Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr BioChem_BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel.conf.json
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.0.0+maint.om/package.mo", uses=false)
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.0.0+maint.om/package.mo", uses=false)
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.0.0+maint.om/package.mo", uses=false)
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/BioChem 1.1.2-master/package.mo", uses=false)
Using package BioChem with version 1.1.2 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/BioChem 1.1.2-master/package.mo)
Using package Modelica with version 4.0.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.0.0+maint.om/package.mo)
Using package Complex with version 4.0.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.0.0+maint.om/package.mo)
Using package ModelicaServices with version 4.0.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.0.0+maint.om/package.mo)
Running command: "" <> buildModelFMU(BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel,fileNamePrefix="BioChem_BioChem_Examples_GlucoseInsulinModel_GlucoseInsulinModel",fmuType="me",version="2.0",platforms={"static"})
"" <> buildModelFMU(BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel,fileNamePrefix="BioChem_BioChem_Examples_GlucoseInsulinModel_GlucoseInsulinModel",fmuType="me",version="2.0",platforms={"static"})
Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.0.0+maint.om/package.mo): time 0.005071/0.005071, allocations: 96.7 kB / 15.73 MB, free: 6.047 MB / 14.72 MB
Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.0.0+maint.om/package.mo): time 0.001268/0.001269, allocations: 194.8 kB / 16.67 MB, free: 5.973 MB / 14.72 MB
Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.0.0+maint.om/package.mo): time 1.488/1.488, allocations: 222.9 MB / 240.4 MB, free: 4.32 MB / 190.1 MB
Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/BioChem 1.1.2-master/package.mo): time 0.1984/0.1984, allocations: 12.26 MB / 302.8 MB, free: 1.234 MB / 238.1 MB
Warning: Ignoring unknown experiment annotation option: Algorithm = "dassl"
Notification: Performance of FrontEnd - loaded program: time 0.001903/0.001903, allocations: 67.91 kB / 418.7 MB, free: 4.832 MB / 350.1 MB
Notification: Performance of FrontEnd - Absyn->SCode: time 0.2544/0.2563, allocations: 52.08 MB / 470.8 MB, free: 16.29 MB / 350.1 MB
Notification: Performance of NFInst.instantiate(BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel): time 0.01039/0.2667, allocations: 8.725 MB / 479.5 MB, free: 10.61 MB / 350.1 MB
Notification: Performance of NFInst.instExpressions: time 0.005882/0.2726, allocations: 2.37 MB / 481.9 MB, free: 8.543 MB / 350.1 MB
Notification: Performance of NFInst.updateImplicitVariability: time 0.001963/0.2746, allocations: 113.6 kB / 482 MB, free: 8.543 MB / 350.1 MB
Notification: Performance of NFTyping.typeComponents: time 0.00123/0.2759, allocations: 376.7 kB / 482.4 MB, free: 8.207 MB / 350.1 MB
Notification: Performance of NFTyping.typeBindings: time 0.001769/0.2777, allocations: 0.5296 MB / 482.9 MB, free: 7.73 MB / 350.1 MB
Notification: Performance of NFTyping.typeClassSections: time 0.001012/0.2787, allocations: 0.5679 MB / 483.5 MB, free: 7.203 MB / 350.1 MB
Notification: Performance of NFFlatten.flatten: time 0.002217/0.281, allocations: 2.34 MB / 485.8 MB, free: 5.73 MB / 350.1 MB
Notification: Performance of NFFlatten.resolveConnections: time 0.001504/0.2825, allocations: 1.281 MB / 487.1 MB, free: 4.973 MB / 350.1 MB
