Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr Chemical_Chemical.Examples.Hemoglobin.Joels57.conf.json
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.0.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.0.0+maint.om/package.mo): time 0.001555/0.001555, allocations: 117.1 kB / 17.13 MB, free: 5.941 MB / 14.72 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.0.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.0.0+maint.om/package.mo): time 0.001575/0.001575, allocations: 194.2 kB / 20.08 MB, free: 3.012 MB / 14.72 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.0.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.0.0+maint.om/package.mo): time 1.384/1.384, allocations: 225.6 MB / 248.5 MB, free: 3.621 MB / 190.1 MB
"
[Timeout remaining time 178]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.1-master/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.1-master/package.mo): time 0.09249/0.09249, allocations: 15.54 MB / 318.9 MB, free: 13.69 MB / 254.1 MB
"
[Timeout remaining time 180]
Using package Chemical with version 1.4.1 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.1-master/package.mo)
Using package Modelica with version 4.0.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.0.0+maint.om/package.mo)
Using package Complex with version 4.0.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.0.0+maint.om/package.mo)
Using package ModelicaServices with version 4.0.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.0.0+maint.om/package.mo)
Running command: translateModel(Chemical.Examples.Hemoglobin.Joels57,tolerance=1e-05,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Chemical_Chemical.Examples.Hemoglobin.Joels57")
translateModel(Chemical.Examples.Hemoglobin.Joels57,tolerance=1e-05,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Chemical_Chemical.Examples.Hemoglobin.Joels57") [Timeout 660]
"Notification: Performance of FrontEnd - loaded program: time 0.001897/0.001897, allocations: 70.19 kB / 446.1 MB, free: 47.68 MB / 366.1 MB
Notification: Performance of FrontEnd - Absyn->SCode: time 0.09159/0.09348, allocations: 56.56 MB / 0.4909 GB, free: 20.64 MB / 366.1 MB
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.1-master/package.mo:4740:7-4740:66:writable] Warning: An inner declaration for outer component system could not be found and was automatically generated.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.1-master/package.mo:4740:7-4740:66:writable] Notification: The diagnostics message for the missing inner is: 
Your model is using an outer \"system\" component but
an inner \"system\" component is not defined.
For simulation drag Modelica.Fluid.System into your model
to specify system properties.
Notification: Performance of NFInst.instantiate(Chemical.Examples.Hemoglobin.Joels57): time 0.08853/0.182, allocations: 83.12 MB / 0.572 GB, free: 4.305 MB / 430.1 MB
Notification: Performance of NFInst.instExpressions: time 0.4769/0.659, allocations: 217.4 MB / 0.7843 GB, free: 2.555 MB / 0.545 GB
Notification: Performance of NFInst.updateImplicitVariability: time 0.01264/0.6716, allocations: 175.1 kB / 0.7845 GB, free: 2.383 MB / 0.545 GB
Notification: Performance of NFTyping.typeComponents: time 0.01622/0.6878, allocations: 4.912 MB / 0.7893 GB, free: 13.43 MB / 0.5606 GB
Notification: Performance of NFTyping.typeBindings: time 0.05944/0.7473, allocations: 17.76 MB / 0.8067 GB, free: 11.55 MB / 0.5762 GB
Notification: Performance of NFTyping.typeClassSections: time 0.4272/1.174, allocations: 32.34 MB / 0.8382 GB, free: 12.31 MB / 0.5919 GB
