Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr BioChem_BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel.conf.json loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.0.0+maint.om/package.mo", uses=false) loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.0.0+maint.om/package.mo", uses=false) loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.0.0+maint.om/package.mo", uses=false) loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/BioChem 1.1.2-master/package.mo", uses=false) Using package BioChem with version 1.1.2 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/BioChem 1.1.2-master/package.mo) Using package Modelica with version 4.0.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.0.0+maint.om/package.mo) Using package Complex with version 4.0.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.0.0+maint.om/package.mo) Using package ModelicaServices with version 4.0.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.0.0+maint.om/package.mo) Running command: "" <> buildModelFMU(BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel,fileNamePrefix="BioChem_BioChem_Examples_GlucoseInsulinModel_GlucoseInsulinModel",fmuType="me",version="2.0",platforms={"static"}) "" <> buildModelFMU(BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel,fileNamePrefix="BioChem_BioChem_Examples_GlucoseInsulinModel_GlucoseInsulinModel",fmuType="me",version="2.0",platforms={"static"}) Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.0.0+maint.om/package.mo): time 0.001084/0.001084, allocations: 108 kB / 15.61 MB, free: 128 kB / 14.72 MB Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.0.0+maint.om/package.mo): time 0.001103/0.001103, allocations: 195.5 kB / 16.53 MB, free: 6.668 MB / 14.72 MB Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.0.0+maint.om/package.mo): time 1.355/1.355, allocations: 222.9 MB / 240.2 MB, free: 4.379 MB / 190.1 MB Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/BioChem 1.1.2-master/package.mo): time 0.1871/0.1871, allocations: 12.27 MB / 302.7 MB, free: 1.25 MB / 238.1 MB Warning: Ignoring unknown experiment annotation option: Algorithm = "dassl" Notification: Performance of FrontEnd - loaded program: time 0.001346/0.001346, allocations: 63.91 kB / 365.9 MB, free: 9.691 MB / 302.1 MB Notification: Performance of FrontEnd - Absyn->SCode: time 0.1161/0.1175, allocations: 52.08 MB / 418 MB, free: 5.504 MB / 350.1 MB Notification: Performance of NFInst.instantiate(BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel): time 0.194/0.3115, allocations: 8.718 MB / 426.7 MB, free: 36.16 MB / 350.1 MB Notification: Performance of NFInst.instExpressions: time 0.004819/0.3164, allocations: 2.359 MB / 429 MB, free: 35.7 MB / 350.1 MB Notification: Performance of NFInst.updateImplicitVariability: time 0.001181/0.3176, allocations: 113.3 kB / 429.1 MB, free: 35.7 MB / 350.1 MB Notification: Performance of NFTyping.typeComponents: time 0.0007755/0.3184, allocations: 385.8 kB / 429.5 MB, free: 35.57 MB / 350.1 MB Notification: Performance of NFTyping.typeBindings: time 0.001206/0.3197, allocations: 0.5213 MB / 430 MB, free: 35.19 MB / 350.1 MB Notification: Performance of NFTyping.typeClassSections: time 0.00117/0.3208, allocations: 0.5763 MB / 430.6 MB, free: 34.85 MB / 350.1 MB Notification: Performance of NFFlatten.flatten: time 0.002087/0.3229, allocations: 2.313 MB / 432.9 MB, free: 33.6 MB / 350.1 MB Notification: Performance of NFFlatten.resolveConnections: time 0.001429/0.3244, allocations: 1.29 MB / 434.2 MB, free: 33.04 MB / 350.1 MB Notification: Performance of NFEvalConstants.evaluate: time 0.001131/0.3255, allocations: 0.9501 MB / 435.2 MB, free: 32.52 MB / 350.1 MB Notification: Performance of NFSimplifyModel.simplify: time 0.0009295/0.3265, allocations: 1.081 MB / 436.3 MB, free: 31.9 MB / 350.1 MB Notification: Performance of NFPackage.collectConstants: time 0.000354/0.3268, allocations: 317.2 kB / 436.6 MB, free: 31.9 MB / 350.1 MB Notification: Performance of NFFlatten.collectFunctions: time 0.0003796/0.3272, allocations: 317.9 kB / 436.9 MB, free: 31.9 MB / 350.1 MB Notification: