to read output from testmodel.py, exit status != 0:
33.31867135001812 33.327006307 29.987365146
Calling exit ...
<OMPython.OMCSessionZMQ object at 0x7f1dfa093340>