Notification: Performance of NFEvalConstants.evaluate: time 0.001436/0.2839, allocations: 0.9509 MB / 488 MB, free: 4.363 MB / 350.1 MB
Notification: Performance of NFSimplifyModel.simplify: time 0.001174/0.2851, allocations: 1.083 MB / 489.1 MB, free: 3.531 MB / 350.1 MB
Notification: Performance of NFPackage.collectConstants: time 0.0005046/0.2856, allocations: 317.8 kB / 489.4 MB, free: 3.531 MB / 350.1 MB
Notification: Performance of NFFlatten.collectFunctions: time 0.0005488/0.2862, allocations: 317.9 kB / 489.8 MB, free: 3.531 MB / 350.1 MB
Notification: Performance of NFScalarize.scalarize: time 0.0003977/0.2866, allocations: 0.5777 MB / 490.3 MB, free: 3.016 MB / 350.1 MB
Notification: Performance of NFVerifyModel.verify: time 0.001186/0.2878, allocations: 1.255 MB / 491.6 MB, free: 2.094 MB / 350.1 MB
Notification: Performance of NFConvertDAE.convert: time 0.003337/0.2911, allocations: 3.441 MB / 495 MB, free: 15.35 MB / 366.1 MB
Notification: Performance of FrontEnd - DAE generated: time 7.404e-06/0.2911, allocations: 0 / 495 MB, free: 15.35 MB / 366.1 MB
Notification: Performance of FrontEnd: time 1.954e-06/0.2911, allocations: 0 / 495 MB, free: 15.35 MB / 366.1 MB
Notification: Performance of Transformations before backend: time 8.731e-05/0.2912, allocations: 0 / 495 MB, free: 15.35 MB / 366.1 MB
Notification: Model statistics after passing the front-end and creating the data structures used by the back-end:
 * Number of equations: 687
 * Number of variables: 687
Notification: Performance of Generate backend data structure: time 0.005404/0.2967, allocations: 2.398 MB / 497.4 MB, free: 13.62 MB / 366.1 MB
Notification: Performance of prepare preOptimizeDAE: time 5.473e-05/0.2967, allocations: 9.625 kB / 497.4 MB, free: 13.62 MB / 366.1 MB
Notification: Performance of preOpt introduceOutputAliases (simulation): time 0.0004903/0.2972, allocations: 367.5 kB / 497.8 MB, free: 13.32 MB / 366.1 MB
Notification: Performance of preOpt normalInlineFunction (simulation): time 0.0004615/0.2977, allocations: 255.3 kB / 498 MB, free: 13.07 MB / 366.1 MB
Notification: Performance of preOpt evaluateParameters (simulation): time 0.0005843/0.2983, allocations: 421.4 kB / 498.5 MB, free: 12.62 MB / 366.1 MB
Notification: Performance of preOpt simplifyIfEquations (simulation): time 0.0002882/0.2986, allocations: 261.3 kB / 498.7 MB, free: 12.35 MB / 366.1 MB
Notification: Performance of preOpt expandDerOperator (simulation): time 0.0003771/0.299, allocations: 284 kB / 499 MB, free: 12.07 MB / 366.1 MB
Notification: Performance of preOpt clockPartitioning (simulation): time 0.004531/0.3035, allocations: 2.386 MB / 0.4896 GB, free: 9.598 MB / 366.1 MB
Notification: Performance of preOpt findStateOrder (simulation): time 7.97e-05/0.3036, allocations: 15.88 kB / 0.4896 GB, free: 9.582 MB / 366.1 MB
Notification: Performance of preOpt replaceEdgeChange (simulation): time 0.0002183/0.3038, allocations: 108 kB / 0.4897 GB, free: 9.477 MB / 366.1 MB
Notification: Performance of preOpt inlineArrayEqn (simulation): time 5.777e-05/0.3039, allocations: 68 kB / 0.4898 GB, free: 9.41 MB / 366.1 MB
Notification: Performance of preOpt removeEqualRHS (simulation): time 0.003358/0.3073, allocations: 1.675 MB / 0.4914 GB, free: 7.723 MB / 366.1 MB
Warning: The model contains alias variables with redundant start and/or conflicting nominal values. It is recommended to resolve the conflicts, because otherwise the system could be hard to solve. To print the conflicting alias sets and the chosen candidates please use -d=aliasConflicts.
Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.01391/0.3212, allocations: 8.387 MB / 0.4996 GB, free: 15.03 MB / 382.1 MB
Notification: Performance of preOpt comSubExp (simulation): time 0.00249/0.3237, allocations: 1.585 MB / 0.5012 GB, free: 13.32 MB / 382.1 MB
Notification: Performance of preOpt resolveLoops (simulation): time 0.001005/0.3247, allocations: 0.5439 MB / 0.5017 GB, free: 12.77 MB / 382.1 MB
Notification: Performance of preOpt evalFunc (simulation): time 7.111e-05/0.3248, allocations: 17.31 kB / 0.5017 GB, free: 12.75 MB / 382.1 MB
Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 4.212e-05/0.3249, allocations: 55.8 kB / 0.5018 GB, free: 12.69 MB / 382.1 MB
Notification: Performance of pre-optimization done (n=139): time 2.986e-06/0.3249, allocations: 0 / 0.5018 GB, free: 12.69 MB / 382.1 MB
Notification: Performance of matching and sorting (n=171): time 0.02789/0.3528, allocations: 9.237 MB / 0.5108 GB, free: 3.398 MB / 382.1 MB
Notification: Performance of inlineWhenForInitialization (initialization): time 0.0001154/0.3529, allocations: 175.5 kB / 0.511 GB, free: 3.191 MB / 382.1 MB
Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.0006689/0.3536, allocations: 493.8 kB / 0.5114 GB, free: 2.703 MB / 382.1 MB
Notification: Performance of collectPreVariables (initialization): time 0.0001007/0.3537, allocations: 57.77 kB / 0.5115 GB, free: 2.641 MB / 382.1 MB
Notification: Performance of collectInitialEqns (initialization): time 0.0007051/0.3544, allocations: 0.9854 MB / 0.5125 GB, free: 1.645 MB / 382.1 MB
Notification: Performance of collectInitialBindings (initialization): time 0.0005908/0.355, allocations: 0.6507 MB / 0.5131 GB, free: 0.9883 MB / 382.1 MB
Notification: Performance of simplifyInitialFunctions (initialization): time 0.0005143/0.3556, allocations: 348.1 kB / 0.5134 GB, free: 0.6445 MB / 382.1 MB
Notification: Performance of setup shared object (initialization): time 0.0001883/0.3557, allocations: 322 kB / 0.5137 GB, free: 332 kB / 382.1 MB
Notification: Performance of preBalanceInitialSystem (initialization): time 0.001351/0.3571, allocations: 0.6771 MB / 0.5144 GB, free: 15.64 MB / 398.1 MB
Notification: Performance of partitionIndependentBlocks (initialization): time 0.001665/0.3588, allocations: 1.184 MB / 0.5155 GB, free: 14.18 MB / 398.1 MB
Notification: Performance of analyzeInitialSystem (initialization): time 0.017/0.3758, allocations: 4.72 MB / 0.5202 GB, free: 9.199 MB / 398.1 MB
Notification: Performance of solveInitialSystemEqSystem (initialization): time 1.858e-05/0.3759, allocations: 8 kB / 0.5202 GB, free: 9.191 MB / 398.1 MB
Notification: Performance of matching and sorting (n=291) (initialization): time 0.003786/0.3797, allocations: 2.114 MB / 0.5222 GB, free: 7.07 MB / 398.1 MB
Notification: Performance of prepare postOptimizeDAE: time 4.189e-05/0.3797, allocations: 21.5 kB / 0.5222 GB, free: 7.051 MB / 398.1 MB
Notification: Performance of postOpt simplifyComplexFunction (initialization): time 2.395e-05/0.3798, allocations: 20.12 kB / 0.5223 GB, free: 7.031 MB / 398.1 MB
Notification: Performance of postOpt tearingSystem (initialization): time 5.408e-05/0.3798, allocations: 32 kB / 0.5223 GB, free: 7 MB / 398.1 MB
Notification: Performance of postOpt solveSimpleEquations (initialization): time 0.002587/0.3824, allocations: 0.6436 MB / 0.5229 GB, free: 6.355 MB / 398.1 MB
Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 7.143e-05/0.3825, allocations: 43.86 kB / 0.523 GB, free: 6.312 MB / 398.1 MB
Notification: Performance of postOpt simplifyAllExpressions (initialization): time 0.001075/0.3836, allocations: 75.94 kB / 0.523 GB, free: 6.238 MB / 398.1 MB
Notification: Performance of postOpt collapseArrayExpressions (initialization): time 0.000154/0.3838, allocations: 92.06 kB / 0.5231 GB, free: 6.148 MB / 398.1 MB
Warning: Assuming fixed start value for the following 41 variables:
         V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer )  "Compartment volume" type: Real
         adiposeTissue1.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer )  "Compartment volume" type: Real