Performance of NFScalarize.scalarize: time 0.0003618/0.3276, allocations: 0.5806 MB / 437.5 MB, free: 31.47 MB / 350.1 MB Notification: Performance of NFVerifyModel.verify: time 0.0009077/0.3285, allocations: 1.257 MB / 438.7 MB, free: 30.63 MB / 350.1 MB Notification: Performance of NFConvertDAE.convert: time 0.001945/0.3304, allocations: 3.38 MB / 442.1 MB, free: 29.3 MB / 350.1 MB Notification: Performance of FrontEnd - DAE generated: time 5.601e-06/0.3305, allocations: 0 / 442.1 MB, free: 29.3 MB / 350.1 MB Notification: Performance of FrontEnd: time 1.733e-06/0.3305, allocations: 0 / 442.1 MB, free: 29.3 MB / 350.1 MB Notification: Performance of Transformations before backend: time 4.188e-05/0.3305, allocations: 0 / 442.1 MB, free: 29.3 MB / 350.1 MB Notification: Model statistics after passing the front-end and creating the data structures used by the back-end: * Number of equations: 687 * Number of variables: 687 Notification: Performance of Generate backend data structure: time 0.003565/0.3341, allocations: 2.347 MB / 444.4 MB, free: 27.93 MB / 350.1 MB Notification: Performance of prepare preOptimizeDAE: time 4.939e-05/0.3341, allocations: 10.22 kB / 444.4 MB, free: 27.93 MB / 350.1 MB Notification: Performance of preOpt introduceOutputAliases (simulation): time 0.0003231/0.3345, allocations: 370.4 kB / 444.8 MB, free: 27.7 MB / 350.1 MB Notification: Performance of preOpt normalInlineFunction (simulation): time 0.0003156/0.3348, allocations: 239.9 kB / 445 MB, free: 27.59 MB / 350.1 MB Notification: Performance of preOpt evaluateParameters (simulation): time 0.0002944/0.3351, allocations: 410.7 kB / 445.4 MB, free: 27.2 MB / 350.1 MB Notification: Performance of preOpt simplifyIfEquations (simulation): time 0.000211/0.3353, allocations: 256.1 kB / 445.7 MB, free: 27.05 MB / 350.1 MB Notification: Performance of preOpt expandDerOperator (simulation): time 0.0002838/0.3356, allocations: 284.3 kB / 446 MB, free: 26.95 MB / 350.1 MB Notification: Performance of preOpt clockPartitioning (simulation): time 0.00322/0.3388, allocations: 2.394 MB / 448.4 MB, free: 25.87 MB / 350.1 MB Notification: Performance of preOpt findStateOrder (simulation): time 6.146e-05/0.3389, allocations: 10.47 kB / 448.4 MB, free: 25.87 MB / 350.1 MB Notification: Performance of preOpt replaceEdgeChange (simulation): time 0.0001569/0.3391, allocations: 112.1 kB / 448.5 MB, free: 25.78 MB / 350.1 MB Notification: Performance of preOpt inlineArrayEqn (simulation): time 3.989e-05/0.3391, allocations: 65.59 kB / 448.5 MB, free: 25.78 MB / 350.1 MB Notification: Performance of preOpt removeEqualRHS (simulation): time 0.00265/0.3418, allocations: 1.676 MB / 450.2 MB, free: 25.17 MB / 350.1 MB Warning: The model contains alias variables with redundant start and/or conflicting nominal values. It is recommended to resolve the conflicts, because otherwise the system could be hard to solve. To print the conflicting alias sets and the chosen candidates please use -d=aliasConflicts. Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.009605/0.3514, allocations: 8.494 MB / 458.7 MB, free: 20 MB / 350.1 MB Notification: Performance of preOpt comSubExp (simulation): time 0.001764/0.3532, allocations: 1.585 MB / 460.3 MB, free: 18.97 MB / 350.1 MB Notification: Performance of preOpt resolveLoops (simulation): time 0.0007354/0.3539, allocations: 0.5427 MB / 460.8 MB, free: 18.73 MB / 350.1 MB Notification: Performance of preOpt evalFunc (simulation): time 5.634e-05/0.354, allocations: 16.88 kB / 460.9 MB, free: 18.72 MB / 350.1 MB Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 2.18e-05/0.354, allocations: 54.09 kB / 460.9 MB, free: 18.67 MB / 350.1 MB Notification: Performance of pre-optimization done (n=139): time 3.296e-06/0.354, allocations: 0 / 460.9 MB, free: 18.67 MB / 350.1 MB Notification: Performance of matching and sorting (n=171): time 0.02357/0.3776, allocations: 9.128 MB / 470 MB, free: 15.23 MB / 350.1 MB Notification: Performance of inlineWhenForInitialization (initialization): time 6.327e-05/0.3777, allocations: 175.2 kB / 470.2 MB, free: 15.05 MB / 350.1 