Notification: Performance of NFFlatten.flatten: time 0.07432/1.249, allocations: 89.27 MB / 0.9254 GB, free: 14.23 MB / 0.6075 GB
Notification: Performance of NFFlatten.resolveConnections: time 0.09153/1.34, allocations: 61.25 MB / 0.9852 GB, free: 9.574 MB / 0.6544 GB
Notification: Performance of NFEvalConstants.evaluate: time 0.09422/1.435, allocations: 55.88 MB / 1.04 GB, free: 2.75 MB / 0.7012 GB
Notification: Performance of NFSimplifyModel.simplify: time 0.1075/1.542, allocations: 52.02 MB / 1.091 GB, free: 396 kB / 0.7481 GB
Notification: Performance of NFPackage.collectConstants: time 0.714/2.256, allocations: 12.2 MB / 1.103 GB, free: 80.23 MB / 0.7482 GB
Notification: Performance of NFFlatten.collectFunctions: time 0.1127/2.369, allocations: 35.44 MB / 1.137 GB, free: 80.23 MB / 0.7482 GB
Notification: Performance of NFScalarize.scalarize: time 0.03621/2.405, allocations: 24.02 MB / 1.161 GB, free: 80.23 MB / 0.7482 GB
Notification: Performance of NFVerifyModel.verify: time 0.07239/2.477, allocations: 40.57 MB / 1.2 GB, free: 76.29 MB / 0.7482 GB
Notification: Performance of NFConvertDAE.convert: time 0.2125/2.69, allocations: 149.7 MB / 1.346 GB, free: 10.27 MB / 0.795 GB
Notification: Performance of FrontEnd - DAE generated: time 6.292e-06/2.69, allocations: 2.625 kB / 1.346 GB, free: 10.27 MB / 0.795 GB
Notification: Performance of FrontEnd: time 1.573e-06/2.69, allocations: 3.281 kB / 1.346 GB, free: 10.27 MB / 0.795 GB
Notification: Performance of Transformations before backend: time 0.003002/2.693, allocations: 0 / 1.346 GB, free: 10.27 MB / 0.795 GB
Notification: Model statistics after passing the front-end and creating the data structures used by the back-end:
 * Number of equations: 11424
 * Number of variables: 11424
Notification: Performance of Generate backend data structure: time 0.802/3.495, allocations: 71.78 MB / 1.417 GB, free: 274 MB / 0.8108 GB
Notification: Performance of prepare preOptimizeDAE: time 4.448e-05/3.495, allocations: 7.875 kB / 1.417 GB, free: 274 MB / 0.8108 GB
Notification: Performance of preOpt normalInlineFunction (simulation): time 0.08024/3.575, allocations: 11.94 MB / 1.428 GB, free: 270.3 MB / 0.8108 GB
Notification: Performance of preOpt evaluateParameters (simulation): time 0.09962/3.675, allocations: 41.02 MB / 1.468 GB, free: 247.5 MB / 0.8108 GB
Notification: Performance of preOpt simplifyIfEquations (simulation): time 0.006027/3.681, allocations: 6.436 MB / 1.475 GB, free: 240.4 MB / 0.8108 GB
Notification: Performance of preOpt expandDerOperator (simulation): time 0.03439/3.715, allocations: 4.596 MB / 1.479 GB, free: 235.8 MB / 0.8108 GB
Notification: Performance of preOpt clockPartitioning (simulation): time 0.259/3.974, allocations: 112.8 MB / 1.589 GB, free: 122.3 MB / 0.8108 GB
Notification: Performance of preOpt findStateOrder (simulation): time 0.002151/3.976, allocations: 33.84 kB / 1.589 GB, free: 122.3 MB / 0.8108 GB
Notification: Performance of preOpt replaceEdgeChange (simulation): time 0.02838/4.005, allocations: 1.758 MB / 1.591 GB, free: 120.5 MB / 0.8108 GB
Notification: Performance of preOpt inlineArrayEqn (simulation): time 0.0007637/4.005, allocations: 1.059 MB / 1.592 GB, free: 119.5 MB / 0.8108 GB
Notification: Performance of preOpt removeEqualRHS (simulation): time 0.8774/4.883, allocations: 153.7 MB / 1.742 GB, free: 238.6 MB / 0.811 GB
Warning: The model contains alias variables with redundant start and/or conflicting nominal values. It is recommended to resolve the conflicts, because otherwise the system could be hard to solve. To print the conflicting alias sets and the chosen candidates please use -d=aliasConflicts.
