Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries/ --ompython_omhome=/usr BioChem_BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel.conf.json
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.0.0+maint.om/package.mo", uses=false)
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.0.0+maint.om/package.mo", uses=false)
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.0.0+maint.om/package.mo", uses=false)
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/BioChem 1.1.2-master/package.mo", uses=false)
Using package BioChem with version 1.1.2 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/BioChem 1.1.2-master/package.mo)
Using package Modelica with version 4.0.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.0.0+maint.om/package.mo)
Using package Complex with version 4.0.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.0.0+maint.om/package.mo)
Using package ModelicaServices with version 4.0.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.0.0+maint.om/package.mo)
Running command: translateModel(BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel,tolerance=1e-06,outputFormat="empty",numberOfIntervals=-2,variableFilter="",fileNamePrefix="BioChem_BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel")
translateModel(BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel,tolerance=1e-06,outputFormat="empty",numberOfIntervals=-2,variableFilter="",fileNamePrefix="BioChem_BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel")
Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.0.0+maint.om/package.mo): time 0.001494/0.001494, allocations: 111.6 kB / 15.99 MB, free: 6.348 MB / 14.72 MB
Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.0.0+maint.om/package.mo): time 0.00158/0.00158, allocations: 191 kB / 16.91 MB, free: 6.184 MB / 14.72 MB
Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.0.0+maint.om/package.mo): time 1.535/1.535, allocations: 222.9 MB / 240.6 MB, free: 15.43 MB / 206.1 MB
Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/BioChem 1.1.2-master/package.mo): time 0.06434/0.06434, allocations: 12.29 MB / 303 MB, free: 3.477 MB / 238.1 MB
Warning: Ignoring unknown experiment annotation option: Algorithm = "dassl"
Notification: Performance of FrontEnd - loaded program: time 0.001305/0.001305, allocations: 59.91 kB / 365.9 MB, free: 4.484 MB / 302.1 MB
Notification: Performance of FrontEnd - Absyn->SCode: time 0.2994/0.3007, allocations: 52.07 MB / 418 MB, free: 22 MB / 302.1 MB
Notification: Performance of NFInst.instantiate(BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel): time 0.009641/0.3104, allocations: 8.892 MB / 426.9 MB, free: 13.09 MB / 302.1 MB
Notification: Performance of NFInst.instExpressions: time 0.006289/0.3168, allocations: 2.362 MB / 429.2 MB, free: 10.75 MB / 302.1 MB
Notification: Performance of NFInst.updateImplicitVariability: time 0.001842/0.3187, allocations: 120 kB / 429.4 MB, free: 10.63 MB / 302.1 MB
Notification: Performance of NFTyping.typeComponents: time 0.001037/0.3198, allocations: 290.4 kB / 429.6 MB, free: 10.35 MB / 302.1 MB
Notification: Performance of NFTyping.typeBindings: time 0.001406/0.3212, allocations: 444.1 kB / 430.1 MB, free: 9.922 MB / 302.1 MB
Notification: Performance of NFTyping.typeClassSections: time 0.001097/0.3223, allocations: 0.5083 MB / 430.6 MB, free: 9.414 MB / 302.1 MB
Notification: Performance of NFFlatten.flatten: time 0.001821/0.3241, allocations: 2.31 MB / 432.9 MB, free: 7.094 MB / 302.1 MB