MB Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.0005427/0.3782, allocations: 489.8 kB / 470.7 MB, free: 14.8 MB / 350.1 MB Notification: Performance of collectPreVariables (initialization): time 8.542e-05/0.3783, allocations: 51.61 kB / 470.7 MB, free: 14.75 MB / 350.1 MB Notification: Performance of collectInitialEqns (initialization): time 0.0004158/0.3788, allocations: 0.951 MB / 471.7 MB, free: 14.02 MB / 350.1 MB Notification: Performance of collectInitialBindings (initialization): time 0.0003715/0.3791, allocations: 0.6297 MB / 472.3 MB, free: 13.51 MB / 350.1 MB Notification: Performance of simplifyInitialFunctions (initialization): time 0.0004239/0.3796, allocations: 348.4 kB / 472.7 MB, free: 13.34 MB / 350.1 MB Notification: Performance of setup shared object (initialization): time 5.606e-05/0.3796, allocations: 327.9 kB / 473 MB, free: 13.02 MB / 350.1 MB Notification: Performance of preBalanceInitialSystem (initialization): time 0.001096/0.3807, allocations: 0.6689 MB / 473.7 MB, free: 12.75 MB / 350.1 MB Notification: Performance of partitionIndependentBlocks (initialization): time 0.001278/0.382, allocations: 1.18 MB / 474.8 MB, free: 11.75 MB / 350.1 MB Notification: Performance of analyzeInitialSystem (initialization): time 0.01495/0.397, allocations: 4.809 MB / 479.6 MB, free: 9.637 MB / 350.1 MB Notification: Performance of solveInitialSystemEqSystem (initialization): time 1.581e-05/0.397, allocations: 7.062 kB / 479.6 MB, free: 9.637 MB / 350.1 MB Notification: Performance of matching and sorting (n=291) (initialization): time 0.003522/0.4006, allocations: 2.115 MB / 481.8 MB, free: 8.719 MB / 350.1 MB Notification: Performance of prepare postOptimizeDAE: time 3.421e-05/0.4006, allocations: 16.38 kB / 481.8 MB, free: 8.715 MB / 350.1 MB Notification: Performance of postOpt simplifyComplexFunction (initialization): time 2.655e-05/0.4007, allocations: 19.66 kB / 481.8 MB, free: 8.715 MB / 350.1 MB Notification: Performance of postOpt tearingSystem (initialization): time 4.782e-05/0.4007, allocations: 31.56 kB / 481.8 MB, free: 8.715 MB / 350.1 MB Notification: Performance of postOpt solveSimpleEquations (initialization): time 0.002485/0.4032, allocations: 0.6391 MB / 482.5 MB, free: 8.66 MB / 350.1 MB Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 5.661e-05/0.4033, allocations: 42.78 kB / 482.5 MB, free: 8.652 MB / 350.1 MB Notification: Performance of postOpt simplifyAllExpressions (initialization): time 0.0009189/0.4042, allocations: 80.36 kB / 482.6 MB, free: 8.613 MB / 350.1 MB Notification: Performance of postOpt collapseArrayExpressions (initialization): time 0.0001146/0.4043, allocations: 96.41 kB / 482.7 MB, free: 8.59 MB / 350.1 MB Warning: Assuming fixed start value for the following 41 variables: V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer ) "Compartment volume" type: Real adiposeTissue1.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer ) "Compartment volume" type: Real GlucoseRenalExcretion.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer ) "Compartment volume" type: Real GlucoseRenalExcretion.E.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer ) "Number of moles of substance in pool (mol)" type: Real UtilizationMuscleTissue.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer ) "Compartment volume" type: Real UtilizationMuscleTissue.U_idm.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer ) "Number of moles of substance in pool (mol)" type: Real GastroIntestinalTract.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer ) "Compartment volume" type: Real GastroIntestinalTract.GlucoseIntake.c:VARIABLE(min = 0.0 start = 78000.0 unit = "mol/l" fixed = true stateSelect=StateSelect.prefer ) "Current concentration of substance (mM)" type: Real TissueGlucose.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer ) "Compartment volume" type: Real PlasmaGlucose.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer ) "Compartment volume" type: Real PlasmaInsulin.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer ) "Compartment volume" type: Real LiverInsulin.