Notification: Performance of preOpt removeSimpleEquations (simulation): time 1.184/6.067, allocations: 435.9 MB / 2.168 GB, free: 155.6 MB / 0.811 GB
Notification: Performance of preOpt comSubExp (simulation): time 2.452/8.518, allocations: 0.8136 GB / 2.981 GB, free: 26.54 MB / 0.811 GB
Notification: Performance of preOpt resolveLoops (simulation): time 0.5347/9.053, allocations: 60.08 MB / 3.04 GB, free: 241.5 MB / 0.811 GB
Notification: Performance of preOpt evalFunc (simulation): time 0.8954/9.949, allocations: 298.3 MB / 3.331 GB, free: 214.6 MB / 0.811 GB
Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 0.0002445/9.949, allocations: 336.7 kB / 3.332 GB, free: 214.5 MB / 0.811 GB
Notification: Performance of preOpt simplifyInStream (simulation): time 0.09569/10.04, allocations: 29.33 MB / 3.36 GB, free: 214.5 MB / 0.811 GB
Notification: Performance of pre-optimization done (n=2985): time 0.0002304/10.04, allocations: 3.594 kB / 3.36 GB, free: 214.5 MB / 0.811 GB
Notification: Performance of matching and sorting (n=3387): time 2.315/12.36, allocations: 424.5 MB / 3.775 GB, free: 134.2 MB / 0.811 GB
Notification: Performance of inlineWhenForInitialization (initialization): time 0.0002141/12.36, allocations: 461.3 kB / 3.775 GB, free: 133.7 MB / 0.811 GB
Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.06101/12.42, allocations: 32.15 MB / 3.807 GB, free: 102.4 MB / 0.811 GB
Notification: Performance of collectPreVariables (initialization): time 0.0133/12.43, allocations: 0.5681 MB / 3.807 GB, free: 101.8 MB / 0.811 GB
Notification: Performance of collectInitialEqns (initialization): time 0.01798/12.45, allocations: 21.74 MB / 3.828 GB, free: 85.8 MB / 0.811 GB
Notification: Performance of collectInitialBindings (initialization): time 0.02401/12.48, allocations: 12.41 MB / 3.841 GB, free: 74.86 MB / 0.811 GB
Notification: Performance of simplifyInitialFunctions (initialization): time 0.05315/12.53, allocations: 9.934 MB / 3.85 GB, free: 64.9 MB / 0.811 GB
Notification: Performance of setup shared object (initialization): time 5.5e-05/12.53, allocations: 305.1 kB / 3.851 GB, free: 64.6 MB / 0.811 GB
Notification: Performance of preBalanceInitialSystem (initialization): time 0.4527/12.98, allocations: 38.99 MB / 3.889 GB, free: 208.3 MB / 0.811 GB
Notification: Performance of partitionIndependentBlocks (initialization): time 0.08031/13.06, allocations: 53.19 MB / 3.941 GB, free: 179.1 MB / 0.811 GB
Notification: Performance of analyzeInitialSystem (initialization): time 0.1492/13.21, allocations: 96.31 MB / 4.035 GB, free: 124.8 MB / 0.811 GB
Notification: Performance of solveInitialSystemEqSystem (initialization): time 0.0006295/13.21, allocations: 127.1 kB / 4.035 GB, free: 124.8 MB / 0.811 GB