         GlucoseRenalExcretion.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer )  "Compartment volume" type: Real
         GlucoseRenalExcretion.E.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         UtilizationMuscleTissue.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer )  "Compartment volume" type: Real
         UtilizationMuscleTissue.U_idm.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         GastroIntestinalTract.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer )  "Compartment volume" type: Real
         GastroIntestinalTract.GlucoseIntake.c:VARIABLE(min = 0.0 start = 78000.0 unit = "mol/l" fixed = true stateSelect=StateSelect.prefer )  "Current concentration of substance (mM)" type: Real
         TissueGlucose.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer )  "Compartment volume" type: Real
         PlasmaGlucose.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer )  "Compartment volume" type: Real
         PlasmaInsulin.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer )  "Compartment volume" type: Real
         LiverInsulin.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer )  "Compartment volume" type: Real
         EndogenousGlucoseProduction.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer )  "Compartment volume" type: Real
         EndogenousGlucoseProduction.I_po.c:VARIABLE(min = 0.0 start = 3.6 unit = "mol/l" fixed = true stateSelect=StateSelect.prefer )  "Current concentration of substance (mM)" type: Real
         BetaCell.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer )  "Compartment volume" type: Real
         BetaCell.Y.c:VARIABLE(min = 0.0 start = 0.0 unit = "mol/l" fixed = true stateSelect=StateSelect.prefer )  "Current concentration of substance (mM)" type: Real
         adiposeTissue1.adipocyte1.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer )  "Compartment volume" type: Real
         adiposeTissue1.adipocyte1.IR.c:VARIABLE(min = 0.0 start = 2.34e12 unit = "mol/l" fixed = true stateSelect=StateSelect.prefer )  "Current concentration of substance (mM)" type: Real
         adiposeTissue1.adipocyte1.IRS1.c:VARIABLE(min = 0.0 start = 1.61e10 unit = "mol/l" fixed = true stateSelect=StateSelect.prefer )  "Current concentration of substance (mM)" type: Real
         adiposeTissue1.adipocyte1.PKB.c:VARIABLE(min = 0.0 start = 1.68e7 unit = "mol/l" fixed = true stateSelect=StateSelect.prefer )  "Current concentration of substance (mM)" type: Real
         adiposeTissue1.adipocyte1.GLUT4_CYTOSOL.c:VARIABLE(min = 0.0 start = 5.8e8 unit = "mol/l" fixed = true stateSelect=StateSelect.prefer )  "Current concentration of substance (mM)" type: Real
         adiposeTissue1.adipocyte1.IR_insulin.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         adiposeTissue1.adipocyte1.GLUT4_MEMBRANE.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         adiposeTissue1.adipocyte1.GlucoseUtilization.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         adiposeTissue1.adipocyte1.PKB_P.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         adiposeTissue1.adipocyte1.IRS1_P.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         BetaCell.G_p.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         EndogenousGlucoseProduction.End.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         EndogenousGlucoseProduction.I_d.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         EndogenousGlucoseProduction.I_1.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         LiverInsulin.Deg.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         LiverInsulin.I_l.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         UtilizationMuscleTissue.UtilizationReaction.X:VARIABLE(min = 0.0 unit = "mol/l" fixed = true )  type: Real