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer ) "Compartment volume" type: Real EndogenousGlucoseProduction.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer ) "Compartment volume" type: Real EndogenousGlucoseProduction.I_po.c:VARIABLE(min = 0.0 start = 3.6 unit = "mol/l" fixed = true stateSelect=StateSelect.prefer ) "Current concentration of substance (mM)" type: Real BetaCell.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer ) "Compartment volume" type: Real BetaCell.Y.c:VARIABLE(min = 0.0 start = 0.0 unit = "mol/l" fixed = true stateSelect=StateSelect.prefer ) "Current concentration of substance (mM)" type: Real adiposeTissue1.adipocyte1.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer ) "Compartment volume" type: Real adiposeTissue1.adipocyte1.IR.c:VARIABLE(min = 0.0 start = 2340000000000.0 unit = "mol/l" fixed = true stateSelect=StateSelect.prefer ) "Current concentration of substance (mM)" type: Real adiposeTissue1.adipocyte1.IRS1.c:VARIABLE(min = 0.0 start = 16100000000.0 unit = "mol/l" fixed = true stateSelect=StateSelect.prefer ) "Current concentration of substance (mM)" type: Real adiposeTissue1.adipocyte1.PKB.c:VARIABLE(min = 0.0 start = 16800000.0 unit = "mol/l" fixed = true stateSelect=StateSelect.prefer ) "Current concentration of substance (mM)" type: Real adiposeTissue1.adipocyte1.GLUT4_CYTOSOL.c:VARIABLE(min = 0.0 start = 580000000.0 unit = "mol/l" fixed = true stateSelect=StateSelect.prefer ) "Current concentration of substance (mM)" type: Real adiposeTissue1.adipocyte1.IR_insulin.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer ) "Number of moles of substance in pool (mol)" type: Real adiposeTissue1.adipocyte1.GLUT4_MEMBRANE.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer ) "Number of moles of substance in pool (mol)" type: Real adiposeTissue1.adipocyte1.GlucoseUtilization.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer ) "Number of moles of substance in pool (mol)" type: Real adiposeTissue1.adipocyte1.PKB_P.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer ) "Number of moles of substance in pool (mol)" type: Real adiposeTissue1.adipocyte1.IRS1_P.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer ) "Number of moles of substance in pool (mol)" type: Real BetaCell.G_p.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer ) "Number of moles of substance in pool (mol)" type: Real EndogenousGlucoseProduction.End.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer ) "Number of moles of substance in pool (mol)" type: Real EndogenousGlucoseProduction.I_d.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer ) "Number of moles of substance in pool (mol)" type: Real EndogenousGlucoseProduction.I_1.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer ) "Number of moles of substance in pool (mol)" type: Real LiverInsulin.Deg.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer ) "Number of moles of substance in pool (mol)" type: Real LiverInsulin.I_l.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer ) "Number of moles of substance in pool (mol)" type: Real UtilizationMuscleTissue.UtilizationReaction.X:VARIABLE(min = 0.0 unit = "mol/l" fixed = true ) type: Real PlasmaInsulin.Deg.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer ) "Number of moles of substance in pool (mol)" type: Real PlasmaInsulin.I_p.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer ) "Number of moles of substance in pool (mol)" type: Real PlasmaGlucose.U_ii.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer ) "Number of moles of substance in pool (mol)" type: Real TissueGlucose.G_t.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer ) "Number of moles of substance in pool (mol)" type: Real GastroIntestinalTract.End.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer ) "Number of moles of substance in pool (mol)" type: Real GastroIntestinalTract.Q_sto1.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer ) "Number of moles of substance in pool (mol)" type: Real GastroIntestinalTract.Q_gut.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer ) "Number of moles of substance in pool (mol)" type: Real GastroIntestinalTract.Q_sto2.