Notification: Performance of matching and sorting (n=5667) (initialization): time 1.698/14.91, allocations: 257.2 MB / 4.286 GB, free: 151.1 MB / 0.811 GB
Notification: Performance of prepare postOptimizeDAE: time 0.0002867/14.91, allocations: 202.9 kB / 4.286 GB, free: 151.1 MB / 0.811 GB
Notification: Performance of postOpt simplifyComplexFunction (initialization): time 0.0006689/14.91, allocations: 443.6 kB / 4.287 GB, free: 151.1 MB / 0.811 GB
Notification: Performance of postOpt tearingSystem (initialization): time 0.1761/15.09, allocations: 73.73 MB / 4.359 GB, free: 111.2 MB / 0.811 GB
Notification: Performance of postOpt solveSimpleEquations (initialization): time 0.04917/15.14, allocations: 11.18 MB / 4.369 GB, free: 100.7 MB / 0.811 GB
Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 1.008/16.14, allocations: 315.1 MB / 4.677 GB, free: 108.4 MB / 0.8267 GB
Notification: Performance of postOpt simplifyAllExpressions (initialization): time 0.05665/16.2, allocations: 2.477 MB / 4.68 GB, free: 107.2 MB / 0.8267 GB
Notification: Performance of postOpt collapseArrayExpressions (initialization): time 0.0171/16.22, allocations: 2.795 MB / 4.682 GB, free: 106.2 MB / 0.8267 GB
Notification: Model statistics after passing the back-end for initialization:
 * Number of independent subsystems: 2031
 * Number of states: 0 ()
 * Number of discrete variables: 0 ()
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for initialization (5523):
 * Single equations (assignments): 5514
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 0
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 9
 * Mixed (continuous/discrete) equation systems: 0
Notification: Torn system details for strict tearing set:
 * Linear torn systems (#iteration vars, #inner vars, density): 6 systems
   {(1,3,100.0%), (33,10,82.4%), (1,3,100.0%), (33,10,82.4%), (1,3,100.0%), (33,10,82.4%)}
 * Non-linear torn systems (#iteration vars, #inner vars): 3 systems
   {(1,3), (1,3), (1,3)}
Notification: Performance of prepare postOptimizeDAE: time 0.05514/16.27, allocations: 18.34 MB / 4.7 GB, free: 90.75 MB / 0.8267 GB
Notification: Performance of postOpt lateInlineFunction (simulation): time 0.02056/16.29, allocations: 3.319 MB / 4.703 GB, free: 89.28 MB / 0.8267 GB
Notification: Performance of postOpt wrapFunctionCalls (simulation): time 1.207/17.5, allocations: 152.4 MB / 4.852 GB, free: 173.4 MB / 0.8267 GB
Notification: Performance of postOpt inlineArrayEqn (simulation): time 0.0003643/17.5, allocations: 357.9 kB / 4.853 GB, free: 173.4 MB / 0.8267 GB
Notification: Performance of postOpt constantLinearSystem (simulation): time 0.0004158/17.5, allocations: 56.5 kB / 4.853 GB, free: 173.4 MB / 0.8267 GB
Notification: Performance of postOpt simplifysemiLinear (simulation): time 0.0009596/17.5, allocations: 180.5 kB / 4.853 GB, free: 173.4 MB / 0.8267 GB