Notification: Performance of NFFlatten.resolveConnections: time 0.001321/0.3255, allocations: 1.283 MB / 434.2 MB, free: 5.77 MB / 302.1 MB
Notification: Performance of NFEvalConstants.evaluate: time 0.0009348/0.3264, allocations: 0.9468 MB / 435.1 MB, free: 4.82 MB / 302.1 MB
Notification: Performance of NFSimplifyModel.simplify: time 0.000811/0.3272, allocations: 1.086 MB / 436.2 MB, free: 3.73 MB / 302.1 MB
Notification: Performance of NFPackage.collectConstants: time 0.0002778/0.3275, allocations: 316 kB / 436.5 MB, free: 3.422 MB / 302.1 MB
Notification: Performance of NFFlatten.collectFunctions: time 0.0003017/0.3278, allocations: 316 kB / 436.8 MB, free: 3.113 MB / 302.1 MB
Notification: Performance of NFScalarize.scalarize: time 0.0003316/0.3282, allocations: 0.5815 MB / 437.4 MB, free: 2.531 MB / 302.1 MB
Notification: Performance of NFVerifyModel.verify: time 0.0008604/0.329, allocations: 1.252 MB / 438.7 MB, free: 1.273 MB / 302.1 MB
Notification: Performance of NFConvertDAE.convert: time 0.002246/0.3313, allocations: 2.784 MB / 441.4 MB, free: 14.48 MB / 318.1 MB
Notification: Performance of FrontEnd - DAE generated: time 7.454e-06/0.3313, allocations: 3.531 kB / 441.5 MB, free: 14.48 MB / 318.1 MB
Notification: Performance of FrontEnd: time 3.707e-06/0.3313, allocations: 0 / 441.5 MB, free: 14.48 MB / 318.1 MB
Notification: Performance of Transformations before backend: time 5.388e-05/0.3314, allocations: 4 kB / 441.5 MB, free: 14.48 MB / 318.1 MB
Notification: Model statistics after passing the front-end and creating the data structures used by the back-end:
 * Number of equations: 687
 * Number of variables: 687
Notification: Performance of Generate backend data structure: time 0.004289/0.3357, allocations: 2.345 MB / 443.8 MB, free: 12.09 MB / 318.1 MB
Notification: Performance of prepare preOptimizeDAE: time 4.244e-05/0.3357, allocations: 16.02 kB / 443.8 MB, free: 12.07 MB / 318.1 MB
Notification: Performance of preOpt normalInlineFunction (simulation): time 0.0003627/0.3361, allocations: 234.1 kB / 444 MB, free: 11.84 MB / 318.1 MB
Notification: Performance of preOpt evaluateParameters (simulation): time 0.0004004/0.3365, allocations: 413.2 kB / 444.4 MB, free: 11.4 MB / 318.1 MB
Notification: Performance of preOpt simplifyIfEquations (simulation): time 0.0002641/0.3368, allocations: 257.4 kB / 444.7 MB, free: 11.13 MB / 318.1 MB
Notification: Performance of preOpt expandDerOperator (simulation): time 0.0003405/0.3371, allocations: 276.2 kB / 445 MB, free: 10.86 MB / 318.1 MB
Notification: Performance of preOpt clockPartitioning (simulation): time 0.004038/0.3412, allocations: 2.412 MB / 447.4 MB, free: 8.367 MB / 318.1 MB
Notification: Performance of preOpt findStateOrder (simulation): time 6.999e-05/0.3413, allocations: 7.906 kB / 447.4 MB, free: 8.359 MB / 318.1 MB
Notification: Performance of preOpt replaceEdgeChange (simulation): time 0.0001881/0.3414, allocations: 112 kB / 447.5 MB, free: 8.25 MB / 318.1 MB
Notification: Performance of preOpt inlineArrayEqn (simulation): time 6.354e-05/0.3415, allocations: 64 kB / 447.6 MB, free: 8.188 MB / 318.1 MB
Notification: Performance of preOpt removeEqualRHS (simulation): time 0.003057/0.3446, allocations: 1.675 MB / 449.2 MB, free: 6.5 MB / 318.1 MB
Warning: The model contains alias variables with redundant start and/or conflicting nominal values. It is recommended to resolve the conflicts, because otherwise the system could be hard to solve. To print the conflicting alias sets and the chosen candidates please use -d=aliasConflicts.
Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.01229/0.3569, allocations: 8.45 MB / 457.7 MB, free: 13.74 MB / 334.1 MB
Notification: Performance of preOpt comSubExp (simulation): time 0.002302/0.3592, allocations: 1.586 MB / 459.3 MB, free: 12.03 MB / 334.1 MB
Notification: Performance of preOpt resolveLoops (simulation): time 0.0008993/0.3601, allocations: 0.5377 MB / 459.8 MB, free: 11.48 MB / 334.1 MB
Notification: Performance of preOpt evalFunc (simulation): time 7.535e-05/0.3602, allocations: 21.31 kB / 459.8 MB, free: 11.46 MB / 334.1 MB
Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 4.284e-05/0.3603, allocations: 51.86 kB / 459.9 MB, free: 11.4 MB / 334.1 MB
Notification: Performance of pre-optimization done (n=139): time 3.897e-06/0.3603, allocations: 0 / 459.9 MB, free: 11.4 MB / 334.1 MB
Notification: Performance of matching and sorting (n=171): time 0.02595/0.3862, allocations: 9.118 MB / 469 MB, free: 2.234 MB / 334.1 MB
Notification: Performance of inlineWhenForInitialization (initialization): time 0.0001165/0.3864, allocations: 179.6 kB / 469.2 MB, free: 2.023 MB / 334.1 MB
Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.0006736/0.3871, allocations: 493.6 kB / 469.7 MB, free: 1.531 MB / 334.1 MB
Notification: Performance of collectPreVariables (initialization): time 8.946e-05/0.3872, allocations: 53.7 kB / 469.7 MB, free: 1.473 MB / 334.1 MB
Notification: Performance of collectInitialEqns (initialization): time 0.0007159/0.3879, allocations: 0.9448 MB / 470.7 MB, free: 0.5117 MB / 334.1 MB
Notification: Performance of collectInitialBindings (initialization): time 0.0007849/0.3887, allocations: 0.6277 MB / 471.3 MB, free: 15.88 MB / 350.1 MB
Notification: Performance of simplifyInitialFunctions (initialization): time 0.0004911/0.3892, allocations: 348 kB / 471.6 MB, free: 15.53 MB / 350.1 MB
Notification: Performance of setup shared object (initialization): time 0.000159/0.3894, allocations: 322 kB / 471.9 MB, free: 15.21 MB / 350.1 MB
Notification: Performance of preBalanceInitialSystem (initialization): time 0.001138/0.3905, allocations: 0.6732 MB / 472.6 MB, free: 14.53 MB / 350.1 MB
Notification: Performance of partitionIndependentBlocks (initialization): time 0.001546/0.3921, allocations: 1.176 MB / 473.8 MB, free: 13.08 MB / 350.1 MB
Notification: Performance of analyzeInitialSystem (initialization): time 0.01667/0.4087, allocations: 4.815 MB / 478.6 MB, free: 8 MB / 350.1 MB
Notification: Performance of solveInitialSystemEqSystem (initialization): time 1.758e-05/0.4088, allocations: 4 kB / 478.6 MB, free: 7.996 MB / 350.1 MB
Notification: Performance of matching and sorting (n=291) (initialization): time 0.004152/0.413, allocations: 2.122 MB / 480.7 MB, free: 5.867 MB / 350.1 MB
Notification: Performance of prepare postOptimizeDAE: time 4.016e-05/0.413, allocations: 15.94 kB / 480.7 MB, free: 5.852 MB / 350.1 MB
Notification: Performance of postOpt simplifyComplexFunction (initialization): time 3.198e-05/0.4131, allocations: 20 kB / 480.8 MB, free: 5.832 MB / 350.1 MB
Notification: Performance of postOpt tearingSystem (initialization): time 4.987e-05/0.4131, allocations: 35.94 kB / 480.8 MB, free: 5.797 MB / 350.1 MB
Notification: Performance of postOpt solveSimpleEquations (initialization): time 0.002503/0.4156, allocations: 0.6398 MB / 481.4 MB, free: 5.156 MB / 350.1 MB
Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 4.822e-05/0.4157, allocations: 43.86 kB / 481.5 MB, free: 5.113 MB / 350.1 MB
Notification: Performance of postOpt simplifyAllExpressions (initialization): time 0.001251/0.417, allocations: 151.6 kB / 481.6 MB, free: 4.965 MB / 350.1 MB
Notification: Performance of postOpt collapseArrayExpressions (initialization): time 0.0001304/0.4171, allocations: 88 kB / 481.7 MB, free: 4.879 MB / 350.1 MB
Warning: Assuming fixed start value for the following 41 variables:
         V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer )  "Compartment volume" type: Real
         adiposeTissue1.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer )  "Compartment volume" type: Real