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer ) "Number of moles of substance in pool (mol)" type: Real Notification: Model statistics after passing the back-end for initialization: * Number of independent subsystems: 86 * Number of states: 0 () * Number of discrete variables: 0 () * Number of discrete states: 0 () * Number of clocked states: 0 () * Top-level inputs: 0 Notification: Strong component statistics for initialization (291): * Single equations (assignments): 291 * Array equations: 0 * Algorithm blocks: 0 * Record equations: 0 * When equations: 0 * If-equations: 0 * Equation systems (not torn): 0 * Torn equation systems: 0 * Mixed (continuous/discrete) equation systems: 0 Notification: Performance of prepare postOptimizeDAE: time 0.001006/0.4053, allocations: 0.6068 MB / 483.3 MB, free: 8.168 MB / 350.1 MB Notification: Performance of postOpt lateInlineFunction (simulation): time 0.0002477/0.4056, allocations: 98.22 kB / 483.4 MB, free: 8.117 MB / 350.1 MB Notification: Performance of postOpt wrapFunctionCalls (simulation): time 0.002431/0.408, allocations: 1.431 MB / 484.8 MB, free: 7.473 MB / 350.1 MB Notification: Performance of postOpt inlineArrayEqn (simulation): time 1.339e-05/0.4081, allocations: 16.22 kB / 484.8 MB, free: 7.473 MB / 350.1 MB Notification: Performance of postOpt constantLinearSystem (simulation): time 8.677e-06/0.4081, allocations: 8.406 kB / 484.8 MB, free: 7.469 MB / 350.1 MB Notification: Performance of postOpt simplifysemiLinear (simulation): time 1.875e-05/0.4081, allocations: 8.531 kB / 484.8 MB, free: 7.469 MB / 350.1 MB Notification: Performance of postOpt removeSimpleEquations (simulation): time 0.006017/0.4141, allocations: 3.59 MB / 488.4 MB, free: 5.801 MB / 350.1 MB Notification: Performance of postOpt simplifyComplexFunction (simulation): time 7.133e-06/0.4141, allocations: 5.562 kB / 488.4 MB, free: 5.797 MB / 350.1 MB Notification: Performance of postOpt solveSimpleEquations (simulation): time 0.002361/0.4165, allocations: 478 kB / 488.9 MB, free: 5.766 MB / 350.1 MB Notification: Performance of postOpt tearingSystem (simulation): time 1.533e-05/0.4165, allocations: 7.578 kB / 488.9 MB, free: 5.766 MB / 350.1 MB Notification: Performance of postOpt inputDerivativesUsed (simulation): time 0.0001295/0.4167, allocations: 62.58 kB / 489 MB, free: 5.73 MB / 350.1 MB Notification: Performance of postOpt calculateStrongComponentJacobians (simulation): time 1.034e-05/0.4167, allocations: 7.484 kB / 489 MB, free: 5.73 MB / 350.1 MB Notification: Performance of postOpt calculateStateSetsJacobians (simulation): time 3.787e-06/0.4167, allocations: 6.688 kB / 489 MB, free: 5.727 MB / 350.1 MB Notification: Performance of postOpt symbolicJacobian (simulation): time 0.003056/0.4198, allocations: 2.509 MB / 491.5 MB, free: 3.641 MB / 350.1 MB Notification: Performance of postOpt removeConstants (simulation): time 0.000139/0.4199, allocations: 152 kB / 491.7 MB, free: 3.473 MB / 350.1 MB Notification: Performance of postOpt simplifyTimeIndepFuncCalls (simulation): time 0.0001478/0.4201, allocations: 55.94 kB / 491.7 MB, free: 3.418 MB / 350.1 MB Notification: Performance of postOpt simplifyAllExpressions (simulation): time 0.0007264/0.4208, allocations: 42.47 kB / 491.7 MB, free: 3.383 MB / 350.1 MB Notification: Performance of postOpt findZeroCrossings (simulation): time 0.0001731/0.421, allocations: 108.8 kB / 491.9 MB, free: 3.32 MB / 350.1 MB Notification: Performance of postOpt collapseArrayExpressions (simulation): time 7.435e-05/0.4211, allocations: 55.34 kB / 491.9 MB, free: 3.277 MB / 350.1 MB Notification: Performance of sorting global known variables: time 0.0002455/0.4213, allocations: 297.9 kB / 492.2 MB, free: 3.023 MB / 350.1 MB Notification: Performance of sort global known variables: time 1e-07/0.4213, allocations: 4 kB / 492.2 MB, free: 3.02 MB / 350.1 MB Notification: Performance of remove unused functions: time 0.001426/0.4228, allocations: 428 kB / 492.6 MB, free: 2.602 MB / 350.1 MB Notification: Model statistics after passing the back-end for simulation: * Number of independent subsystems: 7 * Number