Notification: Performance of postOpt removeSimpleEquations (simulation): time 0.9917/18.49, allocations: 238 MB / 5.085 GB, free: 13.96 MB / 0.8267 GB
Notification: Performance of postOpt simplifyComplexFunction (simulation): time 0.0003655/18.49, allocations: 12 kB / 5.085 GB, free: 13.95 MB / 0.8267 GB
Notification: Performance of postOpt solveSimpleEquations (simulation): time 0.04153/18.54, allocations: 7.25 MB / 5.092 GB, free: 6.695 MB / 0.8267 GB
Notification: Performance of postOpt tearingSystem (simulation): time 0.5217/19.06, allocations: 39.76 MB / 5.131 GB, free: 165.9 MB / 0.8267 GB
Notification: Performance of postOpt inputDerivativesUsed (simulation): time 0.01301/19.07, allocations: 1.444 MB / 5.133 GB, free: 165.9 MB / 0.8267 GB
Notification: Performance of postOpt calculateStrongComponentJacobians (simulation): time 0.3312/19.4, allocations: 159.6 MB / 5.288 GB, free: 104.6 MB / 0.8267 GB
Notification: Performance of postOpt calculateStateSetsJacobians (simulation): time 1.198e-05/19.4, allocations: 18.5 kB / 5.289 GB, free: 104.6 MB / 0.8267 GB
Notification: Performance of postOpt symbolicJacobian (simulation): time 1.304/20.71, allocations: 200.4 MB / 5.484 GB, free: 137.7 MB / 0.8267 GB
Notification: Performance of postOpt removeConstants (simulation): time 0.03886/20.74, allocations: 11.12 MB / 5.495 GB, free: 133.8 MB / 0.8267 GB
Notification: Performance of postOpt simplifyTimeIndepFuncCalls (simulation): time 0.01832/20.76, allocations: 0.9197 MB / 5.496 GB, free: 133.2 MB / 0.8267 GB
Notification: Performance of postOpt simplifyAllExpressions (simulation): time 0.03894/20.8, allocations: 1.553 MB / 5.497 GB, free: 132.8 MB / 0.8267 GB
Notification: Performance of postOpt findZeroCrossings (simulation): time 0.02305/20.82, allocations: 4.559 MB / 5.502 GB, free: 132.1 MB / 0.8267 GB
Notification: Performance of postOpt collapseArrayExpressions (simulation): time 0.009586/20.83, allocations: 1.385 MB / 5.503 GB, free: 131.8 MB / 0.8267 GB
Notification: Performance of sorting global known variables: time 0.03787/20.87, allocations: 22.38 MB / 5.525 GB, free: 123.6 MB / 0.8267 GB
Notification: Performance of sort global known variables: time 4e-07/20.87, allocations: 3.094 kB / 5.525 GB, free: 123.6 MB / 0.8267 GB
Notification: Performance of remove unused functions: time 0.08628/20.96, allocations: 20.24 MB / 5.545 GB, free: 121.9 MB / 0.8267 GB
Notification: Model statistics after passing the back-end for simulation:
 * Number of independent subsystems: 45