         GlucoseRenalExcretion.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer )  "Compartment volume" type: Real
         GlucoseRenalExcretion.E.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         UtilizationMuscleTissue.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer )  "Compartment volume" type: Real
         UtilizationMuscleTissue.U_idm.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         GastroIntestinalTract.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer )  "Compartment volume" type: Real
         GastroIntestinalTract.GlucoseIntake.c:VARIABLE(min = max(0.0, max(0.0, max(0.0, max(0.0, max(0.0, max(0.0, 0.0)))))) start = 78000.0 unit = "mol/l" fixed = true stateSelect=StateSelect.prefer )  "Current concentration of substance (mM)" type: Real
         TissueGlucose.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer )  "Compartment volume" type: Real
         PlasmaGlucose.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer )  "Compartment volume" type: Real
         PlasmaInsulin.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer )  "Compartment volume" type: Real
         LiverInsulin.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer )  "Compartment volume" type: Real
         EndogenousGlucoseProduction.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer )  "Compartment volume" type: Real
         EndogenousGlucoseProduction.I_po.c:VARIABLE(min = max(0.0, max(0.0, max(0.0, max(0.0, max(0.0, max(0.0, max(0.0, max(0.0, max(0.0, 0.0))))))))) start = 3.6 unit = "mol/l" fixed = true stateSelect=StateSelect.prefer )  "Current concentration of substance (mM)" type: Real
         BetaCell.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer )  "Compartment volume" type: Real
         BetaCell.Y.c:VARIABLE(min = max(0.0, max(0.0, max(0.0, max(0.0, max(0.0, max(0.0, max(0.0, 0.0))))))) start = 0.0 unit = "mol/l" fixed = true stateSelect=StateSelect.prefer )  "Current concentration of substance (mM)" type: Real
         adiposeTissue1.adipocyte1.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer )  "Compartment volume" type: Real
         adiposeTissue1.adipocyte1.IR.c:VARIABLE(min = max(0.0, max(0.0, 0.0)) start = 2340000000000.0 unit = "mol/l" fixed = true stateSelect=StateSelect.prefer )  "Current concentration of substance (mM)" type: Real
         adiposeTissue1.adipocyte1.IRS1.c:VARIABLE(min = max(0.0, max(0.0, 0.0)) start = 16100000000.0 unit = "mol/l" fixed = true stateSelect=StateSelect.prefer )  "Current concentration of substance (mM)" type: Real
         adiposeTissue1.adipocyte1.PKB.c:VARIABLE(min = max(0.0, max(0.0, 0.0)) start = 16800000.0 unit = "mol/l" fixed = true stateSelect=StateSelect.prefer )  "Current concentration of substance (mM)" type: Real
         adiposeTissue1.adipocyte1.GLUT4_CYTOSOL.c:VARIABLE(min = max(0.0, max(0.0, 0.0)) start = 580000000.0 unit = "mol/l" fixed = true stateSelect=StateSelect.prefer )  "Current concentration of substance (mM)" type: Real
         adiposeTissue1.adipocyte1.IR_insulin.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         adiposeTissue1.adipocyte1.GLUT4_MEMBRANE.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         adiposeTissue1.adipocyte1.GlucoseUtilization.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         adiposeTissue1.adipocyte1.PKB_P.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         adiposeTissue1.adipocyte1.IRS1_P.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         BetaCell.G_p.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         EndogenousGlucoseProduction.End.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         EndogenousGlucoseProduction.I_d.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         EndogenousGlucoseProduction.I_1.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         LiverInsulin.Deg.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         LiverInsulin.I_l.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         UtilizationMuscleTissue.UtilizationReaction.X:VARIABLE(min = 0.0 unit = "mol/l" fixed = true )  type: Real