         PlasmaInsulin.Deg.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         PlasmaInsulin.I_p.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         PlasmaGlucose.U_ii.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         TissueGlucose.G_t.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         GastroIntestinalTract.End.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         GastroIntestinalTract.Q_sto1.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         GastroIntestinalTract.Q_gut.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         GastroIntestinalTract.Q_sto2.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
Notification: Model statistics after passing the back-end for initialization:
 * Number of independent subsystems: 86
 * Number of states: 0 ()
 * Number of discrete variables: 0 ()
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for initialization (291):
 * Single equations (assignments): 291
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 0
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 0
 * Mixed (continuous/discrete) equation systems: 0
Notification: Performance of prepare postOptimizeDAE: time 0.001271/0.385, allocations: 0.6175 MB / 0.5237 GB, free: 5.547 MB / 398.1 MB
Notification: Performance of postOpt lateInlineFunction (simulation): time 0.0002783/0.3853, allocations: 111.3 kB / 0.5238 GB, free: 5.438 MB / 398.1 MB
Notification: Performance of postOpt wrapFunctionCalls (simulation): time 0.002833/0.3882, allocations: 1.428 MB / 0.5252 GB, free: 4.004 MB / 398.1 MB
Notification: Performance of postOpt inlineArrayEqn (simulation): time 2.043e-05/0.3882, allocations: 16 kB / 0.5252 GB, free: 3.988 MB / 398.1 MB
Notification: Performance of postOpt constantLinearSystem (simulation): time 1.038e-05/0.3882, allocations: 7.938 kB / 0.5253 GB, free: 3.98 MB / 398.1 MB
Notification: Performance of postOpt simplifysemiLinear (simulation): time 1.944e-05/0.3882, allocations: 7.969 kB / 0.5253 GB, free: 3.973 MB / 398.1 MB
Notification: Performance of postOpt removeSimpleEquations (simulation): time 0.006975/0.3952, allocations: 3.566 MB / 0.5287 GB, free: 344 kB / 398.1 MB
Notification: Performance of postOpt simplifyComplexFunction (simulation): time 1.21e-05/0.3953, allocations: 4 kB / 0.5287 GB, free: 340 kB / 398.1 MB
Notification: Performance of postOpt solveSimpleEquations (simulation): time 0.002497/0.3978, allocations: 483.4 kB / 0.5292 GB, free: 15.86 MB / 414.1 MB
Notification: Performance of postOpt tearingSystem (simulation): time 2.254e-05/0.3978, allocations: 8 kB / 0.5292 GB, free: 15.85 MB / 414.1 MB
Notification: Performance of postOpt inputDerivativesUsed (simulation): time 0.0001577/0.398, allocations: 55.91 kB / 0.5293 GB, free: 15.79 MB / 414.1 MB
Notification: Performance of postOpt calculateStrongComponentJacobians (simulation): time 1.496e-05/0.398, allocations: 8 kB / 0.5293 GB, free: 15.79 MB / 414.1 MB
Notification: Performance of postOpt calculateStateSetsJacobians (simulation): time 4.408e-06/0.398, allocations: 4 kB / 0.5293 GB, free: 15.78 MB / 414.1 MB
Notification: Performance of postOpt symbolicJacobian (simulation): time 0.004086/0.4021, allocations: 2.522 MB / 0.5317 GB, free: 13.23 MB / 414.1 MB
Notification: Performance of postOpt removeConstants (simulation): time 0.0002775/0.4024, allocations: 164.4 kB / 0.5319 GB, free: 13.05 MB / 414.1 MB
Notification: Performance of postOpt simplifyTimeIndepFuncCalls (simulation): time 0.0001672/0.4026, allocations: 51.94 kB / 0.532 GB, free: 13 MB / 414.1 MB
Notification: Performance of postOpt simplifyAllExpressions (simulation): time 0.0007546/0.4033, allocations: 39.98 kB / 0.532 GB, free: 12.96 MB / 414.1 MB
Notification: Performance of postOpt findZeroCrossings (simulation): time 0.0002145/0.4035, allocations: 113.1 kB / 0.5321 GB, free: 12.85 MB / 414.1 MB
Notification: Performance of postOpt collapseArrayExpressions (simulation): time 9.16e-05/0.4036, allocations: 47.97 kB / 0.5321 GB, free: 12.8 MB / 414.1 MB
Notification: Performance of sorting global known variables: time 0.0003988/0.404, allocations: 302.9 kB / 0.5324 GB, free: 12.51 MB / 414.1 MB
Notification: Performance of sort global known variables: time 1.31e-07/0.4041, allocations: 0 / 0.5324 GB, free: 12.51 MB / 414.1 MB
Notification: Performance of remove unused functions: time 0.001466/0.4055, allocations: 424 kB / 0.5328 GB, free: 12.09 MB / 414.1 MB