 * Number of states: 180 (pCO2_2000.solution.temperature,pCO2_2000.O2_free.logn,pCO2_2000.H2O.logn,pCO2_2000.relaxed.OxyHm[1].logn,pCO2_2000.relaxed.OxyHm[2].logn,pCO2_2000.relaxed.OxyHm[3].logn,pCO2_2000.relaxed.OxyHm[4].logn,pCO2_2000.relaxed.DeoxyHm[1].logn,pCO2_2000.relaxed.DeoxyHm[2].logn,pCO2_2000.relaxed.DeoxyHm[3].logn,pCO2_2000.relaxed.DeoxyHm[4].logn,pCO2_2000.relaxed.HmAH[1].logn,pCO2_2000.relaxed.HmAH[2].logn,pCO2_2000.relaxed.HmAH[3].logn,pCO2_2000.relaxed.HmAH[4].logn,pCO2_2000.relaxed.HmA[1].logn,pCO2_2000.relaxed.HmA[2].logn,pCO2_2000.relaxed.HmA[3].logn,pCO2_2000.relaxed.HmA[4].logn,pCO2_2000.relaxed.HmNH3[1].logn,pCO2_2000.relaxed.HmNH3[2].logn,pCO2_2000.relaxed.HmNH3[3].logn,pCO2_2000.relaxed.HmNH3[4].logn,pCO2_2000.relaxed.HmNH2[1].logn,pCO2_2000.relaxed.HmNH2[2].logn,pCO2_2000.relaxed.HmNH2[3].logn,pCO2_2000.relaxed.HmNH2[4].logn,pCO2_2000.relaxed.HmNHCOO[1].logn,pCO2_2000.relaxed.HmNHCOO[2].logn,pCO2_2000.relaxed.HmNHCOO[3].logn,pCO2_2000.relaxed.HmNHCOO[4].logn,pCO2_2000.tensed.OxyHm[1].logn,pCO2_2000.tensed.OxyHm[2].logn,pCO2_2000.tensed.OxyHm[3].logn,pCO2_2000.tensed.OxyHm[4].logn,pCO2_2000.tensed.DeoxyHm[1].logn,pCO2_2000.tensed.DeoxyHm[2].logn,pCO2_2000.tensed.DeoxyHm[3].logn,pCO2_2000.tensed.DeoxyHm[4].logn,pCO2_2000.tensed.HmAH[1].logn,pCO2_2000.tensed.HmAH[2].logn,pCO2_2000.tensed.HmAH[3].logn,pCO2_2000.tensed.HmAH[4].logn,pCO2_2000.tensed.HmA[1].logn,pCO2_2000.tensed.HmA[2].logn,pCO2_2000.tensed.HmA[3].logn,pCO2_2000.tensed.HmA[4].logn,pCO2_2000.tensed.HmNH3[1].logn,pCO2_2000.tensed.HmNH3[2].logn,pCO2_2000.tensed.HmNH3[3].logn,pCO2_2000.tensed.HmNH3[4].logn,pCO2_2000.tensed.HmNH2[1].logn,pCO2_2000.tensed.HmNH2[2].logn,pCO2_2000.tensed.HmNH2[3].logn,pCO2_2000.tensed.HmNH2[4].logn,pCO2_2000.tensed.HmNHCOO[1].logn,pCO2_2000.tensed.HmNHCOO[2].logn,pCO2_2000.tensed.HmNHCOO[3].logn,pCO2_2000.tensed.HmNHCOO[4].logn,pCO2_2000.CO2_free.logn,pCO2_5330.solution.temperature,pCO2_5330.O2_free.logn,pCO2_5330.H2O.logn,pCO2_5330.relaxed.OxyHm[1].logn,pCO2_5330.relaxed.OxyHm[2].logn,pCO2_5330.relaxed.OxyHm[3].logn,pCO2_5330.relaxed.OxyHm[4].logn,pCO2_5330.relaxed.DeoxyHm[1].logn,pCO2_5330.relaxed.DeoxyHm[2].logn,pCO2_5330.relaxed.DeoxyHm[3].logn,pCO2_5330.relaxed.DeoxyHm[4].logn,pCO2_5330.relaxed.HmAH[1].logn,pCO2_5330.relaxed.HmAH[2].logn,pCO2_5330.relaxed.HmAH[3].logn,pCO2_5330.relaxed.HmAH[4].logn,pCO2_5330.relaxed.HmA[1].logn,pCO2_5330.relaxed.HmA[2].logn,pCO2_5330.relaxed.HmA[3].logn,pCO2_5330.relaxed.HmA[4].logn,pCO2_5330.relaxed.HmNH3[1].logn,pCO2_5330.relaxed.HmNH3[2].logn,pCO2_5330.relaxed.HmNH3[3].logn,pCO2_5330.relaxed.HmNH3[4].logn,pCO2_5330.relaxed.HmNH2[1].logn,pCO2_5330.relaxed.HmNH2[2].logn,pCO2_5330.relaxed.HmNH2[3].logn,pCO2_5330.relaxed.HmNH2[4].logn,pCO2_5330.relaxed.HmNHCOO[1].logn,pCO2_5330.relaxed.HmNHCOO[2].logn,pCO2_5330.relaxed.HmNHCOO[3].logn,pCO2_5330.relaxed.HmNHCOO[4].logn,pCO2_5330.tensed.OxyHm[1].logn,pCO2_5330.tensed.OxyHm[2].logn,pCO2_5330.tensed.OxyHm[3].logn,pCO2_5330.tensed