         PlasmaInsulin.Deg.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         PlasmaInsulin.I_p.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         PlasmaGlucose.U_ii.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         TissueGlucose.G_t.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         GastroIntestinalTract.End.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         GastroIntestinalTract.Q_sto1.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         GastroIntestinalTract.Q_gut.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         GastroIntestinalTract.Q_sto2.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
Notification: Model statistics after passing the back-end for initialization:
 * Number of independent subsystems: 86
 * Number of states: 0 ()
 * Number of discrete variables: 0 ()
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for initialization (291):
 * Single equations (assignments): 291
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 0
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 0
 * Mixed (continuous/discrete) equation systems: 0
Notification: Performance of prepare postOptimizeDAE: time 0.001748/0.4189, allocations: 0.6601 MB / 482.4 MB, free: 4.238 MB / 350.1 MB
Notification: Performance of postOpt lateInlineFunction (simulation): time 0.0002718/0.4191, allocations: 102.8 kB / 482.5 MB, free: 4.137 MB / 350.1 MB
Notification: Performance of postOpt wrapFunctionCalls (simulation): time 0.002671/0.4218, allocations: 1.436 MB / 483.9 MB, free: 2.688 MB / 350.1 MB
Notification: Performance of postOpt inlineArrayEqn (simulation): time 1.656e-05/0.4218, allocations: 16 kB / 483.9 MB, free: 2.672 MB / 350.1 MB
Notification: Performance of postOpt constantLinearSystem (simulation): time 1.015e-05/0.4219, allocations: 0 / 483.9 MB, free: 2.672 MB / 350.1 MB
Notification: Performance of postOpt simplifysemiLinear (simulation): time 1.826e-05/0.4219, allocations: 11.97 kB / 483.9 MB, free: 2.66 MB / 350.1 MB
Notification: Performance of postOpt removeSimpleEquations (simulation): time 0.006961/0.4289, allocations: 3.591 MB / 487.5 MB, free: 15 MB / 366.1 MB
Notification: Performance of postOpt simplifyComplexFunction (simulation): time 1.127e-05/0.4289, allocations: 7.938 kB / 487.5 MB, free: 15 MB / 366.1 MB
Notification: Performance of postOpt solveSimpleEquations (simulation): time 0.002478/0.4314, allocations: 479.4 kB / 488 MB, free: 14.53 MB / 366.1 MB
Notification: Performance of postOpt tearingSystem (simulation): time 1.276e-05/0.4314, allocations: 12 kB / 488 MB, free: 14.52 MB / 366.1 MB
Notification: Performance of postOpt inputDerivativesUsed (simulation): time 0.0001365/0.4316, allocations: 63.91 kB / 488.1 MB, free: 14.45 MB / 366.1 MB
Notification: Performance of postOpt calculateStrongComponentJacobians (simulation): time 8.937e-06/0.4316, allocations: 4 kB / 488.1 MB, free: 14.45 MB / 366.1 MB
Notification: Performance of postOpt calculateStateSetsJacobians (simulation): time 2.785e-06/0.4316, allocations: 4 kB / 488.1 MB, free: 14.45 MB / 366.1 MB
Notification: Performance of postOpt symbolicJacobian (simulation): time 0.003832/0.4354, allocations: 2.5 MB / 490.6 MB, free: 11.92 MB / 366.1 MB
Notification: Performance of postOpt removeConstants (simulation): time 0.0003546/0.4358, allocations: 159.9 kB / 490.7 MB, free: 11.75 MB / 366.1 MB
Notification: Performance of postOpt simplifyTimeIndepFuncCalls (simulation): time 0.0001653/0.436, allocations: 51.94 kB / 490.8 MB, free: 11.7 MB / 366.1 MB
Notification: Performance of postOpt simplifyAllExpressions (simulation): time 0.000945/0.4369, allocations: 103.6 kB / 490.9 MB, free: 11.59 MB / 366.1 MB
Notification: Performance of postOpt findZeroCrossings (simulation): time 0.0002024/0.4371, allocations: 105.1 kB / 491 MB, free: 11.49 MB / 366.1 MB
Notification: Performance of postOpt collapseArrayExpressions (simulation): time 0.0001014/0.4372, allocations: 51.97 kB / 491 MB, free: 11.44 MB / 366.1 MB