of states: 41 (GastroIntestinalTract.V,GastroIntestinalTract.Q_sto2.n,GastroIntestinalTract.Q_gut.n,GastroIntestinalTract.Q_sto1.n,GastroIntestinalTract.GlucoseIntake.c,GastroIntestinalTract.End.n,TissueGlucose.V,TissueGlucose.G_t.n,PlasmaGlucose.V,PlasmaGlucose.U_ii.n,PlasmaInsulin.V,PlasmaInsulin.I_p.n,PlasmaInsulin.Deg.n,UtilizationMuscleTissue.UtilizationReaction.X,LiverInsulin.V,LiverInsulin.I_l.n,LiverInsulin.Deg.n,EndogenousGlucoseProduction.V,EndogenousGlucoseProduction.I_1.n,EndogenousGlucoseProduction.I_d.n,EndogenousGlucoseProduction.End.n,EndogenousGlucoseProduction.I_po.c,BetaCell.V,BetaCell.G_p.n,BetaCell.Y.c,adiposeTissue1.adipocyte1.V,adiposeTissue1.adipocyte1.IR.c,adiposeTissue1.adipocyte1.IRS1.c,adiposeTissue1.adipocyte1.IRS1_P.n,adiposeTissue1.adipocyte1.PKB.c,adiposeTissue1.adipocyte1.PKB_P.n,adiposeTissue1.adipocyte1.GlucoseUtilization.n,adiposeTissue1.adipocyte1.GLUT4_MEMBRANE.n,adiposeTissue1.adipocyte1.GLUT4_CYTOSOL.c,adiposeTissue1.adipocyte1.IR_insulin.n,V,adiposeTissue1.V,UtilizationMuscleTissue.V,UtilizationMuscleTissue.U_idm.n,GlucoseRenalExcretion.V,GlucoseRenalExcretion.E.n) * Number of discrete variables: 0 () * Number of discrete states: 0 () * Number of clocked states: 0 () * Top-level inputs: 0 Notification: Strong component statistics for simulation (173): * Single equations (assignments): 173 * Array equations: 0 * Algorithm blocks: 0 * Record equations: 0 * When equations: 0 * If-equations: 0 * Equation systems (not torn): 0 * Torn equation systems: 0 * Mixed (continuous/discrete) equation systems: 0 Notification: Performance of Backend phase and start with SimCode phase: time 0.00321/0.426, allocations: 3.109 MB / 495.7 MB, free: 15.63 MB / 366.1 MB Notification: Performance of simCode: created initialization part: time 0.004782/0.4308, allocations: 1.724 MB / 497.5 MB, free: 14.05 MB / 366.1 MB Notification: Performance of simCode: created event and clocks part: time 3.196e-06/0.4308, allocations: 4.062 kB / 497.5 MB, free: 14.05 MB / 366.1 MB Notification: Performance of simCode: created simulation system equations: time 0.001184/0.432, allocations: 0.7534 MB / 498.2 MB, free: 13.36 MB / 366.1 MB Notification: Performance of simCode: created of all other equations (e.g. parameter, nominal, assert, etc): time 0.00125/0.4332, allocations: 219 kB / 498.4 MB, free: 13.16 MB / 366.1 MB Notification: Performance of simCode: created linear, non-linear and system jacobian parts: time 0.01949/0.4527, allocations: 13.38 MB / 0.4998 GB, free: 14.89 MB / 382.1 MB Notification: Performance of simCode: some other stuff during SimCode phase: time 0.00139/0.4542, allocations: 1.367 MB / 0.5011 GB, free: 13.49 MB / 382.1 MB Notification: Performance of simCode: alias equations: time 0.0009867/0.4552, allocations: 161.5 kB / 0.5013 GB, free: 13.33 MB / 382.1 MB Notification: Performance of simCode: all other stuff during SimCode phase: time 0.001115/0.4563, allocations: 0.7804 MB / 0.5021 GB, free: 12.55 MB / 382.1 MB Notification: Performance of SimCode: time 1.473e-06/0.4563, allocations: 4 kB / 0.5021 GB, free: 12.54 MB / 382.1 MB Notification: Performance of buildModelFMU: Generate the FMI files: time 0.05929/0.5156, allocations: 28.01 MB / 0.5294 GB, free: 0.8164 MB / 398.1 MB Notification: Performance of buildModelFMU: Generate platform static: time 8.1/8.615, allocations: 4.062 kB / 0.5294 GB, free: 0.8125 MB / 398.1 MB (rm -f BioChem_BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel.pipe ; mkfifo BioChem_BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel.pipe ; head -c 1048576 < BioChem_BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel.pipe >> ../files/BioChem_BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel.sim & python3 -m fmpy simulate --output-file BioChem_BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel_res.csv --start-time 0 --stop-time 420 --timeout 50 --relative-tolerance 1e-06 --interface-type ModelExchange --solver CVode --output-interval 420 BioChem_BioChem_Examples_GlucoseInsulinModel_GlucoseInsulinModel.fmu > BioChem_BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel.pipe 2>&1)