.OxyHm[4].logn,pCO2_5330.tensed.DeoxyHm[1].logn,pCO2_5330.tensed.DeoxyHm[2].logn,pCO2_5330.tensed.DeoxyHm[3].logn,pCO2_5330.tensed.DeoxyHm[4].logn,pCO2_5330.tensed.HmAH[1].logn,pCO2_5330.tensed.HmAH[2].logn,pCO2_5330.tensed.HmAH[3].logn,pCO2_5330.tensed.HmAH[4].logn,pCO2_5330.tensed.HmA[1].logn,pCO2_5330.tensed.HmA[2].logn,pCO2_5330.tensed.HmA[3].logn,pCO2_5330.tensed.HmA[4].logn,pCO2_5330.tensed.HmNH3[1].logn,pCO2_5330.tensed.HmNH3[2].logn,pCO2_5330.tensed.HmNH3[3].logn,pCO2_5330.tensed.HmNH3[4].logn,pCO2_5330.tensed.HmNH2[1].logn,pCO2_5330.tensed.HmNH2[2].logn,pCO2_5330.tensed.HmNH2[3].logn,pCO2_5330.tensed.HmNH2[4].logn,pCO2_5330.tensed.HmNHCOO[1].logn,pCO2_5330.tensed.HmNHCOO[2].logn,pCO2_5330.tensed.HmNHCOO[3].logn,pCO2_5330.tensed.HmNHCOO[4].logn,pCO2_5330.CO2_free.logn,pCO2_9330.solution.temperature,pCO2_9330.O2_free.logn,pCO2_9330.H2O.logn,pCO2_9330.relaxed.OxyHm[1].logn,pCO2_9330.relaxed.OxyHm[2].logn,pCO2_9330.relaxed.OxyHm[3].logn,pCO2_9330.relaxed.OxyHm[4].logn,pCO2_9330.relaxed.DeoxyHm[1].logn,pCO2_9330.relaxed.DeoxyHm[2].logn,pCO2_9330.relaxed.DeoxyHm[3].logn,pCO2_9330.relaxed.DeoxyHm[4].logn,pCO2_9330.relaxed.HmAH[1].logn,pCO2_9330.relaxed.HmAH[2].logn,pCO2_9330.relaxed.HmAH[3].logn,pCO2_9330.relaxed.HmAH[4].logn,pCO2_9330.relaxed.HmA[1].logn,pCO2_9330.relaxed.HmA[2].logn,pCO2_9330.relaxed.HmA[3].logn,pCO2_9330.relaxed.HmA[4].logn,pCO2_9330.relaxed.HmNH3[1].logn,pCO2_9330.relaxed.HmNH3[2].logn,pCO2_9330.relaxed.HmNH3[3].logn,pCO2_9330.relaxed.HmNH3[4].logn,pCO2_9330.relaxed.HmNH2[1].logn,pCO2_9330.relaxed.HmNH2[2].logn,pCO2_9330.relaxed.HmNH2[3].logn,pCO2_9330.relaxed.HmNH2[4].logn,pCO2_9330.relaxed.HmNHCOO[1].logn,pCO2_9330.relaxed.HmNHCOO[2].logn,pCO2_9330.relaxed.HmNHCOO[3].logn,pCO2_9330.relaxed.HmNHCOO[4].logn,pCO2_9330.tensed.OxyHm[1].logn,pCO2_9330.tensed.OxyHm[2].logn,pCO2_9330.tensed.OxyHm[3].logn,pCO2_9330.tensed.OxyHm[4].logn,pCO2_9330.tensed.DeoxyHm[1].logn,pCO2_9330.tensed.DeoxyHm[2].logn,pCO2_9330.tensed.DeoxyHm[3].logn,pCO2_9330.tensed.DeoxyHm[4].logn,pCO2_9330.tensed.HmAH[1].logn,pCO2_9330.tensed.HmAH[2].logn,pCO2_9330.tensed.HmAH[3].logn,pCO2_9330.tensed.HmAH[4].logn,pCO2_9330.tensed.HmA[1].logn,pCO2_9330.tensed.HmA[2].logn,pCO2_9330.tensed.HmA[3].logn,pCO2_9330.tensed.HmA[4].logn,pCO2_9330.tensed.HmNH3[1].logn,pCO2_9330.tensed.HmNH3[2].logn,pCO2_9330.tensed.HmNH3[3].logn,pCO2_9330.tensed.HmNH3[4].logn,pCO2_9330.tensed.HmNH2[1].logn,pCO2_9330.tensed.HmNH2[2].logn,pCO2_9330.tensed.HmNH2[3].logn,pCO2_9330.tensed.HmNH2[4].logn,pCO2_9330.tensed.HmNHCOO[1].logn,pCO2_9330.tensed.HmNHCOO[2].logn,pCO2_9330.tensed.HmNHCOO[3].logn,pCO2_9330.tensed.HmNHCOO[4].logn,pCO2_9330.CO2_free.logn)
 * Number of discrete variables: 0 ()
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for simulation (3702):