Notification: Model statistics after passing the back-end for simulation:
 * Number of independent subsystems: 7
 * Number of states: 41 (GastroIntestinalTract.V,GastroIntestinalTract.Q_sto2.n,GastroIntestinalTract.Q_gut.n,GastroIntestinalTract.Q_sto1.n,GastroIntestinalTract.GlucoseIntake.c,GastroIntestinalTract.End.n,TissueGlucose.V,TissueGlucose.G_t.n,PlasmaGlucose.V,PlasmaGlucose.U_ii.n,PlasmaInsulin.V,PlasmaInsulin.I_p.n,PlasmaInsulin.Deg.n,UtilizationMuscleTissue.UtilizationReaction.X,LiverInsulin.V,LiverInsulin.I_l.n,LiverInsulin.Deg.n,EndogenousGlucoseProduction.V,EndogenousGlucoseProduction.I_1.n,EndogenousGlucoseProduction.I_d.n,EndogenousGlucoseProduction.End.n,EndogenousGlucoseProduction.I_po.c,BetaCell.V,BetaCell.G_p.n,BetaCell.Y.c,adiposeTissue1.adipocyte1.V,adiposeTissue1.adipocyte1.IR.c,adiposeTissue1.adipocyte1.IRS1.c,adiposeTissue1.adipocyte1.IRS1_P.n,adiposeTissue1.adipocyte1.PKB.c,adiposeTissue1.adipocyte1.PKB_P.n,adiposeTissue1.adipocyte1.GlucoseUtilization.n,adiposeTissue1.adipocyte1.GLUT4_MEMBRANE.n,adiposeTissue1.adipocyte1.GLUT4_CYTOSOL.c,adiposeTissue1.adipocyte1.IR_insulin.n,V,adiposeTissue1.V,UtilizationMuscleTissue.V,UtilizationMuscleTissue.U_idm.n,GlucoseRenalExcretion.V,GlucoseRenalExcretion.E.n)
 * Number of discrete variables: 0 ()
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for simulation (173):
 * Single equations (assignments): 173
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 0
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 0
 * Mixed (continuous/discrete) equation systems: 0
Notification: Performance of Backend phase and start with SimCode phase: time 0.004358/0.4099, allocations: 3.122 MB / 0.5359 GB, free: 8.945 MB / 414.1 MB
Notification: Performance of simCode: created initialization part: time 0.003228/0.4131, allocations: 1.656 MB / 0.5375 GB, free: 7.293 MB / 414.1 MB
Notification: Performance of simCode: created event and clocks part: time 5.33e-06/0.4132, allocations: 0 / 0.5375 GB, free: 7.293 MB / 414.1 MB
Notification: Performance of simCode: created simulation system equations: time 0.001276/0.4145, allocations: 0.7529 MB / 0.5382 GB, free: 6.539 MB / 414.1 MB
Notification: Performance of simCode: created of all other equations (e.g. parameter, nominal, assert, etc): time 0.001299/0.4158, allocations: 220.8 kB / 0.5384 GB, free: 6.324 MB / 414.1 MB
Notification: Performance of simCode: created linear, non-linear and system jacobian parts: time 0.02132/0.4371, allocations: 13.14 MB / 0.5513 GB, free: 8.363 MB / 430.1 MB
Notification: Performance of simCode: some other stuff during SimCode phase: time 0.00124/0.4384, allocations: 1.37 MB / 0.5526 GB, free: 6.957 MB / 430.1 MB
Notification: Performance of simCode: alias equations: time 0.0008584/0.4393, allocations: 161.5 kB / 0.5528 GB, free: 6.797 MB / 430.1 MB
Notification: Performance of simCode: all other stuff during SimCode phase: time 0.00112/0.4404, allocations: 0.7804 MB / 0.5535 GB, free: 6.016 MB / 430.1 MB
Notification: Performance of SimCode: time 1.102e-06/0.4404, allocations: 7.938 kB / 0.5535 GB, free: 6.008 MB / 430.1 MB
Notification: Performance of buildModelFMU: Generate the FMI files: time 0.06758/0.508, allocations: 28.86 MB / 0.5817 GB, free: 9.371 MB / 462.1 MB
Notification: Performance of buildModelFMU: Generate platform static: time 11.36/11.87, allocations: 11.95 kB / 0.5817 GB, free: 9.363 MB / 462.1 MB
(rm -f BioChem_BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel.pipe ; mkfifo BioChem_BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel.pipe ; head -c 1048576 < BioChem_BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel.pipe >> ../files/BioChem_BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel.sim & python3 -m fmpy simulate  --output-file BioChem_BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel_res.csv --start-time 0 --stop-time 420 --timeout 50 --relative-tolerance 1e-06 --interface-type ModelExchange --solver CVode --output-interval 420 BioChem_BioChem_Examples_GlucoseInsulinModel_GlucoseInsulinModel.fmu > BioChem_BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel.pipe 2>&1)