Notification: Performance of sorting global known variables: time 0.0003832/0.4376, allocations: 306.9 kB / 491.3 MB, free: 11.14 MB / 366.1 MB
Notification: Performance of sort global known variables: time 1.21e-07/0.4376, allocations: 3.938 kB / 491.4 MB, free: 11.14 MB / 366.1 MB
Notification: Performance of remove unused functions: time 0.001724/0.4394, allocations: 424 kB / 491.8 MB, free: 10.72 MB / 366.1 MB
Notification: Model statistics after passing the back-end for simulation:
 * Number of independent subsystems: 7
 * Number of states: 41 (GastroIntestinalTract.V,GastroIntestinalTract.Q_sto2.n,GastroIntestinalTract.Q_gut.n,GastroIntestinalTract.Q_sto1.n,GastroIntestinalTract.GlucoseIntake.c,GastroIntestinalTract.End.n,TissueGlucose.V,TissueGlucose.G_t.n,PlasmaGlucose.V,PlasmaGlucose.U_ii.n,PlasmaInsulin.V,PlasmaInsulin.I_p.n,PlasmaInsulin.Deg.n,UtilizationMuscleTissue.UtilizationReaction.X,LiverInsulin.V,LiverInsulin.I_l.n,LiverInsulin.Deg.n,EndogenousGlucoseProduction.V,EndogenousGlucoseProduction.I_1.n,EndogenousGlucoseProduction.I_d.n,EndogenousGlucoseProduction.End.n,EndogenousGlucoseProduction.I_po.c,BetaCell.V,BetaCell.G_p.n,BetaCell.Y.c,adiposeTissue1.adipocyte1.V,adiposeTissue1.adipocyte1.IR.c,adiposeTissue1.adipocyte1.IRS1.c,adiposeTissue1.adipocyte1.IRS1_P.n,adiposeTissue1.adipocyte1.PKB.c,adiposeTissue1.adipocyte1.PKB_P.n,adiposeTissue1.adipocyte1.GlucoseUtilization.n,adiposeTissue1.adipocyte1.GLUT4_MEMBRANE.n,adiposeTissue1.adipocyte1.GLUT4_CYTOSOL.c,adiposeTissue1.adipocyte1.IR_insulin.n,V,adiposeTissue1.V,UtilizationMuscleTissue.V,UtilizationMuscleTissue.U_idm.n,GlucoseRenalExcretion.V,GlucoseRenalExcretion.E.n)
 * Number of discrete variables: 0 ()
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for simulation (173):
 * Single equations (assignments): 173
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 0
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 0
 * Mixed (continuous/discrete) equation systems: 0
Notification: Performance of Backend phase and start with SimCode phase: time 0.0002684/0.4396, allocations: 152.2 kB / 491.9 MB, free: 10.57 MB / 366.1 MB
Notification: Performance of simCode: created initialization part: time 0.004824/0.4445, allocations: 1.734 MB / 493.6 MB, free: 8.84 MB / 366.1 MB
Notification: Performance of simCode: created event and clocks part: time 3.396e-06/0.4445, allocations: 0 / 493.6 MB, free: 8.84 MB / 366.1 MB
Notification: Performance of simCode: created simulation system equations: time 0.001197/0.4457, allocations: 0.7572 MB / 494.4 MB, free: 8.082 MB / 366.1 MB
Notification: Performance of simCode: created of all other equations (e.g. parameter, nominal, assert, etc): time 0.001223/0.4469, allocations: 223.7 kB / 494.6 MB, free: 7.875 MB / 366.1 MB
Notification: Performance of simCode: created linear, non-linear and system jacobian parts: time 0.009209/0.4562, allocations: 5.984 MB / 0.4889 GB, free: 1.828 MB / 366.1 MB
Notification: Performance of simCode: some other stuff during SimCode phase: time 0.001131/0.4573, allocations: 1.37 MB / 0.4902 GB, free: 432 kB / 366.1 MB
Notification: Performance of simCode: all other stuff during SimCode phase: time 0.0005217/0.4579, allocations: 123.4 kB / 0.4903 GB, free: 308 kB / 366.1 MB
Notification: Performance of SimCode: time 9.22e-07/0.4579, allocations: 3.938 kB / 0.4903 GB, free: 304 kB / 366.1 MB
Notification: Performance of Templates: time 0.2546/0.7125, allocations: 18.82 MB / 0.5087 GB, free: 85.47 MB / 382.1 MB
make -j1 -f BioChem_BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel.makefile
(rm -f BioChem_BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel.pipe ; mkfifo BioChem_BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel.pipe ; head -c 1048576 < BioChem_BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel.pipe >> ../files/BioChem_BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel.sim & ./BioChem_BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel  -abortSlowSimulation -alarm=480 -lv LOG_STATS > BioChem_BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel.pipe 2>&1)