 * Single equations (assignments): 3693
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 0
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 9
 * Mixed (continuous/discrete) equation systems: 0
Notification: Torn system details for strict tearing set:
 * Linear torn systems (#iteration vars, #inner vars, density): 6 systems
   {(1,3,100.0%), (33,10,82.4%), (1,3,100.0%), (33,10,82.4%), (1,3,100.0%), (33,10,82.4%)}
 * Non-linear torn systems (#iteration vars, #inner vars): 3 systems
   {(1,3), (1,3), (1,3)}
Notification: Performance of Backend phase and start with SimCode phase: time 0.02887/20.99, allocations: 10.67 MB / 5.555 GB, free: 120.6 MB / 0.8267 GB
Notification: Performance of simCode: created initialization part: time 0.1914/21.18, allocations: 85.22 MB / 5.639 GB, free: 64.54 MB / 0.8267 GB
Notification: Performance of simCode: created event and clocks part: time 1.219e-05/21.18, allocations: 4 kB / 5.639 GB, free: 64.53 MB / 0.8267 GB
Notification: Performance of simCode: created simulation system equations: time 0.1285/21.31, allocations: 54.55 MB / 5.692 GB, free: 17.91 MB / 0.8267 GB
Notification: Performance of simCode: created of all other equations (e.g. parameter, nominal, assert, etc): time 0.06281/21.37, allocations: 7.813 MB / 5.699 GB, free: 10.54 MB / 0.8267 GB
Notification: Performance of simCode: created linear, non-linear and system jacobian parts: time 0.7112/22.08, allocations: 121.6 MB / 5.818 GB, free: 172.7 MB / 0.8423 GB
Notification: Performance of simCode: some other stuff during SimCode phase: time 0.05884/22.14, allocations: 29.68 MB / 5.847 GB, free: 165.3 MB / 0.8423 GB
Notification: Performance of simCode: all other stuff during SimCode phase: time 0.02895/22.17, allocations: 4.683 MB / 5.852 GB, free: 164.9 MB / 0.8423 GB
Notification: Performance of SimCode: time 1.493e-06/22.17, allocations: 0 / 5.852 GB, free: 164.9 MB / 0.8423 GB
Notification: Performance of Templates: time 7.649/29.82, allocations: 3.292 GB / 9.144 GB, free: 232.8 MB / 0.9985 GB
"
[Timeout remaining time 630]
make -j1 -f Chemical_Chemical.Examples.Hemoglobin.Joels57.makefile [Timeout 660]
(rm -f Chemical_Chemical.Examples.Hemoglobin.Joels57.pipe ; mkfifo Chemical_Chemical.Examples.Hemoglobin.Joels57.pipe ; head -c 1048576 < Chemical_Chemical.Examples.Hemoglobin.Joels57.pipe >> ../files/Chemical_Chemical.Examples.Hemoglobin.Joels57.sim & ./Chemical_Chemical.Examples.Hemoglobin.Joels57  -abortSlowSimulation -alarm=480 -lv LOG_STATS > Chemical_Chemical.Examples.Hemoglobin.Joels57.pipe 2>&1) [Timeout 480]
[Calling sys.exit(0), Time elapsed: 102.91707402607426]
Failed to read output from testmodel.py, exit status != 0:
30.00929516693577 29.837372334 27.144889458
Calling exit ...
<OMPython.OMCSessionZMQ object at 0x7fee90766050>